View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13006_low_40 (Length: 332)

Name: NF13006_low_40
Description: NF13006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13006_low_40
NF13006_low_40
[»] chr4 (34 HSPs)
chr4 (18-322)||(27968065-27968369)
chr4 (255-303)||(19422365-19422413)
chr4 (257-303)||(23815317-23815363)
chr4 (266-315)||(51044545-51044594)
chr4 (266-315)||(55599101-55599150)
chr4 (255-299)||(10192235-10192279)
chr4 (255-303)||(30024647-30024695)
chr4 (255-299)||(41701516-41701560)
chr4 (255-299)||(42321954-42321998)
chr4 (255-299)||(43372044-43372088)
chr4 (255-299)||(50745951-50745995)
chr4 (255-299)||(54325112-54325156)
chr4 (255-303)||(54327524-54327572)
chr4 (258-298)||(55870419-55870459)
chr4 (256-299)||(24929444-24929487)
chr4 (267-301)||(11917508-11917542)
chr4 (257-299)||(20936079-20936121)
chr4 (266-296)||(30743319-30743349)
chr4 (266-316)||(35743238-35743288)
chr4 (260-293)||(3662305-3662338)
chr4 (266-299)||(27623586-27623619)
chr4 (274-303)||(33361412-33361441)
chr4 (267-299)||(4071833-4071865)
chr4 (256-299)||(4191690-4191734)
chr4 (259-303)||(9319274-9319318)
chr4 (271-303)||(13216295-13216327)
chr4 (260-315)||(15969838-15969894)
chr4 (259-315)||(20907108-20907164)
chr4 (267-303)||(27876243-27876279)
chr4 (255-299)||(30338667-30338711)
chr4 (255-299)||(32724070-32724114)
chr4 (267-315)||(41606121-41606169)
chr4 (267-303)||(49219086-49219122)
chr4 (260-300)||(52926178-52926218)
[»] chr1 (34 HSPs)
chr1 (255-315)||(4200164-4200224)
chr1 (255-315)||(15360829-15360889)
chr1 (255-311)||(4215311-4215367)
chr1 (267-311)||(36641814-36641858)
chr1 (256-303)||(14737781-14737828)
chr1 (255-301)||(42336611-42336657)
chr1 (257-303)||(49517017-49517063)
chr1 (256-301)||(7274015-7274060)
chr1 (229-303)||(46980182-46980252)
chr1 (255-311)||(5941522-5941578)
chr1 (255-299)||(17420154-17420198)
chr1 (255-299)||(21516324-21516368)
chr1 (255-303)||(44936665-44936713)
chr1 (255-311)||(45804216-45804272)
chr1 (255-314)||(48830151-48830210)
chr1 (256-298)||(6933037-6933079)
chr1 (273-303)||(9777830-9777860)
chr1 (257-299)||(17631178-17631220)
chr1 (257-303)||(49557088-49557134)
chr1 (255-296)||(4363707-4363748)
chr1 (229-299)||(30285842-30285908)
chr1 (255-303)||(1879102-1879150)
chr1 (267-315)||(6981427-6981475)
chr1 (271-299)||(15581067-15581095)
chr1 (255-303)||(19462841-19462888)
chr1 (255-299)||(23895287-23895331)
chr1 (255-303)||(29007791-29007839)
chr1 (255-299)||(33527222-33527266)
chr1 (255-311)||(35080145-35080201)
chr1 (271-299)||(36070201-36070229)
chr1 (255-299)||(45990133-45990177)
chr1 (255-299)||(45999363-45999407)
chr1 (271-299)||(46252773-46252801)
chr1 (255-299)||(52286629-52286673)
[»] chr3 (41 HSPs)
chr3 (255-299)||(20192681-20192725)
chr3 (255-315)||(38462216-38462276)
chr3 (255-299)||(49586991-49587035)
chr3 (255-309)||(31364842-31364896)
chr3 (255-297)||(33965566-33965608)
chr3 (266-315)||(24605102-24605151)
chr3 (266-303)||(54775075-54775112)
chr3 (255-303)||(10101551-10101599)
chr3 (255-303)||(10212476-10212524)
chr3 (255-299)||(22232777-22232821)
chr3 (255-291)||(26599137-26599173)
chr3 (256-292)||(40122828-40122864)
chr3 (255-303)||(43397774-43397822)
chr3 (267-303)||(48397593-48397629)
chr3 (258-298)||(52450130-52450170)
chr3 (271-302)||(2152284-2152315)
chr3 (267-314)||(2175936-2175983)
chr3 (268-299)||(49546575-49546606)
chr3 (255-302)||(53736188-53736235)
chr3 (273-311)||(16790181-16790219)
chr3 (252-302)||(26330388-26330438)
chr3 (257-303)||(48364956-48365002)
chr3 (260-297)||(1816536-1816573)
chr3 (267-296)||(23793542-23793571)
chr3 (266-303)||(24235769-24235806)
chr3 (262-299)||(25964393-25964430)
chr3 (270-315)||(37788796-37788840)
chr3 (267-299)||(1395622-1395654)
chr3 (255-299)||(15304422-15304466)
chr3 (266-298)||(20267107-20267139)
chr3 (267-303)||(23952193-23952229)
chr3 (255-299)||(24887358-24887402)
chr3 (267-299)||(26990685-26990717)
chr3 (274-314)||(30669064-30669104)
chr3 (255-303)||(32663589-32663636)
chr3 (255-299)||(34954034-34954078)
chr3 (255-299)||(42038940-42038984)
chr3 (255-299)||(43116503-43116547)
chr3 (271-299)||(49465754-49465782)
chr3 (271-315)||(51455869-51455912)
chr3 (256-292)||(53457335-53457371)
[»] chr2 (35 HSPs)
chr2 (255-303)||(3458604-3458652)
chr2 (266-314)||(5998788-5998836)
chr2 (255-311)||(17952776-17952832)
chr2 (255-299)||(18962113-18962157)
chr2 (255-311)||(28803581-28803637)
chr2 (255-311)||(33192132-33192188)
chr2 (268-315)||(5045245-5045292)
chr2 (256-311)||(32098384-32098439)
chr2 (255-309)||(1939407-1939461)
chr2 (266-311)||(9878768-9878813)
chr2 (265-298)||(26167698-26167731)
chr2 (267-315)||(3423855-3423903)
chr2 (255-303)||(10143119-10143167)
chr2 (255-303)||(14666495-14666543)
chr2 (275-311)||(29628837-29628873)
chr2 (255-315)||(30537602-30537662)
chr2 (267-311)||(31461377-31461421)
chr2 (256-315)||(7282953-7283012)
chr2 (267-297)||(6546931-6546961)
chr2 (255-293)||(33256697-33256735)
chr2 (255-292)||(14209235-14209272)
chr2 (258-299)||(29729876-29729917)
chr2 (255-304)||(31740034-31740083)
chr2 (258-311)||(32615370-32615423)
chr2 (210-287)||(36863658-36863732)
chr2 (267-300)||(43199193-43199226)
chr2 (267-303)||(6988062-6988098)
chr2 (255-303)||(13630356-13630404)
chr2 (261-301)||(33576675-33576715)
chr2 (255-299)||(34054976-34055020)
chr2 (267-303)||(34339853-34339889)
chr2 (255-299)||(37053545-37053589)
chr2 (267-315)||(38239638-38239686)
chr2 (255-299)||(40837503-40837547)
chr2 (249-301)||(42817445-42817497)
[»] chr8 (31 HSPs)
chr8 (266-315)||(38561661-38561710)
chr8 (267-311)||(41620378-41620422)
chr8 (256-311)||(34563189-34563244)
chr8 (260-303)||(40728498-40728541)
chr8 (271-325)||(1892302-1892356)
chr8 (266-303)||(26820146-26820183)
chr8 (271-315)||(1664318-1664362)
chr8 (259-315)||(6918258-6918314)
chr8 (267-303)||(29699201-29699237)
chr8 (266-301)||(8799354-8799389)
chr8 (273-315)||(3945209-3945251)
chr8 (255-297)||(6950275-6950317)
chr8 (260-298)||(10437837-10437875)
chr8 (255-301)||(11494102-11494148)
chr8 (256-310)||(40280281-40280335)
chr8 (255-297)||(42237497-42237539)
chr8 (266-299)||(11119085-11119118)
chr8 (254-303)||(12224973-12225022)
chr8 (260-293)||(20672729-20672762)
chr8 (266-299)||(31315539-31315572)
chr8 (258-291)||(35298556-35298589)
chr8 (266-299)||(39392747-39392780)
chr8 (271-315)||(1666980-1667024)
chr8 (267-299)||(2364560-2364592)
chr8 (255-315)||(2699241-2699301)
chr8 (267-299)||(11569546-11569578)
chr8 (255-311)||(12361131-12361187)
chr8 (267-299)||(14482153-14482185)
chr8 (267-299)||(26370939-26370971)
chr8 (255-299)||(27728096-27728140)
chr8 (255-299)||(34788502-34788546)
[»] chr7 (38 HSPs)
chr7 (255-299)||(7243595-7243639)
chr7 (255-303)||(39591542-39591590)
chr7 (255-306)||(1373615-1373666)
chr7 (260-315)||(5939019-5939074)
chr7 (255-293)||(5006584-5006622)
chr7 (258-299)||(5276175-5276216)
chr7 (255-296)||(17989098-17989139)
chr7 (255-299)||(1417215-1417259)
chr7 (259-315)||(5715117-5715173)
chr7 (267-311)||(42656454-42656498)
chr7 (260-299)||(2999142-2999181)
chr7 (256-311)||(3241380-3241435)
chr7 (268-315)||(30133984-30134031)
chr7 (256-295)||(44239056-44239095)
chr7 (267-313)||(8680929-8680975)
chr7 (255-293)||(9527165-9527203)
chr7 (255-293)||(45777246-45777284)
chr7 (253-315)||(47004022-47004084)
chr7 (266-303)||(6630547-6630584)
chr7 (270-303)||(7623085-7623118)
chr7 (266-299)||(31341145-31341178)
chr7 (266-315)||(35808990-35809039)
chr7 (255-299)||(2727435-2727479)
chr7 (255-311)||(4966095-4966151)
chr7 (267-299)||(7100706-7100738)
chr7 (267-299)||(8445237-8445269)
chr7 (255-311)||(11208388-11208444)
chr7 (255-299)||(12835012-12835056)
chr7 (271-311)||(21853207-21853247)
chr7 (255-303)||(23918904-23918952)
chr7 (267-311)||(24973883-24973927)
chr7 (255-295)||(29363473-29363513)
chr7 (256-288)||(30160966-30160998)
chr7 (255-299)||(30456525-30456569)
chr7 (255-299)||(33894574-33894617)
chr7 (255-299)||(35536058-35536102)
chr7 (255-291)||(45593794-45593830)
chr7 (267-303)||(46281218-46281254)
[»] chr6 (27 HSPs)
chr6 (255-299)||(2027481-2027525)
chr6 (266-303)||(5328921-5328958)
chr6 (267-312)||(24836286-24836331)
chr6 (271-303)||(2206537-2206569)
chr6 (251-299)||(13360686-13360734)
chr6 (267-303)||(28531628-28531664)
chr6 (255-294)||(3181143-3181182)
chr6 (261-308)||(27857317-27857364)
chr6 (252-306)||(26491618-26491672)
chr6 (257-303)||(30004850-30004896)
chr6 (261-315)||(32975913-32975967)
chr6 (251-288)||(1497943-1497980)
chr6 (255-292)||(7713983-7714020)
chr6 (229-299)||(28660813-28660879)
chr6 (258-299)||(29957988-29958029)
chr6 (266-299)||(30865433-30865466)
chr6 (258-303)||(33068639-33068684)
chr6 (255-299)||(1402947-1402991)
chr6 (255-299)||(3171506-3171550)
chr6 (267-311)||(4248897-4248941)
chr6 (261-293)||(4420574-4420606)
chr6 (267-299)||(5551413-5551445)
chr6 (271-303)||(6016466-6016498)
chr6 (255-303)||(7785817-7785865)
chr6 (255-287)||(10154184-10154216)
chr6 (255-299)||(22742317-22742361)
chr6 (255-299)||(29274304-29274348)
[»] chr5 (22 HSPs)
chr5 (255-299)||(14295457-14295501)
chr5 (255-299)||(28586841-28586885)
chr5 (255-315)||(35135737-35135797)
chr5 (267-309)||(11615449-11615491)
chr5 (259-301)||(29117009-29117051)
chr5 (255-296)||(583848-583889)
chr5 (255-299)||(37063149-37063193)
chr5 (255-299)||(42181167-42181211)
chr5 (258-301)||(985582-985625)
chr5 (256-299)||(7096203-7096246)
chr5 (255-306)||(37526274-37526325)
chr5 (255-306)||(37690712-37690763)
chr5 (257-299)||(10303752-10303794)
chr5 (255-305)||(37588435-37588485)
chr5 (266-300)||(39823207-39823241)
chr5 (259-299)||(1019523-1019563)
chr5 (255-299)||(20982210-20982254)
chr5 (267-303)||(32969204-32969240)
chr5 (267-299)||(35095870-35095902)
chr5 (256-300)||(36639472-36639516)
chr5 (259-299)||(36646191-36646231)
chr5 (255-291)||(39750102-39750138)
[»] scaffold0508 (1 HSPs)
scaffold0508 (255-303)||(9850-9898)
[»] scaffold0199 (1 HSPs)
scaffold0199 (271-315)||(6759-6803)
[»] scaffold0103 (1 HSPs)
scaffold0103 (255-303)||(51515-51563)
[»] scaffold0053 (1 HSPs)
scaffold0053 (255-299)||(20130-20174)
[»] scaffold0024 (1 HSPs)
scaffold0024 (255-303)||(27523-27571)
[»] scaffold0590 (1 HSPs)
scaffold0590 (266-299)||(1160-1193)
[»] scaffold0275 (1 HSPs)
scaffold0275 (266-299)||(2782-2815)
[»] scaffold0060 (1 HSPs)
scaffold0060 (267-299)||(63372-63404)
[»] scaffold0049 (1 HSPs)
scaffold0049 (267-303)||(58180-58216)


Alignment Details
Target: chr4 (Bit Score: 285; Significance: 1e-160; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 18 - 322
Target Start/End: Complemental strand, 27968369 - 27968065
Alignment:
Q  18 acaatcagcaggacattcagcttatacttatcctattattgactacgagcaaacaaaactcaattccaacggtgcaagtaattactgatgcaacttgttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27968369 acaatcagcaggacattcagcttatacttatcctattattgactacgagcaaacaaaactcaattccaacggtgcaagtaattactgatgcaacttgttt 27968270  T
Q  118 taacagtgaaacctataacatttgtgtgaaacctcacttgagtacttacacacacttgtgagattgttcaaaagaatggtagaaacaacttgcataaact 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  27968269 taacagtgaaacctataacatttgtgtgaaacctcacttgagtacttacacatacttgtgagattgttcgaaagaatggtagaaacaacttgcataaact 27968170  T
Q  218 ctccaagatggttatgaaaacaatgtataatttactcatatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataaacacac 317  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27968169 ctccaagatggttatgaaaacaatgtataatttactcatacaaaaactgtttgactttattttatcatttgttataaaaataacttttatataaacacac 27968070  T
Q  318 ctatg 322  Q
    |||||    
T  27968069 ctatg 27968065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 19422413 - 19422365
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  19422413 atatgaaaaatgtttgactttattatatcttttgttatagaaataactt 19422365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 23815363 - 23815317
Alignment:
Q  257 atgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||| ||||||| |||||||||||||||||||| |||||||||    
T  23815363 atgaaaacagtttgacattattttatcttttgttatagaaataactt 23815317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 315
Target Start/End: Original strand, 51044545 - 51044594
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    |||||||||||||||||||||||||||| ||||| ||| || ||||||||    
T  51044545 gtttgactttattttatcttttgttatagaaatagcttatacataaacac 51044594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 315
Target Start/End: Complemental strand, 55599150 - 55599101
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||    
T  55599150 gtttgactttattttgtcttttgttacaaaagtaacttatatataaacac 55599101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 10192279 - 10192235
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||    
T  10192279 atatgaaaacaatttgactttattctatcttttgttataaaaata 10192235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 30024695 - 30024647
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||||  ||| ||||||||||||||||||||||| |||||||||    
T  30024695 atatgaaaacaattttactttattttatcttttgttatagaaataactt 30024647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 41701516 - 41701560
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||    
T  41701516 atatgaaaacgatttgactttattttatcttttgttatataaata 41701560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 42321954 - 42321998
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||  ||||||||||||||||| |||||||||||||||    
T  42321954 atatgaaaacaatttgactttattttatcatttgttataaaaata 42321998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 43372044 - 43372088
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||    
T  43372044 atataaaaacagtttgactgtattttatcttttgttataaaaata 43372088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 50745995 - 50745951
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||| ||||| |||||| |||||||||||||||||||||||||||    
T  50745995 atataaaaacagtttgattttattttatcttttgttataaaaata 50745951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 54325112 - 54325156
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||| |||||||||||||||||||||||| ||| |||||    
T  54325112 atatgaaaacagtttgactttattttatcttttgtaatagaaata 54325156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 54327524 - 54327572
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||||| |||||||||| ||||||||||||||||| ||| |||||    
T  54327524 atatgaaaacagtttgactttgttttatcttttgttatagaaacaactt 54327572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 55870419 - 55870459
Alignment:
Q  258 tgaaaactgtttgactttattttatcttttgttataaaaat 298  Q
    ||||||| |||||||||||||| ||||||||||||||||||    
T  55870419 tgaaaacagtttgactttatttgatcttttgttataaaaat 55870459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 299
Target Start/End: Complemental strand, 24929487 - 24929444
Alignment:
Q  256 tatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||    
T  24929487 tatgaaaacagttagactttattttatcttttgttatagaaata 24929444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 301
Target Start/End: Complemental strand, 11917542 - 11917508
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataac 301  Q
    ||||||||||||||||||||||||| |||||||||    
T  11917542 tttgactttattttatcttttgttacaaaaataac 11917508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 20936079 - 20936121
Alignment:
Q  257 atgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||  |||||||||||||||||||||||||||| |||||    
T  20936079 atgaaaatagtttgactttattttatcttttgttatagaaata 20936121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 296
Target Start/End: Complemental strand, 30743349 - 30743319
Alignment:
Q  266 gtttgactttattttatcttttgttataaaa 296  Q
    |||||||||||||||||||||||||||||||    
T  30743349 gtttgactttattttatcttttgttataaaa 30743319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 35743288 - 35743238
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaataacttttatataaacaca 316  Q
    ||||| |||||||||||||||||||||| ||||||||| || || ||||||    
T  35743288 gtttgcctttattttatcttttgttatagaaataacttgtacatcaacaca 35743238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 293
Target Start/End: Complemental strand, 3662338 - 3662305
Alignment:
Q  260 aaaactgtttgactttattttatcttttgttata 293  Q
    ||||| ||||||||||||||||||||||||||||    
T  3662338 aaaacagtttgactttattttatcttttgttata 3662305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 299
Target Start/End: Complemental strand, 27623619 - 27623586
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||||||||||||||||||||| |||||    
T  27623619 gtttgactttattttatcttttgttatacaaata 27623586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 303
Target Start/End: Complemental strand, 33361441 - 33361412
Alignment:
Q  274 ttattttatcttttgttataaaaataactt 303  Q
    ||||||||||||||||||||||||||||||    
T  33361441 ttattttatcttttgttataaaaataactt 33361412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 299
Target Start/End: Complemental strand, 4071865 - 4071833
Alignment:
Q  267 tttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||||||||||||||||||| |||||    
T  4071865 tttgactttattttatcttttgttatagaaata 4071833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 299
Target Start/End: Complemental strand, 4191734 - 4191690
Alignment:
Q  256 tatgaaaactgtttgacttta-ttttatcttttgttataaaaata 299  Q
    ||||||||| ||||||||||| ||||||||||||||||| |||||    
T  4191734 tatgaaaacagtttgactttatttttatcttttgttatagaaata 4191690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 9319274 - 9319318
Alignment:
Q  259 gaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||| ||||||||||| |||||||||||||| |||| ||||    
T  9319274 gaaaactgattgactttattctatcttttgttatagaaattactt 9319318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 303
Target Start/End: Original strand, 13216295 - 13216327
Alignment:
Q  271 actttattttatcttttgttataaaaataactt 303  Q
    |||||||||||||||||| ||||||||||||||    
T  13216295 actttattttatcttttgctataaaaataactt 13216327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 15969894 - 15969838
Alignment:
Q  260 aaaactgtttgactttattttatcttttgtt-ataaaaataacttttatataaacac 315  Q
    ||||||| ||||||||| ||||||||| ||| ||||||||||||| || ||||||||    
T  15969894 aaaactgattgactttactttatctttcgtttataaaaataacttatacataaacac 15969838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 20907164 - 20907108
Alignment:
Q  259 gaaaactgtttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    |||||| |||| ||||||||||||||||| ||||| ||||| ||| || ||||||||    
T  20907164 gaaaacagtttcactttattttatcttttcttatacaaatagcttatacataaacac 20907108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 303
Target Start/End: Complemental strand, 27876279 - 27876243
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||||| |||||||||||| |||||||||||||    
T  27876279 tttgactttactttatcttttgtcataaaaataactt 27876243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 30338667 - 30338711
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||| |||| |||||||| |||||||||||||| |||||    
T  30338667 atatgaaaacagtttaactttattctatcttttgttatagaaata 30338711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 32724114 - 32724070
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||  |||||||||||||||||||||||| ||| |||||    
T  32724114 atatgaaaatagtttgactttattttatcttttgtaatagaaata 32724070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 41606169 - 41606121
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    ||||||||||||||||| |||||||| ||||||  ||||| ||||||||    
T  41606169 tttgactttattttatcctttgttatcaaaatagtttttacataaacac 41606121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 303
Target Start/End: Complemental strand, 49219122 - 49219086
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||||||||||| |||||||||| |||||||||    
T  49219122 tttgactttattttatattttgttatagaaataactt 49219086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 300
Target Start/End: Complemental strand, 52926218 - 52926178
Alignment:
Q  260 aaaactgtttgactttattttatcttttgttataaaaataa 300  Q
    ||||| |||||||| ||||||||||||||||||| ||||||    
T  52926218 aaaacagtttgactatattttatcttttgttatagaaataa 52926178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 4200224 - 4200164
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    ||||||||||   |||||||||||||||||||||||||||||||||||| |||||||||||    
T  4200224 atatgaaaacaacttgactttattttatcttttgttataaaaataacttatatataaacac 4200164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 15360889 - 15360829
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||  || ||||||||    
T  15360889 atatgaaaacagtttgactttattttatcttttgttatagaaataactaatacataaacac 15360829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 4215367 - 4215311
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    |||||||||| |||||||||||||||||| |||| ||| |||||||||| |||||||    
T  4215367 atatgaaaacagtttgactttattttatcatttgctatcaaaataacttatatataa 4215311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 36641858 - 36641814
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||    
T  36641858 tttgactttattttatcttttgttatagaaataacttatatataa 36641814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 14737781 - 14737828
Alignment:
Q  256 tatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||||  ||||||||||||||||||||||||||| |||||||||    
T  14737781 tatgaaaacaatttgactttattttatcttttgttatagaaataactt 14737828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 301
Target Start/End: Complemental strand, 42336657 - 42336611
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataac 301  Q
    ||||||||| || ||||||||||||||| ||||||||||||||||||    
T  42336657 atatgaaaattgcttgactttattttattttttgttataaaaataac 42336611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 49517063 - 49517017
Alignment:
Q  257 atgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||  ||||||||||||||||||||||||||| |||||||||    
T  49517063 atgaaaacaatttgactttattttatcttttgttatagaaataactt 49517017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 7274015 - 7274060
Alignment:
Q  256 tatgaaaactgtttgactttattttatcttttgttataaaaataac 301  Q
    |||||||||  ||||||||||||| |||||||||||||||||||||    
T  7274015 tatgaaaacaatttgactttatttcatcttttgttataaaaataac 7274060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 303
Target Start/End: Original strand, 46980182 - 46980252
Alignment:
Q  229 ttatgaaaacaatgtataatttactcatatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||||||| ||||| |||    ||||||||| ||||| ||||||||||||||||| |||||||| |||||    
T  46980182 ttatgaaaacaatttataactta----tatgaaaacagtttgtctttattttatcttttgatataaaaacaactt 46980252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 5941522 - 5941578
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    |||||||||| |||||||||||||||||| | |||||| |||||| ||| |||||||    
T  5941522 atatgaaaacagtttgactttattttatcatctgttatcaaaatagcttatatataa 5941578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 17420198 - 17420154
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||| |||| |||||||||||||||||| |||||||||||    
T  17420198 atatgaaaattgttcgactttattttatcttttcttataaaaata 17420154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 21516368 - 21516324
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||| |||||||| |||||||||||| |||||||||||    
T  21516368 atatgaaaactatttgacttcattttatcttttcttataaaaata 21516324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 44936665 - 44936713
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||||  |||||||||||| ||||||||||||||| |||||||||    
T  44936665 atatgaaaatagtttgactttatcttatcttttgttatagaaataactt 44936713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 45804272 - 45804216
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    |||||||||  |||||||||||||||||  ||| ||||| |||||||||||||||||    
T  45804272 atatgaaaatagtttgactttattttattatttattatagaaataacttttatataa 45804216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 48830151 - 48830210
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataaaca 314  Q
    |||||||||  ||||||||||||||||||||| || ||| ||||||||| || |||||||    
T  48830151 atatgaaaatagtttgactttattttatctttggtaatagaaataacttatacataaaca 48830210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 298
Target Start/End: Original strand, 6933037 - 6933079
Alignment:
Q  256 tatgaaaactgtttgactttattttatcttttgttataaaaat 298  Q
    |||||||||  |||||||||||||||| |||||||||||||||    
T  6933037 tatgaaaacaatttgactttattttatgttttgttataaaaat 6933079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 303
Target Start/End: Complemental strand, 9777860 - 9777830
Alignment:
Q  273 tttattttatcttttgttataaaaataactt 303  Q
    |||||||||||||||||||||||||||||||    
T  9777860 tttattttatcttttgttataaaaataactt 9777830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 17631178 - 17631220
Alignment:
Q  257 atgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||| ||| |||||||||||||||||||||||| |||||    
T  17631178 atgaaaacagttagactttattttatcttttgttatagaaata 17631220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 49557134 - 49557088
Alignment:
Q  257 atgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    ||||| ||| ||| ||||||||||||||||||||||| |||||||||    
T  49557134 atgaatactatttaactttattttatcttttgttatagaaataactt 49557088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 4363707 - 4363748
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaa 296  Q
    |||||||||| ||||||| |||||| ||||||||||||||||    
T  4363707 atatgaaaacagtttgacattatttaatcttttgttataaaa 4363748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 30285908 - 30285842
Alignment:
Q  229 ttatgaaaacaatgtataatttactcatatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||||| ||| ||||||    |||||||| || |||||||||||||| ||||||||||| |||||    
T  30285908 ttatgaaaacaaagtaaaattta----tatgaaaattgattgactttattttaacttttgttatagaaata 30285842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 1879102 - 1879150
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||||  ||||||||||||||||||| ||||||| |||| ||||    
T  1879102 atatgaaaacattttgactttattttatcttctgttatagaaatgactt 1879150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 6981475 - 6981427
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    ||||||||| |||||| |||||||||| |||||| || |||||||||||    
T  6981475 tttgactttgttttattttttgttatagaaataatttatatataaacac 6981427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 299
Target Start/End: Complemental strand, 15581095 - 15581067
Alignment:
Q  271 actttattttatcttttgttataaaaata 299  Q
    |||||||||||||||||||||||||||||    
T  15581095 actttattttatcttttgttataaaaata 15581067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 19462841 - 19462888
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||||||||||||||||| ||||| | |||||||| |||||||||    
T  19462841 atatgaaaactgtttgacttta-tttatatcttgttatagaaataactt 19462888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 23895331 - 23895287
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||| ||| |||||| ||||||||||||||||||||| |||||    
T  23895331 atatgagaacagtttgaatttattttatcttttgttatagaaata 23895287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 29007791 - 29007839
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||||  ||||||||||| ||| |||||||||||| |||||||||    
T  29007791 atatgaaaatagtttgactttaatttttcttttgttatagaaataactt 29007839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 33527222 - 33527266
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||| |||||||| |||||||||||||||| || |||||    
T  33527222 atatgaaaacagtttgactgtattttatcttttgttttagaaata 33527266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 35080145 - 35080201
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    ||||| |||| ||||||||||||||||| |||||||||| ||||  ||| |||||||    
T  35080145 atatggaaacagtttgactttattttattttttgttatagaaattgcttatatataa 35080201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 299
Target Start/End: Complemental strand, 36070229 - 36070201
Alignment:
Q  271 actttattttatcttttgttataaaaata 299  Q
    |||||||||||||||||||||||||||||    
T  36070229 actttattttatcttttgttataaaaata 36070201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 45990133 - 45990177
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||  ||| |||||||||||||||||| ||||||||||    
T  45990133 atatgaaaacaattttactttattttatcttttgatataaaaata 45990177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 45999363 - 45999407
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||| | |||||||||||| ||||||||||||||| |||||    
T  45999363 atatgaaagcagtttgactttatcttatcttttgttatagaaata 45999407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 299
Target Start/End: Original strand, 46252773 - 46252801
Alignment:
Q  271 actttattttatcttttgttataaaaata 299  Q
    |||||||||||||||||||||||||||||    
T  46252773 actttattttatcttttgttataaaaata 46252801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 52286673 - 52286629
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||| ||||| |||||||||||||||||||| || |||||    
T  52286673 atatgaaaattgtttaactttattttatcttttgttgtagaaata 52286629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 20192681 - 20192725
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  20192681 atatgaaaactgtttgactttattttatcttttgttatataaata 20192725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 38462276 - 38462216
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||| ||| || ||||||||    
T  38462276 atatgaaaacagtttgactttattttatcttttggtatagaaatagcttataaataaacac 38462216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 49586991 - 49587035
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||| |||||||||||||||||||||||||||| |||||    
T  49586991 atatgaaaacagtttgactttattttatcttttgttatagaaata 49587035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 309
Target Start/End: Complemental strand, 31364896 - 31364842
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatat 309  Q
    |||||||||||| || ||||||||||| ||||||||||||||||| ||| |||||    
T  31364896 atatgaaaactgcttaactttattttaccttttgttataaaaatagcttatatat 31364842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 297
Target Start/End: Original strand, 33965566 - 33965608
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaa 297  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  33965566 atatgaaaacagtttgactttattttaccttttgttataaaaa 33965608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 315
Target Start/End: Original strand, 24605102 - 24605151
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    |||||||||||||| ||||||||||||| ||||||||| || ||||||||    
T  24605102 gtttgactttatttcatcttttgttatagaaataacttatacataaacac 24605151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 303
Target Start/End: Complemental strand, 54775112 - 54775075
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||||||||||||||||||||||| |||||||||    
T  54775112 gtttgactttattttatcttttgttatagaaataactt 54775075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 10101551 - 10101599
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||||  ||| ||||||||||||||||||||||| |||||||||    
T  10101551 atatgaaaacaatttaactttattttatcttttgttatagaaataactt 10101599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 10212476 - 10212524
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||||  ||| ||||||||||||||||||||||| |||||||||    
T  10212476 atatgaaaacaatttaactttattttatcttttgttatagaaataactt 10212524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 22232821 - 22232777
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||| |||||||||||||||||| ||||||||| |||||    
T  22232821 atatgaaaacagtttgactttattttatcatttgttatataaata 22232777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 291
Target Start/End: Complemental strand, 26599173 - 26599137
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgtta 291  Q
    ||||||||||| |||||||||||||||||||||||||    
T  26599173 atatgaaaactatttgactttattttatcttttgtta 26599137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 40122828 - 40122864
Alignment:
Q  256 tatgaaaactgtttgactttattttatcttttgttat 292  Q
    ||||||||| |||||||||||||||||||||||||||    
T  40122828 tatgaaaacagtttgactttattttatcttttgttat 40122864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 43397822 - 43397774
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||||| ||||||||| |||||||| |||||| ||||||||||||    
T  43397822 atatgaaaacagtttgacttgattttatcgtttgttgtaaaaataactt 43397774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 303
Target Start/End: Complemental strand, 48397629 - 48397593
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||||||||||||||| |||||||||||||||    
T  48397629 tttgactttattttatcttttattataaaaataactt 48397593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 52450130 - 52450170
Alignment:
Q  258 tgaaaactgtttgactttattttatcttttgttataaaaat 298  Q
    |||||||||||||||||||||| ||||||||||||| ||||    
T  52450130 tgaaaactgtttgactttatttcatcttttgttatagaaat 52450170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 302
Target Start/End: Original strand, 2152284 - 2152315
Alignment:
Q  271 actttattttatcttttgttataaaaataact 302  Q
    ||||||||||||||||||||||||||||||||    
T  2152284 actttattttatcttttgttataaaaataact 2152315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 314
Target Start/End: Original strand, 2175936 - 2175983
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataacttttatataaaca 314  Q
    ||||||||||||||||||||  ||||||||||||||  ||||||||||    
T  2175936 tttgactttattttatctttccttataaaaataactagtatataaaca 2175983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 299
Target Start/End: Original strand, 49546575 - 49546606
Alignment:
Q  268 ttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||||||||||||||||||||||||    
T  49546575 ttgactttattttatcttttgttataaaaata 49546606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 53736188 - 53736235
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataact 302  Q
    |||||||||  ||||||| |||||||||||||||||||| ||||||||    
T  53736188 atatgaaaatagtttgacattattttatcttttgttatagaaataact 53736235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 311
Target Start/End: Original strand, 16790181 - 16790219
Alignment:
Q  273 tttattttatcttttgttataaaaataacttttatataa 311  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  16790181 tttattttatcttttgttatagaaataacttatatataa 16790219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 302
Target Start/End: Original strand, 26330388 - 26330438
Alignment:
Q  252 ctcatatgaaaactgtttgactttattttatcttttgttataaaaataact 302  Q
    ||||||||| |||  |||||||||||| | |||||||||||||||||||||    
T  26330388 ctcatatgataacaatttgactttattctgtcttttgttataaaaataact 26330438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 303
Target Start/End: Original strand, 48364956 - 48365002
Alignment:
Q  257 atgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||  ||||||||||||||||||||||||||  |||||||||    
T  48364956 atgaaaacaatttgactttattttatcttttgttatcgaaataactt 48365002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 297
Target Start/End: Complemental strand, 1816573 - 1816536
Alignment:
Q  260 aaaactgtttgactttattttatcttttgttataaaaa 297  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  1816573 aaaacagtttgactttattttatcttttattataaaaa 1816536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 296
Target Start/End: Complemental strand, 23793571 - 23793542
Alignment:
Q  267 tttgactttattttatcttttgttataaaa 296  Q
    ||||||||||||||||||||||||||||||    
T  23793571 tttgactttattttatcttttgttataaaa 23793542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 303
Target Start/End: Original strand, 24235769 - 24235806
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  24235769 gtttgactttatattatcttttgttatagaaataactt 24235806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 299
Target Start/End: Complemental strand, 25964430 - 25964393
Alignment:
Q  262 aactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||| | |||||||||||||||||||||||||||    
T  25964430 aactgtttcaatttattttatcttttgttataaaaata 25964393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 315
Target Start/End: Complemental strand, 37788840 - 37788796
Alignment:
Q  270 gactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    ||||||||||||||||||||||| |||||||||| || ||||||||    
T  37788840 gactttattttatcttttgttat-aaaataacttatacataaacac 37788796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 299
Target Start/End: Complemental strand, 1395654 - 1395622
Alignment:
Q  267 tttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||||||||||||||||||| |||||    
T  1395654 tttgactttattttatcttttgttatagaaata 1395622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 15304422 - 15304466
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||  ||| ||||||||||||||||||||||| |||||    
T  15304422 atatgaaaacaatttaactttattttatcttttgttatagaaata 15304466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 298
Target Start/End: Complemental strand, 20267139 - 20267107
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaat 298  Q
    |||||||||||||||||||||||||||| ||||    
T  20267139 gtttgactttattttatcttttgttatagaaat 20267107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 303
Target Start/End: Original strand, 23952193 - 23952229
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||| |||||||||||||||||| |||||||||    
T  23952193 tttgacttaattttatcttttgttatagaaataactt 23952229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 24887358 - 24887402
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||| || ||||||||||||||||||| |||||||| |||||    
T  24887358 atatgaatacagtttgactttattttatctattgttatagaaata 24887402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 299
Target Start/End: Complemental strand, 26990717 - 26990685
Alignment:
Q  267 tttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||||||||||||||||||| |||||    
T  26990717 tttgactttattttatcttttgttatagaaata 26990685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 30669064 - 30669104
Alignment:
Q  274 ttattttatcttttgttataaaaataacttttatataaaca 314  Q
    |||||||||||||||||||||||||| ||| || |||||||    
T  30669064 ttattttatcttttgttataaaaatagcttatacataaaca 30669104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 32663636 - 32663589
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||| |||||||| |||||| ||||||||||||| |||||||||    
T  32663636 atatgaaaattgtttgaccttattt-atcttttgttatagaaataactt 32663589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 34954078 - 34954034
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||| | |||||||||||||||||| ||||||| |||||    
T  34954078 atatgaaaacagcttgactttattttatcttgtgttatagaaata 34954034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 42038984 - 42038940
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||| |||||||||||||  ||||||||||||| |||||    
T  42038984 atatgaaaacggtttgactttattagatcttttgttatagaaata 42038940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 43116503 - 43116547
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||| ||||||| || |||||||||||||||||| |||||    
T  43116503 atatgaaaattgtttgatttgattttatcttttgttatagaaata 43116547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 299
Target Start/End: Original strand, 49465754 - 49465782
Alignment:
Q  271 actttattttatcttttgttataaaaata 299  Q
    |||||||||||||||||||||||||||||    
T  49465754 actttattttatcttttgttataaaaata 49465782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 315
Target Start/End: Original strand, 51455869 - 51455912
Alignment:
Q  271 actttattttatcttttgttataaaaataacttttatataaacac 315  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||||    
T  51455869 actttattttatcttttgttat-aaaataatttttacataaacac 51455912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 53457371 - 53457335
Alignment:
Q  256 tatgaaaactgtttgactttattttatcttttgttat 292  Q
    ||||||||  |||||||||||||||||||||||||||    
T  53457371 tatgaaaatagtttgactttattttatcttttgttat 53457335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 3458652 - 3458604
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  3458652 atatgaaaaaagtttgactttattttatcttttgttataaaaataactt 3458604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 5998788 - 5998836
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaataacttttatataaaca 314  Q
    |||| ||||||||||||||||||||||||||||| ||| ||||||||||    
T  5998788 gtttaactttattttatcttttgttataaaaatagcttatatataaaca 5998836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 17952776 - 17952832
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    |||||||||  |||||||||||||||||||||||||||| ||||| ||| |||||||    
T  17952776 atatgaaaatagtttgactttattttatcttttgttatagaaatagcttatatataa 17952832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 18962113 - 18962157
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||| |||| |||||||||||||||||||||||||||||    
T  18962113 atatgaaaacagtttaactttattttatcttttgttataaaaata 18962157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 28803581 - 28803637
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    |||||||| | |||||||||||||||||||||||||||  ||||||||| |||||||    
T  28803581 atatgaaatcagtttgactttattttatcttttgttatcgaaataacttatatataa 28803637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 33192188 - 33192132
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    |||||||||| |||||||||||||||||||| ||||||| |||||  ||||||||||    
T  33192188 atatgaaaacagtttgactttattttatcttatgttatagaaatagtttttatataa 33192132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 315
Target Start/End: Original strand, 5045245 - 5045292
Alignment:
Q  268 ttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    |||||||||||||||||||||||||||||||| ||| || ||||||||    
T  5045245 ttgactttattttatcttttgttataaaaatagcttatacataaacac 5045292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 311
Target Start/End: Original strand, 32098384 - 32098439
Alignment:
Q  256 tatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    |||||||||  ||||||||||||||||||||||||||| ||||| ||| |||||||    
T  32098384 tatgaaaacactttgactttattttatcttttgttatagaaatagcttatatataa 32098439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 309
Target Start/End: Original strand, 1939407 - 1939461
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatat 309  Q
    |||||||||  |||| ||||||||||||||||||||||| ||||||||| |||||    
T  1939407 atatgaaaatagtttcactttattttatcttttgttatagaaataacttatatat 1939461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 311
Target Start/End: Original strand, 9878768 - 9878813
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    |||||| ||||||||||||||||||||| ||||| |||||||||||    
T  9878768 gtttgagtttattttatcttttgttatagaaatagcttttatataa 9878813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 298
Target Start/End: Complemental strand, 26167731 - 26167698
Alignment:
Q  265 tgtttgactttattttatcttttgttataaaaat 298  Q
    ||||||||||||||||||||||||||||||||||    
T  26167731 tgtttgactttattttatcttttgttataaaaat 26167698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 3423855 - 3423903
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    |||||||||||||||||||||| || ||||||||||| || ||||||||    
T  3423855 tttgactttattttatcttttggtacaaaaataacttatacataaacac 3423903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 10143167 - 10143119
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    |||| ||||| ||||||||| |||||||||||||||||| |||||||||    
T  10143167 atataaaaacagtttgacttaattttatcttttgttatagaaataactt 10143119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 14666543 - 14666495
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||| | ||||||||||||||||||||||||||| |||| |||||    
T  14666543 atatgaaatcagtttgactttattttatcttttgttatcaaaacaactt 14666495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 311
Target Start/End: Original strand, 29628837 - 29628873
Alignment:
Q  275 tattttatcttttgttataaaaataacttttatataa 311  Q
    ||||||||||||||||||| |||||||||||||||||    
T  29628837 tattttatcttttgttatagaaataacttttatataa 29628873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 30537602 - 30537662
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    ||||||||||||||||||||||| | |||||| |||||| ||||| |||  ||||||||||    
T  30537602 atatgaaaactgtttgactttatatgatctttagttatagaaatagcttacatataaacac 30537662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 31461421 - 31461377
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||    
T  31461421 tttgactttattttatcttttgttatagaaatagcttatatataa 31461377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 315
Target Start/End: Complemental strand, 7283012 - 7282953
Alignment:
Q  256 tatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    ||||||||| ||||||||| ||||| |||||| ||||||||||| ||| || ||||||||    
T  7283012 tatgaaaacagtttgacttcattttttcttttcttataaaaatagcttatacataaacac 7282953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 297
Target Start/End: Complemental strand, 6546961 - 6546931
Alignment:
Q  267 tttgactttattttatcttttgttataaaaa 297  Q
    |||||||||||||||||||||||||||||||    
T  6546961 tttgactttattttatcttttgttataaaaa 6546931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 293
Target Start/End: Complemental strand, 33256735 - 33256697
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttata 293  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  33256735 atatgaaaacagtttgactttattttatctattgttata 33256697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 14209272 - 14209235
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttat 292  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  14209272 atatgaaaacagtttgaatttattttatcttttgttat 14209235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 29729917 - 29729876
Alignment:
Q  258 tgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||| |||| |||||| ||||||||||||||||||||||    
T  29729917 tgaaaacagtttcactttaatttatcttttgttataaaaata 29729876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 31740034 - 31740083
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttt 304  Q
    |||||||||  ||||||||||||||||||||| |||||| ||||| ||||    
T  31740034 atatgaaaatagtttgactttattttatctttagttatagaaatagcttt 31740083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 32615370 - 32615423
Alignment:
Q  258 tgaaaactgtttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    ||||||| |||||| |||| |||||||||||||||| |||| |||| |||||||    
T  32615370 tgaaaacagtttgattttagtttatcttttgttatagaaatcacttatatataa 32615423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 287
Target Start/End: Original strand, 36863658 - 36863732
Alignment:
Q  210 cataaactctccaagatgg-ttatgaaaacaatgtataatttactcatatgaaaactgtttgactttattttatctttt 287  Q
    ||||| ||||||||||| | ||||||||||||| ||||| |||    ||| |||| |||||||||||||||||||||||    
T  36863658 cataagctctccaagatagcttatgaaaacaatttataactta----tataaaaattgtttgactttattttatctttt 36863732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 43199226 - 43199193
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataa 300  Q
    ||||||||||||||||||||||||||| ||||||    
T  43199226 tttgactttattttatcttttgttatataaataa 43199193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 303
Target Start/End: Complemental strand, 6988098 - 6988062
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  6988098 tttgactttattttatcttttgttatagaaaaaactt 6988062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 13630356 - 13630404
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||||| |||||||||||| |||||||||| || | |||||||||    
T  13630356 atatgaaaacagtttgactttatcttatcttttgatagagaaataactt 13630404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 301
Target Start/End: Original strand, 33576675 - 33576715
Alignment:
Q  261 aaactgtttgactttattttatcttttgttataaaaataac 301  Q
    |||| ||||||||||||| |||||||||||||| |||||||    
T  33576675 aaacagtttgactttattgtatcttttgttatagaaataac 33576715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 34054976 - 34055020
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||| |||| ||||| |||||||||||||||||||||| |||||    
T  34054976 atatgtaaacagtttgcctttattttatcttttgttatagaaata 34055020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 303
Target Start/End: Complemental strand, 34339889 - 34339853
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||||||||||||||||||| |||||| |||||    
T  34339889 tttgactttattttatcttttgttttaaaaacaactt 34339853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 37053589 - 37053545
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||| ||||||||||||||||| || ||||||| |||||    
T  37053589 atatgaaaacagtttgactttattttattttctgttatagaaata 37053545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 38239638 - 38239686
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    |||||||| |||||||||||||||||| ||||| ||| || ||||||||    
T  38239638 tttgacttgattttatcttttgttatagaaatagcttatacataaacac 38239686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 40837503 - 40837547
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||  |||||||||| |||||||||||||||| |||||    
T  40837503 atatgaaaacaatttgactttaatttatcttttgttatagaaata 40837547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 42817445 - 42817497
Alignment:
Q  249 ttactcatatgaaaactgtttgactttattttatcttttgttataaaaataac 301  Q
    ||||| |||||||||| | ||||||| ||||||||||||| |||| |||||||    
T  42817445 ttacttatatgaaaacagcttgacttcattttatcttttggtatagaaataac 42817497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 315
Target Start/End: Complemental strand, 38561710 - 38561661
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    |||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  38561710 gtttgactttattttatcttttgttatataaataacttatatatagacac 38561661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 311
Target Start/End: Original strand, 41620378 - 41620422
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||    
T  41620378 tttgactttattttatcttttgttacaaaaataacttatatataa 41620422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 311
Target Start/End: Complemental strand, 34563244 - 34563189
Alignment:
Q  256 tatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    |||||||| ||||||||||||||||||| ||||| ||| ||||||||| |||||||    
T  34563244 tatgaaaattgtttgactttattttatcctttgtcatagaaataacttatatataa 34563189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 303
Target Start/End: Original strand, 40728498 - 40728541
Alignment:
Q  260 aaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    ||||| |||||||||||||||||||||||||||| |||||||||    
T  40728498 aaaacagtttgactttattttatcttttgttatagaaataactt 40728541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 325
Target Start/End: Original strand, 1892302 - 1892356
Alignment:
Q  271 actttattttatcttttgttataaaaataacttttatataaacacacctatgcta 325  Q
    ||||||||||| ||||||||||||||||| ||| ||||||||||||  |||||||    
T  1892302 actttattttaccttttgttataaaaatagcttatatataaacacagatatgcta 1892356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 303
Target Start/End: Complemental strand, 26820183 - 26820146
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||||||||||||||||||||||| |||||||||    
T  26820183 gtttgactttattttatcttttgttatagaaataactt 26820146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 315
Target Start/End: Complemental strand, 1664362 - 1664318
Alignment:
Q  271 actttattttatcttttgttataaaaataacttttatataaacac 315  Q
    ||||||||||| ||||||||||||||||| ||| |||||||||||    
T  1664362 actttattttaccttttgttataaaaatagcttatatataaacac 1664318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 6918258 - 6918314
Alignment:
Q  259 gaaaactgtttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    |||||| |||||||||||||||||||||| ||||| ||||| ||| |||| ||||||    
T  6918258 gaaaacagtttgactttattttatcttttattatataaatagcttatatacaaacac 6918314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 303
Target Start/End: Complemental strand, 29699237 - 29699201
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||||||||||||||||||||| |||||||||    
T  29699237 tttgactttattttatcttttgttatagaaataactt 29699201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 301
Target Start/End: Complemental strand, 8799389 - 8799354
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaataac 301  Q
    |||||||||||||||||||||||||||| |||||||    
T  8799389 gtttgactttattttatcttttgttatagaaataac 8799354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 315
Target Start/End: Complemental strand, 3945251 - 3945209
Alignment:
Q  273 tttattttatcttttgttataaaaataacttttatataaacac 315  Q
    ||||||||||||||||||||  ||||||||| |||||||||||    
T  3945251 tttattttatcttttgttattgaaataacttatatataaacac 3945209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 297
Target Start/End: Complemental strand, 6950317 - 6950275
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaa 297  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||    
T  6950317 atatgaaaacagtttgtctttactttatcttttgttataaaaa 6950275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 10437875 - 10437837
Alignment:
Q  260 aaaactgtttgactttattttatcttttgttataaaaat 298  Q
    ||||| |||||||||||||||||||||||||||| ||||    
T  10437875 aaaacagtttgactttattttatcttttgttatagaaat 10437837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 301
Target Start/End: Complemental strand, 11494148 - 11494102
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataac 301  Q
    |||||||||  |||||||||||| |||||||||||||| ||||||||    
T  11494148 atatgaaaaaagtttgactttatgttatcttttgttatgaaaataac 11494102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 310
Target Start/End: Original strand, 40280281 - 40280335
Alignment:
Q  256 tatgaaaactgtttgactttattttatcttttgttataaaaataacttttatata 310  Q
    |||||||||  ||| |||||||||||||||||||| || ||||||||| ||||||    
T  40280281 tatgaaaacaattttactttattttatcttttgttgtagaaataacttatatata 40280335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 297
Target Start/End: Original strand, 42237497 - 42237539
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaa 297  Q
    ||||||||||  ||| |||||||||||||||||||||||||||    
T  42237497 atatgaaaacaatttaactttattttatcttttgttataaaaa 42237539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 299
Target Start/End: Original strand, 11119085 - 11119118
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||||||||||||||||||||| |||||    
T  11119085 gtttgactttattttatcttttgttatagaaata 11119118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 12224973 - 12225022
Alignment:
Q  254 catatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||||  ||||||||||||||||||||||||  || |||||||||    
T  12224973 catatgaaaatagtttgactttattttatcttttgtcttagaaataactt 12225022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 293
Target Start/End: Complemental strand, 20672762 - 20672729
Alignment:
Q  260 aaaactgtttgactttattttatcttttgttata 293  Q
    ||||| ||||||||||||||||||||||||||||    
T  20672762 aaaacagtttgactttattttatcttttgttata 20672729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 299
Target Start/End: Original strand, 31315539 - 31315572
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||||||||||||||| |||||||||||    
T  31315539 gtttgactttattttatcttttattataaaaata 31315572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 291
Target Start/End: Original strand, 35298556 - 35298589
Alignment:
Q  258 tgaaaactgtttgactttattttatcttttgtta 291  Q
    ||||||||||||| ||||||||||||||||||||    
T  35298556 tgaaaactgtttggctttattttatcttttgtta 35298589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 299
Target Start/End: Original strand, 39392747 - 39392780
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||||||||||||||||||||| |||||    
T  39392747 gtttgactttattttatcttttgttatagaaata 39392780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 315
Target Start/End: Complemental strand, 1667024 - 1666980
Alignment:
Q  271 actttattttatcttttgttataaaaataacttttatataaacac 315  Q
    ||||||||| | ||||||||||||||||| ||| |||||||||||    
T  1667024 actttatttgaccttttgttataaaaatagcttatatataaacac 1666980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 299
Target Start/End: Original strand, 2364560 - 2364592
Alignment:
Q  267 tttgactttattttatcttttgttataaaaata 299  Q
    |||||||||||||||||||||| ||||||||||    
T  2364560 tttgactttattttatcttttgctataaaaata 2364592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 2699301 - 2699241
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    |||||||||  |||| |||||||||||| ||||||| || ||||||||| |||||| ||||    
T  2699301 atatgaaaatagtttaactttattttatattttgttgtagaaataacttatatatagacac 2699241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 299
Target Start/End: Original strand, 11569546 - 11569578
Alignment:
Q  267 tttgactttattttatcttttgttataaaaata 299  Q
    |||| ||||||||||||||||||||||||||||    
T  11569546 tttgtctttattttatcttttgttataaaaata 11569578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 12361187 - 12361131
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    ||||||||||  |||||||| |||||||||||  ||||| ||||||||| |||||||    
T  12361187 atatgaaaacaatttgacttcattttatctttatttatagaaataacttatatataa 12361131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 299
Target Start/End: Complemental strand, 14482185 - 14482153
Alignment:
Q  267 tttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||||||||||||||||||| |||||    
T  14482185 tttgactttattttatcttttgttatagaaata 14482153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 299
Target Start/End: Complemental strand, 26370971 - 26370939
Alignment:
Q  267 tttgactttattttatcttttgttataaaaata 299  Q
    |||||||||||||||||||||||| ||||||||    
T  26370971 tttgactttattttatcttttgttgtaaaaata 26370939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 27728096 - 27728140
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||  |||||||||||||||||||||| ||||| |||||    
T  27728096 atatgaaaatagtttgactttattttatctttttttatagaaata 27728140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 34788502 - 34788546
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||| |||| ||||||||||||||||||||| || |||||||||    
T  34788502 atatggaaacagtttgactttattttatctttggtcataaaaata 34788546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000008; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 7243639 - 7243595
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||    
T  7243639 atataaaaactgtttgacgttattttatcttttgttataaaaata 7243595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 39591542 - 39591590
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||||    
T  39591542 atatgaaaacaatttgactttattttatcttttgttatagaaataactt 39591590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 1373615 - 1373666
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactttta 306  Q
    |||||||||  ||||||||||| |||||||||||| ||||||||||||||||    
T  1373615 atatgaaaaaagtttgactttaatttatcttttgtcataaaaataactttta 1373666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 5939074 - 5939019
Alignment:
Q  260 aaaactgtttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    |||| ||||||||||||||| || |||||||||||||||||||| || ||||||||    
T  5939074 aaaattgtttgactttatttaattttttgttataaaaataacttatacataaacac 5939019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 293
Target Start/End: Original strand, 5006584 - 5006622
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttata 293  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  5006584 atatgaaaacagtttgactttattttatcttttgttata 5006622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 5276216 - 5276175
Alignment:
Q  258 tgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  5276216 tgaaaacggtttgactttatgttatcttttgttataaaaata 5276175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 17989098 - 17989139
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaa 296  Q
    |||||||||| ||||||||||||||||| |||||||||||||    
T  17989098 atatgaaaacagtttgactttattttatattttgttataaaa 17989139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 1417259 - 1417215
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||    
T  1417259 atatgaaaacaatttgactttattttatcttttgttatataaata 1417215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 5715117 - 5715173
Alignment:
Q  259 gaaaactgtttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    ||||| |||||||||||||||||||||| |||||| ||||| ||| |||| ||||||    
T  5715117 gaaaattgtttgactttattttatctttcgttatagaaatagcttatatagaaacac 5715173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 42656498 - 42656454
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||    
T  42656498 tttgactttattttatcttttgttatagaaatagcttatatataa 42656454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 299
Target Start/End: Complemental strand, 2999181 - 2999142
Alignment:
Q  260 aaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  2999181 aaaacggtttgactttattttatcttttgttatagaaata 2999142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 311
Target Start/End: Complemental strand, 3241435 - 3241380
Alignment:
Q  256 tatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    ||||||||| ||||||||||||||| | |||||||||| ||||| ||| |||||||    
T  3241435 tatgaaaacagtttgactttattttttattttgttatagaaatagcttctatataa 3241380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 315
Target Start/End: Complemental strand, 30134031 - 30133984
Alignment:
Q  268 ttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    ||||||||||||||||||||||| |||||||| ||| || ||||||||    
T  30134031 ttgactttattttatcttttgttgtaaaaatagcttatacataaacac 30133984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 295
Target Start/End: Original strand, 44239056 - 44239095
Alignment:
Q  256 tatgaaaactgtttgactttattttatcttttgttataaa 295  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  44239056 tatgaaaacattttgactttattttatcttttgttataaa 44239095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 313
Target Start/End: Complemental strand, 8680975 - 8680929
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataacttttatataaac 313  Q
    |||||||||||| |||||||||||| ||||||||||| || ||||||    
T  8680975 tttgactttattatatcttttgttacaaaaataacttatacataaac 8680929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 293
Target Start/End: Original strand, 9527165 - 9527203
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttata 293  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  9527165 atatgaaaacagtttgactttattatatcttttgttata 9527203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 293
Target Start/End: Original strand, 45777246 - 45777284
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttata 293  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  45777246 atatgaaaacagtttgacttaattttatcttttgttata 45777284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 47004084 - 47004022
Alignment:
Q  253 tcatatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    |||||| ||||  ||||||||||||||||||| |||||||| ||||| |||  ||||||||||    
T  47004084 tcatataaaaatagtttgactttattttatctattgttatagaaatagcttacatataaacac 47004022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 303
Target Start/End: Complemental strand, 6630584 - 6630547
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaataactt 303  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  6630584 gtttaactttattttatcttttgttgtaaaaataactt 6630547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 7623118 - 7623085
Alignment:
Q  270 gactttattttatcttttgttataaaaataactt 303  Q
    |||||||||||| |||||||||||||||||||||    
T  7623118 gactttattttaccttttgttataaaaataactt 7623085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 299
Target Start/End: Complemental strand, 31341178 - 31341145
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||||||||||||||||||||| |||||    
T  31341178 gtttgactttattttatcttttgttatacaaata 31341145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 315
Target Start/End: Original strand, 35808990 - 35809039
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    |||||||| ||||||||||||||||||| ||||| ||| || ||||||||    
T  35808990 gtttgactatattttatcttttgttatagaaatagcttatacataaacac 35809039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 2727435 - 2727479
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||  ||||| |||||||||||||||||||||| |||||    
T  2727435 atatgaaaagagtttgcctttattttatcttttgttatagaaata 2727479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 4966151 - 4966095
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    |||||||||||||||||  |||||||||| |||||| |  ||||||||| |||||||    
T  4966151 atatgaaaactgtttgatattattttatcctttgttgtggaaataacttatatataa 4966095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 299
Target Start/End: Original strand, 7100706 - 7100738
Alignment:
Q  267 tttgactttattttatcttttgttataaaaata 299  Q
    ||||||||| |||||||||||||||||||||||    
T  7100706 tttgacttttttttatcttttgttataaaaata 7100738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 299
Target Start/End: Complemental strand, 8445269 - 8445237
Alignment:
Q  267 tttgactttattttatcttttgttataaaaata 299  Q
    |||| ||||||||||||||||||||||||||||    
T  8445269 tttgtctttattttatcttttgttataaaaata 8445237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 11208444 - 11208388
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    |||||||||| |||||| |||||||||||||||||| || || || ||| |||||||    
T  11208444 atatgaaaacggtttgagtttattttatcttttgttgtagaattatcttatatataa 11208388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 12835012 - 12835056
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||  |||||||||||||||||||||||| || |||||    
T  12835012 atatgaaaacaatttgactttattttatcttttgttgtagaaata 12835056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 21853207 - 21853247
Alignment:
Q  271 actttattttatcttttgttataaaaataacttttatataa 311  Q
    ||||||||||||||||||| ||| ||||||||| |||||||    
T  21853207 actttattttatcttttgtaatagaaataacttatatataa 21853247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 23918952 - 23918904
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||||  ||||||||||||||||||||||| ||| | |||||||    
T  23918952 atatgaaaacaatttgactttattttatcttttgtaatagagataactt 23918904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 24973927 - 24973883
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    ||||| ||||||||||||||||||||| ||||| |||||| ||||    
T  24973927 tttgaatttattttatcttttgttatagaaatagcttttacataa 24973883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 29363513 - 29363473
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaa 295  Q
    |||||||||| |||||||||||||||||||| |||| ||||    
T  29363513 atatgaaaacagtttgactttattttatcttctgttgtaaa 29363473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 30160966 - 30160998
Alignment:
Q  256 tatgaaaactgtttgactttattttatcttttg 288  Q
    ||||||||| |||||||||||||||||||||||    
T  30160966 tatgaaaacagtttgactttattttatcttttg 30160998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 30456525 - 30456569
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||  |||||||||||||||||||||||| || |||||    
T  30456525 atatgaaaacaatttgactttattttatcttttgttttagaaata 30456569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 33894617 - 33894574
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||| ||||||||| |||||||||||||||||| |||||    
T  33894617 atatgaaaacagtttgactt-attttatcttttgttatagaaata 33894574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 35536102 - 35536058
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||  ||||||||||||||||||| ||||||| |||||    
T  35536102 atatgaaaacaatttgactttattttatcttatgttatagaaata 35536058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 291
Target Start/End: Original strand, 45593794 - 45593830
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgtta 291  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  45593794 atatgaaaacagtttgactttattttatgttttgtta 45593830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 303
Target Start/End: Original strand, 46281218 - 46281254
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||||||||||| |||||||||| |||||||||    
T  46281218 tttgactttattttattttttgttatagaaataactt 46281254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 2027481 - 2027525
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||  ||||||||||||||||||||||||||||||||||    
T  2027481 atatgaaaatagtttgactttattttatcttttgttataaaaata 2027525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 303
Target Start/End: Complemental strand, 5328958 - 5328921
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||||||||||||||||||||||| |||||||||    
T  5328958 gtttgactttattttatcttttgttatagaaataactt 5328921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 24836286 - 24836331
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataacttttatataaa 312  Q
    ||||||||||||||||||||||||||| ||||||||| || |||||    
T  24836286 tttgactttattttatcttttgttatagaaataacttatacataaa 24836331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 303
Target Start/End: Complemental strand, 2206569 - 2206537
Alignment:
Q  271 actttattttatcttttgttataaaaataactt 303  Q
    |||||||||||||||||||||||||||||||||    
T  2206569 actttattttatcttttgttataaaaataactt 2206537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 13360734 - 13360686
Alignment:
Q  251 actcatatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||| ||||||||||| ||||||||||||||| |||||||||| |||||    
T  13360734 actcgtatgaaaactgcttgactttattttatattttgttatagaaata 13360686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 303
Target Start/End: Original strand, 28531628 - 28531664
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||||||||||||||||||||| |||||||||    
T  28531628 tttgactttattttatcttttgttatataaataactt 28531664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 3181143 - 3181182
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataa 294  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  3181143 atatgaaaacggtttgactttattttatcttttgtaataa 3181182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 27857364 - 27857317
Alignment:
Q  261 aaactgtttgactttattttatcttttgttataaaaataacttttata 308  Q
    |||| |||||||||||||||||||||||||| |||| |||||| ||||    
T  27857364 aaacagtttgactttattttatcttttgttacaaaagtaacttatata 27857317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 26491672 - 26491618
Alignment:
Q  252 ctcatatgaaaactgtttgactttattttatcttttgttataaaaataactttta 306  Q
    ||||||||||||| |  |||||||||||||||||||| |||| |||| |||||||    
T  26491672 ctcatatgaaaacaggatgactttattttatcttttgctatagaaatgactttta 26491618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 30004896 - 30004850
Alignment:
Q  257 atgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||||||||| ||||| ||||| |||||||||| |||||||||    
T  30004896 atgaaaactgtttgcctttagtttattttttgttatagaaataactt 30004850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 32975967 - 32975913
Alignment:
Q  261 aaactgtttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    |||| ||||||||||||||||| |||||||| | ||||||||| || ||||||||    
T  32975967 aaacagtttgactttattttatattttgttacagaaataacttatacataaacac 32975913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 288
Target Start/End: Complemental strand, 1497980 - 1497943
Alignment:
Q  251 actcatatgaaaactgtttgactttattttatcttttg 288  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  1497980 actcatatgaaaacagtttgactttattttaccttttg 1497943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 7714020 - 7713983
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttat 292  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  7714020 atatgaaaacaatttgactttattttatcttttgttat 7713983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 28660813 - 28660879
Alignment:
Q  229 ttatgaaaacaatgtataatttactcatatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||||| |||||||||    ||||||||   ||| |||||||||||||| ||||||||||||||    
T  28660813 ttatgaaaacaatttataattta----tatgaaaataatttaactttattttatctattgttataaaaata 28660879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 29957988 - 29958029
Alignment:
Q  258 tgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||| ||| |||||||||||| |||||||||||||||||    
T  29957988 tgaaaacagttcgactttattttaccttttgttataaaaata 29958029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 299
Target Start/End: Complemental strand, 30865466 - 30865433
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||||||||||||||||||||| |||||    
T  30865466 gtttgactttattttatcttttgttatagaaata 30865433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 33068639 - 33068684
Alignment:
Q  258 tgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||| ||||||  |||||||||||||||||||| |||||||||    
T  33068639 tgaaaacagtttgatattattttatcttttgttatagaaataactt 33068684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 1402991 - 1402947
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||  |||| ||||||||||||||||||||||| |||||    
T  1402991 atatgaaaatagtttaactttattttatcttttgttatagaaata 1402947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 3171506 - 3171550
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||| ||||| ||| ||||| ||||||||||||||||||||||||    
T  3171506 atattaaaacagttcgacttaattttatcttttgttataaaaata 3171550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 4248941 - 4248897
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataacttttatataa 311  Q
    ||||||||||||||||||||||||||  ||||| ||| |||||||    
T  4248941 tttgactttattttatcttttgttattgaaatagcttatatataa 4248897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 293
Target Start/End: Complemental strand, 4420606 - 4420574
Alignment:
Q  261 aaactgtttgactttattttatcttttgttata 293  Q
    |||| ||||||||||||||||||||||||||||    
T  4420606 aaacagtttgactttattttatcttttgttata 4420574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 299
Target Start/End: Complemental strand, 5551445 - 5551413
Alignment:
Q  267 tttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||||||||||||||||||| |||||    
T  5551445 tttgactttattttatcttttgttatataaata 5551413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 303
Target Start/End: Original strand, 6016466 - 6016498
Alignment:
Q  271 actttattttatcttttgttataaaaataactt 303  Q
    |||||||||||||||||||||| ||||||||||    
T  6016466 actttattttatcttttgttatgaaaataactt 6016498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 7785817 - 7785865
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    |||||||||  ||||||||||||||||||||||| |||| || ||||||    
T  7785817 atatgaaaagagtttgactttattttatcttttggtatataagtaactt 7785865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 287
Target Start/End: Complemental strand, 10154216 - 10154184
Alignment:
Q  255 atatgaaaactgtttgactttattttatctttt 287  Q
    |||||||||| ||||||||||||||||||||||    
T  10154216 atatgaaaacagtttgactttattttatctttt 10154184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 22742361 - 22742317
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||  ||||||||||||||||| ||||||||| |||||    
T  22742361 atatgaaaacaatttgactttattttatcctttgttatacaaata 22742317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 29274304 - 29274348
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||  |||||||||||||||||||||| |||| |||||    
T  29274304 atatgaaaacaatttgactttattttatcttttgctatagaaata 29274348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000008; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 14295501 - 14295457
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||| |||||||||||||||||||||||||||| |||||    
T  14295501 atatgaaaacagtttgactttattttatcttttgttatagaaata 14295457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 28586841 - 28586885
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||| |||||||||||||||||||||||||||| |||||    
T  28586841 atatgaaaacagtttgactttattttatcttttgttatagaaata 28586885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 35135737 - 35135797
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataacttttatataaacac 315  Q
    |||||||||  |||||||||||||||||||||||||||| ||||| ||| || ||||||||    
T  35135737 atatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacataaacac 35135797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 11615491 - 11615449
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataacttttatat 309  Q
    ||||||||||||||||||||||||||||||||| ||| |||||    
T  11615491 tttgactttattttatcttttgttataaaaatagcttatatat 11615449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 301
Target Start/End: Original strand, 29117009 - 29117051
Alignment:
Q  259 gaaaactgtttgactttattttatcttttgttataaaaataac 301  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  29117009 gaaaacagtttgactttattttatcttttgttatagaaataac 29117051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 583848 - 583889
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaa 296  Q
    |||||||||| |||||||||||||||||||| ||||||||||    
T  583848 atatgaaaacagtttgactttattttatcttctgttataaaa 583889  T

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Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 37063149 - 37063193
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||  |||||||||||||||||||||||||||| |||||    
T  37063149 atatgaaaatagtttgactttattttatcttttgttatagaaata 37063193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 42181167 - 42181211
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||  ||||||||| |||||||||||||||||||||||    
T  42181167 atatgaaaaccatttgactttgttttatcttttgttataaaaata 42181211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 301
Target Start/End: Complemental strand, 985625 - 985582
Alignment:
Q  258 tgaaaactgtttgactttattttatcttttgttataaaaataac 301  Q
    ||||||| |||||||||||||||||||||||||||  |||||||    
T  985625 tgaaaacagtttgactttattttatcttttgttatggaaataac 985582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 299
Target Start/End: Original strand, 7096203 - 7096246
Alignment:
Q  256 tatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||  |||||||||||||||||||||||||||| |||||    
T  7096203 tatgaaaatggtttgactttattttatcttttgttatagaaata 7096246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 37526274 - 37526325
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactttta 306  Q
    ||||||||||| ||||| || |||||||||||| ||||| ||||||||||||    
T  37526274 atatgaaaactttttgatttgattttatcttttattatagaaataactttta 37526325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 37690712 - 37690763
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactttta 306  Q
    ||||||||||| ||||| || |||||||||||| ||||| ||||||||||||    
T  37690712 atatgaaaactttttgatttgattttatcttttattatagaaataactttta 37690763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 10303794 - 10303752
Alignment:
Q  257 atgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    ||||||||  ||||||||||||||||||||||||||| |||||    
T  10303794 atgaaaacaatttgactttattttatcttttgttatagaaata 10303752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 305
Target Start/End: Original strand, 37588435 - 37588485
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactttt 305  Q
    ||||||||||| ||||| || |||||||||||| ||||| |||||||||||    
T  37588435 atatgaaaactttttgatttgattttatcttttattatagaaataactttt 37588485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 300
Target Start/End: Original strand, 39823207 - 39823241
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaataa 300  Q
    |||||||||||||||||||||||||||| ||||||    
T  39823207 gtttgactttattttatcttttgttatataaataa 39823241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 1019523 - 1019563
Alignment:
Q  259 gaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||| ||||||||||| ||||||||||||||| ||||||    
T  1019523 gaaaacagtttgactttagtttatcttttgttattaaaata 1019563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 20982210 - 20982254
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||| | |||||||||||||||| ||||||||| |||||    
T  20982210 atatgaaaacgggttgactttattttatcctttgttatagaaata 20982254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 303
Target Start/End: Original strand, 32969204 - 32969240
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  32969204 tttgactttattttatcttttgttatagaaacaactt 32969240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 299
Target Start/End: Original strand, 35095870 - 35095902
Alignment:
Q  267 tttgactttattttatcttttgttataaaaata 299  Q
    ||||||||||||||||||||||||||| |||||    
T  35095870 tttgactttattttatcttttgttatagaaata 35095902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 36639516 - 36639472
Alignment:
Q  256 tatgaaaactgtttgactttattttatcttttgttataaaaataa 300  Q
    |||||||||  ||||| ||||||||||||||||||||||| ||||    
T  36639516 tatgaaaacattttgattttattttatcttttgttataaagataa 36639472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 36646231 - 36646191
Alignment:
Q  259 gaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||| ||||||||||| |||||||| |||||||||||||    
T  36646231 gaaaacagtttgactttagtttatcttatgttataaaaata 36646191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 291
Target Start/End: Complemental strand, 39750138 - 39750102
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgtta 291  Q
    |||||||||  ||||||||||||||||||||||||||    
T  39750138 atatgaaaatagtttgactttattttatcttttgtta 39750102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 9850 - 9898
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||||| |||||||| ||||||| |||||||||| |||||||||    
T  9850 atatgaaaactttttgacttaattttattttttgttatagaaataactt 9898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 315
Target Start/End: Complemental strand, 6803 - 6759
Alignment:
Q  271 actttattttatcttttgttataaaaataacttttatataaacac 315  Q
    ||||||||||| ||||||||||||||||| ||| |||||||||||    
T  6803 actttattttaccttttgttataaaaatagcttatatataaacac 6759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 51563 - 51515
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||||  ||| |||||||||||| ||||||||||||||||||||    
T  51563 atatgaaaacaatttaactttattttatattttgttataaaaataactt 51515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 20174 - 20130
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaata 299  Q
    |||||| ||||||||||||||||||||||||| |||||| |||||    
T  20174 atatgataactgtttgactttattttatctttggttatagaaata 20130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 27571 - 27523
Alignment:
Q  255 atatgaaaactgtttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||||  ||||||||||||||||||| ||||||| |||||||||    
T  27571 atatgaaaacaatttgactttattttatcttctgttatagaaataactt 27523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 299
Target Start/End: Original strand, 1160 - 1193
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||||||||||||||||||||| |||||    
T  1160 gtttgactttattttatcttttgttatagaaata 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 299
Target Start/End: Complemental strand, 2815 - 2782
Alignment:
Q  266 gtttgactttattttatcttttgttataaaaata 299  Q
    |||||||||||||||||||||||||||| |||||    
T  2815 gtttgactttattttatcttttgttatagaaata 2782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 299
Target Start/End: Original strand, 63372 - 63404
Alignment:
Q  267 tttgactttattttatcttttgttataaaaata 299  Q
    |||| ||||||||||||||||||||||||||||    
T  63372 tttgtctttattttatcttttgttataaaaata 63404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 303
Target Start/End: Original strand, 58180 - 58216
Alignment:
Q  267 tttgactttattttatcttttgttataaaaataactt 303  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  58180 tttgactttatgttatcttttgttatataaataactt 58216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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