View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13008_low_7 (Length: 254)
Name: NF13008_low_7
Description: NF13008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13008_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 19 - 244
Target Start/End: Complemental strand, 50895477 - 50895252
Alignment:
| Q |
19 |
ttacaaacttacaaattcaagtcttgtactacaagcttaacaacaaaataattttttctataaataaacggcattttatatatataaagtatactcatca |
118 |
Q |
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| T |
50895477 |
ttacaaacttacaaattcaagtcttgtactacaagcttaacaacaaaataattttttctataaataaacggcattttatatatataaagtatactcatca |
50895378 |
T |
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| Q |
119 |
aagagcaaaacagctgagggcattagccataacaatgaacaggcagctatctatctacagcccttcaacaaatacgaagaaggacttgaaacactcatag |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50895377 |
aagagcaaaacagctgagggcattagccataacaatgaacaggcagctatctatctacagcccttcaacaaatacgaagaaggacttgaaacactcatag |
50895278 |
T |
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| Q |
219 |
ctgaggatttgcccttatcacctttg |
244 |
Q |
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|||||||||||||||||||||||||| |
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| T |
50895277 |
ctgaggatttgcccttatcacctttg |
50895252 |
T |
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