View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13002_low_6 (Length: 384)

Name: NF13002_low_6
Description: NF13002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13002_low_6
NF13002_low_6
[»] chr5 (14 HSPs)
chr5 (23-372)||(17149462-17149808)
chr5 (144-217)||(84865-84938)
chr5 (141-210)||(16457848-16457917)
chr5 (145-208)||(15416215-15416278)
chr5 (171-217)||(4793042-4793088)
chr5 (144-206)||(30883171-30883233)
chr5 (140-217)||(16436654-16436730)
chr5 (144-215)||(87388-87458)
chr5 (187-217)||(17155906-17155936)
chr5 (148-202)||(18974005-18974059)
chr5 (171-217)||(35705054-35705100)
chr5 (144-217)||(8278237-8278310)
chr5 (144-217)||(29075822-29075895)
chr5 (144-217)||(37258328-37258401)
[»] chr1 (29 HSPs)
chr1 (144-217)||(24047064-24047137)
chr1 (141-210)||(43446001-43446070)
chr1 (141-210)||(31605817-31605886)
chr1 (145-217)||(21392879-21392951)
chr1 (141-217)||(17297022-17297099)
chr1 (145-210)||(51814536-51814601)
chr1 (145-215)||(8904456-8904526)
chr1 (144-217)||(6122835-6122908)
chr1 (144-217)||(8177144-8177217)
chr1 (145-217)||(1094567-1094639)
chr1 (141-205)||(36428750-36428814)
chr1 (145-217)||(44961807-44961879)
chr1 (142-210)||(45266873-45266941)
chr1 (144-210)||(52029905-52029972)
chr1 (144-217)||(2799903-2799976)
chr1 (148-217)||(3799951-3800020)
chr1 (144-217)||(16893435-16893508)
chr1 (144-217)||(18037575-18037648)
chr1 (144-217)||(27476733-27476806)
chr1 (144-217)||(31794226-31794299)
chr1 (144-217)||(33700735-33700808)
chr1 (144-217)||(36371511-36371584)
chr1 (144-217)||(42412642-42412715)
chr1 (144-217)||(52116743-52116816)
chr1 (141-205)||(6127961-6128024)
chr1 (145-217)||(13578679-13578751)
chr1 (145-217)||(15065007-15065079)
chr1 (141-217)||(39966131-39966207)
chr1 (141-205)||(41470585-41470648)
[»] chr4 (31 HSPs)
chr4 (141-217)||(32992650-32992726)
chr4 (142-217)||(46295136-46295211)
chr4 (144-217)||(51250484-51250557)
chr4 (144-217)||(8030166-8030239)
chr4 (144-217)||(23377997-23378070)
chr4 (171-217)||(27104990-27105036)
chr4 (141-202)||(5795386-5795447)
chr4 (141-210)||(8325348-8325417)
chr4 (144-217)||(26605674-26605747)
chr4 (144-217)||(37274421-37274494)
chr4 (144-217)||(49576856-49576929)
chr4 (141-217)||(30938181-30938257)
chr4 (145-217)||(31826651-31826723)
chr4 (141-217)||(51622523-51622599)
chr4 (171-210)||(22096577-22096616)
chr4 (171-210)||(49262653-49262692)
chr4 (144-210)||(19238546-19238612)
chr4 (147-217)||(20770955-20771025)
chr4 (171-217)||(23491991-23492037)
chr4 (171-217)||(26356885-26356931)
chr4 (144-210)||(39509111-39509177)
chr4 (171-217)||(39927168-39927214)
chr4 (144-210)||(46329205-46329271)
chr4 (144-217)||(7292760-7292833)
chr4 (144-217)||(7949416-7949489)
chr4 (145-214)||(15729524-15729593)
chr4 (144-217)||(28635737-28635810)
chr4 (144-217)||(51969058-51969131)
chr4 (169-217)||(3606984-3607032)
chr4 (141-205)||(37980122-37980185)
chr4 (147-195)||(44865378-44865426)
[»] chr2 (19 HSPs)
chr2 (141-217)||(41908600-41908676)
chr2 (145-217)||(37480117-37480189)
chr2 (141-216)||(30359692-30359766)
chr2 (144-217)||(19016072-19016145)
chr2 (144-210)||(23052492-23052558)
chr2 (144-210)||(42327364-42327430)
chr2 (144-217)||(7798998-7799070)
chr2 (145-210)||(19244151-19244216)
chr2 (144-209)||(26482134-26482198)
chr2 (144-217)||(42602595-42602668)
chr2 (144-217)||(42860389-42860462)
chr2 (171-217)||(14780574-14780620)
chr2 (144-210)||(39715033-39715099)
chr2 (144-217)||(21195638-21195711)
chr2 (144-217)||(23230567-23230640)
chr2 (144-217)||(29503312-29503384)
chr2 (172-217)||(41390292-41390337)
chr2 (141-217)||(12517716-12517791)
chr2 (146-217)||(18372820-18372892)
[»] chr8 (16 HSPs)
chr8 (144-217)||(28783101-28783174)
chr8 (141-217)||(11793483-11793559)
chr8 (144-210)||(2203533-2203599)
chr8 (144-217)||(11819817-11819890)
chr8 (145-214)||(19703452-19703521)
chr8 (142-210)||(35287755-35287823)
chr8 (145-217)||(40872918-40872990)
chr8 (144-217)||(968403-968476)
chr8 (144-217)||(11492035-11492108)
chr8 (144-217)||(16852381-16852454)
chr8 (146-195)||(28787480-28787529)
chr8 (144-217)||(44780076-44780149)
chr8 (141-217)||(26688903-26688979)
chr8 (141-217)||(27979195-27979271)
chr8 (141-217)||(28036464-28036540)
chr8 (145-217)||(31408084-31408156)
[»] chr7 (27 HSPs)
chr7 (144-217)||(37085511-37085584)
chr7 (144-207)||(22760904-22760967)
chr7 (144-217)||(2446349-2446422)
chr7 (172-217)||(11720922-11720967)
chr7 (144-217)||(21877849-21877922)
chr7 (144-210)||(18056744-18056810)
chr7 (145-215)||(38374563-38374633)
chr7 (144-210)||(42711999-42712065)
chr7 (144-217)||(7309397-7309469)
chr7 (144-217)||(16355758-16355831)
chr7 (144-217)||(43590948-43591021)
chr7 (141-209)||(5579204-5579272)
chr7 (146-217)||(17040974-17041045)
chr7 (146-217)||(30217922-30217993)
chr7 (144-210)||(5830572-5830638)
chr7 (171-217)||(45228987-45229033)
chr7 (144-217)||(279916-279989)
chr7 (145-210)||(11700207-11700271)
chr7 (144-217)||(19553494-19553567)
chr7 (144-217)||(20335793-20335866)
chr7 (144-217)||(23301564-23301637)
chr7 (144-217)||(33181172-33181245)
chr7 (142-191)||(33440744-33440793)
chr7 (145-217)||(5273552-5273624)
chr7 (141-217)||(31835230-31835306)
chr7 (169-217)||(41975953-41976001)
chr7 (169-217)||(45559257-45559305)
[»] chr6 (15 HSPs)
chr6 (144-217)||(12188265-12188338)
chr6 (144-217)||(24641152-24641225)
chr6 (152-217)||(8597709-8597774)
chr6 (148-217)||(13441102-13441171)
chr6 (171-217)||(2484788-2484834)
chr6 (171-217)||(18263908-18263954)
chr6 (144-217)||(18562600-18562673)
chr6 (144-217)||(21418511-21418584)
chr6 (171-217)||(9539717-9539763)
chr6 (144-210)||(10338143-10338209)
chr6 (148-217)||(6385907-6385976)
chr6 (144-217)||(12633050-12633123)
chr6 (144-217)||(20213082-20213155)
chr6 (144-217)||(22107105-22107178)
chr6 (145-217)||(34444845-34444917)
[»] scaffold0172 (1 HSPs)
scaffold0172 (142-217)||(15739-15814)
[»] chr3 (26 HSPs)
chr3 (144-217)||(8075089-8075162)
chr3 (143-215)||(19716237-19716309)
chr3 (145-217)||(20501738-20501809)
chr3 (145-217)||(45699890-45699962)
chr3 (145-216)||(29228853-29228924)
chr3 (144-215)||(47236935-47237006)
chr3 (144-210)||(31520574-31520640)
chr3 (144-217)||(4844473-4844546)
chr3 (144-217)||(4870169-4870242)
chr3 (144-217)||(10445101-10445174)
chr3 (144-217)||(14339651-14339724)
chr3 (148-217)||(25035750-25035819)
chr3 (141-214)||(26871469-26871542)
chr3 (144-217)||(37788428-37788500)
chr3 (144-217)||(44743817-44743890)
chr3 (144-217)||(51903840-51903913)
chr3 (141-217)||(47454579-47454655)
chr3 (145-216)||(26411587-26411658)
chr3 (155-217)||(21029609-21029671)
chr3 (272-331)||(24434249-24434310)
chr3 (144-217)||(30715783-30715855)
chr3 (145-198)||(40063661-40063714)
chr3 (144-196)||(17765168-17765220)
chr3 (144-196)||(19066488-19066540)
chr3 (141-217)||(44069796-44069872)
chr3 (141-217)||(54990740-54990816)
[»] scaffold0211 (1 HSPs)
scaffold0211 (187-217)||(24137-24167)
[»] scaffold0006 (1 HSPs)
scaffold0006 (148-217)||(18344-18412)
[»] scaffold0115 (1 HSPs)
scaffold0115 (153-217)||(42626-42690)
[»] scaffold0008 (1 HSPs)
scaffold0008 (145-217)||(49348-49420)


Alignment Details
Target: chr5 (Bit Score: 266; Significance: 1e-148; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 23 - 372
Target Start/End: Complemental strand, 17149808 - 17149462
Alignment:
Q  23 agctcctaccttcctttttgcatttctcactctttaaagctattttgaactttgacccccctaaatccatcaataaaaattatagtaattacatgatgtt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17149808 agctcctaccttcctttttgcatttctcactctttaaagctattttgaactttgacccccctaaatccatcaataaaaattatagtaatcacatgatgtt 17149709  T
Q  123 acattttagatttcaatacttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttcttnnnnn 222  Q
    |||||||||||||||||||||||| |||||| || |||||||||||| ||||||||||||||| || || |||||||||||||||||||||||||         
T  17149708 acattttagatttcaatacttggattgtgcttcttctcaagatttgaggttcgattctccccattgtcagtttgagtgggctaatttaacttctt---aa 17149612  T
Q  223 nnnnnnnntcaaaactcatttgcttaaatctactaattgagggacccggattccatgcatttagaaaatcacatttacatacatgaattaatcttggcca 322  Q
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17149611 aaaaaaaatcaaaactcatttgcttaaatctactaattgagggacccggattccatgcatttagaaaatcacatttacatacatgaattaatcttggtca 17149512  T
Q  323 tcgacttgaaatcaacgacacacatgaaataatttttaccattgatttca 372  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17149511 tcgacttgagatcaacgacacacatgaaataatttttaccattgatttca 17149462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 84865 - 84938
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| | | |||||||||||||||| |||||| | || ||||||||||||| ||||||    
T  84865 ggagtgtgctcctcctcaaggtctcaagttcgattctccccggtgccattatgggtgggctaatttagcttctt 84938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 16457848 - 16457917
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    ||||||||||||||||||||||| | | | |||| ||||||||| ||||||||||| |||||||| ||||    
T  16457848 cttggagtgtgctcctcctcaaggtctcatgttcaattctccccggtgccaatttgcgtgggctagttta 16457917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 15416215 - 15416278
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatt 208  Q
    |||||||||||||||||||   ||| ||||||||||| |||||| ||||||||||| |||||||    
T  15416215 gagtgtgctcctcctcaaggactgatgttcgattctctccagtgtcaatttgagtgagctaatt 15416278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 4793088 - 4793042
Alignment:
Q  171 gttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||    
T  4793088 gttcgattctccccagtgccaatttaggtgggctaatttagcttctt 4793042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 30883233 - 30883171
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaa 206  Q
    |||||||||||||||||||| | | |||||| |||||| |||||| ||||||| |||||||||    
T  30883233 ggagtgtgctcctcctcaaggtctcaagttcaattctcaccagtgtcaatttgggtgggctaa 30883171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 16436654 - 16436730
Alignment:
Q  140 acttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||||||| | | | |||||||| | | ||||  ||||||||||| ||||||||||||||||    
T  16436654 acttggagtgtgctcctcctcaaggtctcatgttcgatt-ttcacagtatcaatttgagtgagctaatttaacttctt 16436730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 87458 - 87388
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttc 215  Q
    |||||||||||||||||||| | | | ||| ||||| | |||||| ||||||||||||||||||||| ||||    
T  87458 ggagtgtgctcctcctcaaggtctcaggtttgattc-ctccagtgtcaatttgagtgggctaatttagcttc 87388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 217
Target Start/End: Original strand, 17155906 - 17155936
Alignment:
Q  187 tgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||||||||||||||    
T  17155906 tgccaatttgagtgggctaatttaacttctt 17155936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 18974005 - 18974059
Alignment:
Q  148 tgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtggg 202  Q
    |||||||||||||||| | | | |||||||||||||  |||||||||||||||||    
T  18974005 tgtgctcctcctcaaggtgtcaggttcgattctccctggtgccaatttgagtggg 18974059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 35705054 - 35705100
Alignment:
Q  171 gttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||| ||| ||||||| ||||||||||||| ||||||    
T  35705054 gttcgattctccccggtgtcaatttgggtgggctaatttagcttctt 35705100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 8278310 - 8278237
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| |||| | ||||| |||| || || ||||| ||||  ||||||||||||| ||||||    
T  8278310 ggagtgtgctcctcctcgagatctcaagtttgattatctccggtgccgatttaggtgggctaatttagcttctt 8278237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 29075822 - 29075895
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| |||| | | ||||||||||| |  ||||||||||   |||||||||||| ||||||    
T  29075822 ggagtgtgctcctcctcgagatctcatgttcgattctctctggtgccaatttagatgggctaatttagcttctt 29075895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 37258401 - 37258328
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| ||| | ||||||||||| |  ||| ||||||||| ||| || |||| ||||||    
T  37258401 ggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgtcaatttgagggggttagtttagcttctt 37258328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 24047137 - 24047064
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||||||||  || |||||||||||||||||    
T  24047137 ggagtgtgctcctcctcgaggtttcaagttcgattctccccagtgccaatttaggttggctaatttaacttctt 24047064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 43446001 - 43446070
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    ||||||||||||||||||||||| | | | |||||||||||||| |||||||||||||||||||| ||||    
T  43446001 cttggagtgtgctcctcctcaaggtctcatgttcgattctccccggtgccaatttgagtgggctagttta 43446070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 31605886 - 31605817
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    |||| |||||||||||||||||| | | |||||||||||||||| ||||||||||| |||||||| ||||    
T  31605886 cttgaagtgtgctcctcctcaaggtctcaagttcgattctccccggtgccaatttgggtgggctagttta 31605817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 21392879 - 21392951
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||||| | | | ||||||| |||| | |||||| |||||||||||||||||||||||||    
T  21392879 gagtgtgctcctcctcaaggtctcaggttcgatcctcctctgtgccagtttgagtgggctaatttaacttctt 21392951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 17297022 - 17297099
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccag-tgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||||||||| | | | ||| |||||||||| | |||||||||| ||||||||||||| ||||||    
T  17297022 cttggagtgtgctcctcctcaaggtctcatgtttgattctcccccggtgccaatttgggtgggctaatttagcttctt 17297099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 51814536 - 51814601
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    ||||||||||||||||||| | | | ||||||||||| || ||||||||||| |||||||||||||    
T  51814536 gagtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaatttgggtgggctaattta 51814601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 8904456 - 8904526
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttc 215  Q
    ||||||||||||||||||| | | ||||||||||||| |  ||||||||||||| ||| || |||||||||    
T  8904456 gagtgtgctcctcctcaaggtctcaagttcgattctctctggtgccaatttgagggggttagtttaacttc 8904526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 6122835 - 6122908
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| | | | ||||||||| | | |||| ||||||| ||||||||||||| ||||||    
T  6122835 ggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 6122908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 8177217 - 8177144
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| ||| | ||||||||||| |  ||||||||||||| ||| || |||| ||||||    
T  8177217 ggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgccaatttgagggggttagtttagcttctt 8177144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 1094567 - 1094639
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||| | || | | || |||||||||| || ||||||||||  ||||||||||||||||||||    
T  1094567 gagtgtgctcctccacgaggtctcaaattcgattctctccggtgccaatttaggtgggctaatttaacttctt 1094639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 36428750 - 36428814
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggcta 205  Q
    |||||||| |||||||||||||| | | | ||| |||||||||| ||||||||||| ||||||||    
T  36428750 cttggagtatgctcctcctcaaggtctcatgtttgattctccccggtgccaatttgggtgggcta 36428814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 44961807 - 44961879
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| | | | | ||||||||||| | |||| ||||||| ||||||||||||| ||||||    
T  44961807 gagtgtgctcctcctcagggtctcaggttcgattctctctagtgtcaatttgggtgggctaatttagcttctt 44961879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 45266873 - 45266941
Alignment:
Q  142 ttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    ||||||| |||||||||||||| | | | |||||||||||||| |||||||||||  ||||||| ||||    
T  45266873 ttggagtttgctcctcctcaaggtctcaggttcgattctccccggtgccaatttggatgggctagttta 45266941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 52029972 - 52029905
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccag-tgccaatttgagtgggctaattta 210  Q
    ||||||||||||| |||||| | | | |||||||||||||| | |||||||||| |||||||||||||    
T  52029972 ggagtgtgctccttctcaaggtctcaggttcgattctcccccgatgccaatttgggtgggctaattta 52029905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 2799903 - 2799976
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| | | | ||||||||||| |  ||||||||||||| ||| || |||| ||||||    
T  2799903 ggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtttagcttctt 2799976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 3799951 - 3800020
Alignment:
Q  148 tgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||| |  ||| | ||||||||||| | |||||||||||  ||||||||||||| ||||||    
T  3799951 tgtgctcctcctcgaagtttcaggttcgattctctctagtgccaatttaggtgggctaatttagcttctt 3800020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 16893435 - 16893508
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||| ||||||||| || | | | |||||||| || || ||| ||||||||||||||||||||| ||||||    
T  16893435 ggagtgtactcctcctcgaggtctcaggttcgattttctccggtgtcaatttgagtgggctaatttagcttctt 16893508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 18037648 - 18037575
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||  || |||| | ||||||||||||| || ||||| ||||  ||||||||||||| ||||||    
T  18037648 ggagtgtgctccttttcgagatctcaagttcgattctctccggtgccgatttaggtgggctaatttagcttctt 18037575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 27476806 - 27476733
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| |||| | ||||| ||||||| |  ||||| ||||  ||||||||||||| ||||||    
T  27476806 ggagtgtgctcctcctcgagatctcaagtttgattctctctggtgccgatttaggtgggctaatttagcttctt 27476733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 31794299 - 31794226
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| | |  |||||||||| | |  ||| ||||||| ||||||||||||| ||||||    
T  31794299 ggagtgtgctcctcctcaaggtctagagttcgattccctctggtgtcaatttgggtgggctaatttagcttctt 31794226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 33700808 - 33700735
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| | | | ||||||||||| |  |||||||||| || ||| || |||||||||||    
T  33700808 ggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaagggggttagtttaacttctt 33700735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 36371511 - 36371584
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| | ||| ||||||||||| |   |||||||||||| ||| || |||| ||||||    
T  36371511 ggagtgtgctcctcctcaaggtctgaggttcgattctctctgatgccaatttgagggggttagtttagcttctt 36371584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 42412715 - 42412642
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||| |||||||||| | | |||| ||||| || |||| ||||||||||  |||| |||||||||||    
T  42412715 ggagtgtgctcttcctcaagatcttatgttcaattcttcctagtgtcaatttgagtatgctagtttaacttctt 42412642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 52116816 - 52116743
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||  | | | |||| |||||||| ||||||||||   ||||||||||||| ||||||    
T  52116816 ggagtgtgctcctcctcaatgtctcaggttcaattctccctagtgccaattaaggtgggctaatttagcttctt 52116743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 6128024 - 6127961
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggcta 205  Q
    ||||||| ||||||||| ||||| | | |||||||||||||||| ||||||||||  ||||||||    
T  6128024 cttggagcgtgctcctc-tcaaggtctcaagttcgattctccccggtgccaattttggtgggcta 6127961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 13578751 - 13578679
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||| || || ||| |||||||||||  | ||||||||||   |||||||| ||||||||||    
T  13578751 gagtgtgctcctccttaaaatctgaggttcgattctcttcggtgccaatttagatgggctaacttaacttctt 13578679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 15065007 - 15065079
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||| |||||||| | | | |||| ||| ||||| ||| ||||||| ||||||||||||| ||||||    
T  15065007 gagtgtgctcatcctcaaggtctcaggttcaattttccccggtgtcaatttgggtgggctaatttagcttctt 15065079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 39966131 - 39966207
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||| |||||||||||| | | | ||||| |||||||| |||| |||||| ||| |||| |||| ||||||    
T  39966131 cttggagtgtactcctcctcaaggtctcaggttcgtttctccccggtgctaatttgggtgtgctagtttagcttctt 39966207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 41470648 - 41470585
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggcta 205  Q
    |||||||| |||||||| ||||| | | ||||||||||| || |||||||||||| |||||||||    
T  41470648 cttggagtatgctcctc-tcaaggtctcaagttcgattccccacagtgccaatttcagtgggcta 41470585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 32992650 - 32992726
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||||||||| | | |||||||||||||||| ||| |||||||||||| ||| |||| ||||||    
T  32992650 cttggagtgtgctcctcctcaaggtctcaagttcgattctccccggtgtcaatttgagtggactagtttagcttctt 32992726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 46295136 - 46295211
Alignment:
Q  142 ttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||||| | | | |||||||||||||| ||||||||||| |||||||| |||| ||||||    
T  46295136 ttggagtgtgctcctcctcaaggtctcaggttcgattctccccggtgccaatttgggtgggctagtttagcttctt 46295211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 51250557 - 51250484
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||| ||||||||| | ||||||||||| | || ||||||||||| ||||||||||||| ||||||    
T  51250557 ggagtgtgctccgcctcaagatctcaagttcgattccctccggtgccaatttgggtgggctaatttagcttctt 51250484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 8030239 - 8030166
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| | | ||||||||||| | | |||| ||||||| ||||||||||||| ||||||    
T  8030239 ggagtgtgctcctcctcaaggtctcaagttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 8030166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 23377997 - 23378070
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| | | | ||||||||||| | |||||||||||||| |||||| |||| ||||||    
T  23377997 ggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgagggggctagtttagcttctt 23378070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 27105036 - 27104990
Alignment:
Q  171 gttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||| || ||| ||||||||||||||||||||||||||||    
T  27105036 gttcgattctctccggtgtcaatttgagtgggctaatttaacttctt 27104990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 5795447 - 5795386
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtggg 202  Q
    |||||||| |||||||||||||| | | | ||| |||||||||||||||||||||| |||||    
T  5795447 cttggagtatgctcctcctcaaggtctcaggtttgattctccccagtgccaatttgggtggg 5795386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 8325417 - 8325348
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    |||||||||||||| |||||||| | | | |||||||||||||| ||| ||||||| |||||||| ||||    
T  8325417 cttggagtgtgctcatcctcaaggtcttaggttcgattctccccggtgtcaatttgggtgggctagttta 8325348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 26605747 - 26605674
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||| |||||| ||| ||||||||||||||| ||||  | |||| ||| ||||||||| ||||||    
T  26605747 ggagtgtgctccttctcaagttttcaagttcgattctccctagtgttagtttgtgtgtgctaatttagcttctt 26605674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 37274494 - 37274421
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| | | | ||||||||||| |  |||| ||||| |||||||||||||| ||||||    
T  37274494 ggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgctaatttaagtgggctaatttagcttctt 37274421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 49576929 - 49576856
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| | | | ||||||||||| ||| || ||||||| |||| |||| ||||||||||    
T  49576929 ggagtgtgctcctcctcaaggtctcaggttcgattctctccaatgtcaatttgggtggactaacttaacttctt 49576856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 30938257 - 30938181
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| || | | | ||||||||||||||| |||||||||  ||||| || |||| ||||||    
T  30938257 cttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggttagtttagcttctt 30938181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 31826651 - 31826723
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||||| | | ||||||||||| |   |||| ||||||| ||||||||||||| ||||||    
T  31826651 gagtgtgctcctcctcaaggtctcaagttcgattccctttagtgtcaatttgggtgggctaatttaccttctt 31826723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 51622523 - 51622599
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||||||||| | | | |||||| |||| |  ||||||||||| |||||| |||||| ||||||    
T  51622523 cttggagtgtgctcctcctcaaggtctcaggttcgactctctctggtgccaatttgggtgggccaatttagcttctt 51622599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 22096616 - 22096577
Alignment:
Q  171 gttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  22096616 gttcgattctccctagtgccaatttaagtgggctaattta 22096577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 49262692 - 49262653
Alignment:
Q  171 gttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  49262692 gttcgattctccccagtgccaatttaggtgggctaattta 49262653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 19238612 - 19238546
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    ||||||||||||||||| || | |   |||||||||||||| || |||||||| |||||||||||||    
T  19238612 ggagtgtgctcctcctcgaggtctcgggttcgattctccccggtaccaatttgggtgggctaattta 19238546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 20770955 - 20771025
Alignment:
Q  147 gtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||| |||| |||||| | | ||||||||||||| |  ||||||||||||| ||| ||||||||||||||    
T  20770955 gtgtgttccttctcaaggtctcaagttcgattctctcaggtgccaatttgagggggttaatttaacttctt 20771025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 23492037 - 23491991
Alignment:
Q  171 gttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||| || |||||||||  ||||||||||||||||||||    
T  23492037 gttcgattctcctcattgccaatttaggtgggctaatttaacttctt 23491991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 26356885 - 26356931
Alignment:
Q  171 gttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||||||||  |||||||| |||| ||||||    
T  26356885 gttcgattctccccagtgccaatttaggtgggctagtttagcttctt 26356931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 39509111 - 39509177
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    ||||||||||||||||| || | | | |||||||||||||||||| ||||||  ||||| |||||||    
T  39509111 ggagtgtgctcctcctcgaggtctcaggttcgattctccccagtggcaatttaggtgggttaattta 39509177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 39927168 - 39927214
Alignment:
Q  171 gttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||  ||  |||||||||||||||||||||||||||    
T  39927168 gttcgattctccccgatgttaatttgagtgggctaatttaacttctt 39927214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 46329205 - 46329271
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    |||||||||||||||||||| | | | |||||||||| ||| ||||||||||| ||  |||||||||    
T  46329205 ggagtgtgctcctcctcaaggtatcaggttcgattcttcccggtgccaatttgggtaagctaattta 46329271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 7292833 - 7292760
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||  | | | ||||||||||| | |||||||||||||| ||| || |||| ||||||    
T  7292833 ggagtgtgctcctcctcaaagtctcaggttcgattctctctagtgccaatttgagggggttagtttagcttctt 7292760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 7949489 - 7949416
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| | | | ||||||||||| |  ||| ||||||  ||||||||||||| ||||||    
T  7949489 ggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaggtgggctaatttagcttctt 7949416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 15729524 - 15729593
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaactt 214  Q
    |||||||||||||||| |  | | ||||||||||||| || ||| |||||||| |||||| |||||||||    
T  15729524 gagtgtgctcctcctcgatgtctcaagttcgattctcaccggtgtcaatttgattgggctgatttaactt 15729593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 28635737 - 28635810
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||  || | | | ||||||||||| |  ||||||||||| ||||||||||||| ||||||    
T  28635737 ggagtgtgctcctcctggaggtcttaggttcgattctctctggtgccaatttgggtgggctaatttagcttctt 28635810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 51969058 - 51969131
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| ||| | ||||  ||||| |  |||||||||||  ||| |||||||||||||||    
T  51969058 ggagtgtgctcctcctcaaggtttcaggttcatttctctctggtgccaatttggatggactaatttaacttctt 51969131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 3607032 - 3606984
Alignment:
Q  169 aagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||| ||| |||| ||||||  ||||||||||||||||||||    
T  3607032 aagttcgattccccctagtgtcaatttaggtgggctaatttaacttctt 3606984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 37980185 - 37980122
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggcta 205  Q
    ||||||||||||||||| ||||| | | | |||||||||||||||||| |||||| || ||||||    
T  37980185 cttggagtgtgctcctc-tcaaggtctcaggttcgattctccccagtgtcaatttcagcgggcta 37980122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 44865378 - 44865426
Alignment:
Q  147 gtgtgctcctcctcaagatttgaagttcgattctccccagtgccaattt 195  Q
    ||||||||||||||||| | | | |||||||||||||| ||||||||||    
T  44865378 gtgtgctcctcctcaaggtcttaggttcgattctcccctgtgccaattt 44865426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 41908676 - 41908600
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||||||||| | | |||||||||| ||||| ||||||||||| |||||||| |||| ||||||    
T  41908676 cttggagtgtgctcctcctcaaggtctcaagttcgattatccccggtgccaatttgggtgggctagtttagcttctt 41908600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 37480117 - 37480189
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||||| | | | |||||||||||||| || |||||||| ||||||||||||| ||||||    
T  37480117 gagtgtgctcctcctcaaggtctcaggttcgattctccccggtcccaatttgggtgggctaatttagcttctt 37480189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 30359692 - 30359766
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttct 216  Q
    ||||||||||||||||||||||| | | |  ||||||||||||||||||||||||| |||||||| |||| |||||    
T  30359692 cttggagtgtgctcctcctcaaggtctcat-ttcgattctccccagtgccaatttgggtgggctagtttagcttct 30359766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 19016072 - 19016145
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| || | | ||||| |||||||||| |||||||||| ||| |||||||||| ||||||    
T  19016072 ggagtgtgctcctcctcgaggtctcaagtttgattctccccggtgccaatttaagtaggctaatttagcttctt 19016145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 23052558 - 23052492
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    |||||||||| ||||||||| | | | ||||||||||||| ||||||| |||| |||||||||||||    
T  23052558 ggagtgtgcttctcctcaaggtctcaggttcgattctccctagtgccagtttgggtgggctaattta 23052492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 42327430 - 42327364
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    |||||||||||||||||||| | | | |||||||||||  | ||||||||||| |||||||||||||    
T  42327430 ggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaatttgggtgggctaattta 42327364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 7799070 - 7798998
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| |||| | |  |||||||||| ||||||||||||| ||| |||||||||| ||||||    
T  7799070 ggagtgtgctcctcctcgagatctcagattcgattctctccagtgccaatttaagt-ggctaatttagcttctt 7798998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 19244151 - 19244216
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    |||||||||||||| |||| | | | ||||||||||| |  |||||||||||||||||||||||||    
T  19244151 gagtgtgctcctccccaaggtctcaggttcgattctctctggtgccaatttgagtgggctaattta 19244216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 26482134 - 26482198
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattt 209  Q
    |||||||||||||| ||||| | | | |||||||||||| |||||||||||| |||||||||||||    
T  26482134 ggagtgtgctcctc-tcaaggtctcaggttcgattctcctcagtgccaatttcagtgggctaattt 26482198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 42602595 - 42602668
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||| |||||| | | | ||| ||||||| || ||||||||||| ||||||||||||| ||||||    
T  42602595 ggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaatttgggtgggctaatttagcttctt 42602668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 42860389 - 42860462
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| || | | ||||||||||| |  | |||| | |||||||||||||||||||||||||    
T  42860389 ggagtgtgctcctcctcgaggtctcaagttcgattcccgtcggtgctagtttgagtgggctaatttaacttctt 42860462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 14780574 - 14780620
Alignment:
Q  171 gttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||| ||||||  |||||||||||||||||||||||| ||||||    
T  14780574 gttcgatcctccccgatgccaatttgagtgggctaatttagcttctt 14780620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 39715033 - 39715099
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    ||||||||||||||||| || | | | ||||||||||||||||  |||||||  |||||||||||||    
T  39715033 ggagtgtgctcctcctcgaggtctcaggttcgattctccccagcaccaatttaggtgggctaattta 39715099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 21195711 - 21195638
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| | | | ||||||||| | | |||| |||||||  |||||||||||| ||||||    
T  21195711 ggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgggctaatttagcttctt 21195638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 23230640 - 23230567
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||  ||  | |||| |||||| |||||| |||||||  || ||||||||||||||||    
T  23230640 ggagtgtgctcctcctcaaagttccaggttcaattctctccagtgtcaatttggatgagctaatttaacttctt 23230567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 29503312 - 29503384
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| | | | |||||||||| ||| ||| |||||| ||||||| |||||| ||||||    
T  29503312 ggagtgtgctcctcctcaaggtctcaggttcgattct-cccggtgtcaatttaagtgggcaaatttagcttctt 29503384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 41390292 - 41390337
Alignment:
Q  172 ttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||  | ||||||||||| ||||||||||||||||||||    
T  41390292 ttcgattctcttcggtgccaatttgggtgggctaatttaacttctt 41390337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 12517791 - 12517716
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||| |||||||||||||| | | | ||| |||||||||  ||||||| ||| ||||||||||||| ||||||    
T  12517791 cttggagtttgctcctcctcaaggtctcatgtttgattctccctggtgccaa-ttgggtgggctaatttagcttctt 12517716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 18372820 - 18372892
Alignment:
Q  146 agtgtgctcctcctcaagatttgaagttc-gattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||| ||||||||||||| ||||  || ||||||| || |||| ||||| | |||||||||||||||||||    
T  18372820 agtgtgttcctcctcaagatctgaaagtctgattctctccggtgctaatttaaatgggctaatttaacttctt 18372892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 28783101 - 28783174
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| | | | |||||||||||| | ||||||||||| ||||||||||||| ||||||    
T  28783101 ggagtgtgctcctcctcaaggtctcatgttcgattctcctcggtgccaatttgggtgggctaatttagcttctt 28783174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 11793559 - 11793483
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||||||||| | | | ||| |||||| ||| ||||||||||| |||||||| |||| ||||||    
T  11793559 cttggagtgtgctcctcctcaaggtcttaggtttgattcttcccggtgccaatttgggtgggctagtttagcttctt 11793483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 2203533 - 2203599
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    |||||||||||||||||||| | | | | || ||||||||| ||||||||||| |||||||||||||    
T  2203533 ggagtgtgctcctcctcaaggtctcagggtcaattctccccggtgccaatttgggtgggctaattta 2203599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 11819817 - 11819890
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| | | | ||||||||| | | |||| ||||||| ||||||||||||| ||||||    
T  11819817 ggagtgtgctcctcctcaaggtctcaggttcgattcactctagtgtcaatttgggtgggctaatttagcttctt 11819890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 214
Target Start/End: Complemental strand, 19703521 - 19703452
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaactt 214  Q
    ||||||||||||||||||| | | | ||||||||||||| |||| |||||   |||||||||||||||||    
T  19703521 gagtgtgctcctcctcaaggtctcaggttcgattctccctagtgtcaattaaggtgggctaatttaactt 19703452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 35287755 - 35287823
Alignment:
Q  142 ttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    |||||||||||||||||||||| | | | ||||||||||| || ||||||||||| |||| ||| ||||    
T  35287755 ttggagtgtgctcctcctcaaggtatcatgttcgattctctccggtgccaatttgggtggactagttta 35287823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 40872918 - 40872990
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||| ||||| ||| | |||| |||||| || ||||||||||  |||||||| |||||||||||    
T  40872918 gagtgtgctcctcttcaaggttttaggttccattctctccggtgccaatttaggtgggctagtttaacttctt 40872990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 968403 - 968476
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| || | | | ||||||||||| ||  |||||||||  ||||||||||||| ||||||    
T  968403 ggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaatttaggtgggctaatttagcttctt 968476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 11492108 - 11492035
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||| ||| || | | | |||||||||||  ||||| ||||||| ||||||||||||| ||||||    
T  11492108 ggagtgtgctccttctcgaggtcttaggttcgattctcttcagtgtcaatttgggtgggctaatttagcttctt 11492035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 16852381 - 16852454
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| || | | | ||||||||||||  |||||||||||  |||||||| |||| ||||||    
T  16852381 ggagtgtgctcctcctcgaggtctcaggttcgattctccttagtgccaatttaggtgggctattttagcttctt 16852454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 28787529 - 28787480
Alignment:
Q  146 agtgtgctcctcctcaagatttgaagttcgattctccccagtgccaattt 195  Q
    |||||||||||||||||| | | | ||| |||||||||||||||||||||    
T  28787529 agtgtgctcctcctcaaggtctcaggtttgattctccccagtgccaattt 28787480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 44780149 - 44780076
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| | | | ||| ||||| | | |||| ||||||| ||||||||||||| ||||||    
T  44780149 ggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttgggtgggctaatttagcttctt 44780076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 26688903 - 26688979
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||||||||| | | | ||||  |||| || |||| ||||||| |||||||| |||| ||||||    
T  26688903 cttggagtgtgctcctcctcaaggtctcaggttcagttcttcctagtgtcaatttgggtgggctagtttagcttctt 26688979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 27979195 - 27979271
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||| || ||||||||||  | | |||||||||| || | |||| |||||||  |||||||||||||||||||    
T  27979195 cttggagtttgttcctcctcaaagtcttaagttcgattatctctagtgtcaatttggatgggctaatttaacttctt 27979271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 28036464 - 28036540
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||| || ||||||||||  | | |||||||||| || | |||| |||||||  |||||||||||||||||||    
T  28036464 cttggagtttgttcctcctcaaagtcttaagttcgattatctctagtgtcaatttggatgggctaatttaacttctt 28036540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 31408156 - 31408084
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||||| ||| | ||||||||||| | | || |||||| || ||| ||||||| ||||||    
T  31408156 gagtgtgctcctcctcaaggtttcaggttcgattctctctaatgtcaatttaagggggttaatttagcttctt 31408084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 37085584 - 37085511
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||| ||||| || ||| | ||||||||||||||| | ||||||| |||||||||||||||||||||    
T  37085584 ggagtgtgctcatcctcgaggtttcaggttcgattctccccaataccaatttaagtgggctaatttaacttctt 37085511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 22760904 - 22760967
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaat 207  Q
    |||||||||||||||||||| | | | ||||||||||||||  |||||||||||||||||||||    
T  22760904 ggagtgtgctcctcctcaaggtctcaggttcgattctccccgatgccaatttgagtgggctaat 22760967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 2446349 - 2446422
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| |||| | ||||||||||||| || ||||| ||||  ||||||||||||| ||||||    
T  2446349 ggagtgtgctcctcctcgagatctcaagttcgattctctccggtgccgatttaggtgggctaatttagcttctt 2446422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 11720967 - 11720922
Alignment:
Q  172 ttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  11720967 ttcgattctccccagtgccaatttgggtgggctaatttagcttctt 11720922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 21877849 - 21877922
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||| ||||||||||| ||| | | | |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  21877849 ggagggtgctcctccttaaggtctcacgttcgattctccacggtgccaaattgagtgggctaatttaacttctt 21877922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 18056810 - 18056744
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    |||||||||||||||| ||| | | | |||||||||||||| |||| |||||| |||||||||||||    
T  18056810 ggagtgtgctcctcctgaaggtctcaggttcgattctccccggtgctaatttgggtgggctaattta 18056744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 38374633 - 38374563
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttc 215  Q
    ||||||||||||||||||| | | | |||||||||||||| ||||||||||  |||||||| |||| ||||    
T  38374633 gagtgtgctcctcctcaaggtcttaggttcgattctccccggtgccaatttaggtgggctagtttagcttc 38374563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 42711999 - 42712065
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    |||||||||||||||||||| | | | ||||||||||||| |||| ||||||  |||||||||||||    
T  42711999 ggagtgtgctcctcctcaaggtctcatgttcgattctccctagtgtcaatttaggtgggctaattta 42712065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 7309397 - 7309469
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| || | | ||||||||||||| || ||| |||||| |||||||||||||| ||||||    
T  7309397 ggagtgtgctcctcctcgaggtctcaagttcgattctctcc-gtgtcaatttaagtgggctaatttagcttctt 7309469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 16355831 - 16355758
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||| ||||| ||  |||  ||||||||| |||||| || |||||||| |||||||||||||||||||    
T  16355831 ggagtgtgctactccttaaagtttcgagttcgattttccccaatgtcaatttgattgggctaatttaacttctt 16355758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 43590948 - 43591021
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||  | | | ||||||||||||| ||||||||||   ||||||||||||| ||||||    
T  43590948 ggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtgggctaatttagcttctt 43591021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 5579272 - 5579204
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattt 209  Q
    ||||||||||||||||||||||| | | | ||| || ||||||| ||||||||||| ||||| ||||||    
T  5579272 cttggagtgtgctcctcctcaaggtctcaggtttgactctccccggtgccaatttgggtgggataattt 5579204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 17041045 - 17040974
Alignment:
Q  146 agtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||| | | | ||||||||||| | |||||||||||| |||||  |||||| ||||||    
T  17041045 agtgtgctcctcctcaaggtctcaggttcgattctctcaagtgccaatttgggtgggtcaatttagcttctt 17040974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 30217922 - 30217993
Alignment:
Q  146 agtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||| | | |||||||||||||  ||||| |||| | |||||||||||| | ||||||    
T  30217922 agtgtgctcctcctcaaggtctcaagttcgattctcttcagtgtcaatataagtgggctaattaagcttctt 30217993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 5830638 - 5830572
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    ||||||| |||||||||||||||| |||||||||| || | |||| ||||||  |||| ||||||||    
T  5830638 ggagtgtactcctcctcaagatttcaagttcgattatctctagtgtcaatttaggtggactaattta 5830572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 45229033 - 45228987
Alignment:
Q  171 gttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||| |||||| |||||| |||||||||||||| ||||||    
T  45229033 gttcgattctctccagtgtcaatttaagtgggctaatttagcttctt 45228987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 279989 - 279916
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||| |||||||| ||| | | | |||| |||||| || ||||||||||| ||||||||||||| ||||||    
T  279989 ggagtgtactcctccttaaggtctcaggttcaattctctccggtgccaatttgggtgggctaatttagcttctt 279916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 11700207 - 11700271
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    |||| |||||||||||||| | | | ||||||||||| |  |||||||||||||||||||||||||    
T  11700207 gagtttgctcctcctcaaggtctcaggttcgattctctct-gtgccaatttgagtgggctaattta 11700271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 19553494 - 19553567
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| | | | |||| ||||||||| || |||||||  |||||||| |||| ||||||    
T  19553494 ggagtgtgctcctcctcaaggtcttaggttcaattctccccggttccaatttaggtgggctactttagcttctt 19553567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 20335866 - 20335793
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| || | | | ||||||||||| ||  || |||||||  |||||||||||||||||||    
T  20335866 ggagtgtgctcctcctcgaggtctcaggttcgattctcaccgatgtcaatttggatgggctaatttaacttctt 20335793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 23301637 - 23301564
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||  || | | ||||| |||||||   ||||| ||||||||||| |||||||||||||||    
T  23301637 ggagtgtgctcctccttgaggtctcaagtttgattctctttagtgctaatttgagtggactaatttaacttctt 23301564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 33181245 - 33181172
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||  |||||||| | | ||||||||| | | |||| ||||||| ||||||||||||| ||||||    
T  33181245 ggagtgtgctccaactcaagatctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 33181172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 33440793 - 33440744
Alignment:
Q  142 ttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgcca 191  Q
    ||||||| |||||||||| ||||||| | ||||||||||||||| |||||    
T  33440793 ttggagtttgctcctcctaaagatttcatgttcgattctccccattgcca 33440744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 5273624 - 5273552
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||||| | | | ||| |||| || || ||||||||||| |||||||| |||| ||||||    
T  5273624 gagtgtgctcctcctcaaggtcttaggtttgattgtctccggtgccaatttgggtgggctagtttagcttctt 5273552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 31835230 - 31835306
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||||||||| | | | |||||||| ||||  ||||||||||  | |||||| |||| ||||||    
T  31835230 cttggagtgtgctcctcctcaaggtctcaggttcgattatccctggtgccaattttggcgggctagtttagcttctt 31835306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 41975953 - 41976001
Alignment:
Q  169 aagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||| | |||| |||||| |||||||||||||| ||||||    
T  41975953 aagttcgattctctctagtgtcaatttaagtgggctaatttagcttctt 41976001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 45559257 - 45559305
Alignment:
Q  169 aagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||| ||||||||||  ||||| |||||| |||||||    
T  45559257 aagttcgattctccccggtgccaattttggtgggttaatttgacttctt 45559305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 12188338 - 12188265
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| ||| ||||||||||||| | |||||||||||||| ||| || |||| ||||||    
T  12188338 ggagtgtgctcctcctcaaggtttcaagttcgattctctctagtgccaatttgagggggttagtttagcttctt 12188265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 24641225 - 24641152
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| || ||| | |||||||||||| || |||||||||  ||||||||||||||||||||    
T  24641225 ggagtgtgctcctcctcgaggtttaaggttcgattctcctcactgccaatttaggtgggctaatttaacttctt 24641152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 8597774 - 8597709
Alignment:
Q  152 ctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||| | | |||||| |||||| |||||||||||||| ||||||||||||| ||||||    
T  8597774 ctcctcctcaaggtctcaagttcaattctctccagtgccaatttgggtgggctaatttagcttctt 8597709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 13441102 - 13441171
Alignment:
Q  148 tgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||| | || | | |||||||||||| | |||||||||||| |||||||||||||||||||||    
T  13441102 tgtgctcctccacgaggtctcaagttcgattcttctcagtgccaatttaagtgggctaatttaacttctt 13441171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 2484788 - 2484834
Alignment:
Q  171 gttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||| || ||| ||||||||||||||||||||||||||||    
T  2484788 gttcgattctctccggtgtcaatttgagtgggctaatttaacttctt 2484834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 18263908 - 18263954
Alignment:
Q  171 gttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||    
T  18263908 gttcgattctccccagtgccaatttaggtgggctaatttagcttctt 18263954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 18562673 - 18562600
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||  |||||| | ||| ||||||||| ||| |||||||  ||||||||||||| ||||||    
T  18562673 ggagtgtgctcctccttgagatttcaggtttgattctcccaagtaccaatttaggtgggctaatttagcttctt 18562600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 21418511 - 21418584
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| |  | | ||||||||||||||| ||||||||||   ||||||||||||| ||||||    
T  21418511 ggagtgtgctcctcctccatgtctcaagttcgattctccctagtgccaattaaggtgggctaatttagcttctt 21418584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 9539717 - 9539763
Alignment:
Q  171 gttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||    
T  9539717 gttcgattctccccaatgccaatttgagttagctaatttatcttctt 9539763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 10338209 - 10338143
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    |||||||||||||||||||| | | | ||||||||| |||||||| ||| |||| || |||||||||    
T  10338209 ggagtgtgctcctcctcaaggtctcaggttcgattccccccagtgtcaacttgattgagctaattta 10338143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 6385907 - 6385976
Alignment:
Q  148 tgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||| ||| | | | ||||||||||| || |||| |||||| ||||||||||||| ||||||    
T  6385907 tgtgctcctccttaaggtctcaggttcgattctctccggtgctaatttgggtgggctaatttagcttctt 6385976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 12633050 - 12633123
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||| || |||| | | ||||||||||| ||| || |||||| ||||| |||||||| ||||||    
T  12633050 ggagtgtgctcctcttcgagatctcatgttcgattctctccaatgtcaatttaagtggactaatttagcttctt 12633123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 20213082 - 20213155
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||  | | | ||||||||| | | |||| ||||||| ||||||||||||| ||||||    
T  20213082 ggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 20213155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 22107105 - 22107178
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||  | | | ||||||||| | | |||| ||||||| ||||||||||||| ||||||    
T  22107105 ggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 22107178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 34444845 - 34444917
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||| |||| | | | |||||||||||||  | || | |||||||||||||||||| ||||||    
T  34444845 gagtgtgctcctccccaaggtctcaggttcgattctccctggagctagtttgagtgggctaatttagcttctt 34444917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 15814 - 15739
Alignment:
Q  142 ttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||| |||||||||||||| | | ||||| |||||||| | ||||||||||| ||||||||||||| ||||||    
T  15814 ttggagtatgctcctcctcaaggtctcaagtttgattctccgcggtgccaatttgggtgggctaatttagcttctt 15739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 8075162 - 8075089
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| ||| | ||||||||| | | |||| ||||||| ||||||||||||| ||||||    
T  8075162 ggagtgtgctcctcctcaaggtttcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 8075089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 19716237 - 19716309
Alignment:
Q  143 tggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttc 215  Q
    ||||||||||||||||||||| | |   |||||||||||||| ||| ||||||| ||||||||||||| ||||    
T  19716237 tggagtgtgctcctcctcaaggtctctggttcgattctccccggtgacaatttgggtgggctaatttagcttc 19716309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 20501738 - 20501809
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||| ||| | | | ||||||||||| |||||||||||||||| ||||||||||| ||||||    
T  20501738 gagtgtgctcctccttaaggtctcaggttcgattctctccagtgccaatttgag-gggctaatttagcttctt 20501809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 45699962 - 45699890
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||| ||  |||||  |||||||||| |  |||||||||| |||||||||||||||||||||    
T  45699962 gagtgtgctcctccttaaagtttgagattcgattctctcgtgtgccaatttaagtgggctaatttaacttctt 45699890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 216
Target Start/End: Original strand, 29228853 - 29228924
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttct 216  Q
    |||||||||||||||||   | | ||||||||| ||| ||||||||||||| |||||||||||||| |||||    
T  29228853 gagtgtgctcctcctcaccttctcaagttcgatactctccagtgccaattttagtgggctaatttagcttct 29228924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 47237006 - 47236935
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttc 215  Q
    |||||||||||||| ||||| | | | |||||||||||||| ||||||||||| ||||||| ||||| ||||    
T  47237006 ggagtgtgctcctcttcaaggtctcatgttcgattctccccggtgccaatttgggtgggcttatttagcttc 47236935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 31520640 - 31520574
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaattta 210  Q
    ||||||||||||||||| || | | | ||| ||||||| |||||| |||||||||||||||||||||    
T  31520640 ggagtgtgctcctcctcgaggtcttaggtttgattctctccagtgtcaatttgagtgggctaattta 31520574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 4844546 - 4844473
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| || | | | | ||||||||| || ||||||||||| ||||||||||||| ||||||    
T  4844546 ggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatttagcttctt 4844473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 4870242 - 4870169
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| || | | | | ||||||||| || ||||||||||| ||||||||||||| ||||||    
T  4870242 ggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatttagcttctt 4870169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 10445174 - 10445101
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| || | | | ||||||||||| |  |||| |||||||||||||||||||| ||||||    
T  10445174 ggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgctaatttgagtgggctaatttagcttctt 10445101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 14339651 - 14339724
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||  | | | ||||||||||||| ||||||||||   ||||||||||||| ||||||    
T  14339651 ggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtgggctaatttagcttctt 14339724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 25035750 - 25035819
Alignment:
Q  148 tgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||| |||||| | ||||||||||| || ||| ||||||| ||||| ||||||| ||||||    
T  25035750 tgtgctcctcctcgagatttcaggttcgattctcaccggtgtcaatttgggtgggttaatttaccttctt 25035819  T

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Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 26871542 - 26871469
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaactt 214  Q
    |||||||| | |||||||||||  | ||| ||| |||||| |||| |||||||||| |||||||||||||||||    
T  26871542 cttggagttttctcctcctcaaagtctgaggtttgattctacccaatgccaatttgggtgggctaatttaactt 26871469  T

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Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 37788500 - 37788428
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| | | | ||||||||||| | |||||||||||||| ||| ||||||| ||||||    
T  37788500 ggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgag-gggttaatttagcttctt 37788428  T

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Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 44743890 - 44743817
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||| || | | | |||||||| || |||||||||||||| ||||| ||||||| ||||||    
T  44743890 ggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaatttgggtgggttaatttagcttctt 44743817  T

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Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 51903913 - 51903840
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||  | | | | ||||||||||| || ||| ||||||||||||||||||||| ||||||    
T  51903913 ggagtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaatttgagtgggctaatttagcttctt 51903840  T

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Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 47454655 - 47454579
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||| || | | | ||||||||||||||| |||||||||  ||||| || |||| ||||||    
T  47454655 cttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggttagtttagcttctt 47454579  T

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Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 216
Target Start/End: Original strand, 26411587 - 26411658
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttct 216  Q
    |||||||||||| |||||  ||| |||||||||||| | | |||||||||||  |||||||||||| |||||    
T  26411587 gagtgtgctccttctcaatgtttcaagttcgattcttctcggtgccaatttggatgggctaatttagcttct 26411658  T

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Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 21029671 - 21029609
Alignment:
Q  155 ctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||| ||||||||||||||||| | | ||||||| || |||| |||| ||||||    
T  21029671 ctcctcaagattttaagttcgattctccccaatactaatttgaatgagctagtttagcttctt 21029609  T

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Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 331
Target Start/End: Original strand, 24434249 - 24434310
Alignment:
Q  272 attccatgcatttagaaaatca--catttacatacatgaattaatcttggccatcgacttga 331  Q
    ||||||||||||||||||||||  ||||||||||| | |||| || ||||||||||| ||||    
T  24434249 attccatgcatttagaaaatcaggcatttacatacgttaatttattttggccatcgatttga 24434310  T

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Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 30715783 - 30715855
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||  ||| | ||||||||||| || |||||||||||  ||||||| |||| ||||||    
T  30715783 ggagtgtgctcctcctcaatgtttcaggttcgattctctcc-gtgccaatttggatgggctagtttagcttctt 30715855  T

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Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 40063661 - 40063714
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgag 198  Q
    |||| |||||||||| ||| | | ||||||||||||| ||||||||||||||||    
T  40063661 gagtatgctcctccttaaggtctcaagttcgattctctccagtgccaatttgag 40063714  T

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Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 17765168 - 17765220
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttg 196  Q
    |||||||||||||||||||||| | | ||||||||| ||| | ||||||||||    
T  17765168 ggagtgtgctcctcctcaagatctcaggttcgattcacccaattgccaatttg 17765220  T

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Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 19066488 - 19066540
Alignment:
Q  144 ggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttg 196  Q
    |||||||||||||||||||||| | | ||||||||| ||| | ||||||||||    
T  19066488 ggagtgtgctcctcctcaagatctcaggttcgattcacccaattgccaatttg 19066540  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 44069796 - 44069872
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||||||||||||| | | | ||| ||||||  || ||||||||||  |||||||| |||| ||||||    
T  44069796 cttggagtgtgctcctcctcaaggtctcaggtttgattctttccggtgccaatttaggtgggctagtttagcttctt 44069872  T

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Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 54990740 - 54990816
Alignment:
Q  141 cttggagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||| ||||||||||||||| | | | |||||||||||| |  || ||||||  ||||||||||||| ||||||    
T  54990740 cttggagcgtgctcctcctcaaggtctcaggttcgattctcctcgatggcaatttaggtgggctaatttagcttctt 54990816  T

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Target: scaffold0211 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 217
Target Start/End: Original strand, 24137 - 24167
Alignment:
Q  187 tgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||||||||||||||||||    
T  24137 tgccaatttgagtgggctaatttaacttctt 24167  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 18344 - 18412
Alignment:
Q  148 tgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    |||||||||||||||| ||| | ||| ||||||| |  |||||||||||||| |||||||||| ||||||    
T  18344 tgtgctcctcctcaaggtttcaggtttgattctctctggtgccaatttgagt-ggctaatttagcttctt 18412  T

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Target: scaffold0115 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 42690 - 42626
Alignment:
Q  153 tcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||| | |||||||||||||    ||| ||||||  ||||||||||||||||||||    
T  42690 tcctcctcaagatctcaagttcgattctctatggtgtcaatttaggtgggctaatttaacttctt 42626  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 49348 - 49420
Alignment:
Q  145 gagtgtgctcctcctcaagatttgaagttcgattctccccagtgccaatttgagtgggctaatttaacttctt 217  Q
    ||||||||||||| || || | | | ||||||||||| || ||| |||||| |||||| ||||||||||||||    
T  49348 gagtgtgctcctcttcgaggtatcaggttcgattctctccggtgtcaatttaagtgggttaatttaacttctt 49420  T

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