View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13005_low_15 (Length: 226)
Name: NF13005_low_15
Description: NF13005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13005_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 32858189 - 32858383
Alignment:
| Q |
11 |
atcatcaaatagagaattgaagataaagatcatgcttaagaaaggcatctggtgttaaattgtaatttcctatttgtattttgactgtatataaagttta |
110 |
Q |
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| T |
32858189 |
atcagcaaatagagaattgaagataaagatcatgcttaagaaaggcatctggtgttaaattgtaatttcctatttgtattttgactgtatataaagttta |
32858288 |
T |
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| Q |
111 |
atgctcacatcattagtcattcgtcttctactatatatatagatcagggatagtcaggtcctttctgctgattataaaacaagtgctgctttatgttac |
209 |
Q |
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| T |
32858289 |
atgctcacatcattagtcattcgtcttctac----tatatagatcagggatagtcaggtcctttctgctgattataaaacaagtgctgctttatgttac |
32858383 |
T |
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