View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13007_low_1 (Length: 475)
Name: NF13007_low_1
Description: NF13007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13007_low_1 |
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Alignment Details
Target: chr4 (Bit Score: 414; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 13 - 458
Target Start/End: Original strand, 26421906 - 26422351
Alignment:
| Q |
13 |
aaaataggcaaggatgaattttgaacataatattgtaattcagatttttgtttattgttgaattttggggaaatcctgtactggtattttcggaaccata |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
26421906 |
aaaataggcaaggatgaattttgaacataatattgtaatttagatttttgtttattgttgaattttggggaaatcctgtactggtattttcgggaccata |
26422005 |
T |
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| Q |
113 |
taaatgtgttcattgtgtaaactgctgacccttggtttggtaggaataataagtgaactctatgtacctcttaaatagaacgagggaccaaaatatagaa |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
26422006 |
taaatgtgttcattgtgtaaactgctgacccttggtttggtaggaataataagtgaactctatgtacctcttaaatagaacgagggaccaaaataaagaa |
26422105 |
T |
|
| Q |
213 |
cttatcaaagatactactcaagaaatcagtcacaaaaaattcactgatgaatattgaaaagccaagcttcgctcgaaaatagatcttatttaagaggcta |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26422106 |
cttatcaaagatactactcaagaaatcagtcacaaaaaattcactgatgaatattgaaaagccaagcttcgctcgaaaatagatcttatttaagaggcta |
26422205 |
T |
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| Q |
313 |
gttagcttgttcaagagaggaaaacttgcaaacaagcgttcaaccctccgcaagcataaacacacagacaaaacatgagtcgaagacgaaaacaattccc |
412 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||| |
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| T |
26422206 |
gttagcttgttcaagagaggaaaacatgcaaacaagcgttcaaccctccacaagcataaacacacagacaaatcatgcgtcgaagacgaaaacaattccc |
26422305 |
T |
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| Q |
413 |
ttcatcaaattgaagtgttgaagaaaaactcttagacacatgcaat |
458 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
26422306 |
ttcatcaaattgaagtgttgaagaaaaactcttagactcatgcaat |
26422351 |
T |
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