View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13000_high_4 (Length: 482)

Name: NF13000_high_4
Description: NF13000
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13000_high_4
NF13000_high_4
[»] chr8 (28 HSPs)
chr8 (2-458)||(19785024-19785502)
chr8 (1-119)||(30117901-30118017)
chr8 (13-112)||(24380608-24380707)
chr8 (13-119)||(7984851-7984957)
chr8 (2-76)||(15176676-15176750)
chr8 (13-121)||(24381581-24381689)
chr8 (12-145)||(24518841-24518974)
chr8 (13-77)||(15058758-15058822)
chr8 (1-80)||(22501609-22501688)
chr8 (1-82)||(6886442-6886523)
chr8 (1-82)||(14271614-14271695)
chr8 (2-50)||(13313492-13313540)
chr8 (1-121)||(30487580-30487700)
chr8 (13-104)||(2638470-2638561)
chr8 (2-121)||(24851178-24851296)
chr8 (2-61)||(28858630-28858689)
chr8 (13-119)||(24091551-24091657)
chr8 (10-83)||(17100450-17100523)
chr8 (2-83)||(37527268-37527349)
chr8 (13-49)||(4007407-4007443)
chr8 (13-121)||(5856515-5856622)
chr8 (13-61)||(19791188-19791236)
chr8 (5-45)||(21230735-21230775)
chr8 (2-49)||(23868074-23868121)
chr8 (10-45)||(24091128-24091163)
chr8 (5-75)||(24389536-24389606)
chr8 (12-101)||(14076876-14076965)
chr8 (18-50)||(13833863-13833895)
[»] chr7 (48 HSPs)
chr7 (1-119)||(15171006-15171124)
chr7 (274-362)||(9260103-9260192)
chr7 (274-362)||(9310102-9310191)
chr7 (2-78)||(24751441-24751517)
chr7 (1-124)||(9501743-9501866)
chr7 (382-464)||(20931544-20931626)
chr7 (13-121)||(21233837-21233945)
chr7 (2-128)||(20175821-20175947)
chr7 (290-363)||(20931473-20931547)
chr7 (13-121)||(144709-144818)
chr7 (2-82)||(9917939-9918020)
chr7 (2-82)||(9925851-9925932)
chr7 (1-82)||(13281971-13282052)
chr7 (13-80)||(8317335-8317402)
chr7 (20-119)||(10418292-10418391)
chr7 (2-121)||(15611282-15611401)
chr7 (1-119)||(1588973-1589091)
chr7 (13-119)||(9767520-9767626)
chr7 (1-83)||(10585429-10585511)
chr7 (2-76)||(25692567-25692641)
chr7 (13-82)||(21428569-21428638)
chr7 (1-88)||(8309980-8310067)
chr7 (2-76)||(3585768-3585842)
chr7 (2-71)||(10611495-10611564)
chr7 (2-75)||(11804478-11804551)
chr7 (274-355)||(20466416-20466497)
chr7 (1-121)||(6039540-6039660)
chr7 (13-121)||(7399072-7399180)
chr7 (13-135)||(3736057-3736180)
chr7 (12-82)||(1810677-1810747)
chr7 (1-103)||(19154588-19154690)
chr7 (1-103)||(20753987-20754089)
chr7 (24-78)||(23897039-23897093)
chr7 (13-121)||(5485360-5485467)
chr7 (2-50)||(26249320-26249368)
chr7 (13-87)||(3134887-3134962)
chr7 (2-49)||(8052674-8052721)
chr7 (2-49)||(17831048-17831095)
chr7 (274-363)||(22748815-22748906)
chr7 (14-120)||(5221224-5221330)
chr7 (13-103)||(9288662-9288751)
chr7 (2-64)||(10332195-10332257)
chr7 (2-35)||(1254644-1254677)
chr7 (13-70)||(9298486-9298543)
chr7 (4-45)||(23298162-23298203)
chr7 (2-38)||(4450487-4450522)
chr7 (2-50)||(14968855-14968903)
chr7 (2-50)||(15398331-15398379)
[»] chr2 (38 HSPs)
chr2 (1-135)||(17891450-17891584)
chr2 (1-121)||(27420806-27420926)
chr2 (1-83)||(11464558-11464640)
chr2 (2-83)||(28930045-28930126)
chr2 (284-363)||(9962102-9962182)
chr2 (32-119)||(45572641-45572727)
chr2 (32-119)||(45576308-45576394)
chr2 (32-119)||(45579975-45580061)
chr2 (32-119)||(45583642-45583728)
chr2 (32-119)||(45587309-45587395)
chr2 (32-119)||(45590976-45591062)
chr2 (32-119)||(45594643-45594729)
chr2 (32-119)||(45598310-45598396)
chr2 (32-119)||(45601977-45602063)
chr2 (32-119)||(45605644-45605730)
chr2 (32-119)||(45609311-45609397)
chr2 (32-119)||(45612978-45613064)
chr2 (32-119)||(45616645-45616731)
chr2 (16-119)||(36191325-36191428)
chr2 (2-49)||(21905531-21905578)
chr2 (1-76)||(22378072-22378147)
chr2 (1-119)||(25883584-25883702)
chr2 (13-83)||(29834638-29834708)
chr2 (1-82)||(24346309-24346390)
chr2 (2-83)||(28766635-28766716)
chr2 (1-70)||(34580017-34580086)
chr2 (1-70)||(34585766-34585835)
chr2 (13-121)||(22627120-22627228)
chr2 (16-88)||(32086794-32086866)
chr2 (11-73)||(18120801-18120863)
chr2 (2-64)||(27907767-27907829)
chr2 (2-47)||(29144441-29144486)
chr2 (2-50)||(18758105-18758153)
chr2 (6-82)||(32438928-32439004)
chr2 (1-79)||(29850795-29850873)
chr2 (2-74)||(17674235-17674306)
chr2 (13-49)||(20175618-20175654)
chr2 (13-45)||(25537368-25537400)
[»] chr5 (29 HSPs)
chr5 (1-121)||(26314955-26315075)
chr5 (17-136)||(24261791-24261910)
chr5 (3-128)||(24188615-24188740)
chr5 (13-121)||(26122142-26122250)
chr5 (13-121)||(24162266-24162374)
chr5 (16-119)||(17469816-17469918)
chr5 (13-82)||(24265534-24265603)
chr5 (13-82)||(24342165-24342234)
chr5 (2-82)||(18227385-18227465)
chr5 (1-81)||(18939294-18939374)
chr5 (5-49)||(24658547-24658591)
chr5 (14-121)||(23266560-23266667)
chr5 (2-64)||(23338731-23338793)
chr5 (15-128)||(28254628-28254741)
chr5 (1-121)||(19761823-19761943)
chr5 (2-50)||(23387791-23387839)
chr5 (52-120)||(24849782-24849850)
chr5 (12-135)||(26253190-26253313)
chr5 (1-103)||(18831974-18832076)
chr5 (5-47)||(20860147-20860189)
chr5 (1-94)||(25572705-25572798)
chr5 (13-70)||(25920617-25920674)
chr5 (5-37)||(19052919-19052951)
chr5 (25-73)||(20532752-20532800)
chr5 (274-355)||(18767859-18767942)
chr5 (2-49)||(28666297-28666344)
chr5 (2-76)||(29987734-29987808)
chr5 (2-35)||(24320768-24320801)
chr5 (2-50)||(23032482-23032530)
[»] chr3 (28 HSPs)
chr3 (1-119)||(22470648-22470766)
chr3 (1-102)||(22246750-22246851)
chr3 (5-136)||(8448520-8448651)
chr3 (13-119)||(18735525-18735631)
chr3 (13-82)||(20891898-20891967)
chr3 (2-90)||(3114953-3115041)
chr3 (13-103)||(820100-820190)
chr3 (1-75)||(13906826-13906900)
chr3 (13-119)||(20886605-20886711)
chr3 (3-103)||(23054821-23054921)
chr3 (3-83)||(34276685-34276765)
chr3 (1-80)||(5509844-5509923)
chr3 (1-104)||(19388093-19388196)
chr3 (13-71)||(3429478-3429536)
chr3 (1-119)||(28326376-28326494)
chr3 (2-129)||(17134818-17134944)
chr3 (13-83)||(31284551-31284621)
chr3 (2-71)||(16242436-16242505)
chr3 (2-103)||(18466941-18467042)
chr3 (13-49)||(11636229-11636265)
chr3 (2-74)||(18747602-18747673)
chr3 (6-78)||(19912355-19912427)
chr3 (2-82)||(23637386-23637465)
chr3 (10-45)||(18457362-18457397)
chr3 (12-119)||(27853169-27853276)
chr3 (2-76)||(2166280-2166354)
chr3 (1-37)||(6075789-6075825)
chr3 (19-87)||(20431238-20431306)
[»] chr4 (32 HSPs)
chr4 (1-120)||(9849950-9850070)
chr4 (4-119)||(25024843-25024957)
chr4 (6-82)||(17277619-17277695)
chr4 (1-120)||(16669964-16670083)
chr4 (13-116)||(26114456-26114559)
chr4 (1-122)||(23083434-23083555)
chr4 (1-83)||(22350481-22350563)
chr4 (2-76)||(8968316-8968390)
chr4 (1-119)||(10236325-10236443)
chr4 (2-76)||(16928702-16928776)
chr4 (2-103)||(15047525-15047626)
chr4 (2-103)||(15106798-15106899)
chr4 (1-104)||(5691506-5691609)
chr4 (17-80)||(22345852-22345915)
chr4 (274-363)||(15849073-15849163)
chr4 (13-82)||(19094019-19094088)
chr4 (2-82)||(19883722-19883802)
chr4 (2-49)||(11252372-11252419)
chr4 (12-67)||(22527733-22527788)
chr4 (16-76)||(11782258-11782318)
chr4 (1-61)||(19927068-19927128)
chr4 (2-61)||(9263562-9263621)
chr4 (2-49)||(15166273-15166320)
chr4 (5-76)||(17711084-17711155)
chr4 (2-121)||(18447683-18447802)
chr4 (15-82)||(19547308-19547375)
chr4 (55-121)||(12836304-12836370)
chr4 (1-69)||(37741385-37741452)
chr4 (2-82)||(10108020-10108100)
chr4 (6-50)||(16714457-16714501)
chr4 (15-83)||(22217250-22217318)
chr4 (1-37)||(25096118-25096153)
[»] chr1 (34 HSPs)
chr1 (1-121)||(16114534-16114654)
chr1 (17-129)||(21848358-21848470)
chr1 (1-88)||(9783223-9783310)
chr1 (274-351)||(10785844-10785922)
chr1 (13-119)||(15571944-15572050)
chr1 (2-121)||(20033362-20033481)
chr1 (1-103)||(12011427-12011529)
chr1 (5-79)||(15542556-15542630)
chr1 (1-74)||(24282782-24282855)
chr1 (2-76)||(13267623-13267697)
chr1 (1-103)||(15811688-15811790)
chr1 (2-76)||(21663335-21663409)
chr1 (5-103)||(23035166-23035264)
chr1 (12-101)||(17543369-17543458)
chr1 (1-78)||(26647599-26647676)
chr1 (13-119)||(16113267-16113373)
chr1 (13-119)||(18100031-18100137)
chr1 (2-104)||(25959702-25959803)
chr1 (1-71)||(27911848-27911918)
chr1 (1-61)||(7881587-7881648)
chr1 (13-82)||(33192124-33192193)
chr1 (1-82)||(44796890-44796971)
chr1 (10-70)||(15159041-15159101)
chr1 (4-119)||(16363358-16363473)
chr1 (1-103)||(15527039-15527141)
chr1 (13-83)||(16180490-16180560)
chr1 (2-76)||(21333312-21333386)
chr1 (2-47)||(14782337-14782382)
chr1 (13-82)||(26101632-26101701)
chr1 (13-82)||(35133657-35133726)
chr1 (2-74)||(9403120-9403192)
chr1 (5-37)||(9666869-9666901)
chr1 (13-61)||(16786349-16786397)
chr1 (15-82)||(17017090-17017155)
[»] chr6 (28 HSPs)
chr6 (13-130)||(23644573-23644690)
chr6 (13-140)||(22564802-22564928)
chr6 (1-119)||(9898111-9898229)
chr6 (1-104)||(8246377-8246480)
chr6 (12-82)||(3357915-3357985)
chr6 (2-79)||(22404498-22404575)
chr6 (3-82)||(6629219-6629298)
chr6 (274-393)||(16449519-16449644)
chr6 (1-83)||(8038294-8038376)
chr6 (1-119)||(19246012-19246130)
chr6 (1-134)||(32759690-32759823)
chr6 (15-82)||(10822010-10822077)
chr6 (16-75)||(23005521-23005580)
chr6 (16-75)||(23782786-23782845)
chr6 (19-73)||(21547028-21547082)
chr6 (4-61)||(17295932-17295989)
chr6 (13-61)||(13216561-13216609)
chr6 (5-36)||(14639109-14639140)
chr6 (2-49)||(21845942-21845989)
chr6 (1-104)||(22569607-22569709)
chr6 (2-56)||(8066450-8066504)
chr6 (1-75)||(34479905-34479979)
chr6 (13-82)||(2588069-2588137)
chr6 (13-73)||(12991473-12991533)
chr6 (12-45)||(13022128-13022161)
chr6 (13-106)||(21060658-21060751)
chr6 (13-106)||(21079975-21080068)
chr6 (2-50)||(9387422-9387470)
[»] scaffold1339 (1 HSPs)
scaffold1339 (53-215)||(927-1089)
[»] scaffold0043 (1 HSPs)
scaffold0043 (13-119)||(88691-88797)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-82)||(202075-202156)
[»] scaffold0062 (1 HSPs)
scaffold0062 (1-83)||(41778-41860)
[»] scaffold0451 (1 HSPs)
scaffold0451 (4-103)||(10338-10437)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-104)||(41089-41192)
[»] scaffold0111 (1 HSPs)
scaffold0111 (2-75)||(21256-21329)
[»] scaffold0016 (1 HSPs)
scaffold0016 (2-50)||(4629-4677)
[»] scaffold0386 (2 HSPs)
scaffold0386 (27-78)||(9380-9431)
scaffold0386 (1-119)||(5078-5196)
[»] scaffold0360 (1 HSPs)
scaffold0360 (13-103)||(16721-16811)
[»] scaffold0086 (2 HSPs)
scaffold0086 (13-61)||(11887-11935)
scaffold0086 (2-121)||(13037-13156)
[»] scaffold0136 (1 HSPs)
scaffold0136 (13-119)||(14042-14148)
[»] scaffold0085 (1 HSPs)
scaffold0085 (2-35)||(23822-23855)
[»] scaffold0072 (1 HSPs)
scaffold0072 (2-126)||(38020-38144)
[»] scaffold0001 (1 HSPs)
scaffold0001 (87-143)||(392941-392997)


Alignment Details
Target: chr8 (Bit Score: 295; Significance: 1e-165; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 2 - 458
Target Start/End: Original strand, 19785024 - 19785502
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 101  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||||||| |||||||||||||| ||||||    
T  19785024 ttgggaagatgaagaatgaagattcaagaggcctcataagactttacgacgggagaaattttgttcccaaattccaaggcaatttacatagaagcaaaca 19785123  T
Q  102 cctaacaaggcgaagaaacagacatttcggcacccgaaattcgcactcatgcgccctggggatgaaaccacgtgct-ggaccatggagcaaccaggcaca 200  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| | ||| |||||||||||||||||||||||    
T  19785124 cctaacaaggggaagaaacagacatttcggcacccggaattcgcactcatgcgccttggggatgaaaccatgcgcttggaccatggagcaaccaggcaca 19785223  T
Q  201 tgtgcctggcgcatgta---------------------ggcggtgtaagttgcaaggcacatgctcctcggggatgttctatgtaacaatccaatttagg 279  Q
    ||| ||||||||||| |                     |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |    
T  19785224 tgtacctggcgcatggaaaggtgctccaggcgcatggaggcggtgtaagttgcaaggcacatgcgcctcgaggatgttctatgtaacaatccaatttaag 19785323  T
Q  280 attatatttatttaattgctttattaactatttaattgttggcgtgttatatttgttagttaattgggttttagagtaattaagtattttggtgtcgagg 379  Q
    ||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19785324 attttatttatttaattgctttattaattatttaattgttggtgtgttatatttgttagttaattgggttttagagtaattaagtattttggtatcgagg 19785423  T
Q  380 agtaagggtaatttagtcatttttgtgtgaagggtatttgaggagtttttcgtatggagagtaattaagaaaattggta 458  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||||||| |||||||||    
T  19785424 agtaagggtaatttagttatttttgtgtgaagggtatttgaggaatttttggtatggaaagtaattaaggaaattggta 19785502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 30117901 - 30118017
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  |||||||||||||||||||||||||||||||||| ||| |||||  ||| || || ||||||||||||||  |||||| ||| |||||    
T  30117901 cttgggaagatgaagaatgaagattcaagaggcctcaaaagactttgcaaagggag--attctgttctcaagttccaagacatcttacattgaagcaaac 30117998  T
Q  101 acctaacaaggcgaagaaa 119  Q
    |||||| ||||| ||||||    
T  30117999 acctaaaaaggcaaagaaa 30118017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 24380608 - 24380707
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    ||||||||||||||||||||||||| ||||||| |||| |  || |||| || |||||||||| ||||||  |||||||||| ||||||||||| |||||    
T  24380608 aagaatgaagattcaagaggcctcagaagacttcacaaagcaaggaattatgttcccaagttcaaagacatcttacatagaagcaaacacctaaaaaggc 24380707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 7984957 - 7984851
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||| |||| || ||| |||||||||||||  |||||| |||  ||||| ||||  ||||    
T  7984957 aagaatgaagattcaagaggcatcataagactttacaatgggaggaattatgttccaaagttccaagacatcttacattgaagaaaacatctaaataggc 7984858  T
Q  113 gaagaaa 119  Q
    |||||||    
T  7984857 gaagaaa 7984851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 15176676 - 15176750
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 76  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||  ||||| |||| || |||||||||||    
T  15176676 ttgggaagacaaagaatgaagattcaagaggcctcaggagactttacatagggaggaattctgttcccaagttcc 15176750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 24381581 - 24381689
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    ||||||||||||||||||| ||||| ||||| |||||| || || ||||||| |||||||||||||||||  ||||||| ||  ||||||| || ||| |    
T  24381581 aagaatgaagattcaagagtcctcagaagacattacaaaggaaggaattttgttcccaagttccaagacatcttacatataagaaaacacccaaaaagac 24381680  T
Q  113 gaagaaaca 121  Q
     ||||||||    
T  24381681 aaagaaaca 24381689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 24518841 - 24518974
Alignment:
Q  12 aaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaagg 111  Q
    |||||||||||||| ||||||||||| ||||| |||||  | ||| ||||| | |||||||||||||||||  ||| || ||| |||||||| || |||     
T  24518841 aaagaatgaagatttaagaggcctcagaagacattacagagagaggaatttagttcccaagttccaagacatcttatatggaagcaaacacccaaaaaga 24518940  T
Q  112 cgaagaaacagacatttcggcacccgaaattcgc 145  Q
    |||| |||||  |||||| |||||| || |||||    
T  24518941 cgaaaaaacaagcatttcagcacccaaacttcgc 24518974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 15058758 - 15058822
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcca 77  Q
    |||||||||||||||||||| |||| ||||| ||||||  |||||||||||| ||||||||||||    
T  15058758 aagaatgaagattcaagaggtctcagaagacgttacaaatggagaaattttgttcccaagttcca 15058822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 22501688 - 22501609
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaaga 80  Q
    ||||||||||| || | |||||||||||||||||||| ||||| |||||  ||||| |||| || |||||||||||||||    
T  22501688 cttgggaagacgaatattgaagattcaagaggcctcagaagacattacagagggaggaattctgttcccaagttccaaga 22501609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6886523 - 6886442
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    ||||||||||| |||| | |||||||||||||| ||| ||||| ||| |  |||||||||| || |||||||||||||||||    
T  6886523 cttgggaagacgaagattaaagattcaagaggcatcataagacgttatagagggagaaattctgttcccaagttccaagaca 6886442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14271695 - 14271614
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    ||||| |||||||||| ||||||||||| |||||||| ||||| |||||  ||||| |||| || || ||||||||||||||    
T  14271695 cttggcaagacaaagattgaagattcaataggcctcagaagacgttacatagggaggaattatgttctcaagttccaagaca 14271614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 13313492 - 13313540
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 50  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  13313492 ttgggaagaccaagaatgaatattcaagagacctcaaaagactttacaa 13313540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 30487700 - 30487580
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  ||||||||||||||||||||||||||||||  || ||  ||||  |||| |  |||||||||||||||||  ||| | | || |||||    
T  30487700 cttgggaagatgaagaatgaagattcaagaggcctcaaaagatgttgcagagggatgaattctattcccaagttccaagacatcttatagataagcaaac 30487601  T
Q  101 acctaacaaggcgaagaaaca 121  Q
    ||| || ||||| ||||||||    
T  30487600 acccaaaaaggcaaagaaaca 30487580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 2638561 - 2638470
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacct 104  Q
    |||| ||||||||||||||||||||||||| |||||||  ||| ||||| || || |||||||||| |||  |||||| |||  ||||||||    
T  2638561 aagagtgaagattcaagaggcctcaaaagaatttacaaatggataaattctgttctcaagttccaatacatcttacattgaagaaaacacct 2638470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 24851178 - 24851296
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 101  Q
    |||||||||  | ||||||||||||||||| ||||| ||||| ||||||  ||| |||||||| ||||  || ||||||||  |||||| ||| ||||||    
T  24851178 ttgggaagatcatgaatgaagattcaagagacctcagaagacattacaaaaggataaattttgttcccgggtcccaagacatcttacatggaagcaaaca 24851277  T
Q  102 cctaacaaggcgaagaaaca 121  Q
    | ||| ||| ||||||||||    
T  24851278 cttaa-aagacgaagaaaca 24851296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 28858689 - 28858630
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaatt 61  Q
    |||||||||  ||||||||| |||||||||||||||||||| ||||| | ||||||||||    
T  28858689 ttgggaagatcaagaatgaatattcaagaggcctcaaaagattttacgaagggagaaatt 28858630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 24091657 - 24091551
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    |||||| |||||||||||||||| | | |||||||||| ||||| || | || |||| |||||||||||| ||||| | |||  |||||||| |  ||||    
T  24091657 aagaataaagattcaagaggccttagatgactttacaaagggaggaactctgttccctagttccaagacattttactttgaagaaaacacctcatcaggc 24091558  T
Q  113 gaagaaa 119  Q
    |||||||    
T  24091557 gaagaaa 24091551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 17100450 - 17100523
Alignment:
Q  10 acaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 83  Q
    ||||||||||||||||||||||||||||  ||||||   || ||||| |||| |  ||||||||||||||||||    
T  17100450 acaaagaatgaagattcaagaggcctcacgagacttacaaatgggaggaattctattcccaagttccaagacaa 17100523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 37527268 - 37527349
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 83  Q
    |||||||||  ||||||||||||||||||||||| | ||||||||||    |||| ||||||| ||||||  ||||||||||    
T  37527268 ttgggaagatgaagaatgaagattcaagaggcctaagaagactttactcatggaggaattttgttcccaatgtccaagacaa 37527349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 4007407 - 4007443
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttaca 49  Q
    ||||||||||||||||| |||||||||||||||||||    
T  4007407 aagaatgaagattcaaggggcctcaaaagactttaca 4007443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 5856622 - 5856515
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    ||||||||||||||||||||||||  || |  |||||  ||||||| | ||| |||||||||||||| ||  ||||||| || |||||||| || |||||    
T  5856622 aagaatgaagattcaagaggcctcggaacatgttacagagggagaattcttgttcccaagttccaagtcatcttacataaaagcaaacacccaa-aaggc 5856524  T
Q  113 gaagaaaca 121  Q
    |||| ||||    
T  5856523 gaagcaaca 5856515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 19791236 - 19791188
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaatt 61  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||| ||||    
T  19791236 aagaatgaagattcaataggcctcaaaagattttgcaacgggaggaatt 19791188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 21230775 - 21230735
Alignment:
Q  5 ggaagacaaagaatgaagattcaagaggcctcaaaagactt 45  Q
    ||||||| |||||||||||||||||||||||||| ||||||    
T  21230775 ggaagaccaagaatgaagattcaagaggcctcaagagactt 21230735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 23868074 - 23868121
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 49  Q
    |||||||||| |||||||||||||||||||| ||||  ||||||||||    
T  23868074 ttgggaagaccaagaatgaagattcaagagggctcaggagactttaca 23868121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 24091128 - 24091163
Alignment:
Q  10 acaaagaatgaagattcaagaggcctcaaaagactt 45  Q
    |||||||||||||||||||||||||||| |||||||    
T  24091128 acaaagaatgaagattcaagaggcctcagaagactt 24091163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 24389606 - 24389536
Alignment:
Q  5 ggaagacaaagaatgaagattcaagaggcctcaaaagactttacaac-gggagaaattttgctcccaagttc 75  Q
    ||||||| |||||||||||||||||||||||||  |||| ||||||| ||||| ||||||| | ||||||||    
T  24389606 ggaagaccaagaatgaagattcaagaggcctcaggagac-ttacaacagggagtaattttgtttccaagttc 24389536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 14076965 - 14076876
Alignment:
Q  12 aaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 101  Q
    |||||||||||||||||||||||| | || |  |||||| ||||| ||||| | | |||| ||||||||||  ||| |||||| ||||||    
T  14076965 aaagaatgaagattcaagaggccttagaaaatattacaaagggaggaatttcgttaccaaattccaagacatcttatatagaagcaaaca 14076876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 13833863 - 13833895
Alignment:
Q  18 tgaagattcaagaggcctcaaaagactttacaa 50  Q
    |||||||||||||||||||| ||||||||||||    
T  13833863 tgaagattcaagaggcctcataagactttacaa 13833895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 6e-32; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 15171006 - 15171124
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  ||||||||||||||||||||||||| |||||||||||| ||||| ||||||| ||| |||||||||||||  |||||||||  |||||    
T  15171006 cttgggaagatgaagaatgaagattcaagaggcctcagaagactttacaaagggaggaattttgttcctaagttccaagacatcttacatagaggcaaac 15171105  T
Q  101 acctaacaaggcgaagaaa 119  Q
    |||||| ||||||||||||    
T  15171106 acctaaaaaggcgaagaaa 15171124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 274 - 362
Target Start/End: Complemental strand, 9260192 - 9260103
Alignment:
Q  274 tttaggattatatttatttaattgctttattaactatttaattg-ttggcgtgttatatttgttagttaattgggttttagagtaattaa 362  Q
    |||| |||| ||||||||||||||||||||||| |||||||||| |||| |||||||||||||| ||||||||| |||||||| ||||||    
T  9260192 tttaagattttatttatttaattgctttattaattatttaattgtttggtgtgttatatttgttggttaattggattttagagaaattaa 9260103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 274 - 362
Target Start/End: Original strand, 9310102 - 9310191
Alignment:
Q  274 tttaggattatatttatttaattgctttattaactatttaattg-ttggcgtgttatatttgttagttaattgggttttagagtaattaa 362  Q
    |||| |||| ||||||||||||||||||||||| |||||||||| |||| |||||||||||||| ||||||||| |||||||| ||||||    
T  9310102 tttaagattttatttatttaattgctttattaattatttaattgtttggtgtgttatatttgttggttaattggattttagagaaattaa 9310191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 24751441 - 24751517
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaa 78  Q
    |||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||| |||||| ||||||    
T  24751441 ttgggaagacaatgaatgaagattcaagaggcctcagaagacattacaaagggagaaattttgttcccaatttccaa 24751517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 9501866 - 9501743
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    |||||||||| ||||||||||||||||||||||||||||| |  |||||  ||||| |||| || | |||||| ||||||||  |||||||||| |||||    
T  9501866 cttgggaagataaagaatgaagattcaagaggcctcaaaatatgttacagagggaggaattatgtttccaagtgccaagacatcttacatagaagcaaac 9501767  T
Q  101 acctaacaaggcgaagaaacagac 124  Q
    |||||| |||| ||| ||| ||||    
T  9501766 acctaaaaaggtgaataaatagac 9501743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 382 - 464
Target Start/End: Original strand, 20931544 - 20931626
Alignment:
Q  382 taagggtaatttagtcatttttgtgtgaagggtatttgaggagtttttcgtatggagagtaattaagaaaattggtaataact 464  Q
    ||||||||||||||||||||| ||||||| |||||||||| | ||||  |||||||||||||||||| ||||||||| |||||    
T  20931544 taagggtaatttagtcattttagtgtgaatggtatttgagtaattttgggtatggagagtaattaaggaaattggtagtaact 20931626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 21233945 - 21233837
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    |||||||||||||||||||| || |||||||||||||| | ||| | || || ||| |||||||||||||  || ||||||| ||||||||| | |||||    
T  21233945 aagaatgaagattcaagaggtcttaaaagactttacaaagcgaggagttatgttcctaagttccaagacatcttgcatagaagcaaacaccttagaaggc 21233846  T
Q  113 gaagaaaca 121  Q
    |||||||||    
T  21233845 gaagaaaca 21233837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 20175947 - 20175821
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 101  Q
    |||||||||  | ||||||||||||||||||||||  |||||  ||||| ||||| |||| || ||||||||| |||||||  |||||| ||| ||||||    
T  20175947 ttgggaagatcatgaatgaagattcaagaggcctcggaagacaatacaaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaaca 20175848  T
Q  102 cctaacaaggcgaagaaacagacattt 128  Q
    ||||| |||  ||||||||| ||||||    
T  20175847 cctaaaaagatgaagaaacatacattt 20175821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 20931473 - 20931547
Alignment:
Q  290 tttaattgctttattaactatttaattgtt-ggcgtgttatatttgttagttaattgggttttagagtaattaag 363  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||| |||| |||||||||||| ||||||||    
T  20931473 tttaattgctttattaattatttaattgtttggtgtgttatatttgttggttagttgggttttagaataattaag 20931547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 144818 - 144709
Alignment:
Q  13 aagaatgaagattcaagagg-cctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaagg 111  Q
    ||||| |||||||||||| | ||||  |||||||| |||  |||| |||| || ||||||||||||||||||||||||||||| |||| |||||| ||||    
T  144818 aagaaagaagattcaagaagacctcggaagacttttcaaatggaggaattatgttcccaagttccaagacaatttacatagaagcaaatacctaaaaagg 144719  T
Q  112 cgaagaaaca 121  Q
    | ||||||||    
T  144718 caaagaaaca 144709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 9918020 - 9917939
Alignment:
Q  2 ttgggaaga-caaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||  ||||||||||||| ||| | |||| ||||||    
T  9918020 ttgggaagatcaaagaatgaagattcaagaggcctcaaaagacattacatagggagaaattttgttcctaggttcaaagaca 9917939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 9925932 - 9925851
Alignment:
Q  2 ttgggaaga-caaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||  ||||||||||||| ||| | |||| ||||||    
T  9925932 ttgggaagatcaaagaatgaagattcaagaggcctcaaaagacattacatagggagaaattttgttcctaggttcaaagaca 9925851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13281971 - 13282052
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    |||||||| || | ||||||||||||||||||||||||||||  |||||| ||||| ||||||| |||||||| ||||||||    
T  13281971 cttgggaaaaccatgaatgaagattcaagaggcctcaaaagatattacaaagggaggaattttgttcccaagtcccaagaca 13282052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 8317335 - 8317402
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaaga 80  Q
    ||||||||| ||||||||||||||||||||||||| |  |||| |||||||| |||||||||||||||    
T  8317335 aagaatgaaaattcaagaggcctcaaaagactttatagagggataaattttgttcccaagttccaaga 8317402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 10418391 - 10418292
Alignment:
Q  20 aagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 119  Q
    |||||||||||| ||||| ||||||||||||  ||||||||| || |||||||||||||||||  |||||  ||| ||||||| ||| ||| ||||||||    
T  10418391 aagattcaagagacctcagaagactttacaaaaggagaaattatgttcccaagttccaagacatcttacactgaagcaaacacttaaaaagacgaagaaa 10418292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 15611282 - 15611401
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 101  Q
    |||||||||  || |||| || |||||||||||| ||||||| |||||  |||||||||| || |||||| ||||||||||  ||| |||||| ||||||    
T  15611282 ttgggaagatgaataatgtaggttcaagaggcctaaaaagacgttacagagggagaaattatgttcccaaattccaagacatcttatatagaagcaaaca 15611381  T
Q  102 cctaacaaggcgaagaaaca 121  Q
    || || |||| |||||||||    
T  15611382 cccaaaaaggtgaagaaaca 15611401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 1589091 - 1588973
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  |||||||||||||||| | |||||| |||||||||||   |||| |||| || |||||||||||||||||  |||||| |||  ||||    
T  1589091 cttgggaagatgaagaatgaagattcaacatgcctcagaagactttacagaaggaggaattatgttcccaagttccaagacatcttacattgaagaaaac 1588992  T
Q  101 acctaacaaggcgaagaaa 119  Q
    |||||  || |||||||||    
T  1588991 acctataaaagcgaagaaa 1588973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 9767626 - 9767520
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    ||||||||||||||||||||| ||| |||||||||||  ||||| |||| || ||| |||||||||||||  |||||  |||  |||||||||| ||||     
T  9767626 aagaatgaagattcaagaggcatcagaagactttacagggggaggaattatgttcctaagttccaagacatcttacaatgaacaaaacacctaaaaaggt 9767527  T
Q  113 gaagaaa 119  Q
    |||||||    
T  9767526 gaagaaa 9767520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10585429 - 10585511
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 83  Q
    ||||||||||  |||||||||||||||| ||| |||| |||||||||||| ||||| ||||||| ||| ||||| ||||||||    
T  10585429 cttgggaagatgaagaatgaagattcaaaaggtctcagaagactttacaaagggaggaattttgttcctaagtttcaagacaa 10585511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 25692641 - 25692567
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 76  Q
    |||||||||  || |||||||||||||||||||||| |||||||||||| ||||| |||| || |||||||||||    
T  25692641 ttgggaagatcaaaaatgaagattcaagaggcctcagaagactttacaatgggaggaattatgttcccaagttcc 25692567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 21428638 - 21428569
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    |||||||||||||||||||||||||||||||||||||   |||| |||| |  |||||||||||||||||    
T  21428638 aagaatgaagattcaagaggcctcaaaagactttacagatggaggaattctattcccaagttccaagaca 21428569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 8309980 - 8310067
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttac 88  Q
    ||||||||||  ||||||||||||||||||||||||| ||||||||| |  || || |||| || ||||| ||||||||||| |||||    
T  8309980 cttgggaagatgaagaatgaagattcaagaggcctcataagactttagagaggaaggaattctgttcccatgttccaagacattttac 8310067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 3585768 - 3585842
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 76  Q
    |||||||||  |||||||||||||||||||| |||| |||||||||||| ||||| |||| || ||||| |||||    
T  3585768 ttgggaagaataagaatgaagattcaagaggtctcagaagactttacaatgggaggaattatgttcccatgttcc 3585842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 10611564 - 10611495
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaa 71  Q
    |||||||||| |||||| ||||||||||||| ||||  ||||||||||  ||||||||||||| ||||||    
T  10611564 ttgggaagactaagaataaagattcaagaggtctcatgagactttacatagggagaaattttgttcccaa 10611495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 11804551 - 11804478
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttc 75  Q
    ||||||||||||||||||||||||||| ||| || | |||||||||||  || |||||||||| | ||||||||    
T  11804551 ttgggaagacaaagaatgaagattcaaaaggacttagaagactttacataggaagaaattttgtttccaagttc 11804478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 355
Target Start/End: Complemental strand, 20466497 - 20466416
Alignment:
Q  274 tttaggattatatttatttaattgctttattaactatttaattgttggcgtgttatatttgttagttaattgggttttagag 355  Q
    ||||||||| |||||||||||||| |||||| |  |||| ||| |||| ||||||||||||||||||| |||| || |||||    
T  20466497 tttaggattttatttatttaattgttttatttaaaattttatttttggtgtgttatatttgttagttatttggattatagag 20466416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 6039540 - 6039660
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    |||||||||| |||||||||||||||||||||||||| || || |||||  ||||  || | || |||| ||||| ||||||  |||||| ||| |||||    
T  6039540 cttgggaagataaagaatgaagattcaagaggcctcataataccttacagagggacgaactatgttcccgagttctaagacatcttacattgaaacaaac 6039639  T
Q  101 acctaacaaggcgaagaaaca 121  Q
    |||| |  ||| |||||||||    
T  6039640 accttaacaggtgaagaaaca 6039660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 7399180 - 7399072
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    |||||| ||||||||||||||||   |||||||||| | ||||| |||| || ||||| ||||||||| || |||||||||| || | |||  | |||||    
T  7399180 aagaataaagattcaagaggcctatgaagactttacgaagggaggaattgtgttcccatgttccaagaaaacttacatagaagcagataccggaaaaggc 7399081  T
Q  113 gaagaaaca 121  Q
    |||||||||    
T  7399080 gaagaaaca 7399072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 3736180 - 3736057
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    |||||||||||||||||||||||||  ||||| ||||  ||||| |||| || || ||| ||||||||||  |||||| |||  |||||||| |  ||||    
T  3736180 aagaatgaagattcaagaggcctcaggagactatacagagggaggaattctgttctcaatttccaagacatcttacattgaagaaaacacctcaacaggc 3736081  T
Q  113 gaag-aaacagacatttcggcacc 135  Q
     ||| ||||||||||||| |||||    
T  3736080 aaagaaaacagacatttcagcacc 3736057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 1810747 - 1810677
Alignment:
Q  12 aaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    ||||||||| ||||||||| |||||| || | ||||||| | |||||||| || |||||||||||||||||    
T  1810747 aaagaatgaggattcaagaagcctcataataatttacaaagagagaaattatgttcccaagttccaagaca 1810677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 19154690 - 19154588
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||| |||| | ||||||||| |||||||| ||||| |||||   ||||||||| || |||||||||| ||||||  |||||| |||  ||||    
T  19154690 cttgggaagacgaagatttaagattcaaaaggcctcagaagacattacagaaggagaaattctgttcccaagttctaagacatcttacattgaagaaaac 19154591  T
Q  101 acc 103  Q
    |||    
T  19154590 acc 19154588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 20754089 - 20753987
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||| |||| | ||||||||| |||||||| ||||| |||||   ||||||||| || |||||||||| ||||||  |||||| |||  ||||    
T  20754089 cttgggaagacgaagatttaagattcaaaaggcctcagaagacattacagaaggagaaattctgttcccaagttctaagacatcttacattgaagaaaac 20753990  T
Q  101 acc 103  Q
    |||    
T  20753989 acc 20753987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 23897093 - 23897039
Alignment:
Q  24 ttcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaa 78  Q
    |||||||||||||||||||||||| || ||||| |||| || |||||||||||||    
T  23897093 ttcaagaggcctcaaaagactttataaagggaggaattctgttcccaagttccaa 23897039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 5485467 - 5485360
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    ||||||||||||| ||  || |||||||||| |||||  ||||  ||||||  |||||||||||||||||  |||||| ||| |||||||| || ||| |    
T  5485467 aagaatgaagatttaaatggtctcaaaagacgttacagagggaagaattttattcccaagttccaagacatcttacatggaagcaaacacccaa-aagac 5485369  T
Q  113 gaagaaaca 121  Q
    |||||||||    
T  5485368 gaagaaaca 5485360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 26249320 - 26249368
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 50  Q
    |||||||||| ||||||||||||||||||||| |||  |||||||||||    
T  26249320 ttgggaagaccaagaatgaagattcaagaggcttcaggagactttacaa 26249368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 3134887 - 3134962
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctccc-aagttccaagacaattta 87  Q
    ||||||||||||||| ||||||||| ||||||| | || ||||| ||||||| |||| ||||||| || |||||||    
T  3134887 aagaatgaagattcaggaggcctcataagacttaataatgggaggaattttgttcccaaagttccgaggcaattta 3134962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 8052674 - 8052721
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 49  Q
    |||||||||| || ||||||||||||| ||||||||| ||||||||||    
T  8052674 ttgggaagaccaaaaatgaagattcaacaggcctcaagagactttaca 8052721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 17831095 - 17831048
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 49  Q
    |||||||||  ||||||||||||||||||||| ||| |||||||||||    
T  17831095 ttgggaagatcaagaatgaagattcaagaggcttcagaagactttaca 17831048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 363
Target Start/End: Original strand, 22748815 - 22748906
Alignment:
Q  274 tttaggattatatttatttaattgctttattaactatttaattg-ttggcgtgttatatttgtt-agttaattgggttttagagtaattaag 363  Q
    ||||||||  ||||||||||||||||||||||  |||||||||| |||  ||||| || |||||  | |||||||||||||||| |||||||    
T  22748815 tttaggatattatttatttaattgctttattatttatttaattgtttgatgtgttttaattgttgggctaattgggttttagagaaattaag 22748906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 5221224 - 5221330
Alignment:
Q  14 agaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcg 113  Q
    |||||||||||||||||    ||| ||||| ||||||  |||| |||| || |||||||||||| | || ||||||||||| ||||||||  | |||||     
T  5221224 agaatgaagattcaagaaaattcataagacgttacaaatggaggaattctgttcccaagttccaggtcactttacatagaagcaaacacccgaaaaggca 5221323  T
Q  114 aagaaac 120  Q
    |||||||    
T  5221324 aagaaac 5221330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 9288751 - 9288662
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacc 103  Q
    |||||||||| |||||||||||||| |||||||||||  |||| || ||||| |||| || |||||||||  ||| || ||| ||||||||    
T  9288751 aagaatgaaggttcaagaggcctcataagactttacagagggataagttttgttccc-aggtccaagacatcttatatggaagcaaacacc 9288662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 10332257 - 10332195
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttg 64  Q
    |||||||||  ||||||||||||||||||||||| | || || |||||  |||||||||||||    
T  10332257 ttgggaagatcaagaatgaagattcaagaggccttagaacacgttacagagggagaaattttg 10332195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 1254677 - 1254644
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcct 35  Q
    ||||||||||| ||||||||||||||||||||||    
T  1254677 ttgggaagacacagaatgaagattcaagaggcct 1254644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 9298543 - 9298486
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctccca 70  Q
    |||||||||| |||||||||||||| |||||||||||  |||| || ||||| |||||    
T  9298543 aagaatgaaggttcaagaggcctcataagactttacagagggataagttttgttccca 9298486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 23298203 - 23298162
Alignment:
Q  4 gggaagacaaagaatgaagattcaagaggcctcaaaagactt 45  Q
    ||||||| ||| |||||||||||||||||||||| |||||||    
T  23298203 gggaagaaaaataatgaagattcaagaggcctcagaagactt 23298162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 4450522 - 4450487
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaa 38  Q
    ||||||||||||| |||||||||||||||||||||||    
T  4450522 ttgggaagacaaa-aatgaagattcaagaggcctcaa 4450487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 14968855 - 14968903
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 50  Q
    |||||||||||| | |||| ||||||||||||||| |||||| ||||||    
T  14968855 ttgggaagacaacggatgatgattcaagaggcctccaaagacattacaa 14968903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 15398331 - 15398379
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 50  Q
    |||||||||||| | |||| ||||||||||||||| |||||| ||||||    
T  15398331 ttgggaagacaacggatgatgattcaagaggcctccaaagacattacaa 15398379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 6e-32; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 17891584 - 17891450
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  ||||||||||||||||||||||||| |||| |||||||  |||| |||| || || ||||||||||||||| |||||||||| |||||    
T  17891584 cttgggaagatgaagaatgaagattcaagaggcctcataagaatttacaaaaggaggaattatgttctcaagttccaagacaacttacatagaagcaaac 17891485  T
Q  101 acctaacaaggcgaagaaacagacatttcggcacc 135  Q
    |||||| ||||||||||||||  ||||| ||||||    
T  17891484 acctaaaaaggcgaagaaacatgcattttggcacc 17891450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 27420926 - 27420806
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  ||||||||||||||||| ||||||| ||||| |||||| || || || | || | |||||||||||||||  |||||||||| |||||    
T  27420926 cttgggaagatgaagaatgaagattcaagtggcctcagaagacattacaagggaaggaagtatgtttccaagttccaagacatcttacatagaagcaaac 27420827  T
Q  101 acctaacaaggcgaagaaaca 121  Q
    ||| || ||||||||||||||    
T  27420826 acccaaaaaggcgaagaaaca 27420806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 11464558 - 11464640
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 83  Q
    ||||||||||  ||||||||||||||||||||||||||||||||| |||| ||||| |||| |  ||||||||||||||||||    
T  11464558 cttgggaagatgaagaatgaagattcaagaggcctcaaaagacttaacaaagggaggaattctattcccaagttccaagacaa 11464640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 28930126 - 28930045
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 83  Q
    |||||||||| ||||||||| ||||||||||||||| |||||||||||   |||| ||||||| ||||||||||||||||||    
T  28930126 ttgggaagaccaagaatgaatattcaagaggcctcagaagactttacagttggaggaattttgttcccaagttccaagacaa 28930045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 284 - 363
Target Start/End: Complemental strand, 9962182 - 9962102
Alignment:
Q  284 tatttatttaattgctttattaactatttaattg-ttggcgtgttatatttgttagttaattgggttttagagtaattaag 363  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||||||||| || ||||||||| |||||||| |||||||    
T  9962182 tatttatttaattgctttattaattatttaattgtttggcatgttatatttattggttaattggattttagagaaattaag 9962102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 45572641 - 45572727
Alignment:
Q  32 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 119  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45572641 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45572727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 45576308 - 45576394
Alignment:
Q  32 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 119  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45576308 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45576394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 45579975 - 45580061
Alignment:
Q  32 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 119  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45579975 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45580061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 45583642 - 45583728
Alignment:
Q  32 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 119  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45583642 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45583728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 45587309 - 45587395
Alignment:
Q  32 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 119  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45587309 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45587395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 45590976 - 45591062
Alignment:
Q  32 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 119  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45590976 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45591062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 45594643 - 45594729
Alignment:
Q  32 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 119  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45594643 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45594729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 45598310 - 45598396
Alignment:
Q  32 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 119  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45598310 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45598396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 45601977 - 45602063
Alignment:
Q  32 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 119  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45601977 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45602063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 45605644 - 45605730
Alignment:
Q  32 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 119  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45605644 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45605730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 45609311 - 45609397
Alignment:
Q  32 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 119  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45609311 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45609397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 45612978 - 45613064
Alignment:
Q  32 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 119  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45612978 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45613064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 45616645 - 45616731
Alignment:
Q  32 gcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaa 119  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  45616645 gcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaa-aaggcgaagaaa 45616731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 36191325 - 36191428
Alignment:
Q  16 aatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaa 115  Q
    ||||||||||||| |||| ||| |||||||||||| ||||| |||| || |  |||||||||||| || |||||| ||| ||||||||||| ||||| ||    
T  36191325 aatgaagattcaataggcttcataagactttacaaggggaggaattatgttttcaagttccaagataacttacattgaagcaaacacctaaaaaggcaaa 36191424  T
Q  116 gaaa 119  Q
    ||||    
T  36191425 gaaa 36191428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 21905578 - 21905531
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 49  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  21905578 ttgggaagacaaagaatgaagattcaagaggcctcaggagactttaca 21905531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22378072 - 22378147
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 76  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||  || || ||||||| | |||||||||    
T  22378072 cttgggaagacaaagaatgaagattcaagaggcctcaggagaccttacataggaaggaattttgtttccaagttcc 22378147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 25883584 - 25883702
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  |||||||| ||||||| || ||| |||||||||| ||  ||||| |||| || |||||||||||||||||  |||||| |||  ||||    
T  25883584 cttgggaagatgaagaatgacgattcaaaagacctaaaaagactttgcagagggaggaattatgttcccaagttccaagacatcttacattgaagtaaac 25883683  T
Q  101 acctaacaaggcgaagaaa 119  Q
    |||| | | ||||||||||    
T  25883684 acctcaaagggcgaagaaa 25883702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 29834708 - 29834638
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 83  Q
    |||||||||||||||| ||||||||||||||| |||||  |||| ||||||| |||||| |||||| ||||    
T  29834708 aagaatgaagattcaacaggcctcaaaagactctacaaatggaggaattttgttcccaaattccaacacaa 29834638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 24346309 - 24346390
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    |||| |||||||||||||||||| ||| ||||||||| ||||| ||||||  ||||||||| |  |||||||| ||||||||    
T  24346309 cttgagaagacaaagaatgaagactcatgaggcctcagaagacattacaaatggagaaattatattcccaagtcccaagaca 24346390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 28766716 - 28766635
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 83  Q
    |||||||||  || ||||||||||||||| | |||| |||||||||||| |||||||||| || ||||||  ||||||||||    
T  28766716 ttgggaagatgaacaatgaagattcaagatgtctcagaagactttacaatgggagaaattatgttcccaatatccaagacaa 28766635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34580017 - 34580086
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctccca 70  Q
    ||||||||||  |||||||||||||||||| || ||| ||||||||||||||||| ||| |||| |||||    
T  34580017 cttgggaagattaagaatgaagattcaagatgcatcataagactttacaacgggaaaaaatttggtccca 34580086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34585766 - 34585835
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctccca 70  Q
    ||||||||||  |||||||||||||||||| || ||| ||||||||||||||||| ||| |||| |||||    
T  34585766 cttgggaagattaagaatgaagattcaagatgcatcataagactttacaacgggaaaaaatttggtccca 34585835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 22627228 - 22627120
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    |||||||||||||||| |||||||| ||||  ||| |  ||||| ||||||  ||||||||||||||| |  ||||||||||  ||||||||||  ||||    
T  22627228 aagaatgaagattcaataggcctcataagatgttagagagggaggaatttttttcccaagttccaagatatcttacatagaagaaaacacctaaagaggc 22627129  T
Q  113 gaagaaaca 121  Q
     ||||||||    
T  22627128 aaagaaaca 22627120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 32086866 - 32086794
Alignment:
Q  16 aatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttac 88  Q
    |||||||||||||||||| | |  ||||||||||| ||||| |||| || ||||||||||||||||| |||||    
T  32086866 aatgaagattcaagaggctttaggagactttacaaagggaggaattatgttcccaagttccaagacattttac 32086794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 18120801 - 18120863
Alignment:
Q  11 caaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagt 73  Q
    ||||||||||||||||||||||||||| |||||||   || ||||| ||||||| ||||||||    
T  18120801 caaagaatgaagattcaagaggcctcagaagacttacaaatgggaggaattttgttcccaagt 18120863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 27907767 - 27907829
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttg 64  Q
    |||||||||| ||| |||||||||||||||||||||  ||||||||||  ||||| |||||||    
T  27907767 ttgggaagaccaaggatgaagattcaagaggcctcaggagactttacatagggaggaattttg 27907829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 29144486 - 29144441
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagacttta 47  Q
    |||||||||||||||||||||||||||||||| |||  ||||||||    
T  29144486 ttgggaagacaaagaatgaagattcaagaggcatcaggagacttta 29144441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 18758153 - 18758105
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 50  Q
    |||||||||  |||||||||||||||||||||||||  |||||||||||    
T  18758153 ttgggaagaacaagaatgaagattcaagaggcctcaggagactttacaa 18758105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 32438928 - 32439004
Alignment:
Q  6 gaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    |||||| | |||||||||||||||||||||||||| || |||||| ||||| |||| || || ||||| | ||||||    
T  32438928 gaagaccatgaatgaagattcaagaggcctcaaaaaacattacaaagggaggaattctgttcacaagtcctaagaca 32439004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 29850873 - 29850795
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaag 79  Q
    ||||||||||   |||||||| |||||| |||| |   |||||||||||| ||||| ||||||| ||||||||||||||    
T  29850873 cttgggaagatgtagaatgaaaattcaaaaggcatgtgaagactttacaaagggaggaattttgttcccaagttccaag 29850795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 17674235 - 17674306
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagtt 74  Q
    ||||||| || |||||||||| |||||||||||| |  ||||||||||  ||||| ||||||| |||||||||    
T  17674235 ttgggaataccaagaatgaaggttcaagaggcct-atgagactttacatagggaggaattttgttcccaagtt 17674306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 20175654 - 20175618
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttaca 49  Q
    |||||||| |||||||||||||||| |||||||||||    
T  20175654 aagaatgatgattcaagaggcctcataagactttaca 20175618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 25537400 - 25537368
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactt 45  Q
    |||||| ||||||||||||||||||||||||||    
T  25537400 aagaataaagattcaagaggcctcaaaagactt 25537368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 9e-31; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 26315075 - 26314955
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  ||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| |||||||||| || ||||||||||| || ||    
T  26315075 cttgggaagatgaagaatgaagattcaagaggcctcataagactttacaaagggagaaattttgttcctaagttccaaggcattttacatagaagcagac 26314976  T
Q  101 acctaacaaggcgaagaaaca 121  Q
    |||||| ||  ||||||||||    
T  26314975 acctaaaaaaacgaagaaaca 26314955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 24261910 - 24261791
Alignment:
Q  17 atgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaag 116  Q
    ||||||||||||||||||||| |||||||||||| |||||  ||| |  ||||||||| ||||| || |||||||||| ||||||||||| |||||||||    
T  24261910 atgaagattcaagaggcctcataagactttacaaagggaggtattctaatcccaagtttcaagaaaacttacatagaagcaaacacctaaaaaggcgaag 24261811  T
Q  117 aaacagacatttcggcaccc 136  Q
    |||||  |||||| ||||||    
T  24261810 aaacaagcatttcagcaccc 24261791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 24188740 - 24188615
Alignment:
Q  3 tgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacac 102  Q
    ||||||||  ||||||||||||||||||||| ||| ||||| |||||   ||||||||| || |||||||||| || |||  ||||||| || |||||||    
T  24188740 tgggaagatgaagaatgaagattcaagaggcttcagaagacgttacatatggagaaattatgttcccaagttcgaacacatcttacatataagcaaacac 24188641  T
Q  103 ctaacaaggcgaagaaacagacattt 128  Q
    |||| |||||||||||||| ||||||    
T  24188640 ctaaaaaggcgaagaaacatacattt 24188615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 26122250 - 26122142
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    ||||||||||||||||||||  ||| |||||||||  | || || |||| || ||||||||||||||| || |||||||||| ||||||||||| |||||    
T  26122250 aagaatgaagattcaagaggtgtcagaagactttatgaaggaaggaattatgttcccaagttccaagaaaaattacatagaaacaaacacctaaaaaggc 26122151  T
Q  113 gaagaaaca 121  Q
    |||||||||    
T  26122150 gaagaaaca 26122142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 24162266 - 24162374
Alignment:
Q  13 aagaatgaagattcaaga-ggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaagg 111  Q
    |||||||||||||||||| ||||||| || |||||| || ||||| ||||| | |||||||||||||||||| |||||||| | ||||||||||| ||||    
T  24162266 aagaatgaagattcaagaaggcctcagaaaactttaaaa-gggaggaatttcgttcccaagttccaagacaacttacataggagcaaacacctaaaaagg 24162364  T
Q  112 cgaagaaaca 121  Q
     |||||||||    
T  24162365 tgaagaaaca 24162374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 17469816 - 17469918
Alignment:
Q  16 aatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaa 115  Q
    |||||||||||||||||||||| |||||||||||| ||||| |||| || ||||||| |||||||||  || || | || ||||||||||| ||||||||    
T  17469816 aatgaagattcaagaggcctcataagactttacaaagggaggaattatgttcccaag-tccaagacatcttgcagaaaaacaaacacctaaaaaggcgaa 17469914  T
Q  116 gaaa 119  Q
    ||||    
T  17469915 gaaa 17469918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 24265534 - 24265603
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    ||||||||||| |||| |||||||| |||||||||||| ||||| ||||||| || ||||||||||||||    
T  24265534 aagaatgaagaatcaaaaggcctcagaagactttacaaagggaggaattttgttcacaagttccaagaca 24265603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 24342165 - 24342234
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    ||||||||||| |||| |||||||| |||||||||||| ||||| ||||||| || ||||||||||||||    
T  24342165 aagaatgaagaatcaaaaggcctcagaagactttacaaagggaggaattttgttcacaagttccaagaca 24342234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 18227465 - 18227385
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    |||||||||  ||||||||||||||||||| ||||| ||| | |||||  |||||||||| || |||||||||||||||||    
T  18227465 ttgggaagattaagaatgaagattcaagagacctcataaggcattacagagggagaaattatgttcccaagttccaagaca 18227385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18939374 - 18939294
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagac 81  Q
    ||||| |||||||||| |||| |||||||||||| || |||||||||||| |||| |||||||  ||||||||| ||||||    
T  18939374 cttggaaagacaaagattgaatattcaagaggccccagaagactttacaaagggacaaattttattcccaagtttcaagac 18939294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 24658547 - 24658591
Alignment:
Q  5 ggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 49  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  24658547 ggaagacaaagaatgaagattcaagaggcctcaagagactttaca 24658591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 23266667 - 23266560
Alignment:
Q  14 agaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcg 113  Q
    ||||||||||||||||| |||| | ||||| |||||| ||||  |||| || |||||||||||||||||  ||| |||||| |||||||| || |||  |    
T  23266667 agaatgaagattcaagatgccttagaagaccttacaaggggaagaattatgttcccaagttccaagacatcttatatagaaacaaacacccaaaaagatg 23266568  T
Q  114 aagaaaca 121  Q
    ||||||||    
T  23266567 aagaaaca 23266560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 23338793 - 23338731
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttg 64  Q
    |||||||||| ||||||||||||||||||| |||||  ||||||||||| ||||| |||||||    
T  23338793 ttgggaagaccaagaatgaagattcaagagtcctcaggagactttacaatgggaggaattttg 23338731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 28254741 - 28254628
Alignment:
Q  15 gaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcga 114  Q
    |||||||||||||| |||||||| ||||| ||||||  |||| |||| || ||  |||||||||||||  |||||| ||| |||||||| || |||  ||    
T  28254741 gaatgaagattcaaaaggcctcataagacattacaaatggaggaattatgttcagaagttccaagacatcttacatggaagcaaacaccaaaaaagatga 28254642  T
Q  115 agaaacagacattt 128  Q
    ||||||| ||||||    
T  28254641 agaaacaaacattt 28254628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 19761823 - 19761943
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  ||||| ||| ||||||||||||||| ||||| |||||  ||||| |||| || ||||||||||||| |||   ||| ||||| |||||    
T  19761823 cttgggaagatgaagaaagaatattcaagaggcctcagaagacgttacagagggaggaattatgttcccaagttccaaaacatcatacttagaagcaaac 19761922  T
Q  101 acctaacaaggcgaagaaaca 121  Q
    ||| || ||||| || |||||    
T  19761923 acccaaaaaggcaaataaaca 19761943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 23387791 - 23387839
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 50  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  23387791 ttgggaagacaaagagtgaagattcaagaggcctcaatagacttaacaa 23387839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 24849782 - 24849850
Alignment:
Q  52 gggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaac 120  Q
    ||||| |||| || ||||||||| |||||||  |||||||||| ||||||||||| |||||||||||||    
T  24849782 gggaggaattatgttcccaagtttcaagacatcttacatagaagcaaacacctaaaaaggcgaagaaac 24849850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 135
Target Start/End: Complemental strand, 26253313 - 26253190
Alignment:
Q  12 aaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaagg 111  Q
    |||||||||||||||||||| ||||| ||||  |||||  ||||| |||  || |||||||||  ||||||  ||| || |||  |||||||||| |||     
T  26253313 aaagaatgaagattcaagagccctcagaagatattacagagggaggaatgatgttcccaagttataagacatcttatatggaagtaaacacctaaaaaga 26253214  T
Q  112 cgaagaaacagacatttcggcacc 135  Q
    |||||||||| ||||||| |||||    
T  26253213 cgaagaaacatacatttcagcacc 26253190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 18832076 - 18831974
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||| |||| |||||||||||||||||||| ||||| ||||   ||||| |||| || |  ||||||||||||||  |||||| |||  ||||    
T  18832076 cttgggaagacgaagattgaagattcaagaggcctcagaagacgttacggagggaggaattatgttatcaagttccaagacatcttacattgaagaaaac 18831977  T
Q  101 acc 103  Q
    |||    
T  18831976 acc 18831974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 20860189 - 20860147
Alignment:
Q  5 ggaagacaaagaatgaagattcaagaggcctcaaaagacttta 47  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  20860189 ggaagacaaagaatgaagattcaagaggcctcaggagacttta 20860147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 25572705 - 25572798
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaa 94  Q
    ||||||||||  ||||| |||||||||||||| |||  ||||| |||||| ||||| |||| || ||||||||  ||||||| ||||| |||||    
T  25572705 cttgggaagatgaagaaggaagattcaagaggtctcggaagacattacaaagggaggaattatgttcccaagtctcaagacactttacgtagaa 25572798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 25920674 - 25920617
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctccca 70  Q
    ||||||||||||||||||| ||||| |||||||||||  |||||||||| || |||||    
T  25920674 aagaatgaagattcaagagacctcataagactttacagagggagaaattatgttccca 25920617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 19052951 - 19052919
Alignment:
Q  5 ggaagacaaagaatgaagattcaagaggcctca 37  Q
    |||||||||||||||||||||||||||||||||    
T  19052951 ggaagacaaagaatgaagattcaagaggcctca 19052919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 20532752 - 20532800
Alignment:
Q  25 tcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagt 73  Q
    ||||||||||||| ||||| |||||| ||||||||||||| ||||||||    
T  20532752 tcaagaggcctcacaagacattacaaagggagaaattttgttcccaagt 20532800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 355
Target Start/End: Complemental strand, 18767942 - 18767859
Alignment:
Q  274 tttaggattatatttatttaattg-ctttattaactatttaattg-ttggcgtgttatatttgttagttaattgggttttagag 355  Q
    ||||||||| ||||||||||||||  |||||||| |||||||||| |||| |||| ||||||||| |||| |||  ||||||||    
T  18767942 tttaggattttatttatttaattgtttttattaattatttaattgtttggtgtgtaatatttgttggttatttgaattttagag 18767859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 28666344 - 28666297
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 49  Q
    |||||||||||||||||||| ||||||||||||||   ||||||||||    
T  28666344 ttgggaagacaaagaatgaacattcaagaggcctcgggagactttaca 28666297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 29987808 - 29987734
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 76  Q
    |||||||||| || |||||||||||||||| |||||  ||||||||||  ||||| |||| || ||| |||||||    
T  29987808 ttgggaagaccaaaaatgaagattcaagagacctcatgagactttacagtgggaggaattatgttcctaagttcc 29987734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 24320768 - 24320801
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcct 35  Q
    |||||||||| |||||||||||||||||||||||    
T  24320768 ttgggaagaccaagaatgaagattcaagaggcct 24320801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 23032530 - 23032482
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 50  Q
    |||||||||||| ||||||||||||||||| ||||  ||||| ||||||    
T  23032530 ttgggaagacaacgaatgaagattcaagagacctctgaagacattacaa 23032482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 22470648 - 22470766
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  |||||||||||||||| |||||||| ||||||| |||| ||||| ||||||| |||||||||| ||||||  ||||| |||| |||||    
T  22470648 cttgggaagatgaagaatgaagattcaataggcctcagaagacttcacaaagggaggaattttgttcccaagttcgaagacatcttacaaagaagcaaac 22470747  T
Q  101 acctaacaaggcgaagaaa 119  Q
    |||||| ||||||||||||    
T  22470748 acctaaaaaggcgaagaaa 22470766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 22246851 - 22246750
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  ||||||||||||| ||||| ||||||||||||||||||  |||| |||| ||||||||| ||||||||||  |||||||||| |||||    
T  22246851 cttgggaagatgaagaatgaagatttaagagacctcaaaagactttacaaaaggaggaattctgctcccaaattccaagacatcttacatagaagcaaac 22246752  T
Q  101 ac 102  Q
    ||    
T  22246751 ac 22246750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 8448651 - 8448520
Alignment:
Q  5 ggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacct 104  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||  | || |||| |  ||||||||||||||||||  |||  | || |||||||||    
T  8448651 ggaagacaaataatgaagatttaagaggcctcaaaagactttacaaacgaaggaattcttttcccaagttccaagacaacatacgcaaaagcaaacacct 8448552  T
Q  105 aacaaggcgaagaaacagacatttcggcaccc 136  Q
    || ||||| ||||||||  |||||| ||||||    
T  8448551 aaaaaggcaaagaaacaagcatttcagcaccc 8448520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 18735525 - 18735631
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    ||||||||||||||||||| ||||| |||||||||||  ||||| |||| || |||||||||||||||||  |||||| ||| |||||  ||||  ||||    
T  18735525 aagaatgaagattcaagagccctcagaagactttacagagggaggaattctgttcccaagttccaagacatcttacattgaagcaaaccactaaacaggc 18735624  T
Q  113 gaagaaa 119  Q
    |||||||    
T  18735625 gaagaaa 18735631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 20891898 - 20891967
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    ||||||||||||||||||||||||| |||||||||||  || |||||||||| ||||||||| |||||||    
T  20891898 aagaatgaagattcaagaggcctcagaagactttacagaggaagaaattttgttcccaagtttcaagaca 20891967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 3114953 - 3115041
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacat 90  Q
    |||||||||||||||   |||||||||||||||||| ||||| |||||  ||||| |||| || ||||||||||||||||| |||||||    
T  3114953 ttgggaagacaaagatataagattcaagaggcctcagaagacgttacagagggaggaattatgttcccaagttccaagacattttacat 3115041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 820100 - 820190
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacc 103  Q
    |||||| |||||||||||||||||||||||| |||||  ||||| ||||||| ||| |||||||| ||||  ||||| |||| ||||||||    
T  820100 aagaattaagattcaagaggcctcaaaagacgttacagagggaggaattttgttccaaagttccatgacatcttacagagaagcaaacacc 820190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 13906826 - 13906900
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttc 75  Q
    |||||||||| |||||||| ||||||||||||||||| |||||||||| | ||||| |||| || ||||||||||    
T  13906826 cttgggaagataaagaatggagattcaagaggcctcataagactttactaagggaggaattatgttcccaagttc 13906900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 20886711 - 20886605
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    |||||||||||| |||||||||||| ||||| |||||| ||||  ||||||  |||||||||||||||||  ||| || ||| ||||||||||| ||| |    
T  20886711 aagaatgaagatccaagaggcctcataagacattacaaagggattaattttattcccaagttccaagacatcttatatggaagcaaacacctaaaaagac 20886612  T
Q  113 gaagaaa 119  Q
     ||||||    
T  20886611 aaagaaa 20886605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 23054821 - 23054921
Alignment:
Q  3 tgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacac 102  Q
    ||||||||  ||||||||||||||||||||||||||||||  |||||| ||||| |||| || ||| |||| ||||||||  ||| || ||| |||||||    
T  23054821 tgggaagatcaagaatgaagattcaagaggcctcaaaagaaattacaaagggaggaattatgttcctaagtcccaagacatcttatatggaagcaaacac 23054920  T
Q  103 c 103  Q
    |    
T  23054921 c 23054921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 34276685 - 34276765
Alignment:
Q  3 tgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 83  Q
    ||||||||| ||||||||||| |||||||||||||  ||||||||||  ||||| |||| || ||||||||||| ||||||    
T  34276685 tgggaagaccaagaatgaagagtcaagaggcctcaggagactttacagtgggaggaattctgttcccaagttccgagacaa 34276765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 5509923 - 5509844
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaaga 80  Q
    |||||||||||||||| ||| |||||||||||||||| ||||| |||||  ||||| ||||||| || |||||| |||||    
T  5509923 cttgggaagacaaagattgacgattcaagaggcctcataagacgttacagagggaggaattttgttctcaagtttcaaga 5509844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 19388093 - 19388196
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  |||||||||| ||||| |||||||| |||||||||||   ||||||||| || ||||| |||||||||||  | |||| ||| |||||    
T  19388093 cttgggaagattaagaatgaagcttcaataggcctcagaagactttacagaaggagaaattatgttcccatgttccaagacatctaacattgaagcaaac 19388192  T
Q  101 acct 104  Q
    ||||    
T  19388193 acct 19388196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 3429478 - 3429536
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaa 71  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||| ||| ||||||    
T  3429478 aagaatgaagattcaagagacctcaaaagactttacaaagggaggaatgttgttcccaa 3429536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 28326376 - 28326494
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  ||||||||| |||||||| |||||| ||| |||||||  | ||| ||||||  |||||||||||||||||  ||| || ||| |||||    
T  28326376 cttgggaagatgaagaatgaatattcaagatgcctcataaggctttacagagagaggaattttattcccaagttccaagacatcttatatggaagcaaac 28326475  T
Q  101 acctaacaaggcgaagaaa 119  Q
    ||| || ||| ||||||||    
T  28326476 acccaaaaagacgaagaaa 28326494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 17134944 - 17134818
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 101  Q
    |||||||||  ||||||||||||||||||||||||| ||||||||| |   |||| |||| || ||||||| |||||||||  |||||| |||  |||||    
T  17134944 ttgggaagatgaagaatgaagattcaagaggcctcataagactttagagatggaggaattctgttcccaag-tccaagacatcttacattgaagaaaaca 17134846  T
Q  102 cctaacaaggcgaagaaacagacatttc 129  Q
    | |||  ||| |||||||| | ||||||    
T  17134845 cttaaacaggggaagaaacgggcatttc 17134818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 31284551 - 31284621
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 83  Q
    ||||||||||||||||||||  ||||||||||||| |  |||||||||| || ||||| || |||||||||    
T  31284551 aagaatgaagattcaagaggtttcaaaagactttaaagagggagaaattatgttcccaggtcccaagacaa 31284621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 16242436 - 16242505
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaa 71  Q
    |||||||||| |||||| ||||||||||||||||||  ||||||||||  ||||| |||| || ||||||    
T  16242436 ttgggaagaccaagaattaagattcaagaggcctcatgagactttacagtgggaggaattctgttcccaa 16242505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 18466941 - 18467042
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 101  Q
    |||||||||| | |||  ||||||||||||| |||| ||||||||| || ||||| ||||||| |||||||| |||| |||  ||| || ||| ||||||    
T  18466941 ttgggaagactatgaacaaagattcaagaggactcagaagactttaaaaagggagtaattttgttcccaagtaccaaaacatcttatatggaagcaaaca 18467040  T
Q  102 cc 103  Q
    ||    
T  18467041 cc 18467042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 11636229 - 11636265
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttaca 49  Q
    ||||||||||||||||||||||||| |||||||||||    
T  11636229 aagaatgaagattcaagaggcctcagaagactttaca 11636265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 18747673 - 18747602
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagtt 74  Q
    ||||||||| ||| ||||||||||||||||||||||  ||||||||||  ||||| |||| || |||||||||    
T  18747673 ttgggaagataaa-aatgaagattcaagaggcctcatgagactttacatggggaggaattctgttcccaagtt 18747602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 19912427 - 19912355
Alignment:
Q  6 gaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaa 78  Q
    |||||| ||||| ||||||||||||||||||  |||||||||||  ||||  ||||||| |||||| ||||||    
T  19912427 gaagaccaagaacgaagattcaagaggcctctgaagactttacatagggaagaattttgttcccaaattccaa 19912355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 23637465 - 23637386
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    |||||||||  ||||||||||||||||| ||||||| ||||| ||| || ||||||||||||| ||||  || ||||||||    
T  23637465 ttgggaagatcaagaatgaagattcaagtggcctcataagacattagaa-gggagaaattttgttcccgggtcccaagaca 23637386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 18457362 - 18457397
Alignment:
Q  10 acaaagaatgaagattcaagaggcctcaaaagactt 45  Q
    |||||||||||||||||||||||| |||||||||||    
T  18457362 acaaagaatgaagattcaagaggcatcaaaagactt 18457397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 27853169 - 27853276
Alignment:
Q  12 aaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaagg 111  Q
    |||||||||||||||||||||||||| || || |||||  || || || | || || ||||||||||||||  ||| || ||| |||||||| || |||     
T  27853169 aaagaatgaagattcaagaggcctcagaatacgttacagaggtaggaaatatgttctcaagttccaagacatcttatatggaagcaaacacccaaaaaga 27853268  T
Q  112 cgaagaaa 119  Q
    ||||||||    
T  27853269 cgaagaaa 27853276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 2166280 - 2166354
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 76  Q
    ||||||||||  ||| ||||||||||||||||||||  || ||||||| ||| || |||| || |||||||||||    
T  2166280 ttgggaagaccgagagtgaagattcaagaggcctcatgagcctttacagcggaaggaattctgttcccaagttcc 2166354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 6075825 - 6075789
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctca 37  Q
    ||||||||||  |||||||||||||||||||||||||    
T  6075825 cttgggaagatgaagaatgaagattcaagaggcctca 6075789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 20431306 - 20431238
Alignment:
Q  19 gaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaattta 87  Q
    ||||||||||||||| |||  ||||||||||  ||||| |||| || ||||||||||| || |||||||    
T  20431306 gaagattcaagaggcgtcatgagactttacagtgggaggaattatgttcccaagttccgagtcaattta 20431238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 5e-26; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 9849950 - 9850070
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctccc-aagttccaagacaatttacatagaatcaaa 99  Q
    |||||||||| |||||||||| |||||||||| |||| |||||||||||| ||||| |||| || |||| |||||||||||||| |||||||||| ||||    
T  9849950 cttgggaagataaagaatgaaaattcaagaggtctcagaagactttacaaagggaggaattctgttcccaaagttccaagacaacttacatagaaacaaa 9850049  T
Q  100 cacctaacaaggcgaagaaac 120  Q
    ||||||| ||| | |||||||    
T  9850050 cacctaaaaagacaaagaaac 9850070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 25024957 - 25024843
Alignment:
Q  4 gggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacc 103  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| ||||  || | || ||| |||||||||||||| ||| |||||| ||||||||    
T  25024957 gggaagatgaagaatgaagattcaagaggcctcaaaagactttacaaagggaagaaatatgttccgaagttccaagacaacttatatagaagcaaacacc 25024858  T
Q  104 taacaaggcgaagaaa 119  Q
    ||| ||| ||||||||    
T  25024857 taa-aagacgaagaaa 25024843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 17277695 - 17277619
Alignment:
Q  6 gaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||| ||||| ||||||| |||||||||||||||||    
T  17277695 gaagataaagaatgaagactcaagaggcctcataagactttacaaagggaggaattttgttcccaagttccaagaca 17277619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 16669964 - 16670083
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  |||||| ||||||||| |||||||| ||||| |||||| ||||| ||||||| |||||||||||| ||||  |||||||||| |||||    
T  16669964 cttgggaagatgaagaattaagattcaaaaggcctcagaagacgttacaaagggaggaattttgttcccaagttccatgacatcttacatagaagcaaac 16670063  T
Q  101 acctaacaaggcgaagaaac 120  Q
    |||  | || ||||||||||    
T  16670064 acccgaaaaagcgaagaaac 16670083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 26114456 - 26114559
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    ||||||||||||||||||||||||||||||||||||||  |||  ||||||| |||||||||||||||||  ||||| | || ||||||| ||| | |||    
T  26114456 aagaatgaagattcaagaggcctcaaaagactttacaaatggatgaattttgttcccaagttccaagacatattacacaaaaacaaacacttaaaacggc 26114555  T
Q  113 gaag 116  Q
    ||||    
T  26114556 gaag 26114559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 23083555 - 23083434
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  ||||||||||||||||||||||||  ||||| |||||  ||| ||||||||| | |||||||||||||||  ||||||| || |||||    
T  23083555 cttgggaagatgaagaatgaagattcaagaggcctcggaagacgttacagagggtgaaattttgtttccaagttccaagacatcttacataaaaacaaac 23083456  T
Q  101 acctaacaaggcgaagaaacag 122  Q
    | | || ||||| |||||||||    
T  23083455 atccaaaaaggcaaagaaacag 23083434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 22350481 - 22350563
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 83  Q
    ||||||||||| |||||||||  |||||||||||||| || ||||||||| ||||| || |||| ||||||||||||||||||    
T  22350481 cttgggaagacgaagaatgaacgttcaagaggcctcataatactttacaaagggaggaactttgttcccaagttccaagacaa 22350563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 8968316 - 8968390
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 76  Q
    |||||||||| ||||||||||||||||||| ||||| |||||||||||  ||||| |||| || |||||||||||    
T  8968316 ttgggaagaccaagaatgaagattcaagagacctcagaagactttacagtgggaggaattatgttcccaagttcc 8968390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 10236443 - 10236325
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  || ||||||||||||||| |||||| ||| |||||||| || || ||||||| || ||||||||||||||  |||||| |||  ||||    
T  10236443 cttgggaagatgaataatgaagattcaagatgcctcagaagtctttacaaaggaaggaattttgttctcaagttccaagacatcttacattgaagaaaac 10236344  T
Q  101 acctaacaaggcgaagaaa 119  Q
    |||| | ||||| ||||||    
T  10236343 acctcaaaaggcaaagaaa 10236325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 16928776 - 16928702
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 76  Q
    |||| ||||| ||||||||||||||||||||||||| |||||||||||| || || | || ||||||||||||||    
T  16928776 ttggcaagaccaagaatgaagattcaagaggcctcagaagactttacaatggcaggagttatgctcccaagttcc 16928702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 15047626 - 15047525
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 101  Q
    |||||||||  |||||||||||||||||||||||| ||||||||||| | ||||||| ||  | |||||||| ||||||||  ||| || ||| ||||||    
T  15047626 ttgggaagatcaagaatgaagattcaagaggcctcgaaagactttaccaagggagaagttacgttcccaagtcccaagacatcttatatggaagcaaaca 15047527  T
Q  102 cc 103  Q
    ||    
T  15047526 cc 15047525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 15106798 - 15106899
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 101  Q
    |||||||||  |||||||||||||||||||||||| ||||||||||| | ||||||| ||  | |||||||| ||||||||  ||| || ||| ||||||    
T  15106798 ttgggaagatcaagaatgaagattcaagaggcctcgaaagactttaccaagggagaagttacgttcccaagtcccaagacatcttatatggaagcaaaca 15106897  T
Q  102 cc 103  Q
    ||    
T  15106898 cc 15106899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 5691609 - 5691506
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  |||||||||||||  | ||||||||||||||||||||  ||| ||||||||| ||| ||||||||| |||  |||||| |||  ||||    
T  5691609 cttgggaagatgaagaatgaagatttgataggcctcaaaagactttacagagggggaaattttgttccaaagttccaatacatcttacattgaagaaaac 5691510  T
Q  101 acct 104  Q
    ||||    
T  5691509 acct 5691506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 22345915 - 22345852
Alignment:
Q  17 atgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaaga 80  Q
    ||||||||||||||||||||| ||||| |||||| ||||| ||||||| ||||| |||||||||    
T  22345915 atgaagattcaagaggcctcataagacattacaaagggaggaattttgttcccatgttccaaga 22345852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 274 - 363
Target Start/End: Original strand, 15849073 - 15849163
Alignment:
Q  274 tttaggattatatttatttaattgctttattaactatttaattgtt-ggcgtgttatatttgttagttaattgggttttagagtaattaag 363  Q
    ||||||||| |||||||||||||| |||||  | |||||| ||||| || |||||||||||||| ||||||||| | |||||| |||||||    
T  15849073 tttaggattttatttatttaattggtttatgtattatttatttgtttggtgtgttatatttgttggttaattggatgttagagaaattaag 15849163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 19094088 - 19094019
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    ||||||||||||||||||||||||| |||||||||||  ||||| ||||||  |  ||||||||||||||    
T  19094088 aagaatgaagattcaagaggcctcataagactttacagagggaggaattttattaacaagttccaagaca 19094019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 19883722 - 19883802
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    |||||||||  ||||||||| |||||| |||||| | |||||||||||  ||||||||||||| ||||| || ||||||||    
T  19883722 ttgggaagatcaagaatgaaaattcaacaggccttagaagactttacagagggagaaattttgttcccaggtcccaagaca 19883802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 11252372 - 11252419
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 49  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||||    
T  11252372 ttgggaagacaaagaatgaatatacaagaggcctcaagagactttaca 11252419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 22527788 - 22527733
Alignment:
Q  12 aaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctc 67  Q
    ||||||||||||||||||||||||||||| || |||||| ||||  ||||||||||    
T  22527788 aaagaatgaagattcaagaggcctcaaaatacgttacaaagggaagaattttgctc 22527733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 11782318 - 11782258
Alignment:
Q  16 aatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 76  Q
    ||||||||||||||||||||||  |||||||||| | |||| |||| || |||||||||||    
T  11782318 aatgaagattcaagaggcctcaggagactttacagctggaggaattatgttcccaagttcc 11782258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19927068 - 19927128
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaatt 61  Q
    ||||||||||  ||||||||||||| ||||||||||| |||| ||||||| ||||| ||||    
T  19927068 cttgggaagatgaagaatgaagatttaagaggcctcagaagattttacaaagggaggaatt 19927128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 9263562 - 9263621
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaatt 61  Q
    |||||||||  ||||||||||||||||||| | ||| |||||||||||  ||||||||||    
T  9263562 ttgggaagatcaagaatgaagattcaagagtcatcataagactttacagagggagaaatt 9263621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 15166320 - 15166273
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 49  Q
    |||||||||| |||||||||||||||| ||||| ||| ||||||||||    
T  15166320 ttgggaagaccaagaatgaagattcaaaaggccccaatagactttaca 15166273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 17711155 - 17711084
Alignment:
Q  5 ggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 76  Q
    ||||||| |||||||||||||||||||||| ||  |||| |||||  ||||| |||| || |||||||||||    
T  17711155 ggaagaccaagaatgaagattcaagaggccccatgagacattacatagggaggaattatgttcccaagttcc 17711084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 18447683 - 18447802
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 101  Q
    |||||||||  ||||| ||||||||||||||||| | || || |||||  |||||||||| || ||| | || ||||||||  ||| || ||| | ||||    
T  18447683 ttgggaagatcaagaaggaagattcaagaggccttagaaaacattacagagggagaaattatgttcctaggtcccaagacatcttatatggaagctaaca 18447782  T
Q  102 cctaacaaggcgaagaaaca 121  Q
    || |||||| ||||||||||    
T  18447783 cccaacaagacgaagaaaca 18447802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 19547308 - 19547375
Alignment:
Q  15 gaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    ||||||||||||||||||| ||  ||||| |||||| |||||||||| || || |||||| |||||||    
T  19547308 gaatgaagattcaagaggcgtcggaagacattacaaagggagaaattatgttctcaagtttcaagaca 19547375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 12836304 - 12836370
Alignment:
Q  55 agaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaaca 121  Q
    |||||||||| ||||||||||| |||||  ||| |||||| |||||||| || ||| ||||||||||    
T  12836304 agaaattttgttcccaagttcctagacatcttatatagaagcaaacacccaaaaagacgaagaaaca 12836370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37741452 - 37741385
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaac-gggagaaattttgctccc 69  Q
    ||||||||||||| ||||||||||||||||||||| | ||||| ||||||| ||||| ||||||| ||||    
T  37741452 cttgggaagacaa-gaatgaagattcaagaggccttagaagac-ttacaacagggaggaattttgttccc 37741385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 10108100 - 10108020
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    |||||||||| | ||||||| || |||||||||||| || || |||||| ||||| |||| |  |||||||| ||||||||    
T  10108100 ttgggaagaccatgaatgaatatgcaagaggcctcagaaaacattacaaagggaggaattattttcccaagtcccaagaca 10108020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 16714501 - 16714457
Alignment:
Q  6 gaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 50  Q
    |||||||| ||||||||||||||||||||||  ||||| ||||||    
T  16714501 gaagacaatgaatgaagattcaagaggcctctgaagacattacaa 16714457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 22217250 - 22217318
Alignment:
Q  15 gaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 83  Q
    |||||||||||||| |||||||  ||||| |||||| || || ||||||  |||||||| |||||||||    
T  22217250 gaatgaagattcaataggcctcgtaagacattacaaaggaaggaatttttttcccaagtcccaagacaa 22217318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25096153 - 25096118
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctca 37  Q
    ||||||||||||| |||||||||||||||||||||||    
T  25096153 cttgggaagacaa-gaatgaagattcaagaggcctca 25096118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 16114654 - 16114534
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  ||||||||||||||||||||||| | |||||||||||| ||||| | ||||| |||||||||||||||||  |||||| |||  ||||    
T  16114654 cttgggaagatgaagaatgaagattcaagaggccttagaagactttacaaagggagtatttttgttcccaagttccaagacatcttacattgaagtaaac 16114555  T
Q  101 acctaacaaggcgaagaaaca 121  Q
    || ||| |||| |||||||||    
T  16114554 acttaaaaaggtgaagaaaca 16114534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 21848470 - 21848358
Alignment:
Q  17 atgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaag 116  Q
    |||||||||||||| ||||||||||||||||||| ||| | ||||||| |||||||||||||| ||| ||||| | || |||| || | | |||||||||    
T  21848470 atgaagattcaagatgcctcaaaagactttacaaagggtggaattttgttcccaagttccaaggcaacttacacataagcaaatacttgaaaaggcgaag 21848371  T
Q  117 aaacagacatttc 129  Q
    |||||||||||||    
T  21848370 aaacagacatttc 21848358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 9783223 - 9783310
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttac 88  Q
    ||||||||||  || ||||||| |||||||||||||| |||||||||||  ||||| ||||||| ||||||||||||||||| |||||    
T  9783223 cttgggaagatgaaaaatgaaggttcaagaggcctcataagactttacagagggaggaattttgttcccaagttccaagacattttac 9783310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 274 - 351
Target Start/End: Original strand, 10785844 - 10785922
Alignment:
Q  274 tttaggattatatttatttaattgctttattaactatttaattgt-tggcgtgttatatttgttagttaattgggtttt 351  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||||| |||||||    
T  10785844 tttagaattttatttatttaattgctttattaattatttaattgtatggtgtgttatatttgttggttaatggggtttt 10785922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 15571944 - 15572050
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    ||||||||||||||||||||| |||||||| ||||||  ||||| |||| || |||||||||| ||||||  |||||| |||  |||||||| || ||||    
T  15571944 aagaatgaagattcaagaggcatcaaaagagtttacacagggaggaattctgttcccaagttcgaagacatcttacattgaagaaaacacctcaccaggc 15572043  T
Q  113 gaagaaa 119  Q
    |||||||    
T  15572044 gaagaaa 15572050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 20033362 - 20033481
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 101  Q
    |||||||||| | ||||||||||||||||||||||| ||||| || ||| |||||||||| || || ||||| ||||||||  ||| ||  || ||||||    
T  20033362 ttgggaagaccatgaatgaagattcaagaggcctcagaagacatttcaaagggagaaattatgttctcaagtcccaagacatcttatattaaagcaaaca 20033461  T
Q  102 cctaacaaggcgaagaaaca 121  Q
    || || ||| ||||||||||    
T  20033462 cccaaaaagacgaagaaaca 20033481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 12011427 - 12011529
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||||||  || || ||||||| || || || ||||||||| ||| || ||| |||||    
T  12011427 cttgggaagatcaagaatgaagattcaataggcctcaaaagactttacagaggaaggaattttgttctcaggtcccaagacaacttatatggaagcaaac 12011526  T
Q  101 acc 103  Q
    |||    
T  12011527 acc 12011529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 15542556 - 15542630
Alignment:
Q  5 ggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaag 79  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||  ||||| | || || ||||||||||||||    
T  15542556 ggaagaccaagaatgaagattcaagaggcctcaagagactttacatagggaggacttatgttcccaagttccaag 15542630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 24282855 - 24282782
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagtt 74  Q
    ||||||||||  ||||||||| ||||||||||||||| |||||||||||| ||||| |||| || |||||||||    
T  24282855 cttgggaagatgaagaatgaatattcaagaggcctcataagactttacaaagggaggaattatgttcccaagtt 24282782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 13267697 - 13267623
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 76  Q
    |||||||||| |||||| ||||||||||||||||||  ||||||||||  ||||  ||||||| |||||||||||    
T  13267697 ttgggaagaccaagaataaagattcaagaggcctcatgagactttacagtgggaagaattttgttcccaagttcc 13267623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 15811688 - 15811790
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||| |||| |||||||| ||||||||||| ||||| |||||  ||| | |||| || |||||||||||||||||  |||||| |||  ||||    
T  15811688 cttgggaagacgaagattgaagatttaagaggcctcataagacgttacagagggtggaattatgttcccaagttccaagacatcttacattgaaggaaac 15811787  T
Q  101 acc 103  Q
    |||    
T  15811788 acc 15811790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 21663335 - 21663409
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 76  Q
    |||| ||||| |||||||||||||||||||||||||  ||||||||||  ||||| |||| || |||||||||||    
T  21663335 ttggcaagaccaagaatgaagattcaagaggcctcacgagactttacatagggaggaattctgttcccaagttcc 21663409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 23035166 - 23035264
Alignment:
Q  5 ggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacc 103  Q
    |||||||||||| | ||||||||||| |||||| ||||| ||||||  |||| |||| || |||||||||||||||||  |||||| |||  |||||||    
T  23035166 ggaagacaaagattcaagattcaagatgcctcataagacgttacaaaaggaggaattatgttcccaagttccaagacatcttacattgaagaaaacacc 23035264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 17543369 - 17543458
Alignment:
Q  12 aaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 101  Q
    ||||||||||||||||| ||| |||| | ||| |||||  ||||  ||||||| |||||||||||||||||  |||||||||| ||||||    
T  17543369 aaagaatgaagattcaataggtctcagacgacgttacagagggatgaattttgttcccaagttccaagacatcttacatagaaacaaaca 17543458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26647599 - 26647676
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaa 78  Q
    ||||||||||| |||| | |||||||||||||||||| ||||| |||||  ||||| ||||||| ||||| |||||||    
T  26647599 cttgggaagacgaagattcaagattcaagaggcctcataagacgttacagagggaggaattttgttcccatgttccaa 26647676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 16113373 - 16113267
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    ||||||||| |||||| |||||||| |||| ||||||| ||||| ||||||| || |||||||||  ||| ||||| | |||  |||||||| |  ||||    
T  16113373 aagaatgaatattcaataggcctcagaagaatttacaaagggaggaattttgttctcaagttccagtacattttactttgaagaaaacacctcaacaggc 16113274  T
Q  113 gaagaaa 119  Q
    |||||||    
T  16113273 gaagaaa 16113267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 18100031 - 18100137
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    ||||||||||||||||||| |||    ||||||||||| ||||  |||| | |||||||||||||||||| ||||| | |||  |||||||| |  ||||    
T  18100031 aagaatgaagattcaagagccctatgtagactttacaaagggaagaattctcctcccaagttccaagacattttactttgaagaaaacacctcaacaggc 18100130  T
Q  113 gaagaaa 119  Q
    |||||||    
T  18100131 gaagaaa 18100137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 25959702 - 25959803
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 101  Q
    |||||||||  ||||||||||||||||||||||| ||||||||||| || ||||| |||| |  || |||||| |||||||  |||||| |||  |||||    
T  25959702 ttgggaagatgaagaatgaagattcaagaggcct-aaaagactttataaagggaggaattcttttctcaagtttcaagacatcttacattgaagaaaaca 25959800  T
Q  102 cct 104  Q
    |||    
T  25959801 cct 25959803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27911918 - 27911848
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaa 71  Q
    ||||||||||| | ||||||||||||||||||||||| ||||| ||||||   ||| ||||||| ||||||    
T  27911918 cttgggaagaccatgaatgaagattcaagaggcctcagaagacattacaaacagaggaattttgttcccaa 27911848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7881648 - 7881587
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaag-aggcctcaaaagactttacaacgggagaaatt 61  Q
    |||| ||||| |||||||||||||||||| |||||||| |||||||||||| ||||| ||||    
T  7881648 cttgagaagataaagaatgaagattcaagaaggcctcataagactttacaaagggaggaatt 7881587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 33192193 - 33192124
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    |||||||| | ||||||  ||||||||||||||||||| ||||| |||| || |||||||||| ||||||    
T  33192193 aagaatgagggttcaagtcgcctcaaaagactttacaaagggaggaattctgttcccaagttctaagaca 33192124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 44796971 - 44796890
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    ||||||||||| ||||   | |||||||||||||||| ||||| |||||  ||||| |||| || |||||||||||||||||    
T  44796971 cttgggaagacgaagatcaatgattcaagaggcctcagaagacgttacagagggaggaattatgttcccaagttccaagaca 44796890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 15159041 - 15159101
Alignment:
Q  10 acaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctccca 70  Q
    ||||||||||||||||||||| ||||||||||||||   || ||||| ||||||| |||||    
T  15159041 acaaagaatgaagattcaagaagcctcaaaagacttacaaatgggaggaattttgttccca 15159101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 16363473 - 16363358
Alignment:
Q  4 gggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacc 103  Q
    |||||||  |||||||||||||| | |||||| | |||||||||||  |||||||||| |  ||||||||||||| |||  |||||  ||| |||||||     
T  16363473 gggaagattaagaatgaagattctataggccttagaagactttacagagggagaaattcttttcccaagttccaatacatcttacaatgaagcaaacaca 16363374  T
Q  104 taacaaggcgaagaaa 119  Q
    | | ||||||| ||||    
T  16363373 ttaaaaggcgaggaaa 16363358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 15527039 - 15527141
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||| |||| | |||| |||||||| ||||  |||| |||||  ||||| |||| || |||||||||||||| || ||||||| |||  ||||    
T  15527039 cttgggaagacgaagattaaagactcaagaggtctcagcagacgttacagagggaggaattatgttcccaagttccaagtcattttacattgaagaaaac 15527138  T
Q  101 acc 103  Q
    |||    
T  15527139 acc 15527141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 16180560 - 16180490
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 83  Q
    |||||||||||||||| |||| |||| ||||||||||  ||||| ||||||| || |||||| | ||||||    
T  16180560 aagaatgaagattcaaaaggcatcaagagactttacatagggaggaattttgttctcaagtttcgagacaa 16180490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 21333312 - 21333386
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttcc 76  Q
    |||||||| | ||||||| ||||||||||||||||   |||||||||| | |||| |||| || |||||||||||    
T  21333312 ttgggaaggccaagaatggagattcaagaggcctcgtgagactttacatcaggaggaattctgttcccaagttcc 21333386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 14782382 - 14782337
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagacttta 47  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  14782382 ttgggaagaccaagaatgaagattcaaaaggcctcaggagacttta 14782337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 26101701 - 26101632
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    |||||||||||||||||||| |||| |||| ||||||  |||||||||| || || || || ||||||||    
T  26101701 aagaatgaagattcaagaggtctcataagaatttacagagggagaaattctgttcacaggtcccaagaca 26101632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 35133726 - 35133657
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    |||| |||| ||||||||||||||| ||||| |||||| |||   |||| || |||||||||||||||||    
T  35133726 aagattgaatattcaagaggcctcagaagacgttacaaagggtagaattatgttcccaagttccaagaca 35133657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 9403192 - 9403120
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagtt 74  Q
    |||||||||| |||||| ||||||||||||| ||||  ||||||||||  ||||| |||| || ||| |||||    
T  9403192 ttgggaagaccaagaattaagattcaagaggtctcaggagactttacagtgggaggaattatgttccaaagtt 9403120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 9666869 - 9666901
Alignment:
Q  5 ggaagacaaagaatgaagattcaagaggcctca 37  Q
    |||||| ||||||||||||||||||||||||||    
T  9666869 ggaagataaagaatgaagattcaagaggcctca 9666901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 16786349 - 16786397
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaatt 61  Q
    |||||||||||||||| || ||||| |||||||||||  ||||||||||    
T  16786349 aagaatgaagattcaaaagacctcataagactttacagagggagaaatt 16786397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 17017090 - 17017155
Alignment:
Q  15 gaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    |||||||||||||||||| ||  |||||| |||||| ||||| ||||||  |||||||| ||||||||    
T  17017090 gaatgaagattcaagaggtcttgaaagacattacaaagggaggaatttt--tcccaagtcccaagaca 17017155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 8e-22; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 23644573 - 23644690
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    ||||| ||||||||||||||| ||| |||||||||  | || || |||| || ||||||||||||||| || |||||||||| ||||||||||| ||| |    
T  23644573 aagaaggaagattcaagaggcatcataagactttaagaaggtaggaattctgttcccaagttccaagaaaacttacatagaagcaaacacctaaaaagac 23644672  T
Q  113 gaagaaacagacatttcg 130  Q
    |||||||||| |||||||    
T  23644673 gaagaaacaggcatttcg 23644690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 22564802 - 22564928
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    ||||||||||||||||||||||    || ||||||  | ||||||||| ||| || ||||||||||||||| |||||||||| |||||| || ||||||     
T  22564802 aagaatgaagattcaagaggccaaggaacactttatgaagggagaaatattgttcacaagttccaagacaacttacatagaagcaaacatct-acaaggt 22564900  T
Q  113 gaagaaacagacatttcggcacccgaaa 140  Q
    |||||||||| |||||| ||||||||||    
T  22564901 gaagaaacaggcatttcagcacccgaaa 22564928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 9898111 - 9898229
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  |||||| |||||||||||||||||| |||| ||||||| || || ||||||  || ||||||||||||||  |||||| ||| |||||    
T  9898111 cttgggaagatgaagaataaagattcaagaggcctcagaagaatttacaaaggaaggaattttattctcaagttccaagacatcttacattgaagcaaac 9898210  T
Q  101 acctaacaaggcgaagaaa 119  Q
    |||||  ||||||||||||    
T  9898211 acctataaaggcgaagaaa 9898229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8246480 - 8246377
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  ||||||||||||||||||||||||  |||||||||||  |||| ||||| || ||||||||||||||||| || |||| |||  ||||    
T  8246480 cttgggaagatgaagaatgaagattcaagaggcctcggaagactttacagagggacaaattatgttcccaagttccaagacatttcacattgaaaaaaac 8246381  T
Q  101 acct 104  Q
    ||||    
T  8246380 acct 8246377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 3357985 - 3357915
Alignment:
Q  12 aaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    |||||||||||||||||  ||||||||||||| |||||| ||||| ||||||| |||||||||||||||||    
T  3357985 aaagaatgaagattcaaagggcctcaaaagacattacaaagggaggaattttgttcccaagttccaagaca 3357915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 22404498 - 22404575
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaag 79  Q
    |||||||||| |||||||||||||||||||||||||  ||||||||||  ||||| ||||||| ||||||||| ||||    
T  22404498 ttgggaagaccaagaatgaagattcaagaggcctcaggagactttacagtgggaggaattttgttcccaagtttcaag 22404575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 6629219 - 6629298
Alignment:
Q  3 tgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||| ||||| |||| |  ||||||  |||||||||    
T  6629219 tgggaagatgaagaatgaagattcaagaggcctcagaagactttacaaagggaggaattatattcccaatgtccaagaca 6629298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 393
Target Start/End: Complemental strand, 16449644 - 16449519
Alignment:
Q  274 tttaggattatatttatttaattgctttattaactatttaattgtt-ggcgtgttatatttgttagtta-attgggttttagagtaattaag--tatttt 369  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| ||  |||| ||||| || | || |||||||||||||| || ||||  ||||||    
T  16449644 tttaggattttatttatttaattgctttattaattatttaattgtttggtatgttttatttattgggtagattgggttttagagaaaataagggtatttt 16449545  T
Q  370 ggtg--tcgaggagtaagggtaattt 393  Q
    |||   | ||||||||||||||||||    
T  16449544 ggtaatttgaggagtaagggtaattt 16449519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 8038294 - 8038376
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 83  Q
    ||||||||||  ||||||||||||||||||||||||| |||| ||||||  |||||||| | || ||||| ||| ||||||||    
T  8038294 cttgggaagatcaagaatgaagattcaagaggcctcataagattttacagagggagaaaatatgttcccaggtttcaagacaa 8038376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 19246130 - 19246012
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  |||||||||||||||||||| |||  || ||||||||| | ||||||||||| |||| |||| |||||||  |||||  |||  ||||    
T  19246130 cttgggaagatgaagaatgaagattcaagaggtctcggaaaactttacaaagagagaaattttgttccctagtttcaagacatcttacaatgaagaaaac 19246031  T
Q  101 acctaacaaggcgaagaaa 119  Q
    |||| |  |||||||||||    
T  19246030 acctcaataggcgaagaaa 19246012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 32759823 - 32759690
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  | || |||||||||||||||||||  ||||| |||||| ||||| ||||||| ||||| || ||||||||  ||| || ||| |||||    
T  32759823 cttgggaagatcatgagtgaagattcaagaggcctcggaagacgttacaaagggaggaattttgttcccaggtcccaagacatcttatatggaagcaaac 32759724  T
Q  101 acctaacaaggcgaagaaacagacatttcggcac 134  Q
    ||| || ||  ||||||||||  ||||| |||||    
T  32759723 acccaagaaaacgaagaaacatgcatttaggcac 32759690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 10822077 - 10822010
Alignment:
Q  15 gaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    |||||||||||||| |||||||||||||| |||||| || || |||| || |||||||| ||||||||    
T  10822077 gaatgaagattcaaaaggcctcaaaagacattacaaaggaaggaattatgttcccaagtcccaagaca 10822010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 23005521 - 23005580
Alignment:
Q  16 aatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttc 75  Q
    ||||||||||||||||||||||||||||||   || ||||| ||||||| ||||||||||    
T  23005521 aatgaagattcaagaggcctcaaaagacttacaaatgggaggaattttgttcccaagttc 23005580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 23782845 - 23782786
Alignment:
Q  16 aatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttc 75  Q
    ||||||||||||||||||||||||||||||   || ||||| ||||||| ||||||||||    
T  23782845 aatgaagattcaagaggcctcaaaagacttacaaatgggaggaattttgttcccaagttc 23782786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 21547028 - 21547082
Alignment:
Q  19 gaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagt 73  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||||| || |||||    
T  21547028 gaagattcaagaggcctcaaaagacattacaaagggaggaattttgttcgcaagt 21547082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 17295932 - 17295989
Alignment:
Q  4 gggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaatt 61  Q
    |||||||  ||||||||||||||||||||||||| ||||||||| |  ||||||||||    
T  17295932 gggaagattaagaatgaagattcaagaggcctcataagactttaaagtgggagaaatt 17295989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 13216561 - 13216609
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaatt 61  Q
    ||||||||||||||||||||| ||| || ||||||||| ||||||||||    
T  13216561 aagaatgaagattcaagaggcatcataaaactttacaaagggagaaatt 13216609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 36
Target Start/End: Complemental strand, 14639140 - 14639109
Alignment:
Q  5 ggaagacaaagaatgaagattcaagaggcctc 36  Q
    ||||||||||||||||||||||||||||||||    
T  14639140 ggaagacaaagaatgaagattcaagaggcctc 14639109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 21845942 - 21845989
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttaca 49  Q
    ||||||||||||||||| |||||||||||||||| |  ||||||||||    
T  21845942 ttgggaagacaaagaataaagattcaagaggccttaggagactttaca 21845989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 22569709 - 22569607
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  ||||| ||||||||||||||||| |||| |||||| ||    ||||||| || |||||||||||||||||  |||||| |||  ||||    
T  22569709 cttgggaagatgaagaacgaagattcaagaggcct-aaaaaactttaaaaatttagaaattatgttcccaagttccaagacatcttacattgaagaaaac 22569611  T
Q  101 acct 104  Q
    ||||    
T  22569610 acct 22569607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 8066504 - 8066450
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggag 56  Q
    |||||||||| ||||||||||||||||||| ||||   ||||||||||| |||||    
T  8066504 ttgggaagaccaagaatgaagattcaagagacctcgtgagactttacaatgggag 8066450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 34479979 - 34479905
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttc 75  Q
    ||||||||||| | ||||||| ||||||||||||||||| ||  |||||| ||||| |||| || ||||| ||||    
T  34479979 cttgggaagaccatgaatgaatattcaagaggcctcaaacgatattacaaagggaggaattatgttcccatgttc 34479905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 2588137 - 2588069
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    ||||||||||||||||||||||||| || |||||| ||  |||||||||||  ||||| || ||||||||    
T  2588137 aagaatgaagattcaagaggcctcagaaaactttataa-aggagaaattttattcccatgtcccaagaca 2588069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 12991533 - 12991473
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaac-gggagaaattttgctcccaagt 73  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||| |||| || ||||||||    
T  12991533 aagaatgaagattcaagaggcctcagaagac-ttacaacagggaggaattatgttcccaagt 12991473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 45
Target Start/End: Complemental strand, 13022161 - 13022128
Alignment:
Q  12 aaagaatgaagattcaagaggcctcaaaagactt 45  Q
    |||||||||||||||||||||||||| |||||||    
T  13022161 aaagaatgaagattcaagaggcctcagaagactt 13022128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 21060658 - 21060751
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaa 106  Q
    ||||||||||||||||||||||||| ||||  |||||   ||||||||| |  |||||||  ||||||||  ||| || ||| |||||||||||    
T  21060658 aagaatgaagattcaagaggcctcagaagatgttacagaaggagaaattattttcccaagggccaagacatcttatatggaagcaaacacctaa 21060751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 21079975 - 21080068
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaa 106  Q
    ||||||||||||||||||||||| | ||||  |||||   ||||||||| |  |||||||| ||||||||  ||| || ||| |||||||||||    
T  21079975 aagaatgaagattcaagaggcctaagaagatgttacagaaggagaaattattttcccaagtgccaagacatcttatatggaagcaaacacctaa 21080068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 9387470 - 9387422
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 50  Q
    |||||| ||||| ||||| ||||||||||||||||| ||||| ||||||    
T  9387470 ttgggatgacaatgaatgtagattcaagaggcctcagaagacattacaa 9387422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1339 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 1089 - 927
Alignment:
Q  53 ggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggcgaagaaacagacatttcggcacccgaaattcgcactcatg 152  Q
    ||||||||| || ||||||||| |||||||| |||||||||| ||||| ||||| || ||||||||| || | |||| |||||||||| ||   | ||||    
T  1089 ggagaaattatgttcccaagtttcaagacaacttacatagaaacaaacgcctaaaaatgcgaagaaa-aggcgtttcagcacccgaaagtcaggcccatg 991  T
Q  153 cgccctggggatgaaaccacgtgc-tggaccatggagcaaccaggcacatgtgcctggcgcatg 215  Q
    | ||| |||||| |||||| |||| | || ||||||||||||||||||||| ||||| ||||||    
T  990 caccccggggattaaaccaagtgcctcgagcatggagcaaccaggcacatgcgcctgacgcatg 927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 88691 - 88797
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    |||||||||||||||| || ||||| |||||||||||  |||||||||| || |||||||||||||||||  |||||| ||| |||||| ||||  ||||    
T  88691 aagaatgaagattcaaaagccctcagaagactttacagagggagaaattatgttcccaagttccaagacatcttacattgaagcaaacaactaaacaggc 88790  T
Q  113 gaagaaa 119  Q
    |||||||    
T  88791 gaagaaa 88797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 202075 - 202156
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagaca 82  Q
    |||||||||||||||| ||||||||||| ||||||| |||||| |||||  ||||| ||||||| |||||||||||||||||    
T  202075 cttgggaagacaaagattgaagattcaataggcctccaaagacattacagagggaggaattttgttcccaagttccaagaca 202156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 41778 - 41860
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaa 83  Q
    |||||||||| |||||||||||||||||||||||| | |||| ||||||| ||||| ||||||| ||||||  ||||||||||    
T  41778 cttgggaagataaagaatgaagattcaagaggcctaataagaatttacaaagggaggaattttgttcccaatgtccaagacaa 41860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 10338 - 10437
Alignment:
Q  4 gggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacc 103  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||| ||||| |||| |  ||||||||||||| |||  |||||| |||  |||||||    
T  10338 gggaagatgaagaatgaagattcaagaggcctcaaaagacttcacaaagggaggaattatattcccaagttccaaaacatcttacattgaagaaaacacc 10437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 41192 - 41089
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  ||||||| ||||||||||||||||| ||||||||||||  |||| ||||||| ||  ||||| |||||||  |||||| |||  ||||    
T  41192 cttgggaagatgaagaatggagattcaagaggcctcataagactttacaaaaggaggaattttgttctaaagtttcaagacatcttacattgaagaaaac 41093  T
Q  101 acct 104  Q
    ||||    
T  41092 acct 41089  T

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Target: scaffold0111 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 21329 - 21256
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttc 75  Q
    |||| ||||| |||||||||||| ||||||||||||  ||||||||||  ||||| ||||||| ||||||||||    
T  21329 ttggaaagaccaagaatgaagatacaagaggcctcaggagactttacagtgggaggaattttgttcccaagttc 21256  T

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Target: scaffold0016 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 4677 - 4629
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaa 50  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  4677 ttgggaagacaaagagtgaagattcaagaggcctcaatagacttaacaa 4629  T

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Target: scaffold0386 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 9380 - 9431
Alignment:
Q  27 aagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaa 78  Q
    |||||||||||||||| ||||||  ||||||||||||| |||||||||||||    
T  9380 aagaggcctcaaaagattttacagagggagaaattttgttcccaagttccaa 9431  T

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Target: scaffold0386; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 5078 - 5196
Alignment:
Q  1 cttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaac 100  Q
    ||||||||||  |||||  || ||||||||||||||| |||||||||||  ||||| ||||||  |||| |||||||| |||  |||||| |||  ||||    
T  5078 cttgggaagatgaagaagcaaaattcaagaggcctcagaagactttacagagggaggaatttttttccctagttccaatacatcttacattgaagaaaac 5177  T
Q  101 acctaacaaggcgaagaaa 119  Q
    |||| |  |||||||||||    
T  5178 acctcaagaggcgaagaaa 5196  T

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Target: scaffold0360 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 16721 - 16811
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacc 103  Q
    ||||||||||||||||||||||||| || |  |||||  ||||||| | ||| |||||||||||||| ||  ||||||| || ||||||||    
T  16721 aagaatgaagattcaagaggcctcagaacatgttacagagggagaattcttgttcccaagttccaagtcatcttacataaaagcaaacacc 16811  T

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Target: scaffold0086 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 11935 - 11887
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaatt 61  Q
    ||||||||||||||||||||| ||||||||| |||||  ||||||||||    
T  11935 aagaatgaagattcaagaggcatcaaaagacgttacagagggagaaatt 11887  T

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Target: scaffold0086; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 13037 - 13156
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 101  Q
    |||||||||  | ||||||||||||||||||||||  |||   |||||| |||||||||| || || ||||| | ||||||  ||| || ||| ||||||    
T  13037 ttgggaagatcatgaatgaagattcaagaggcctcggaaggaattacaaagggagaaattatgttctcaagtcctaagacaccttatatggaagcaaaca 13136  T
Q  102 cctaacaaggcgaagaaaca 121  Q
    || || ||| ||||||||||    
T  13137 cccaaaaagacgaagaaaca 13156  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 14042 - 14148
Alignment:
Q  13 aagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaacacctaacaaggc 112  Q
    |||||| ||||||||||||||||||||| || |||||| ||||  |||| |  || ||||||||||||||  ||| ||  || |||||||| || ||| |    
T  14042 aagaatcaagattcaagaggcctcaaaatacgttacaaagggattaattctcttctcaagttccaagacatcttatatgaaagcaaacacccaaaaagac 14141  T
Q  113 gaagaaa 119  Q
    |||||||    
T  14142 gaagaaa 14148  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 23855 - 23822
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcct 35  Q
    |||||||||||| |||||||||||||||||||||    
T  23855 ttgggaagacaatgaatgaagattcaagaggcct 23822  T

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Target: scaffold0072 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 38144 - 38020
Alignment:
Q  2 ttgggaagacaaagaatgaagattcaagaggcctcaaaagactttacaacgggagaaattttgctcccaagttccaagacaatttacatagaatcaaaca 101  Q
    |||||||||  | ||||||||| | ||||||||||||||||  ||| |  ||||||||||||| ||||| || ||||||||  ||| || | | ||||||    
T  38144 ttgggaagatcatgaatgaagaattaagaggcctcaaaagatattatagagggagaaattttggtcccaggtcccaagacatcttatatggtagcaaaca 38045  T
Q  102 cctaacaaggcgaagaaacagacat 126  Q
    || || | | ||| |||||||||||    
T  38044 cccaaaaggacgaggaaacagacat 38020  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 392997 - 392941
Alignment:
Q  87 acatagaatcaaacacctaacaaggcgaagaaacagacatttcggcacccgaaattc 143  Q
    |||||||| ||||||||||| ||||| ||||||||| | ||| |||||||| |||||    
T  392997 acatagaagcaaacacctaaaaaggcaaagaaacaggcgttttggcacccggaattc 392941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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