View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1300_low_41 (Length: 231)

Name: NF1300_low_41
Description: NF1300
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1300_low_41
NF1300_low_41
[»] chr7 (34 HSPs)
chr7 (1-202)||(26508999-26509200)
chr7 (1-202)||(31083913-31084115)
chr7 (1-202)||(26663202-26663403)
chr7 (1-202)||(26678394-26678595)
chr7 (1-202)||(26519452-26519653)
chr7 (1-202)||(45393864-45394065)
chr7 (1-202)||(11447533-11447734)
chr7 (4-177)||(16443298-16443472)
chr7 (1-202)||(16744810-16745011)
chr7 (1-202)||(26441889-26442090)
chr7 (1-202)||(4138535-4138736)
chr7 (1-177)||(16047981-16048158)
chr7 (1-202)||(24585826-24586027)
chr7 (1-202)||(26268376-26268576)
chr7 (1-202)||(16511739-16511941)
chr7 (1-164)||(26313153-26313317)
chr7 (1-164)||(31557694-31557858)
chr7 (1-164)||(4206058-4206221)
chr7 (1-151)||(3451926-3452076)
chr7 (1-151)||(5154758-5154908)
chr7 (1-177)||(10848253-10848430)
chr7 (1-151)||(2779919-2780069)
chr7 (1-164)||(31130579-31130742)
chr7 (1-151)||(2161247-2161396)
chr7 (1-164)||(26596338-26596502)
chr7 (1-151)||(22148563-22148713)
chr7 (1-151)||(22152790-22152940)
chr7 (1-151)||(22208705-22208855)
chr7 (1-202)||(5140627-5140828)
chr7 (1-151)||(5165059-5165209)
chr7 (1-151)||(10910240-10910390)
chr7 (1-151)||(11418093-11418243)
chr7 (1-140)||(39206454-39206593)
chr7 (1-140)||(45737987-45738126)
[»] chr6 (45 HSPs)
chr6 (1-202)||(27623081-27623274)
chr6 (1-202)||(27283736-27283929)
chr6 (1-202)||(28214092-28214293)
chr6 (1-202)||(30551354-30551555)
chr6 (5-202)||(34457864-34458061)
chr6 (1-202)||(27064125-27064326)
chr6 (1-202)||(29579658-29579859)
chr6 (1-202)||(4779535-4779736)
chr6 (1-164)||(4539133-4539296)
chr6 (1-151)||(26927427-26927577)
chr6 (1-202)||(26666011-26666212)
chr6 (1-202)||(26771982-26772183)
chr6 (1-151)||(24299135-24299285)
chr6 (1-151)||(29508096-29508246)
chr6 (1-151)||(33369804-33369954)
chr6 (1-202)||(27355457-27355658)
chr6 (1-164)||(27200859-27201022)
chr6 (1-164)||(27248211-27248374)
chr6 (1-151)||(14138775-14138925)
chr6 (1-151)||(16756496-16756646)
chr6 (1-202)||(22928229-22928431)
chr6 (1-151)||(29556231-29556381)
chr6 (1-164)||(13517568-13517731)
chr6 (1-139)||(24870395-24870533)
chr6 (1-151)||(27209574-27209724)
chr6 (1-151)||(27239504-27239654)
chr6 (1-146)||(4764442-4764587)
chr6 (5-202)||(16680783-16680980)
chr6 (1-146)||(27031701-27031846)
chr6 (1-151)||(26792491-26792641)
chr6 (1-151)||(27014399-27014549)
chr6 (1-202)||(8899051-8899252)
chr6 (1-164)||(4531956-4532119)
chr6 (1-175)||(16937380-16937554)
chr6 (1-146)||(15405905-15406050)
chr6 (1-146)||(15417692-15417837)
chr6 (1-153)||(26109775-26109928)
chr6 (1-146)||(27025822-27025967)
chr6 (1-164)||(27491800-27491964)
chr6 (1-151)||(13292319-13292470)
chr6 (1-151)||(28167169-28167319)
chr6 (1-93)||(20131253-20131345)
chr6 (1-93)||(22201525-22201617)
chr6 (1-53)||(20175335-20175387)
chr6 (1-53)||(22160604-22160656)
[»] chr8 (24 HSPs)
chr8 (1-202)||(29835974-29836175)
chr8 (1-202)||(12086098-12086299)
chr8 (1-202)||(28355322-28355523)
chr8 (1-202)||(19681107-19681308)
chr8 (1-202)||(31483241-31483442)
chr8 (1-202)||(33265371-33265572)
chr8 (1-177)||(22074298-22074475)
chr8 (1-202)||(31361179-31361381)
chr8 (1-202)||(44567631-44567833)
chr8 (1-151)||(2130654-2130804)
chr8 (1-202)||(19654712-19654914)
chr8 (1-202)||(22139538-22139740)
chr8 (1-140)||(18716169-18716308)
chr8 (1-175)||(19694767-19694942)
chr8 (1-151)||(15774250-15774400)
chr8 (1-202)||(16260562-16260764)
chr8 (1-151)||(33249039-33249189)
chr8 (1-202)||(9361255-9361455)
chr8 (6-146)||(14569836-14569976)
chr8 (1-164)||(19201753-19201917)
chr8 (1-151)||(18797385-18797535)
chr8 (7-151)||(27602305-27602449)
chr8 (1-146)||(21341556-21341702)
chr8 (6-151)||(19910558-19910703)
[»] chr2 (39 HSPs)
chr2 (1-202)||(39896715-39896916)
chr2 (1-202)||(3789089-3789290)
chr2 (1-202)||(13930006-13930207)
chr2 (1-202)||(19409879-19410080)
chr2 (1-202)||(37932023-37932224)
chr2 (1-202)||(34297795-34297996)
chr2 (1-202)||(16822733-16822934)
chr2 (1-202)||(16898546-16898747)
chr2 (1-202)||(21670568-21670769)
chr2 (1-202)||(11628580-11628781)
chr2 (1-202)||(16168124-16168325)
chr2 (1-177)||(27397005-27397182)
chr2 (1-202)||(27810349-27810550)
chr2 (1-202)||(32056398-32056599)
chr2 (1-202)||(21696584-21696786)
chr2 (1-202)||(254047-254248)
chr2 (1-202)||(9343382-9343583)
chr2 (1-202)||(22921539-22921740)
chr2 (1-202)||(34868280-34868481)
chr2 (1-202)||(37679293-37679494)
chr2 (1-202)||(37694558-37694759)
chr2 (1-202)||(37945260-37945461)
chr2 (1-202)||(34268318-34268520)
chr2 (1-202)||(12593460-12593661)
chr2 (1-202)||(39045277-39045479)
chr2 (1-202)||(27782869-27783070)
chr2 (1-202)||(19449807-19450010)
chr2 (1-151)||(23117471-23117621)
chr2 (1-164)||(31882955-31883118)
chr2 (1-151)||(20844590-20844740)
chr2 (1-202)||(40240169-40240370)
chr2 (4-151)||(28888929-28889076)
chr2 (1-151)||(12710019-12710169)
chr2 (1-139)||(37384364-37384502)
chr2 (1-140)||(27123208-27123347)
chr2 (1-151)||(27427868-27428019)
chr2 (1-164)||(34161525-34161688)
chr2 (1-151)||(12662165-12662316)
chr2 (1-151)||(31868204-31868354)
[»] chr5 (50 HSPs)
chr5 (1-202)||(15752165-15752366)
chr5 (1-202)||(30036079-30036280)
chr5 (1-202)||(37761627-37761828)
chr5 (1-202)||(33523037-33523238)
chr5 (1-202)||(40466856-40467057)
chr5 (1-202)||(3796186-3796387)
chr5 (1-202)||(13318133-13318334)
chr5 (1-202)||(22895059-22895261)
chr5 (5-202)||(18494079-18494276)
chr5 (1-202)||(30175121-30175322)
chr5 (1-202)||(32589582-32589783)
chr5 (1-164)||(6880984-6881147)
chr5 (1-202)||(23898527-23898730)
chr5 (1-202)||(11330287-11330488)
chr5 (5-164)||(31819732-31819891)
chr5 (1-164)||(37351971-37352134)
chr5 (1-202)||(5644453-5644654)
chr5 (1-202)||(13435976-13436177)
chr5 (1-202)||(28655898-28656099)
chr5 (1-164)||(9324154-9324318)
chr5 (1-164)||(26487064-26487228)
chr5 (1-164)||(12138853-12139016)
chr5 (7-146)||(23632659-23632798)
chr5 (1-164)||(37745656-37745819)
chr5 (1-151)||(9544035-9544185)
chr5 (1-151)||(23726921-23727071)
chr5 (1-202)||(25206941-25207143)
chr5 (1-202)||(25271097-25271299)
chr5 (1-202)||(18368837-18369038)
chr5 (1-146)||(22992448-22992593)
chr5 (1-164)||(28953102-28953265)
chr5 (1-164)||(30158711-30158874)
chr5 (1-164)||(33881797-33881960)
chr5 (1-164)||(34623190-34623353)
chr5 (1-151)||(24976528-24976678)
chr5 (28-202)||(43084907-43085081)
chr5 (1-164)||(8658800-8658962)
chr5 (1-151)||(2517749-2517899)
chr5 (1-151)||(24608929-24609079)
chr5 (1-151)||(31438141-31438291)
chr5 (1-146)||(18121741-18121886)
chr5 (6-151)||(30941314-30941459)
chr5 (1-151)||(15652068-15652218)
chr5 (1-151)||(24730653-24730803)
chr5 (1-139)||(41681401-41681541)
chr5 (1-151)||(37664811-37664961)
chr5 (1-146)||(11556043-11556188)
chr5 (1-151)||(33299220-33299370)
chr5 (1-118)||(13180124-13180241)
chr5 (1-151)||(33784166-33784316)
[»] chr3 (59 HSPs)
chr3 (1-202)||(24334786-24334987)
chr3 (1-202)||(10649681-10649881)
chr3 (1-202)||(6536191-6536392)
chr3 (1-202)||(17978399-17978600)
chr3 (1-202)||(18231802-18232003)
chr3 (1-202)||(47030066-47030267)
chr3 (1-202)||(5602761-5602962)
chr3 (1-202)||(51788632-51788833)
chr3 (1-202)||(5020321-5020522)
chr3 (1-202)||(28345781-28345982)
chr3 (1-202)||(29658415-29658616)
chr3 (1-202)||(20570304-20570505)
chr3 (1-202)||(31957904-31958105)
chr3 (1-164)||(28109411-28109575)
chr3 (1-202)||(4690262-4690464)
chr3 (1-202)||(15886188-15886390)
chr3 (1-202)||(5589804-5590005)
chr3 (1-177)||(15367877-15368055)
chr3 (2-202)||(16422794-16422995)
chr3 (1-177)||(19701029-19701206)
chr3 (1-202)||(32297241-32297442)
chr3 (1-151)||(4728265-4728415)
chr3 (1-151)||(6208534-6208684)
chr3 (1-151)||(11103832-11103982)
chr3 (1-151)||(31029714-31029864)
chr3 (1-202)||(16404240-16404441)
chr3 (1-153)||(22864312-22864464)
chr3 (1-153)||(22879371-22879523)
chr3 (1-164)||(5717703-5717866)
chr3 (1-164)||(5728613-5728776)
chr3 (1-164)||(5763592-5763755)
chr3 (1-151)||(4340147-4340297)
chr3 (1-151)||(5473628-5473778)
chr3 (1-177)||(16617938-16618116)
chr3 (1-151)||(18057907-18058057)
chr3 (1-151)||(18285827-18285977)
chr3 (1-151)||(18301128-18301278)
chr3 (1-202)||(21681330-21681531)
chr3 (1-164)||(17970328-17970492)
chr3 (1-151)||(4423557-4423707)
chr3 (1-151)||(5658773-5658923)
chr3 (1-151)||(29142225-29142375)
chr3 (1-151)||(32445791-32445941)
chr3 (1-146)||(8282931-8283076)
chr3 (1-202)||(10402762-10402963)
chr3 (1-140)||(15734587-15734726)
chr3 (1-151)||(4630420-4630570)
chr3 (1-177)||(22041041-22041219)
chr3 (1-151)||(35887399-35887549)
chr3 (1-151)||(4790102-4790252)
chr3 (1-151)||(22381051-22381201)
chr3 (1-146)||(18337268-18337413)
chr3 (4-164)||(28027919-28028079)
chr3 (1-164)||(8218273-8218436)
chr3 (1-140)||(20072685-20072824)
chr3 (1-140)||(48472582-48472721)
chr3 (1-161)||(18249369-18249529)
chr3 (37-151)||(7079867-7079981)
chr3 (1-37)||(16599388-16599424)
[»] chr4 (26 HSPs)
chr4 (1-202)||(24585778-24585980)
chr4 (1-202)||(5012538-5012739)
chr4 (1-202)||(21976361-21976562)
chr4 (1-202)||(54840048-54840249)
chr4 (1-202)||(20331842-20332043)
chr4 (1-202)||(31119917-31120118)
chr4 (1-202)||(33667208-33667409)
chr4 (1-202)||(40099040-40099241)
chr4 (1-202)||(30760421-30760622)
chr4 (1-202)||(1906924-1907126)
chr4 (1-177)||(15234500-15234677)
chr4 (1-177)||(15379645-15379822)
chr4 (1-202)||(14105201-14105402)
chr4 (1-164)||(27156733-27156896)
chr4 (1-151)||(14752923-14753073)
chr4 (1-134)||(15276033-15276166)
chr4 (1-164)||(5701224-5701387)
chr4 (1-151)||(6576544-6576695)
chr4 (1-151)||(14671698-14671848)
chr4 (1-151)||(17019737-17019887)
chr4 (1-151)||(36323744-36323894)
chr4 (1-151)||(36337953-36338103)
chr4 (1-139)||(39857335-39857473)
chr4 (1-161)||(18794050-18794208)
chr4 (5-152)||(34182368-34182515)
chr4 (1-151)||(24119349-24119500)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-202)||(14590-14791)
[»] chr1 (15 HSPs)
chr1 (1-202)||(51644872-51645073)
chr1 (1-202)||(10951742-10951943)
chr1 (1-202)||(20333824-20334026)
chr1 (1-202)||(28591731-28591932)
chr1 (1-177)||(20467458-20467635)
chr1 (1-202)||(21891157-21891359)
chr1 (1-202)||(3647797-3647998)
chr1 (1-202)||(16201438-16201640)
chr1 (1-151)||(14692324-14692474)
chr1 (1-151)||(14695006-14695156)
chr1 (1-151)||(14697690-14697840)
chr1 (1-141)||(14700371-14700511)
chr1 (1-164)||(41786741-41786903)
chr1 (1-151)||(10969344-10969494)
chr1 (1-140)||(28156417-28156556)
[»] scaffold0159 (2 HSPs)
scaffold0159 (1-202)||(2584-2785)
scaffold0159 (76-202)||(18456-18582)
[»] scaffold0143 (2 HSPs)
scaffold0143 (1-202)||(10566-10768)
scaffold0143 (1-151)||(33971-34121)
[»] scaffold0322 (2 HSPs)
scaffold0322 (1-202)||(2305-2506)
scaffold0322 (1-177)||(12722-12900)
[»] scaffold0241 (1 HSPs)
scaffold0241 (1-177)||(25977-26154)
[»] scaffold0109 (1 HSPs)
scaffold0109 (1-177)||(27966-28141)
[»] scaffold0336 (1 HSPs)
scaffold0336 (1-202)||(16224-16425)
[»] scaffold0093 (1 HSPs)
scaffold0093 (1-177)||(444-621)
[»] scaffold0237 (1 HSPs)
scaffold0237 (1-164)||(8348-8511)
[»] scaffold0240 (1 HSPs)
scaffold0240 (1-151)||(24381-24531)
[»] scaffold0792 (1 HSPs)
scaffold0792 (1-151)||(4023-4173)
[»] scaffold0418 (1 HSPs)
scaffold0418 (1-151)||(12715-12865)
[»] scaffold0547 (1 HSPs)
scaffold0547 (1-146)||(9068-9214)
[»] scaffold0099 (1 HSPs)
scaffold0099 (6-151)||(40032-40181)
[»] scaffold0089 (1 HSPs)
scaffold0089 (85-151)||(6741-6807)


Alignment Details
Target: chr7 (Bit Score: 170; Significance: 2e-91; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 26508999 - 26509200
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  26508999 cacgtagtggctcgtgctacattacacattcctggaaatcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 26509098  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26509099 atcaacttgctgggggtagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggtatgttgtagatatcgcatctgtg 26509198  T
Q  201 gt 202  Q
    ||    
T  26509199 gt 26509200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 31083913 - 31084115
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  31083913 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 31084012  T
Q  101 atcaacttgc-tggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
    | |||||||| ||||||||||||||||  |||||| || ||||| ||||||||| |||||||||| |||| |||||||||||||||||||||||||||||    
T  31084013 aacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcatgtcagcgctgggtatgtcgtagatatcgcatctgt 31084112  T
Q  200 ggt 202  Q
    |||    
T  31084113 ggt 31084115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 26663202 - 26663403
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  26663202 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 26663301  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  26663302 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 26663401  T
Q  201 gt 202  Q
    ||    
T  26663402 gt 26663403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 26678394 - 26678595
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  26678394 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 26678493  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  26678494 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 26678593  T
Q  201 gt 202  Q
    ||    
T  26678594 gt 26678595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 26519653 - 26519452
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||    
T  26519653 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggta 26519554  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||| || ||||| || |||||||||    
T  26519553 tgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtg 26519454  T
Q  201 gt 202  Q
    ||    
T  26519453 gt 26519452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 45394065 - 45393864
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||| ||||| || |||||||||||| |||||||||||||||| ||| ||||| |||||||| ||||||||||||||||||||| ||||||    
T  45394065 cacgtagtggctcatgctatattacacattcttgggaatcctctttggagatgacgtcgttgagagacgtatcggaaccatggctgagggcaggtagcta 45393966  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||||  |||||||| ||||||||| |||||||||||||||| ||||||| || ||| | ||||||||||||    
T  45393965 tgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtcctgggtaagttgtaaacatcgcatctgtg 45393866  T
Q  201 gt 202  Q
    ||    
T  45393865 gt 45393864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 11447734 - 11447533
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||    
T  11447734 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggta 11447635  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||||  |||||||| ||||||||| |||||||||||||||||| ||||| || ||||| || |||||||||    
T  11447634 tgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgccgggtacgttgtagacattgcatctgtg 11447535  T
Q  201 gt 202  Q
    ||    
T  11447534 gt 11447533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 16443298 - 16443472
Alignment:
Q  4 gtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatc 103  Q
    |||||||||||||||| || |||||||| |||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||| ||||||  |    
T  16443298 gtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacgtatcggagccatggctgagggcaggtagctatgc 16443397  T
Q  104 aacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggt 177  Q
    ||||||||||||||||||||| |||||||||  |||||||||| ||||| | |||||||||||||||||||||||    
T  16443398 aacttgctggggatagaatctcggaagactctgctggggataatgccgtcattgctgggcatttcagtgctgggt 16443472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 16744810 - 16745011
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  16744810 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgacggaaccatagctgagggcaggtagata 16744909  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||||||| ||||||||||| ||| |  | |||||||||    
T  16744910 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagcgctgggtatgttgtaaacgttgcatctgtg 16745009  T
Q  201 gt 202  Q
    ||    
T  16745010 gt 16745011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 26442090 - 26441889
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||    
T  26442090 cacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggta 26441991  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||||||||||||||||  |||| | || ||||| ||||||||| |||||||||||||||| |||||||||| ||||| || |||||||||    
T  26441990 tgcaacttgctggggatagaatcttgagagaccccaccggggaaaacgccgttgtgctgggcatttcagtactgggtatgttgtagacattgcatctgtg 26441891  T
Q  201 gt 202  Q
    ||    
T  26441890 gt 26441889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 4138535 - 4138736
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| |||||||||||  || ||    
T  4138535 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggcaggta 4138634  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||  || ||| |||||||| ||||||||| |||||||||||||||| ||||||| || ||| | ||||||||||||    
T  4138635 tgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtactgggtaagttgtaaacatcgcatctgtg 4138734  T
Q  201 gt 202  Q
    ||    
T  4138735 gt 4138736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 16048158 - 16047981
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||    
T  16048158 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataaagtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 16048059  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttat-gctgggcatttcagtgctgggt 177  Q
      |||||||||||||||||||||| |||||||||   ||||||||| ||||| || |||||||||||||||| |||||    
T  16048058 tgcaacttgctggggatagaatctcggaagactctgttggggataatgccgtcatcgctgggcatttcagtgttgggt 16047981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 24585826 - 24586027
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||| ||||| ||| ||    
T  24585826 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgaaggcaggtagata 24585925  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||  || ||| |||||||| ||||||||| |||||||||||||||| ||||||| || ||| | ||||||||||||    
T  24585926 tgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtactgggtaagttgtaaacatcgcatctgtg 24586025  T
Q  201 gt 202  Q
    ||    
T  24586026 gt 24586027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 26268376 - 26268576
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  |||| | | ||||||||||||  || ||    
T  26268376 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaccta-ggctgagggcaggcaggta 26268474  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||||  |||||||| ||||||||| |||||||||||||||| |||||||||| ||||| || |||||||||    
T  26268475 tgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtactgggtatgttgtagacattgcatctgtg 26268574  T
Q  201 gt 202  Q
    ||    
T  26268575 gt 26268576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 16511739 - 16511941
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||| || ||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  16511739 cacgtaatgactcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagtta 16511838  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||| | ||| ||||||||||||||||| | | |||| ||| ||||||||||    
T  16511839 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccgtcattgccgggcatttcagtgctggatgtatcgtggatgtcgcatctgt 16511938  T
Q  200 ggt 202  Q
    |||    
T  16511939 ggt 16511941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 26313153 - 26313317
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| || |||    
T  26313153 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaacta 26313252  T
Q  101 atcaacttgc-tggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
    | |||||||| ||||||||||||||||  |||||| || ||||| ||||||||| ||||||||||    
T  26313253 aacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcat 26313317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 31557694 - 31557858
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||| |||||||||| || |||| ||||||||||||||||||||||||  || |||||||||||||| ||||||||||||||||||||| ||| ||    
T  31557694 cacgtagtagctcgtgctatattacaccttcttggaaatcctctttggagatggcgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 31557793  T
Q  101 atcaacttgc-tggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
    | |||||||| |||||||||||||||||||||||  |||||||| ||||||||| ||||||||||    
T  31557794 aacaacttgcttggggatagaatcttggaagactttactggggaaaacgccgttgtgctgggcat 31557858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 4206221 - 4206058
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| ||||||||||||| ||||||||||||| |||||||| ||| ||    
T  4206221 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtgccggaaccatggccgagggcaggtaggta 4206122  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||||||||||||||||||||||  |||||| || ||||| ||||||||| ||||||||||    
T  4206121 tgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcat 4206058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 3452076 - 3451926
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||| |||||||||||| ||| ||    
T  3452076 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtaccggagccaaggctgagggcaggtaggta 3451977  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  3451976 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 3451926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 5154908 - 5154758
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||||||    
T  5154908 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagcta 5154809  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| || |||||| |||||| |||| ||||    
T  5154808 tgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 5154758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 10848430 - 10848253
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||| | | ||||    
T  10848430 cacgtagtggctcgcgctatatcacacattcttggaaatcctctttggagataacgtcattgggagacgtatcggaaccatggctgagggcgggttgcta 10848331  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttat-gctgggcatttcagtgctgggt 177  Q
      | |||||||||||| ||||||| |||||||||  |||| ||||| ||||| || |||||||||||||||| |||||    
T  10848330 cgcgacttgctggggacagaatctcggaagactctgctggagataatgccgtcatcgctgggcatttcagtgttgggt 10848253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 2780069 - 2779919
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| ||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||| |||  |    
T  2780069 cacgtagtggctcgtgctatattacacattcctggaaatcctctttgaagatgacgccgttgggagacgtatcggaaccatggctgagggcaggtaggca 2779970  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  2779969 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 2779919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 31130742 - 31130579
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaacc-atggctgagggcagatagct 99  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||  |||||| |||||||||||||| |||||    
T  31130742 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaaccaatggctgagggcaggtagct 31130643  T
Q  100 aatcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
    |  ||||||||||||||||||||||||  |||||  |||||||| || |||||| ||||||||||    
T  31130642 atgcaacttgctggggatagaatcttgagagactttactgggga-aatgccgttgtgctgggcat 31130579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 2161396 - 2161247
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||  ||| |||||||||||||  ||||||||||||||||||||| ||||||    
T  2161396 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagacgacgtcgttgggagacgtgtcggaaccatggctgagggcag-tagcta 2161298  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| || |||||| |||||| |||| ||||    
T  2161297 tgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 2161247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 26596502 - 26596338
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaacc-atggctgagggcagatagct 99  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||| || ||||||||||| ||| |    
T  26596502 cacgtagtggctcatgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccaatagctgagggcaggtagat 26596403  T
Q  100 aatcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
    |  ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||    
T  26596402 atgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcat 26596338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 22148713 - 22148563
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||| ||||||||||||| |||  |    
T  22148713 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccctggctgagggcaggtaggca 22148614  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||| ||||||||||| |||| ||||||||| |||||| |||| ||||    
T  22148613 tgcaactggctggggataggatctcggaagactctactgggaataatgccg 22148563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 22152940 - 22152790
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||| ||||||||||||| |||  |    
T  22152940 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccctggctgagggcaggtaggca 22152841  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||| ||||||||||| |||| ||||||||| |||||| |||| ||||    
T  22152840 tgcaactggctggggataggatctcggaagactctactgggaataatgccg 22152790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 22208855 - 22208705
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||| ||||||||||||| |||  |    
T  22208855 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccctggctgagggcaggtaggca 22208756  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||| ||||||||||| |||| ||||||||| |||||| |||| ||||    
T  22208755 tgcaactggctggggataggatctcggaagactctactgggaataatgccg 22208705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 5140627 - 5140828
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||  | ||||||||| ||| ||||||| ||||||| ||| | |||||||||||| |||||||||||| |||||| | ||| ||    
T  5140627 cacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcattgggagacgtatcggaaccatggccgagggccggtaggta 5140726  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
       ||||||||||||||| | |||||  |||||| |  ||||| ||||||||| |||||||||||||| |||||||||||| ||||| || |||||||||    
T  5140727 tgtaacttgctggggataaagtcttgagagactccaacggggaaaacgccgttgtgctgggcatttcaatgctgggtatgttgtagacattgcatctgtg 5140826  T
Q  201 gt 202  Q
    ||    
T  5140827 gt 5140828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 5165209 - 5165059
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||| |||  |||||||||| | ||||||    
T  5165209 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcgggacctaggctgagggccggtagcta 5165110  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||| |||||| |||||| ||| ||||||| ||||    
T  5165109 tgcaacttgctggggatagagtcttgggagactctactagggataatgccg 5165059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 10910240 - 10910390
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||| |||||||||||| || |||||||| |||||||||||||||||||| |||  ||||||||||||| ||| ||||||||||||||||| ||||||    
T  10910240 cacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgttgttgggagacgtatcgggaccatggctgagggcaggtagcta 10910339  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||| ||||||||||| || |||||| |||||| |||| ||||    
T  10910340 tgcaacttgctgaggatagaatctcgggagactctactgggaataatgccg 10910390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 11418093 - 11418243
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || || ||||| |||||||||||||||||||| ||| |||||||||||||| ||| |||  |||||||||| | ||||||    
T  11418093 cacgtagtggctcgtgctatattacgcattcctggaaatcctctttggagatgacgtcgttgggagacgtatcgggacctaggctgagggccggtagcta 11418192  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||||||||||||||||||||||| |||||| |||||| |||| ||||    
T  11418193 tgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 11418243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 39206454 - 39206593
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||| |||  |||||||||| | ||||||    
T  39206454 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggccggtagcta 39206553  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactgg 140  Q
      |||||||||| |||||||||||||| |||||| |||||    
T  39206554 tgcaacttgctgaggatagaatcttgggagactctactgg 39206593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 45738126 - 45737987
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||| |||  |||||||||| | ||||||    
T  45738126 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggccggtagcta 45738027  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactgg 140  Q
      ||| ||||||||||||||||||||| |||||| |||||    
T  45738026 tgcaatttgctggggatagaatcttgggagactctactgg 45737987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 153; Significance: 3e-81; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 27623081 - 27623274
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||||||| |        ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  27623081 cacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccagaaccatggctgagggtagatagcta 27623172  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27623173 atcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggtatgttgtagatatcgcatctgtg 27623272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 27283736 - 27283929
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||||||| |        |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27283736 cacgtagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggtagatagcta 27283827  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
    |||||||| |||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  27283828 atcaacttactggggatagaattctggaagacccgactggggataacgccgttatgctgggcatttcagtgctgggtacgtcgtagatatcgcatctatg 27283927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 28214293 - 28214092
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  28214293 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 28214194  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      |||||||||||  || |||||| ||||| ||  |||||||| |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||    
T  28214193 tacaacttgctggaaattgaatctcggaaggctttactggggaaaacgccgttatgctgggcatttcagtgctgggtacgttgtagacatcgcatctgtg 28214094  T
Q  201 gt 202  Q
    ||    
T  28214093 gt 28214092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 30551354 - 30551555
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||||||    
T  30551354 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagcta 30551453  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      || ||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||| ||||||||||| ||||| || |||||||||    
T  30551454 tgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgttgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtg 30551553  T
Q  201 gt 202  Q
    ||    
T  30551554 gt 30551555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 5 - 202
Target Start/End: Original strand, 34457864 - 34458061
Alignment:
Q  5 tagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatca 104  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||    
T  34457864 tagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgca 34457963  T
Q  105 acttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtggt 202  Q
    ||||||||| |||||| |||||||||||  ||||||||| || |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  34457964 acttgctggagatagagtcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggtatgttgtagacatcgcatctgtggt 34458061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 27064326 - 27064125
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||||||||||||||  |  ||    
T  27064326 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaaccatggctgagggcaggcaagta 27064227  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      | ||||||||| |||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| |||||||||||  |||| || |||||||||    
T  27064226 tgcgacttgctggagatagaatcttggaagacccgactggggaaaacgccgttgtgctgggcatttcagcgctgggtatgttatagacattgcatctgtg 27064127  T
Q  201 gt 202  Q
    ||    
T  27064126 gt 27064125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 29579859 - 29579658
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||| ||||||| || ||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| |     
T  29579859 cacgtagtggcccgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtg 29579760  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  29579759 tgcaacttgctggagatagaatcttggaagacctgactggggagaatgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 29579660  T
Q  201 gt 202  Q
    ||    
T  29579659 gt 29579658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 4779736 - 4779535
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||| |||  ||||||||||||  || ||    
T  4779736 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggcaggcaggta 4779637  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||||  |||||||| ||||||||| |||||||||||||||||||| ||| || ||||| || |||||||||    
T  4779636 tgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgctgagtacgttgtagacattgcatctgtg 4779537  T
Q  201 gt 202  Q
    ||    
T  4779536 gt 4779535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 4539133 - 4539296
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  4539133 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 4539232  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      |||||||||||||||||||||| |  |||||  ||||||||||| |||||| ||||||||||    
T  4539233 tgcaacttgctggggatagaatctcgagagactttactggggataatgccgttgtgctgggcat 4539296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 26927577 - 26927427
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||||    
T  26927577 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagataacgccgttgggagacgtatcggaaccaaggctgaggatagatagcta 26927478  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
    ||||||| |||||||||||||||| || |||||| |||||| |||| ||||    
T  26927477 atcaactcgctggggatagaatctcgggagactctactgggaataatgccg 26927427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 26666011 - 26666212
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||| |||  |||||||||  |  || ||    
T  26666011 cacgtagtggctcgtgctatatgacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggtgggcaggta 26666110  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||| || ||||| || |||||||||    
T  26666111 tgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtg 26666210  T
Q  201 gt 202  Q
    ||    
T  26666211 gt 26666212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 26771982 - 26772183
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||| |||  |||||||||  |  || ||    
T  26771982 cacgtagtggctcgtgctatatgacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggtgggcaggta 26772081  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||| || ||||| || |||||||||    
T  26772082 tgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtg 26772181  T
Q  201 gt 202  Q
    ||    
T  26772182 gt 26772183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 24299135 - 24299285
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  24299135 cacgcagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 24299234  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  24299235 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 24299285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 29508246 - 29508096
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  29508246 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 29508147  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
       ||||||||||||||||||||| ||||||||| |||||| |||||||||    
T  29508146 tgtaacttgctggggatagaatctcggaagactctactgggaataacgccg 29508096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 33369804 - 33369954
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  33369804 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 33369903  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  33369904 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 33369954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 27355457 - 27355658
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||| ||||||| |||||| |||| ||| |||||||||||| ||| ||    
T  27355457 cacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggggacgtatcggagccaaggctgagggcaggtaggta 27355556  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||||||||||||||||  ||||   || ||||| ||||||||| |||||||||| ||||||||||||| || ||||| || |||||||||    
T  27355557 tgcaacttgctggggatagaatcttgagagacctcaccggggaaaacgccgttgtgctgggcatctcagtgctgggtacgttgtagacattgcatctgtg 27355656  T
Q  201 gt 202  Q
    ||    
T  27355657 gt 27355658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 27201022 - 27200859
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||| |||| || |||| |||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  27201022 cacgtagtggctcgagctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 27200923  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||||||||||||||||||||||  |||||  |||||||| ||| ||||| ||||||||||    
T  27200922 tgcaacttgctggggatagaatcttgagagactttactggggaaaacaccgttgtgctgggcat 27200859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 27248211 - 27248374
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||| |||| || |||| |||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  27248211 cacgtagtggctcgagctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 27248310  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||||||||||||||||||||||  |||||  |||||||| ||| ||||| ||||||||||    
T  27248311 tgcaacttgctggggatagaatcttgagagactttactggggaaaacaccgttgtgctgggcat 27248374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 14138775 - 14138925
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  14138775 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 14138874  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||| |||||||||||||||| ||||||||| |||||| |||| ||||    
T  14138875 tgcaactcgctggggatagaatctcggaagactctactgggaataatgccg 14138925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 16756646 - 16756496
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||||||    
T  16756646 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagcta 16756547  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  16756546 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 16756496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 22928229 - 22928431
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||| |||||||||||| || |||||||| |||||||||||||||||||||||  |||||||||| ||| ||||||||||||||||||||| ||||||    
T  22928229 cacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacatcgttgggagatgtatcggaaccatggctgagggcaggtagcta 22928328  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgt-tatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      |||||||||||||||||||||| ||||||||| ||| ||||||| |||||   ||| |||||||||||||| |||| |  ||| ||| |||||||| |    
T  22928329 tgcaacttgctggggatagaatctcggaagactctactagggataatgccgtcgttgccgggcatttcagtgccgggtgtaccgtggatgtcgcatctat 22928428  T
Q  200 ggt 202  Q
    |||    
T  22928429 ggt 22928431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 29556381 - 29556231
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||| |||| |||| |||||||||||||||||| |||||||||||||||||||||||||  |    
T  29556381 cacgtagtggctcgtgctatattacacattcttggaaatcctttttgaagatgacgccgttgggagacgtatcggaaccatggctgagggcagataggca 29556282  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  29556281 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 29556231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 13517568 - 13517731
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||| |||  |||||||||||| ||| ||    
T  13517568 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcgggacctaggctgagggcaggtagata 13517667  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||    
T  13517668 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcat 13517731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 24870533 - 24870395
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||| |||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  24870533 cacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 24870434  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactg 139  Q
      |||||||||||||||||||||| ||||||||| ||||    
T  24870433 tgcaacttgctggggatagaatctcggaagactctactg 24870395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 27209724 - 27209574
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||| ||||  | ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  27209724 cacgtagtggctcgtgctagattacatattccagtaaatcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 27209625  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||||||||||||||||||||||| |||||| |||||| |||| ||||    
T  27209624 tgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 27209574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 27239504 - 27239654
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||| ||||  | ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  27239504 cacgtagtggctcgtgctagattacatattccagtaaatcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 27239603  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||||||||||||||||||||||| |||||| |||||| |||| ||||    
T  27239604 tgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 27239654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 4764587 - 4764442
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||| ||| ||    
T  4764587 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaaccatggctgagggcaggtaggta 4764488  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataa 146  Q
      ||||||||||||||||||||||||  |||||  |||||||||||    
T  4764487 tgcaacttgctggggatagaatcttgagagactttactggggataa 4764442  T

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Target: chr6; HSP #28
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 202
Target Start/End: Complemental strand, 16680980 - 16680783
Alignment:
Q  5 tagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatca 104  Q
    |||||||||||||||  | ||||||||| ||| ||||||| ||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||   |    
T  16680980 tagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgta 16680881  T
Q  105 acttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtggt 202  Q
    |||||||||||||||| |||||  |||||| || ||||| ||||||||| |||||||||||||| |||||||||||| ||||| || |||||||||||    
T  16680880 acttgctggggatagagtcttgagagactccaccggggaaaacgccgttgtgctgggcatttcaatgctgggtatgttgtagacattgcatctgtggt 16680783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 27031846 - 27031701
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||| |||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  27031846 cacgtaatggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagtta 27031747  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataa 146  Q
      ||||||||||||||||| |||| ||||||||| |||||| ||||    
T  27031746 tgcaacttgctggggataggatctcggaagactctactgggaataa 27031701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 26792641 - 26792491
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||  ||| ||||||||||||||  |||||||||||||||||||| ||| ||    
T  26792641 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagacgacgtcgttgggagacgtattggaaccatggctgagggcaggtaggta 26792542  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||||||||||||||||||||||  |||||  ||||||||||| ||||    
T  26792541 tgcaacttgctggggatagaatcttgagagactttactggggataatgccg 26792491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 27014549 - 27014399
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||| ||| ||    
T  27014549 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaaccatggctgagggcaggtaggta 27014450  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      | ||| |||||||||||||||| ||||||||| |||||| |||| ||||    
T  27014449 tgcgactcgctggggatagaatctcggaagactctactgggaataatgccg 27014399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 8899051 - 8899252
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||  | ||||||||| ||| ||||||| ||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||    
T  8899051 cacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggta 8899150  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
       ||||||||||||||||| |||||  |||||| || ||||| |||||| || || ||||||||||||||||||||| || ||||| || |||||||||    
T  8899151 tgtaacttgctggggatagagtcttgagagactccaccggggaaaacgccattgtgttgggcatttcagtgctgggtacgttgtagacattgcatctgtg 8899250  T
Q  201 gt 202  Q
    ||    
T  8899251 gt 8899252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 4532119 - 4531956
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||| |||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||| |||  |||||||||| | ||||||    
T  4532119 cacgtagtggctcgagctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggctggtagcta 4532020  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||||||||||||||||||||||  |||||  ||||||||||| |||||| ||||||||||    
T  4532019 tgcaacttgctggggatagaatcttgagagactttactggggataatgccgttgtgctgggcat 4531956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 16937380 - 16937554
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||| ||| || |||| ||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||    
T  16937380 cacgtagtggctcgtgctatattacacattctcggagattctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggta 16937479  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgg 175  Q
        |||||||||||||||| |||||  |||||| |||||||| ||||||||| |||||||||||||||||||||    
T  16937480 tgtgacttgctggggatagagtcttgagagactccactggggaaaacgccgttgtgctgggcatttcagtgctgg 16937554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 15405905 - 15406050
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| || ||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||||||    
T  15405905 cacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagcta 15406004  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataa 146  Q
      |||||||||||||||||||||| || | |||| |||||| ||||    
T  15406005 tgcaacttgctggggatagaatctcgggaaactctactgggaataa 15406050  T

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Target: chr6; HSP #36
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 15417692 - 15417837
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| || ||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||||||    
T  15417692 cacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagcta 15417791  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataa 146  Q
      |||||||||||||||||||||| || | |||| |||||| ||||    
T  15417792 tgcaacttgctggggatagaatctcgggaaactctactgggaataa 15417837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 26109775 - 26109928
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgtt-gggagacgtaccggaaccatggctgagggcagatagct 99  Q
    |||||||||||||||||||  | |||| |||||||||||||||||||||||| ||| |||| |||||||||| ||||||||||||||||||||| |||||    
T  26109775 cacgtagtggctcgtgctatgttacaccttcttggaaatcctctttggagatgacgtcgtttgggagacgtatcggaaccatggctgagggcaggtagct 26109874  T
Q  100 aatcaacttgctggggatagaatcttggaagactcgactggggataacgccgtt 153  Q
    |  |||||||||||||||||||||| |  |||||  ||||||||||| ||||||    
T  26109875 atgcaacttgctggggatagaatctcgagagactttactggggataatgccgtt 26109928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 27025967 - 27025822
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| || ||||||||||||||||| ||| |||||||||||||| ||| |||| |||||||||| | ||| ||    
T  27025967 cacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacgtatcgggaccaaggctgagggccggtagtta 27025868  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataa 146  Q
      ||||||||||||||||||||||||| |||||| |||||| ||||    
T  27025867 tgcaacttgctggggatagaatcttgggagactctactgggaataa 27025822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 27491964 - 27491800
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||| |||||||||| || |||| |||||||||||||||||||||||| ||| |||||||||||||  ||| ||||||||||||||||| ||| ||    
T  27491964 cacgtagtagctcgtgctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtttcgggaccatggctgagggcaggtaggta 27491865  T
Q  101 atcaacttgc-tggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
    | |||||||| ||||||||||||||||  ||||   || ||||| ||||||||| ||||||||||    
T  27491864 aacaacttgcttggggatagaatcttgagagacctcaccggggaaaacgccgttgtgctgggcat 27491800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 13292319 - 13292470
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatag-ct 99  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| ||||||| |||||| ||| |||| |||||||||| | ||| ||    
T  13292319 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggggacgtatcgggaccaaggctgagggccggtagtct 13292418  T
Q  100 aatcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
    |  ||||||||||||||||||||||||| |||||| |||||| |||| ||||    
T  13292419 atgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 13292470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 28167319 - 28167169
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||| |||  |||||||||| | ||||||    
T  28167319 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggccggtagcta 28167220  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||| |||||| |||||| || ||| |||| ||||    
T  28167219 tgcaacttgctggggatagagtcttgggagactctaccgggaataatgccg 28167169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 20131345 - 20131253
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcag 93  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||    
T  20131345 cacgtagtggctcgtgctatatcacacattcctggaaatcctctttggagatatcgtcgttgggagacgtatcgaaaccatggctgagggcag 20131253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 22201525 - 22201617
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcag 93  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||    
T  22201525 cacgtagtggctcgtgctatatcacacattcctggaaatcctctttggagatatcgtcgttgggagacgtatcgaaaccatggctgagggcag 22201617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 20175387 - 20175335
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagata 53  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  20175387 cacgtagtggctcgtgctacgtcacacattcctgggaatcctctttggagata 20175335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22160604 - 22160656
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagata 53  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  22160604 cacgtagtggctcgtgctacgtcacacattcctgggaatcctctttggagata 22160656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 3e-72; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 29836175 - 29835974
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  29836175 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 29836076  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  29836075 tgcaacttgctggagatagaatcttggaagacccgactggggaaaacgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 29835976  T
Q  201 gt 202  Q
    ||    
T  29835975 gt 29835974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 12086098 - 12086299
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  12086098 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 12086197  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      |||||||||||  || |||||| ||||| ||  |||||||| |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||    
T  12086198 tacaacttgctggaaattgaatctcggaaggctttactggggaaaacgccgttatgctgggcatttcagtgctgggtacgttgtagacatcgcatctgtg 12086297  T
Q  201 gt 202  Q
    ||    
T  12086298 gt 12086299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 28355322 - 28355523
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  28355322 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 28355421  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  28355422 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 28355521  T
Q  201 gt 202  Q
    ||    
T  28355522 gt 28355523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 19681308 - 19681107
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||    
T  19681308 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggta 19681209  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||| || ||||| || |||||||||    
T  19681208 tgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtg 19681109  T
Q  201 gt 202  Q
    ||    
T  19681108 gt 19681107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 31483241 - 31483442
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  31483241 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 31483340  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||| ||||||| |||||||||||||||||||  |||||||| ||||||||| |||||||||||||||| |||||||||| ||||| || |||||||||    
T  31483341 tgcaatttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtactgggtatgttgtagacattgcatctgtg 31483440  T
Q  201 gt 202  Q
    ||    
T  31483441 gt 31483442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 33265572 - 33265371
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||| || ||| ||||||||||||||  |||||||||||||||||||| ||| ||    
T  33265572 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggaaatgacgtcgttgggagacgtattggaaccatggctgagggcaggtaggta 33265473  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||||||||||||||||  |||||  |||||||| ||||||||| ||||||||||||||  ||||||||||| ||||| || |||||||||    
T  33265472 tgcaacttgctggggatagaatcttgagagactttactggggaaaacgccgttgtgctgggcatttcaaagctgggtatgttgtagacattgcatctgtg 33265373  T
Q  201 gt 202  Q
    ||    
T  33265372 gt 33265371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 22074298 - 22074475
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||| ||||||||||||||||| ||||||    
T  22074298 cacgtagtggctcgtgctatatcacacattcttggaaatcctctttggatataacgtcgttgggagacgtatcgggaccatggctgagggcaggtagcta 22074397  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttat-gctgggcatttcagtgctgggt 177  Q
      |||||||||||||||||||||| |||||||||  |||| ||||| ||||| || ||||||||||| |||| |||||    
T  22074398 tgcaacttgctggggatagaatctcggaagactctgctggagataatgccgtcatcgctgggcatttaagtgttgggt 22074475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 31361381 - 31361179
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  31361381 cacgtagtggctcgtgctatattacacattctcggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 31361282  T
Q  101 atcaacttgct-ggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      ||||||||| ||||||| | |||||  |||||| || ||||| ||||||||| ||||||||||||||  ||||||||||| ||||| || ||||||||    
T  31361281 tgcaacttgctgggggataaagtcttgagagactccaccggggaaaacgccgttgtgctgggcatttcaacgctgggtatgttgtagacattgcatctgt 31361182  T
Q  200 ggt 202  Q
    |||    
T  31361181 ggt 31361179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 44567833 - 44567631
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacatt-cttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagct 99  Q
    ||||||| |||||| |||| || ||||||| |||||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||| ||| |||||    
T  44567833 cacgtagcggctcgcgctatattacacatttcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaaccatggctgaggacaggtagct 44567734  T
Q  100 aatcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
    |  |||||||||||  ||||||||||||||||||  |||||||| ||||||||| ||||||||||||||  ||||||||||| ||||| || ||||||||    
T  44567733 atgcaacttgctggaaatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcaaagctgggtatgttgtagacattgcatctgt 44567634  T
Q  200 ggt 202  Q
    |||    
T  44567633 ggt 44567631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 2130654 - 2130804
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  2130654 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcagatagcta 2130753  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  2130754 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 2130804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 19654712 - 19654914
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||| |||||||||||| || |||||||| |||||||||||||||||||||||| ||||||||||| || |||||||||| |||||||||| ||||||    
T  19654712 cacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacttatcggaaccatgactgagggcaggtagcta 19654811  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      |||||||||||||||||||||| ||||| ||| |||||| |||| ||||| | | | |||||||||||||| |||| | |||| ||| ||||||||||    
T  19654812 tgcaacttgctggggatagaatctcggaaggctctactgggaataatgccgtcattaccgggcatttcagtgccgggtgtatcgtggatgtcgcatctgt 19654911  T
Q  200 ggt 202  Q
    |||    
T  19654912 ggt 19654914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 22139740 - 22139538
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||||||| ||||||||||| || |||||||||| |||||||||| ||||||    
T  22139740 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacttatcggaaccatgactgagggcaggtagcta 22139641  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      |||||||||||||| ||||||| ||||||||| ||||||||||| | ||| | | | |||||||||||||| |||| |  ||| ||| ||||||||||    
T  22139640 tacaacttgctggggacagaatctcggaagactctactggggataatgtcgtcattaccgggcatttcagtgccgggtgtaccgtggatgtcgcatctgt 22139541  T
Q  200 ggt 202  Q
    |||    
T  22139540 ggt 22139538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 18716308 - 18716169
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||||||    
T  18716308 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagcta 18716209  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactgg 140  Q
      ||||||||||||||||||||||||| |||||| |||||    
T  18716208 tgcaacttgctggggatagaatcttgggagactctactgg 18716169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 19694942 - 19694767
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||| ||||||||| || || |||||||| |||||||||||||||||||| ||| ||||| |||||||| ||||||||||||||||||||| ||||||    
T  19694942 cacgtaatggctcgtgttatattacacattcctggaaatcctctttggagatgacgtcgttgagagacgtatcggaaccatggctgagggcaggtagcta 19694843  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgg 175  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||| | ||| |||||||||||||||||    
T  19694842 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccgtcattgccgggcatttcagtgctgg 19694767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 15774400 - 15774250
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||| ||    
T  15774400 cacgtagtggctcgtgctacattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtaggta 15774301  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  15774300 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 15774250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 16260764 - 16260562
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||| |||||||||||| || |||||||| |||||||||||||||||||||||| ||||||||||| || |||||||||| |||||||||| ||||||    
T  16260764 cacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacttatcggaaccatgactgagggcaggtagcta 16260665  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      |||||||||||||||||||||| ||||| ||| |||||| |||| ||||| | | | |||||||||||||  |||| | |||| ||| ||||||||||    
T  16260664 tgcaacttgctggggatagaatctcggaaggctctactgggaataatgccgtcattaccgggcatttcagtgtcgggtgtatcgtggatgtcgcatctgt 16260565  T
Q  200 ggt 202  Q
    |||    
T  16260564 ggt 16260562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 33249189 - 33249039
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||| |||| |||||||||| | ||||||    
T  33249189 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcgggaccaaggctgagggccggtagcta 33249090  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||||||||||||| |||||| |||| ||||    
T  33249089 tgcaacttgctggggatagaatcttggaagactctactgggaataatgccg 33249039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 9361455 - 9361255
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||| ||||||| |||||| |||| |||| ||||||||| | ||| ||    
T  9361455 cacgtagtggctcgtgctatattacacattcttgaaaatcctctttggagatgacgtcgttgggggacgtatcgga-ccatagctgagggccggtaggta 9361357  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
       |||| |||||||||||| |||||  |||||| || ||||| ||||||||| ||||||||||||||||||||| || |||||||| || |||||||||    
T  9361356 tgtaactggctggggatagagtcttgagagactccaccggggaaaacgccgttgtgctgggcatttcagtgctggatacgtcgtagacattgcatctgtg 9361257  T
Q  201 gt 202  Q
    ||    
T  9361256 gt 9361255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 146
Target Start/End: Complemental strand, 14569976 - 14569836
Alignment:
Q  6 agtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaa 105  Q
    |||||||||||||| |  ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||  |||    
T  14569976 agtggctcgtgctatactacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaa 14569877  T
Q  106 cttgctggggatagaatcttggaagactcgactggggataa 146  Q
    || |||||||||||||||| ||||||||| |||||| ||||    
T  14569876 ctcgctggggatagaatctcggaagactctactgggaataa 14569836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 19201753 - 19201917
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||  ||||||||||| || |||    
T  19201753 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccacagctgagggcaggtaacta 19201852  T
Q  101 atcaacttgc-tggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
    | |||||||| ||||||||||||||||  |||||| || ||||| ||||||||| ||||||||||    
T  19201853 aacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcat 19201917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 18797535 - 18797385
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  18797535 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 18797436  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||  |||||||||||||| |||||  |||||| |||| ||||    
T  18797435 tgcaacttgctaaggatagaatcttgggagactttactgggaataatgccg 18797385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 151
Target Start/End: Original strand, 27602305 - 27602449
Alignment:
Q  7 gtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaac 106  Q
    ||||||||||||| || ||||||||||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||||||||| ||||||  ||||    
T  27602305 gtggctcgtgctatattacacattcttggaaatcctctttggagctgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaac 27602404  T
Q  107 ttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
    |||||  |||||||||||||| |||||| |||||| |||| ||||    
T  27602405 ttgctaaggatagaatcttgggagactctactgggaataatgccg 27602449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 21341556 - 21341702
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||||||    
T  21341556 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagcta 21341655  T
Q  101 atcaacttgc-tggggatagaatcttggaagactcgactggggataa 146  Q
      |||||||| || ||||||||||| ||||||||| |||||| ||||    
T  21341656 tgcaacttgcttgaggatagaatctcggaagactctactgggaataa 21341702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 6 - 151
Target Start/End: Original strand, 19910558 - 19910703
Alignment:
Q  6 agtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaa 105  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||||||  |||    
T  19910558 agtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaa 19910657  T
Q  106 cttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
    ||||||| ||||||||||| || | |||| |||||| |||| ||||    
T  19910658 cttgctgaggatagaatctcgggaaactctactgggaataatgccg 19910703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 39896916 - 39896715
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  39896916 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 39896817  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      |||||||||||||||||||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||| || || |||||||||||||||    
T  39896816 tgcaacttgctggggatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtggatatcgcatctgtg 39896717  T
Q  201 gt 202  Q
    ||    
T  39896716 gt 39896715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 3789290 - 3789089
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||||||    
T  3789290 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaaccatggctgagggcaggtagcta 3789191  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      || ||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| ||||||||||| ||||| || |||||||||    
T  3789190 tgcatcttgctggggatagaatcttggaagacccgactggggaaaacgccgttgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtg 3789091  T
Q  201 gt 202  Q
    ||    
T  3789090 gt 3789089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 13930006 - 13930207
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  13930006 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 13930105  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
    | ||||||||||| ||||||||||||| ||||  ||||||||| ||||||||| ||||||||||||||||| ||||||||| ||||| || |||||||||    
T  13930106 aacaacttgctggagatagaatcttgggagacctgactggggagaacgccgttgtgctgggcatttcagtgttgggtatgttgtagacattgcatctgtg 13930205  T
Q  201 gt 202  Q
    ||    
T  13930206 gt 13930207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 19409879 - 19410080
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  19409879 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 19409978  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      || ||||||||||||||||||||||||||| | |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  19409979 tgcatcttgctggggatagaatcttggaagaccccactggggaaaacgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 19410078  T
Q  201 gt 202  Q
    ||    
T  19410079 gt 19410080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 37932224 - 37932023
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||||||    
T  37932224 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaaccatggctgagggcaggtagcta 37932125  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      || ||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| ||||||||||| ||||| || |||||||||    
T  37932124 tgcatcttgctggggatagaatcttggaagacccgactggggaaaacgccgttgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtg 37932025  T
Q  201 gt 202  Q
    ||    
T  37932024 gt 37932023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 34297996 - 34297795
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  34297996 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 34297897  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      |||||||||||||||||||||| ||||||||| |||||| | || |||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  34297896 tgcaacttgctggggatagaatctcggaagactctactgggaaaaatgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 34297797  T
Q  201 gt 202  Q
    ||    
T  34297796 gt 34297795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 16822733 - 16822934
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||||||    
T  16822733 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagcta 16822832  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      || ||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||| ||||||||||| ||||| || |||||||||    
T  16822833 tgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgttgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtg 16822932  T
Q  201 gt 202  Q
    ||    
T  16822933 gt 16822934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 16898747 - 16898546
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||||||    
T  16898747 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagcta 16898648  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      || ||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||| ||||||||||| ||||| || |||||||||    
T  16898647 tgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgttgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtg 16898548  T
Q  201 gt 202  Q
    ||    
T  16898547 gt 16898546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 21670568 - 21670769
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  21670568 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 21670667  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||||||||  ||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  21670668 tgcaacttgctggagatagaatcttggaagacctgactggggaaaacgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 21670767  T
Q  201 gt 202  Q
    ||    
T  21670768 gt 21670769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 11628580 - 11628781
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||| ||    
T  11628580 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtaggta 11628679  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||||||||||||||||  |||||| || ||||| ||||||||| |||| ||||||||||||||||||| |||||||| || |||||||||    
T  11628680 tgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgttgtgctaggcatttcagtgctgggtaagtcgtagacattgcatctgtg 11628779  T
Q  201 gt 202  Q
    ||    
T  11628780 gt 11628781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 16168325 - 16168124
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  16168325 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 16168226  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  16168225 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 16168126  T
Q  201 gt 202  Q
    ||    
T  16168125 gt 16168124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 27397182 - 27397005
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  27397182 cacgtagtggctcgtgctatatcacacattcttggaaatcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 27397083  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttat-gctgggcatttcagtgctgggt 177  Q
      |||||||||||||||||||||| |||||||||  |||||||||| ||||| || |||||||||||||||| |||||    
T  27397082 tgcaacttgctggggatagaatctcggaagactccgctggggataatgccgtcatcgctgggcatttcagtgttgggt 27397005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 27810550 - 27810349
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  27810550 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 27810451  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  27810450 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 27810351  T
Q  201 gt 202  Q
    ||    
T  27810350 gt 27810349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 32056599 - 32056398
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||| ||  ||||||||| ||||||||||| ||||||    
T  32056599 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagatgtgtcggaaccatagctgagggcaggtagcta 32056500  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      || ||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||| ||||||||||| ||||| || |||||||||    
T  32056499 tgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgttgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtg 32056400  T
Q  201 gt 202  Q
    ||    
T  32056399 gt 32056398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 21696584 - 21696786
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  21696584 cacgtagtggctcgtgcaatattacacattcctggaaatcctctttggagataacgccgttgggagacgtatcggaaccatggctgagggcaggtagcta 21696683  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      |||||||||||||||||||||| ||||| ||| ||||||||||| ||||| | ||||||||||||||||||||||| |   || ||| ||||||||||    
T  21696684 tgcaacttgctggggatagaatctcggaaggctctactggggataatgccgtcattgctgggcatttcagtgctgggtgtactgtggatgtcgcatctgt 21696783  T
Q  200 ggt 202  Q
    |||    
T  21696784 ggt 21696786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 254047 - 254248
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  254047 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 254146  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| |||||| |||||||||||||||||||| ||||| || |||||||||    
T  254147 tacaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctggacatttcagtgctgggtatgttgtagacattgcatctgtg 254246  T
Q  201 gt 202  Q
    ||    
T  254247 gt 254248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 9343382 - 9343583
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||| ||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  9343382 cacgtagtgactcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 9343481  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  9343482 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 9343581  T
Q  201 gt 202  Q
    ||    
T  9343582 gt 9343583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 22921539 - 22921740
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  22921539 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 22921638  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||  || ||| |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  22921639 tgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 22921738  T
Q  201 gt 202  Q
    ||    
T  22921739 gt 22921740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 34868481 - 34868280
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||    
T  34868481 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggta 34868382  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||| || ||||| || |||||||||    
T  34868381 tgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtg 34868282  T
Q  201 gt 202  Q
    ||    
T  34868281 gt 34868280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 37679293 - 37679494
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||| ||| ||||||| ||||||| ||| |||||||||||||| ||||||||| ||||||||||| ||| ||    
T  37679293 cacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaaccatagctgagggcaggtagata 37679392  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  37679393 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 37679492  T
Q  201 gt 202  Q
    ||    
T  37679493 gt 37679494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 37694558 - 37694759
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||| ||| ||||||| ||||||| ||| |||||||||||||| ||||||||| ||||||||||| ||| ||    
T  37694558 cacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaaccatagctgagggcaggtagata 37694657  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  37694658 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 37694757  T
Q  201 gt 202  Q
    ||    
T  37694758 gt 37694759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 37945260 - 37945461
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||| ||  ||||||||| ||||||||||| ||| ||    
T  37945260 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagatgtgtcggaaccatagctgagggcaggtagata 37945359  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||||||||| ||||||||| ||||| || |||||||||    
T  37945360 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgttgggtatgttgtagacattgcatctgtg 37945459  T
Q  201 gt 202  Q
    ||    
T  37945460 gt 37945461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 34268318 - 34268520
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||  | |||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  34268318 cacgtagtggctcgtgctatgttacacattcctggaaatcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 34268417  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      |||||||||||||||||||||| ||||||||| ||||||||||| || || | ||| | ||||||||||||||||| |  ||| ||| ||||| ||||    
T  34268418 tgcaacttgctggggatagaatctcggaagactctactggggataatgctgtcattgccgagcatttcagtgctgggtgtaccgtggatgtcgcacctgt 34268517  T
Q  200 ggt 202  Q
    |||    
T  34268518 ggt 34268520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 12593661 - 12593460
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||  | ||||||||| ||| ||||||| ||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||    
T  12593661 cacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggta 12593562  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  12593561 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 12593462  T
Q  201 gt 202  Q
    ||    
T  12593461 gt 12593460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 39045277 - 39045479
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  39045277 cacgtagtggctcgtgctatgttacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 39045376  T
Q  101 atcaac-ttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      |||| ||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||| ||||||||| ||||| ||||| || ||||||||    
T  39045377 tgcaactttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcattccagtgctggatatgttgtagacattgcatctgt 39045476  T
Q  200 ggt 202  Q
    |||    
T  39045477 ggt 39045479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 27783070 - 27782869
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||||| | | |||||| ||||||| |||||||||||| |||||| | ||| ||    
T  27783070 cacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgatgtcgttggtagacgtatcggaaccatggccgagggccggtaggta 27782971  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
       |||||||||||||||||||||||  |||||| |||||| | ||||||||| |||||||||||||||| |||||||||| ||||| || |||||| ||    
T  27782970 tgtaacttgctggggatagaatcttgagagactccactgggaaaaacgccgttgtgctgggcatttcagtactgggtatgttgtagacattgcatctatg 27782871  T
Q  201 gt 202  Q
    ||    
T  27782870 gt 27782869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 19449807 - 19450010
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagc-t 99  Q
    |||||||||||||| |||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| | |||| |    
T  19449807 cacgtagtggctcgcgctatatcacacattcttagaaatcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcgggtagcat 19449906  T
Q  100 aatcaacttgctggggatagaatcttggaagactcgactggggataacgccgttat-gctgggcatttcagtgctgggtatgtcgtagatatcgcatctg 198  Q
    |  |||||||||||||||||||||| |||||||||  |||| |||||  |||| || |||||||||||||||| ||||| |   || ||| |||||||||    
T  19449907 atgcaacttgctggggatagaatctcggaagactccgctggagataataccgtcatcgctgggcatttcagtgttgggtgtactgtggatgtcgcatctg 19450006  T
Q  199 tggt 202  Q
    ||||    
T  19450007 tggt 19450010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 23117621 - 23117471
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| ||||||||| |||| ||||||||||||||||||||| ||||||    
T  23117621 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggaggcgtatcggaaccatggctgagggcaggtagcta 23117522  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||||||||||||||||||||||| |||||| |||||| |||| ||||    
T  23117521 tgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 23117471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 31883118 - 31882955
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||| |||||||||||| ||| ||    
T  31883118 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaaccaaggctgagggcaggtaggta 31883019  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||||||||| |||||||||||||||||||  || ||||| || |||||| ||||||||||    
T  31883018 tgcaacttgctggagatagaatcttggaagactttaccggggacaatgccgttgtgctgggcat 31882955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 20844740 - 20844590
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||| |||||||||||| || |||||||| |||||||| ||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  20844740 cacgtaatggctcgtgctatattacacattcctggaaatcatctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 20844641  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  20844640 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 20844590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 40240370 - 40240169
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||  | ||||||||| ||| ||||||| ||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||    
T  40240370 cacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggta 40240271  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
       ||||||||||||||||| |||||  | |||| || ||||| ||||||||| |||||||||||||| |||||||||||| ||||| || |||||||||    
T  40240270 tgtaacttgctggggatagagtcttgagacactccaccggggaaaacgccgttgtgctgggcatttcaatgctgggtatgttgtagacattgcatctgtg 40240171  T
Q  201 gt 202  Q
    ||    
T  40240170 gt 40240169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 28889076 - 28888929
Alignment:
Q  4 gtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatc 103  Q
    |||||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||||||  |    
T  28889076 gtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgc 28888977  T
Q  104 aacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
    ||||||||||||||||||||| || |||||| |||||| |||| ||||    
T  28888976 aacttgctggggatagaatctcgggagactctactgggaataatgccg 28888929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 12710019 - 12710169
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||| ||| ||    
T  12710019 cacgtagtggcccgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaaccatggctgagggcaggtaggta 12710118  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      | ||||||||||||||||||||||  |||||  ||||||||||| ||||    
T  12710119 tgccacttgctggggatagaatcttgagagactttactggggataatgccg 12710169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 37384502 - 37384364
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||||||||| || ||| ||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  37384502 cacgtagtggctcgtgctatattacacattcttggaattcttctgtggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 37384403  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactg 139  Q
      |||||||||||||||||||||| ||||||||| ||||    
T  37384402 tgcaacttgctggggatagaatctcggaagactctactg 37384364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 27123347 - 27123208
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||| |||  |||||||||| | ||||||    
T  27123347 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggccggtagcta 27123248  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactgg 140  Q
      ||||||||||||||||||||||||| |||||| |||||    
T  27123247 tgcaacttgctggggatagaatcttgggagactctactgg 27123208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 27427868 - 27428019
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||| |||||||||||| || |||||||| ||||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||||||| |||||     
T  27427868 cacgtaatggctcgtgctatattacacattcctggaaatcctccttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctt 27427967  T
Q  101 at-caacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
    || |||||||||||||| ||||||| ||||||||  |||||| |||| ||||    
T  27427968 atgcaacttgctggggacagaatctcggaagactatactgggaataatgccg 27428019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 34161688 - 34161525
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||| ||| |||||||||||||| | || ||| |||||||||| | ||| ||    
T  34161688 cacgtagtggctcgtgctatgttacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagagccaaggctgagggctggtaggta 34161589  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||||||||||||||||||||||  |||||| || ||||| ||||||||| || |||||||    
T  34161588 tgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgttgtgttgggcat 34161525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 12662316 - 12662165
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||| |||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||| ||    
T  12662316 cacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtaggta 12662217  T
Q  101 atcaacttgc-tggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||| || ||||||||||| ||||||||| |||||| |||| ||||    
T  12662216 tgcaacttgcttgaggatagaatctcggaagactctactgggaataatgccg 12662165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 31868204 - 31868354
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||| |||  |||||||||| | ||| ||    
T  31868204 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcgggacctaggctgagggccggtaggta 31868303  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
       |||||| |||||||||||||| ||||||||| |||||| |||| ||||    
T  31868304 tgaaacttgatggggatagaatctcggaagactctactgggaataatgccg 31868354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 7e-70; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 15752165 - 15752366
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  15752165 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 15752264  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      || ||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| ||||||||||| ||||| || |||||||||    
T  15752265 tgcatcttgctggggatagaatcttggaagacccgactggggaaaacgccgttgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtg 15752364  T
Q  201 gt 202  Q
    ||    
T  15752365 gt 15752366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 30036280 - 30036079
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  30036280 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 30036181  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      || ||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| ||||||||||| ||||| || |||||||||    
T  30036180 tgcatcttgctggggatagaatcttggaagacccgactggggaaaacgccgttgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtg 30036081  T
Q  201 gt 202  Q
    ||    
T  30036080 gt 30036079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 37761828 - 37761627
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||||||||||||||||||| |||| ||| |||||||||||||| ||||||||||||||||||||| |||||     
T  37761828 cacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctg 37761729  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||||  |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  37761728 tgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 37761629  T
Q  201 gt 202  Q
    ||    
T  37761628 gt 37761627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 33523238 - 33523037
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||||||    
T  33523238 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagcta 33523139  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      || ||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||| ||||||||||| ||||| || |||||||||    
T  33523138 tgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgttgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtg 33523039  T
Q  201 gt 202  Q
    ||    
T  33523038 gt 33523037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 40466856 - 40467057
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  40466856 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 40466955  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  40466956 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 40467055  T
Q  201 gt 202  Q
    ||    
T  40467056 gt 40467057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 3796387 - 3796186
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||    
T  3796387 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggta 3796288  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||||  |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| ||  ||||||||    
T  3796287 tgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgctgggtatgttgtagacatttcatctgtg 3796188  T
Q  201 gt 202  Q
    ||    
T  3796187 gt 3796186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 13318133 - 13318334
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||| |||  ||||||||||||  || ||    
T  13318133 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggcaggcaggta 13318232  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||| || ||||||||||||||||||    
T  13318233 tgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtagatatcgcatctgtg 13318332  T
Q  201 gt 202  Q
    ||    
T  13318333 gt 13318334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 22895261 - 22895059
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  22895261 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcagatagcta 22895162  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      |||||||||||||||||||||| ||||||||| ||||||||| | ||| | | || |||||||||||||||||||| |   || ||||| ||||||||    
T  22895161 tgcaacttgctggggatagaatctcggaagactctactggggatgatgccatcattgttgggcatttcagtgctgggtgtactgtggatattgcatctgt 22895062  T
Q  200 ggt 202  Q
    |||    
T  22895061 ggt 22895059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 5 - 202
Target Start/End: Original strand, 18494079 - 18494276
Alignment:
Q  5 tagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatca 104  Q
    |||||||||||||||  | ||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||   ||||||  ||    
T  18494079 tagtggctcgtgctatgttacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggccagtagctatgca 18494178  T
Q  105 acttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtggt 202  Q
    ||||||||||||||||||||||| |||||| || ||||| ||||||||| ||||| |||||||| |||||||||||| ||||| || |||||||||||    
T  18494179 acttgctggggatagaatcttgggagactctaccggggaaaacgccgttgtgctgagcatttcaatgctgggtatgttgtagacattgcatctgtggt 18494276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 30175322 - 30175121
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  30175322 cacgtagtggctcgtgctatattacacattcttggaaatcttctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 30175223  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||  || ||| |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  30175222 tgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 30175123  T
Q  201 gt 202  Q
    ||    
T  30175122 gt 30175121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 32589582 - 32589783
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||| ||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  32589582 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 32589681  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||| ||||  ||||||||| ||||||||| ||||||||||||||| ||||||||||| ||||| || |||||||||    
T  32589682 tacaacttgctggagatagaatcttgggagacctgactggggagaacgccgttgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtg 32589781  T
Q  201 gt 202  Q
    ||    
T  32589782 gt 32589783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 6881147 - 6880984
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  6881147 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 6881048  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      |||||||||||||||||||||| ||||||||| |||||| ||||||||||| ||||||||||    
T  6881047 tgcaacttgctggggatagaatctcggaagactctactgggaataacgccgttgtgctgggcat 6880984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 23898730 - 23898527
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||| |||||||||||| || |||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  23898730 cacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 23898631  T
Q  101 atcaacttgc-tggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgtcgtagatatcgcatctg 198  Q
      |||||||| |||||||||||||| ||||||||| ||||||||||| ||||| | ||| |||||||||||||| |||| |  ||| ||| |||||||||    
T  23898630 tgcaacttgcttggggatagaatctcggaagactctactggggataatgccgtcattgccgggcatttcagtgccgggtgtaccgtggatgtcgcatctg 23898531  T
Q  199 tggt 202  Q
    ||||    
T  23898530 tggt 23898527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 11330488 - 11330287
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||| ||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||    
T  11330488 cacgtagcggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggta 11330389  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
       ||||||||||||||||| |||||  ||||  ||||||||| || |||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  11330388 tgtaacttgctggggatagagtcttgagagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 11330289  T
Q  201 gt 202  Q
    ||    
T  11330288 gt 11330287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 31819732 - 31819891
Alignment:
Q  5 tagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatca 104  Q
    ||||||||| ||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||  ||    
T  31819732 tagtggctcatgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgca 31819831  T
Q  105 acttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
    ||||||||| |||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  31819832 acttgctggagatagaatcttggaagacccgactggggaaaacgccgttgtgctgggcat 31819891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 37351971 - 37352134
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  37351971 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 37352070  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      |||||||||||||||||||||| |  |||||  ||||||||||| |||||| ||||||||||    
T  37352071 tgcaacttgctggggatagaatctcgagagactttactggggataatgccgttgtgctgggcat 37352134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 5644654 - 5644453
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  5644654 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 5644555  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||  || |||||||||  || ||| |||||||| ||||||||| ||||||||||||||| |||||||| || ||||| || |||||||||    
T  5644554 tgcaacttgctgtagacagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagcgctgggtacgttgtagacattgcatctgtg 5644455  T
Q  201 gt 202  Q
    ||    
T  5644454 gt 5644453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 13435976 - 13436177
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| | |||||||||||| | || ||| |||||||||| | ||| ||    
T  13435976 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcattgggagacgtatcagagccaaggctgagggctggtaggta 13436075  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||||||||||||||||  |||||| || ||||| ||||||||| ||||||||||||||| | ||||||||| ||||| || |||||||||    
T  13436076 tgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcatttcagcgttgggtatgttgtagacattgcatctgtg 13436175  T
Q  201 gt 202  Q
    ||    
T  13436176 gt 13436177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 28656099 - 28655898
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||  | ||||||||||||||||| ||||||||||| ||| |||||||||||||| ||||  || |||||||||||| ||| ||    
T  28656099 cacgtagtggctcgtgctatgttacacattcttggaaatcttctttggagatgacgtcgttgggagacgtatcggagtcaaggctgagggcaggtaggta 28656000  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      || |||||||||||||||||||||  |||||| || ||||| ||||||||| |||||||||||||||||||||||| || ||||| || |||||||||    
T  28655999 tgcaccttgctggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtg 28655900  T
Q  201 gt 202  Q
    ||    
T  28655899 gt 28655898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 9324318 - 9324154
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| || |||    
T  9324318 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaacta 9324219  T
Q  101 atcaacttgc-tggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
    | |||||||| ||||||||||||||||  |||||| || ||||| ||||||||| ||||||||||    
T  9324218 aacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcat 9324154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 26487228 - 26487064
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| || |||    
T  26487228 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaacta 26487129  T
Q  101 atcaacttgc-tggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
    | |||||||| ||||||||||||||||  |||||| || ||||| ||||||||| ||||||||||    
T  26487128 aacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcat 26487064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 12139016 - 12138853
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||    
T  12139016 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggta 12138917  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||||||||| |||||||||||||||||||  |||||||| ||||||||| ||||||||||    
T  12138916 tgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcat 12138853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 23632798 - 23632659
Alignment:
Q  7 gtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaac 106  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||||||||||  ||||    
T  23632798 gtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcagatagctatgcaac 23632699  T
Q  107 ttgctggggatagaatcttggaagactcgactggggataa 146  Q
    |||||||||||||||||| ||||||||| |||||| ||||    
T  23632698 ttgctggggatagaatctcggaagactctactgggaataa 23632659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 37745656 - 37745819
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||| |||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  37745656 cacgtagtggctcgtgctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 37745755  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||| ||||||||||||||||||  |||||  |||||||| ||| ||||| ||||||||||    
T  37745756 tgcaactcgctggggatagaatcttgagagactttactggggaaaacaccgttgtgctgggcat 37745819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 9544035 - 9544185
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  9544035 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 9544134  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||| |||||||||||||||| ||||||||| |||||| |||| ||||    
T  9544135 tgcaactcgctggggatagaatctcggaagactctactgggaataatgccg 9544185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 23727071 - 23726921
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||||||    
T  23727071 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagcta 23726972  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| || |||||| |||||| |||| ||||    
T  23726971 tgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 23726921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 25207143 - 25206941
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| ||| |||||||||| | |||||| |||||||||||| ||||||    
T  25207143 cacgtagtggctcgtgctacattacacattcctgggaatcctctttggagataacgtcgtcgggagacgtatcagaaccagggctgagggcaggtagcta 25207044  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      |||||||||||||||||||||| ||||||||| |||| |||||| | ||| | ||| |||||||||| ||| |||| |  ||| ||| ||||||||||    
T  25207043 tgcaacttgctggggatagaatctcggaagactctactgaggataatgtcgtcactgccgggcatttcaatgccgggtgtaccgtggatgtcgcatctgt 25206944  T
Q  200 ggt 202  Q
    |||    
T  25206943 ggt 25206941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 25271299 - 25271097
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| ||| |||||||||| | |||||| |||||||||||| ||||||    
T  25271299 cacgtagtggctcgtgctacattacacattcctgggaatcctctttggagataacgtcgtcgggagacgtatcagaaccagggctgagggcaggtagcta 25271200  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      |||||||||||||||||||||| ||||||||| |||| |||||| | ||| | ||| |||||||||| ||| |||| |  ||| ||| ||||||||||    
T  25271199 tgcaacttgctggggatagaatctcggaagactctactgaggataatgtcgtcactgccgggcatttcaatgccgggtgtaccgtggatgtcgcatctgt 25271100  T
Q  200 ggt 202  Q
    |||    
T  25271099 ggt 25271097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 18368837 - 18369038
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||| ||| || |||| ||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||    
T  18368837 cacgtagtggctcgtgctatattacacattctcggagattctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggta 18368936  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
       |||||||||||||||||  ||||  |||||| |||||||| ||||||||| ||||||||||||||||||||| ||||| ||||| || |||||||||    
T  18368937 tgtaacttgctggggatagagccttgagagactccactggggaaaacgccgttgtgctgggcatttcagtgctggatatgttgtagacattgcatctgtg 18369036  T
Q  201 gt 202  Q
    ||    
T  18369037 gt 18369038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 22992448 - 22992593
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||||||    
T  22992448 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagcta 22992547  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataa 146  Q
      |||||||||||||||||||||| || |||||| |||||| ||||    
T  22992548 tgcaacttgctggggatagaatctcgggagactctactgggaataa 22992593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 28953102 - 28953265
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||| ||||||| ||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||||||    
T  28953102 cacgtagtggctcgtgctatattacatattcttgaaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagcta 28953201  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      || ||||||||||| ||||||| ||||||||  |||||||| ||||||||| ||||||||||    
T  28953202 tgcatcttgctggggacagaatctcggaagactttactggggaaaacgccgttgtgctgggcat 28953265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 30158874 - 30158711
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||| ||||||||  || ||| ||    
T  30158874 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaaccaaggctgaggataggtaggta 30158775  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||||||||| ||||||||||||||||||| ||||||||| || |||||| ||||||||||    
T  30158774 tgcaacttgctggagatagaatcttggaagacttgactggggaaaatgccgttgtgctgggcat 30158711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 33881960 - 33881797
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||| |||  |||||||||||| ||| ||    
T  33881960 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcgggacctaggctgagggcaggtagata 33881861  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||    
T  33881860 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcat 33881797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 34623353 - 34623190
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| |||| ||| ||||| |||||| ||| ||    
T  34623353 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgggggcaggtaggta 34623254  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||||||||||||||||||||||  |||||| || ||||| ||||||||| ||||||||||    
T  34623253 tgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcat 34623190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 24976678 - 24976528
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||| |||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  24976678 cacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagtta 24976579  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  24976578 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 24976528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 43085081 - 43084907
Alignment:
Q  28 attcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttgg 127  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||   ||||||||||||||||| |||||     
T  43085081 attcttggaaatcctctctggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggatagagtcttga 43084982  T
Q  128 aagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtggt 202  Q
     |||||| || ||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||||    
T  43084981 gagactccaccggggaaaacgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtggt 43084907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 8658800 - 8658962
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| || ||||||||||| ||||||||||||||||||||| ||||||    
T  8658800 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgctgggagacgtatcggaaccatggctgagggcaggtagcta 8658899  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      |||||||||||  ||||||||| ||||||||  ||| |||| || |||||| ||||||||||    
T  8658900 tgcaacttgctggaaatagaatctcggaagactttact-gggaaaatgccgttgtgctgggcat 8658962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 2517899 - 2517749
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||  || ||    
T  2517899 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtaccggagccacggctgagggcaggcaggta 2517800  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||||||||| |||||||||||| ||||||  ||||||||||| ||||    
T  2517799 tgcaacttgctggagatagaatcttgaaagactttactggggataatgccg 2517749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 24609079 - 24608929
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||| |||||||||||| || |||||||| |||||||||||||||||||| ||| ||||| |||||||| ||||||||||||||||||||| ||| ||    
T  24609079 cacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgagagacgtatcggaaccatggctgagggcaggtagtta 24608980  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  24608979 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 24608929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 31438291 - 31438141
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||| ||  ||    
T  31438291 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaaccatggctgagggcaggtaagta 31438192  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||||||||||||||||||||||  |||||  ||||||||||| ||||    
T  31438191 tgcaacttgctggggatagaatcttgagagactttactggggataatgccg 31438141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 18121741 - 18121886
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||||||||||| ||| |||||||||||||  |||||||| |||||||||||| ||||||    
T  18121741 cacgtagtggctcgtgctatatcacgcattcctggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccaaggctgagggcaggtagcta 18121840  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataa 146  Q
      |||||||||||||||||||||| || |||||| |||||| ||||    
T  18121841 tgcaacttgctggggatagaatctcgggagactctactgggaataa 18121886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 151
Target Start/End: Complemental strand, 30941459 - 30941314
Alignment:
Q  6 agtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaa 105  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||||||  |||    
T  30941459 agtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaa 30941360  T
Q  106 cttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
    ||||||| ||||||||||| || |||||| |||||| |||| ||||    
T  30941359 cttgctgaggatagaatctcgggagactctactgggaataatgccg 30941314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 15652068 - 15652218
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| | | |||||||||||||  || ||||| |||||||||||| ||||||    
T  15652068 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgatgtcgttgggagacgtgtcgaaaccaaggctgagggcaggtagcta 15652167  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| || |||||| |||||| |||| ||||    
T  15652168 tgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 15652218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 24730803 - 24730653
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||| ||| ||    
T  24730803 cacgtagtggcccgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaaccatggctgagggcaggtaggta 24730704  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      | ||||||||||||||||||||||  |||||  ||||||||||| ||||    
T  24730703 tgccacttgctggggatagaatcttgagagactttactggggataatgccg 24730653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 41681541 - 41681401
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaa--tcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagc 98  Q
    ||||||||||||||||||| || |||||||||||||||  |||||||||||||| ||| |||||||||||||  |||||||||| |||||||||| || |    
T  41681541 cacgtagtggctcgtgctatattacacattcttggaaaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatgactgagggcaggtaac 41681442  T
Q  99 taatcaacttgctggggatagaatcttggaagactcgactg 139  Q
    ||  |||||||||||||||||||||| ||||||||| ||||    
T  41681441 tatgcaacttgctggggatagaatctcggaagactctactg 41681401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 37664811 - 37664961
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  |||||||| |||||||||  |  || ||    
T  37664811 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaaccaaggctgagggtgggcaggta 37664910  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||||||||| |||||||||||| ||||||  |||||||| |||||||    
T  37664911 tgcaacttgctggagatagaatcttgaaagactttactggggaaaacgccg 37664961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 11556188 - 11556043
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || || ||||| |||||||||||||||||||| ||| |||||||||||||| ||| |||  |||||||||| | ||||||    
T  11556188 cacgtagtggctcgtgctatattacgcattcctggaaatcctctttggagatgacgtcgttgggagacgtatcgggacctaggctgagggccggtagcta 11556089  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataa 146  Q
      |||||||||||||||||| |||||| |||||| |||||| ||||    
T  11556088 tgcaacttgctggggatagagtcttgggagactctactgggaataa 11556043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 33299370 - 33299220
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||| |||  ||| |||||| | ||||||    
T  33299370 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcgggacctaggcggagggccggtagcta 33299271  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||| | || |||||| |||||| |||| ||||    
T  33299270 tgcaacttgctggggatagaatatcgggagactctactgggaataatgccg 33299220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 13180124 - 13180241
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||| ||    
T  13180124 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtaggta 13180223  T
Q  101 atcaacttgctggggata 118  Q
      ||||| ||||||||||    
T  13180224 tgcaactcgctggggata 13180241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 33784316 - 33784166
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || || ||||| |||||||||||||||||||| ||| |||||||||||||| ||| |||   | ||||||| | ||||||    
T  33784316 cacgtagtggctcgtgctatattacgcattcctggaaatcctctttggagatgacgtcgttgggagacgtatcgggacctaagttgagggccggtagcta 33784217  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| || |||||| |||||| |||| ||||    
T  33784216 tgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 33784166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 7e-70; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 24334987 - 24334786
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  24334987 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 24334888  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      || ||||||||||||||||||||||||||| | |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  24334887 tgcatcttgctggggatagaatcttggaagaccccactggggaaaacgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 24334788  T
Q  201 gt 202  Q
    ||    
T  24334787 gt 24334786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 10649881 - 10649681
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||| ||    
T  10649881 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaaccatggctgagggcaggtaggta 10649782  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      |||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  10649781 tgcaacttgctggggatagaatcttggaagact-tactggggaaaacgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 10649683  T
Q  201 gt 202  Q
    ||    
T  10649682 gt 10649681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 6536191 - 6536392
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||||||||||||||||||| |||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  6536191 cacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 6536290  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||||  |||||||| ||||||||| |||||||||||||||| ||||||| || || || ||||||||||||    
T  6536291 tgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtactgggtacgttgtggacatcgcatctgtg 6536390  T
Q  201 gt 202  Q
    ||    
T  6536391 gt 6536392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 17978399 - 17978600
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||||||    
T  17978399 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagcta 17978498  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      || ||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||| ||||||||||| ||||| || |||||||||    
T  17978499 tgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgttgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtg 17978598  T
Q  201 gt 202  Q
    ||    
T  17978599 gt 17978600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 18232003 - 18231802
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||||||    
T  18232003 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagcta 18231904  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      || ||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||| ||||||||||| ||||| || |||||||||    
T  18231903 tgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgttgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtg 18231804  T
Q  201 gt 202  Q
    ||    
T  18231803 gt 18231802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 47030267 - 47030066
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||||||||||||||||||| |||| ||| |||||||||||| | ||||||||||||||||||||| ||||||    
T  47030267 cacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgcatcggaaccatggctgagggcaggtagcta 47030168  T
Q  101 atcaac-ttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      |||| ||||||| |||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||||||||||||||| ||||| || ||||||||    
T  47030167 tgcaactttgctggagatagaatcttggaagactccactggggaaaacgccgttgtgctgggca-ttcagtgctgggtatgttgtagacattgcatctgt 47030069  T
Q  200 ggt 202  Q
    |||    
T  47030068 ggt 47030066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 5602761 - 5602962
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  5602761 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 5602860  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||  || ||| |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  5602861 tgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 5602960  T
Q  201 gt 202  Q
    ||    
T  5602961 gt 5602962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 51788833 - 51788632
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||    
T  51788833 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggta 51788734  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||| || ||||| || |||||||||    
T  51788733 tgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtg 51788634  T
Q  201 gt 202  Q
    ||    
T  51788633 gt 51788632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 5020522 - 5020321
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||||||||| ||| ||    
T  5020522 cacgtagtggctcgtgctatattacacattctcggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatagctgagggcaggtagata 5020423  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||||||||||||||||  |||||  |||||||| ||||||||| ||||||||||||||  ||||||||||| ||||| || |||||||||    
T  5020422 tgcaacttgctggggatagaatcttgagagactttactggggaaaacgccgttgtgctgggcatttcaaagctgggtatgttgtagacattgcatctgtg 5020323  T
Q  201 gt 202  Q
    ||    
T  5020322 gt 5020321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 28345982 - 28345781
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||| |||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  28345982 cacgtagtggctcgtgctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 28345883  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||  || ||| |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  28345882 tgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 28345783  T
Q  201 gt 202  Q
    ||    
T  28345782 gt 28345781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 29658415 - 29658616
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||| ||| |||||||||||||   |||||||| ||||||||||| ||| ||    
T  29658415 cacgtagtggctcgtgctatgttacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgttggaaccatagctgagggcaggtagata 29658514  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  29658515 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 29658614  T
Q  201 gt 202  Q
    ||    
T  29658615 gt 29658616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 20570304 - 20570505
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||| |||| | | ||| ||    
T  20570304 cacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgaggaccggtaggta 20570403  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
       |||||||||||||||||||||||  |||||| |||||||| ||||||||| |||||||||||||||| |||||||||| ||||| || |||||||||    
T  20570404 tgtaacttgctggggatagaatcttgagagactccactggggaaaacgccgttgtgctgggcatttcagtactgggtatgttgtagacattgcatctgtg 20570503  T
Q  201 gt 202  Q
    ||    
T  20570504 gt 20570505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 31957904 - 31958105
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| |||  ||||||||||||  ||||||||| ||||||||||| ||| ||    
T  31957904 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgttgttgggagacgtgtcggaaccatagctgagggcaggtagata 31958003  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||  || ||| |||||||| ||| ||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  31958004 tgcaacttgctggagatagaatcttgagaggctccactggggaaaacaccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 31958103  T
Q  201 gt 202  Q
    ||    
T  31958104 gt 31958105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 28109411 - 28109575
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  28109411 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 28109510  T
Q  101 atcaacttgctggggatagaatcttggaagactc-gactggggataacgccgttatgctgggcat 164  Q
    | ||||||||||| ||||||||||||||| || | ||||||||| ||||||||| ||||||||||    
T  28109511 aacaacttgctggagatagaatcttggaaaaccctgactggggaaaacgccgttgtgctgggcat 28109575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 4690464 - 4690262
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||||||    
T  4690464 cacgcagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagcta 4690365  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      |||||||||||||||||||||| || |||||| |||||| |||| ||||| | |||||||||||||||||| || | | |||| ||| ||||||||||    
T  4690364 tgcaacttgctggggatagaatctcgggagactctactgggaataatgccgtcattgctgggcatttcagtgccggatgtatcgtggatgtcgcatctgt 4690265  T
Q  200 ggt 202  Q
    |||    
T  4690264 ggt 4690262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 15886188 - 15886390
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||| |||||||||||| || |||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  15886188 cacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 15886287  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      || ||||||||||||||||||| ||||||||| |||||| |||| ||||| | ||| ||||||||| ||||||| | | |||| ||| ||||||||||    
T  15886288 tgcatcttgctggggatagaatctcggaagactctactgggaataatgccgtcattgccgggcatttctgtgctggatgtatcgtggatgtcgcatctgt 15886387  T
Q  200 ggt 202  Q
    |||    
T  15886388 ggt 15886390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 5589804 - 5590005
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||| ||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  5589804 cacgtagtgactcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtaggta 5589903  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||| | ||||||||||||||||||  ||||||||| || ||||||  |||||||||||||||||||| ||||| ||||| || |||||||||    
T  5589904 tgcaacttgctagagatagaatcttggaagacctgactggggaaaatgccgttgcgctgggcatttcagtgctggatatgttgtagacattgcatctgtg 5590003  T
Q  201 gt 202  Q
    ||    
T  5590004 gt 5590005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 15368055 - 15367877
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagc-t 99  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| ||||||| | |||| |    
T  15368055 cacgtagtggctcgcgctacatcacacattcttggaaatcctctttggagataacgtcattgggagacgtatcggaaccatggttgagggcgggtagcat 15367956  T
Q  100 aatcaacttgctggggatagaatcttggaagactcgactggggataacgccgttat-gctgggcatttcagtgctgggt 177  Q
    |  |||||||||||||||||||||| |||||||||  |||||||||| ||||| || |||||||||||||||| |||||    
T  15367955 atgcaacttgctggggatagaatctcggaagactctgctggggataatgccgtcatcgctgggcatttcagtgttgggt 15367877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 2 - 202
Target Start/End: Complemental strand, 16422995 - 16422794
Alignment:
Q  2 acgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaa 101  Q
    |||||||||||||||||| || |||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| ||     
T  16422995 acgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagttat 16422896  T
Q  102 tcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
     |||||||| ||||||||||||| ||||||||| ||||||||||| ||||| | ||| ||| ||| |||||| |||| |  ||| ||| |||||||||||    
T  16422895 gcaacttgcaggggatagaatctcggaagactctactggggataatgccgtcattgccgggtattccagtgccgggtgtaccgtggatgtcgcatctgtg 16422796  T
Q  201 gt 202  Q
    ||    
T  16422795 gt 16422794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 19701206 - 19701029
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||| ||||||||||||||||| |||||||||||| |||||||||| |||||||||| ||||||    
T  19701206 cacgtagtggctcgtgctatattacacattcctggaaatcttctttggagataacgccattgggagacgtatcggaaccatgactgagggcaggtagcta 19701107  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggt 177  Q
      |||||||||||||||||||||| ||||||||| ||||||||||| ||||| | ||| |||| ||||||||| ||||    
T  19701106 tacaacttgctggggatagaatctcggaagactctactggggataatgccgtcattgccgggcctttcagtgccgggt 19701029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 32297442 - 32297241
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||| ||| ||||||| ||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||    
T  32297442 cacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggta 32297343  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||| ||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||||||||||||||||||| ||||| || || ||||||    
T  32297342 tgcaactcgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcctctgtg 32297243  T
Q  201 gt 202  Q
    ||    
T  32297242 gt 32297241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 4728415 - 4728265
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||||||    
T  4728415 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagcta 4728316  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||||||||||||||||||||||| |||||| |||||| |||| ||||    
T  4728315 tgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 4728265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 6208684 - 6208534
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||||||    
T  6208684 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagcta 6208585  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||||||||||||||||||||||| |||||| |||||| |||| ||||    
T  6208584 tgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 6208534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 11103832 - 11103982
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  11103832 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 11103931  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  11103932 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 11103982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 31029714 - 31029864
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||| |||||||||||| ||||||    
T  31029714 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccacggctgagggcaggtagcta 31029813  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  31029814 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 31029864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 16404240 - 16404441
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||| ||||||| |||||| |||| ||| |||||||||||| ||| ||    
T  16404240 cacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggggacgtatcggagccaaggctgagggcaggtaggta 16404339  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||||||||||||||||  ||||   || ||||| ||||||||| |||||||||| ||||||||||||| || ||||| || |||||||||    
T  16404340 tgcaacttgctggggatagaatcttgagagacctcaccggggaaaacgccgttgtgctgggcatctcagtgctgggtacgttgtagacattgcatctgtg 16404439  T
Q  201 gt 202  Q
    ||    
T  16404440 gt 16404441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 22864312 - 22864464
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||||||||||||||||||| |||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  22864312 cacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 22864411  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtt 153  Q
      ||||||||||||||||||||||||| |||||  |||||||| |||||||||    
T  22864412 tgcaacttgctggggatagaatcttgggagactttactggggaaaacgccgtt 22864464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 22879371 - 22879523
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||||||||||||||||||| |||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  22879371 cacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 22879470  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtt 153  Q
      ||||||||||||||||||||||||| |||||  |||||||| |||||||||    
T  22879471 tgcaacttgctggggatagaatcttgggagactttactggggaaaacgccgtt 22879523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 5717866 - 5717703
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  5717866 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 5717767  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||    
T  5717766 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcat 5717703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 5728776 - 5728613
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  5728776 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 5728677  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||    
T  5728676 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcat 5728613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 5763592 - 5763755
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  5763592 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 5763691  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||    
T  5763692 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcat 5763755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 4340147 - 4340297
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| |||| ||| |||||||||||| ||| ||    
T  4340147 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggtaggta 4340246  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  4340247 tgcaacttgctggggatagaatcttgggagactctactggggataatgccg 4340297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 5473778 - 5473628
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  5473778 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 5473679  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||| |||||||||||||||| ||||||||| |||||| |||| ||||    
T  5473678 tgcaactcgctggggatagaatctcggaagactctactgggaataatgccg 5473628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 16617938 - 16618116
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagc-t 99  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||| | ||||||||||||||||||| | |||| |    
T  16617938 cacgtagtagctcgtgctatatcacacattcttggaaatcctctttggagatatcgtcgttgggagacgcatcggaaccatggctgagggcgggtagcat 16618037  T
Q  100 aatcaacttgctggggatagaatcttggaagactcgactggggataacgccgttat-gctgggcatttcagtgctgggt 177  Q
    |  |||||||||||||||||||||| |||||||||  |||||||||| || || || |||||||||||||||| |||||    
T  16618038 atgcaacttgctggggatagaatctcggaagactccgctggggataatgctgtcatcgctgggcatttcagtgttgggt 16618116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 18058057 - 18057907
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||||||    
T  18058057 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagcta 18057958  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| || |||||| |||||| |||| ||||    
T  18057957 tgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 18057907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 18285827 - 18285977
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  18285827 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 18285926  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  18285927 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 18285977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 18301128 - 18301278
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  18301128 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 18301227  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  18301228 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 18301278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 21681531 - 21681330
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||| ||| ||||||| ||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||    
T  21681531 cacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggta 21681432  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
       ||||||||||||||||| |||||  ||||||  | ||||| ||||||||| |||||||||||||| |||||||||||| ||||| || |||||||||    
T  21681431 tgtaacttgctggggatagagtcttgagagactccgccggggaaaacgccgttgtgctgggcatttcaatgctgggtatgttgtagacattgcatctgtg 21681332  T
Q  201 gt 202  Q
    ||    
T  21681331 gt 21681330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 17970328 - 17970492
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||| ||  |||||||||||||||||||| || |||    
T  17970328 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacatattggaaccatggctgagggcaggtaacta 17970427  T
Q  101 atcaacttgc-tggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
    | |||||||| ||||||||||||||||  |||||| || ||||| ||||||||| ||||||||||    
T  17970428 aacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgttgtgctgggcat 17970492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 4423707 - 4423557
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||| ||| ||    
T  4423707 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaaccatggctgagggcaggtaggta 4423608  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||||||||||||||||||||||  |||||  ||||||||||| ||||    
T  4423607 tgcaacttgctggggatagaatcttgagagactttactggggataatgccg 4423557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 5658923 - 5658773
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||| ||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  5658923 cacgtagtggctcgtgctatattacaccttcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 5658824  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| || |||||| |||||| |||| ||||    
T  5658823 tgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 5658773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 29142225 - 29142375
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| ||||||||||||| |||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  29142225 cacgtagtggctcgtgctatattacacattcctggaaatcctcttcggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 29142324  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| || |||||| |||||| |||| ||||    
T  29142325 tgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 29142375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 32445941 - 32445791
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||| ||| ||| |||||||||||||  ||||||||||||||||||||| ||||||    
T  32445941 cacgtagtggctcgtgctatgttacacattcttggaaatcctctttggtgatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagcta 32445842  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      ||||||||||||||||||||||||| |||||| |||||| |||| ||||    
T  32445841 tgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 32445791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 8282931 - 8283076
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||| |||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||||||    
T  8282931 cacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagcta 8283030  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataa 146  Q
      |||||||||||||||||||||| ||||||||| |||||| ||||    
T  8283031 tgcaacttgctggggatagaatctcggaagactctactgggtataa 8283076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 10402963 - 10402762
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||  | ||||||||| ||| ||||||| ||||||| ||| |||||||||||||| |||||||||||| | |||| | ||| ||    
T  10402963 cacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgggggccggtaggta 10402864  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
       ||||||||||||||||| |||||  |||| | || ||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  10402863 tgtaacttgctggggatagagtcttgagagaccccaccggggaaaacgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 10402764  T
Q  201 gt 202  Q
    ||    
T  10402763 gt 10402762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 15734587 - 15734726
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||| ||||||| ||||||||| ||||||    
T  15734587 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggttgagggcaggtagcta 15734686  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactgg 140  Q
      |||||||||||||||||||||| || |||||| |||||    
T  15734687 tgcaacttgctggggatagaatctcgggagactctactgg 15734726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 4630570 - 4630420
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||| ||| ||| |||||||||||||  ||||||||||||||||||||  ||||||    
T  4630570 cacgtagtggctcgtgctatgttacacattcttggaaatcctctttggtgatgacgtcgttgggagacgtgtcggaaccatggctgagggcatgtagcta 4630471  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  4630470 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 4630420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 22041219 - 22041041
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagc-t 99  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||| | ||||||||||||||||||| | |||| |    
T  22041219 cacgtagtagctcgtgctatatcacacattcttggaaatcctctttggagatatcgtcgttgggagacgcatcggaaccatggctgagggcgggtagcat 22041120  T
Q  100 aatcaacttgctggggatagaatcttggaagactcgactggggataacgccgttat-gctgggcatttcagtgctgggt 177  Q
    |  |||||||||||||||||||||| |||||||||  |||| |||||  | || || |||||||||||||||| |||||    
T  22041119 atgcaacttgctggggatagaatctcggaagactccgctggagataatacagtcatcgctgggcatttcagtgttgggt 22041041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 35887549 - 35887399
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| || ||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||||||    
T  35887549 cacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagcta 35887450  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||| |||||| |||||| |||||| |||| ||||    
T  35887449 tgcaacttgctggggatagagtcttgggagactctactgggaataatgccg 35887399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 4790102 - 4790252
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||| |||||||||||| || |||||||| ||||||||||||| |||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  4790102 cacgtaatggctcgtgctatattacacattcctggaaatcctcttcggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 4790201  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||  |||||||||||||| |||||| |||||| |||| ||||    
T  4790202 tgcaacttgctaaggatagaatcttgggagactctactgggaataatgccg 4790252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 22381051 - 22381201
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || | || ||| |||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||||||    
T  22381051 cacgtagtggctcgtgctatattatactttcctggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagcta 22381150  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| || |||||| |||||| |||| ||||    
T  22381151 tgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 22381201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 18337413 - 18337268
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || | || ||| |||||||||||||||||||| ||| |||||||||||||  ||||||| ||||||||||||| ||||||    
T  18337413 cacgtagtggctcgtgctatattatactttcctggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccctggctgagggcaggtagcta 18337314  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataa 146  Q
      ||||||||||||||||||||||||| |||||| |||||| ||||    
T  18337313 cgcaacttgctggggatagaatcttgggagactctactgggaataa 18337268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 164
Target Start/End: Complemental strand, 28028079 - 28027919
Alignment:
Q  4 gtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatc 103  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||  ||| |||  |||||||||| | ||| ||  |    
T  28028079 gtagtggctcgtgctacattacacattcttggaaatcctcttcggagatgacgtcgttgggagacgtgtcgggacctaggctgagggccggtaggtatgc 28027980  T
Q  104 aacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
    |||||||||||||||||||||||  |||||  |||||||| ||||||||| ||||||||||    
T  28027979 aacttgctggggatagaatcttgagagactttactggggaaaacgccgttgtgctgggcat 28027919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 8218436 - 8218273
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||| ||||||||||||| || ||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||    
T  8218436 cacgtggtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggta 8218337  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
       |||||||||| |||||| |||||  |||||| |||||||| ||||||||| ||||||||||    
T  8218336 tgtaacttgctggagatagagtcttgagagactccactggggaaaacgccgttgtgctgggcat 8218273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 20072824 - 20072685
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||| |||  |||||||||| | ||||||    
T  20072824 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggccggtagcta 20072725  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactgg 140  Q
      ||||||||||||||||||||||||| |||||| |||||    
T  20072724 tgcaacttgctggggatagaatcttgggagactctactgg 20072685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 48472721 - 48472582
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||| |||  |||||||||| | ||||||    
T  48472721 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggccggtagcta 48472622  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactgg 140  Q
      ||||||||||||||||||||||||| |||||| |||||    
T  48472621 tgcaacttgctggggatagaatcttgggagactctactgg 48472582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 18249529 - 18249369
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||| ||||||| |||||| |||||||||||| |||||| | ||| ||    
T  18249529 cacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggggacgtatcggaaccatggccgagggccggtaggta 18249430  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctggg 161  Q
       ||||||||||||||||| |||||  |||||| || ||||| ||||||||| |||||||    
T  18249429 tgtaacttgctggggatagagtcttgagagactccaccggggaaaacgccgttgtgctggg 18249369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 151
Target Start/End: Complemental strand, 7079981 - 7079867
Alignment:
Q  37 aatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagactcga 136  Q
    |||| ||| ||| ||||||| |||||||||||||  |||||||| |||||||||||| ||||||  |||||||||||||||||||||| ||||||||| |    
T  7079981 aatcttctctggggataacgtcgttgggagacgtgtcggaaccaaggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactcta 7079882  T
Q  137 ctggggataacgccg 151  Q
    ||||| |||| ||||    
T  7079881 ctgggaataatgccg 7079867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 16599424 - 16599388
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaa 37  Q
    ||||||||||||||||||| || ||||||||||||||    
T  16599424 cacgtagtggctcgtgctatattacacattcttggaa 16599388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 4e-68; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 24585778 - 24585980
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  24585778 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcagatagcta 24585877  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      |||||||||||||||||||||| || |||||| |||||| |||| ||||| | ||| ||||||||||||||||||||||| |||||||||||||||||    
T  24585878 tgcaacttgctggggatagaatctcgggagactctactgggaataatgccgtcattgccgggcatttcagtgctgggtatgttgtagatatcgcatctgt 24585977  T
Q  200 ggt 202  Q
    |||    
T  24585978 ggt 24585980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 5012739 - 5012538
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  |||||||| |||||||||||| ||| ||    
T  5012739 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccacggctgagggcaggtaggta 5012640  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||||||||||||||||  |||| |||||||||||||| || || |||||||||| |||| ||||||||||||||||||||||||||||||    
T  5012639 tgcaacttgctggggatagaatcttgagagacccgactggggataacaccattgtgctgggcatgtcagcgctgggtatgtcgtagatatcgcatctgtg 5012540  T
Q  201 gt 202  Q
    ||    
T  5012539 gt 5012538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 21976562 - 21976361
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||||||    
T  21976562 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagcta 21976463  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      || ||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||| ||||||||||| ||||| || |||||||||    
T  21976462 tgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgttgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtg 21976363  T
Q  201 gt 202  Q
    ||    
T  21976362 gt 21976361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 54840249 - 54840048
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||| ||    
T  54840249 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtttcggaaccatggctgagggcaggtaggta 54840150  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| ||||||||||| ||||| || |||||||||    
T  54840149 tgcaacttgctggagatagaatcttggaagacccgactggggaaaacgccgttgtgctgggcatttcagcgctgggtatgttgtagacattgcatctgtg 54840050  T
Q  201 gt 202  Q
    ||    
T  54840049 gt 54840048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 20331842 - 20332043
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  20331842 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 20331941  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  20331942 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 20332041  T
Q  201 gt 202  Q
    ||    
T  20332042 gt 20332043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 31119917 - 31120118
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||||||    
T  31119917 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagcta 31120016  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      || ||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||| ||||||||||| ||| | || |||||||||    
T  31120017 tgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgttgtgctgggcatttcagcgctgggtatgttgtaaacattgcatctgtg 31120116  T
Q  201 gt 202  Q
    ||    
T  31120117 gt 31120118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 33667208 - 33667409
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||    
T  33667208 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggta 33667307  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||| || ||||| || |||||||||    
T  33667308 tgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtg 33667407  T
Q  201 gt 202  Q
    ||    
T  33667408 gt 33667409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 40099040 - 40099241
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  40099040 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 40099139  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||  || ||| |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  40099140 tgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 40099239  T
Q  201 gt 202  Q
    ||    
T  40099240 gt 40099241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 30760622 - 30760421
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||    
T  30760622 cacgtagtggctcgtgctatattacacattcttggaaatcctttttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggta 30760523  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||| || ||||| || |||||||||    
T  30760522 tgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtagacattgcatctgtg 30760423  T
Q  201 gt 202  Q
    ||    
T  30760422 gt 30760421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 1907126 - 1906924
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||||||| | |||||||||||| |||||||||| |||||||||| ||||||    
T  1907126 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcattgggagacgtatcggaaccatgactgagggcaggtagcta 1907027  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      |||||||||||||||||||||| ||||| ||| ||||||||||| ||||| | ||||||||||||||||||||||| |   || ||| ||||||||||    
T  1907026 tgcaacttgctggggatagaatctcggaaggctctactggggataatgccgtcattgctgggcatttcagtgctgggtgtactgtggatgtcgcatctgt 1906927  T
Q  200 ggt 202  Q
    |||    
T  1906926 ggt 1906924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 15234677 - 15234500
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||| ||||||    
T  15234677 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacgtatcggaaccatgactgagggcaggtagcta 15234578  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttat-gctgggcatttcagtgctgggt 177  Q
      |||||||||||||||||||||| |||||||||  |||||||||| ||||| || ||||||||||| ||||||||||    
T  15234577 tgcaacttgctggggatagaatctcggaagactctgctggggataatgccgtcatcgctgggcattttagtgctgggt 15234500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 15379645 - 15379822
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||| ||||||||||||||||| ||||||    
T  15379645 cacgtagtggctcgtgctatatcacacattcttggaaatcctctttggatataacgtcgttgggagacgtatcgggaccatggctgagggcaggtagcta 15379744  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttat-gctgggcatttcagtgctgggt 177  Q
      |||||||||||||||||||||| |||||||||  |||| ||||| ||||| || ||||||||||| |||| |||||    
T  15379745 tgcaacttgctggggatagaatctcggaagactctgctggagataatgccgtcatcgctgggcattttagtgttgggt 15379822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 14105402 - 14105201
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||| ||| ||||||| ||||||| ||| |||||||||||||| |||||||||||| |||||  | ||| ||    
T  14105402 cacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggtcggtaggta 14105303  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
       ||||||||||||||||| |||||  |||||| |||||||| ||||||||| ||||||||||||||||||||| ||||| ||||| || |||||||||    
T  14105302 tgtaacttgctggggatagagtcttgagagactccactggggaaaacgccgttgtgctgggcatttcagtgctggatatgttgtagacattgcatctgtg 14105203  T
Q  201 gt 202  Q
    ||    
T  14105202 gt 14105201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 27156733 - 27156896
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  27156733 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 27156832  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||    
T  27156833 tgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcat 27156896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 14752923 - 14753073
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  14752923 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 14753022  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  14753023 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 14753073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 15276033 - 15276166
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||| ||||||    
T  15276033 cacgtagtggctcgtgctatatcacacattcttggaaatcctctttggagataacgttgttgggagacgtatcggaaccatggctgagggcaggtagcta 15276132  T
Q  101 atcaacttgctggggatagaatcttggaagactc 134  Q
      | |||||||||||| ||||||| |||||||||    
T  15276133 tgcgacttgctggggacagaatctcggaagactc 15276166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 5701387 - 5701224
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||| |||||||||||| ||| ||    
T  5701387 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaaccaaggctgagggcaggtaggta 5701288  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||||||||| |||||||||||||||||||  || ||||| || |||||| ||||||||||    
T  5701287 tgcaacttgctggagatagaatcttggaagactttaccggggacaatgccgttgtgctgggcat 5701224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 6576695 - 6576544
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctcttt-ggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagct 99  Q
    ||||||||||||||||||| || ||||||||||||||||||||||| |||||| ||| |||||||||||||| ||||||||||||||||||||| ||  |    
T  6576695 cacgtagtggctcgtgctatattacacattcttggaaatcctcttttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaagt 6576596  T
Q  100 aatcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
    |  |||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  6576595 atgcaacttgctggggatagaatctcggaagactccactggggataatgccg 6576544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 14671848 - 14671698
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||| |||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  14671848 cacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 14671749  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| ||| || |||| ||||    
T  14671748 tgcaacttgctggggatagaatctcggaagactctactaggaataatgccg 14671698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 17019887 - 17019737
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||| |||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  17019887 cacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagtta 17019788  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  17019787 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 17019737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 36323744 - 36323894
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||||||| |||  |    
T  36323744 cacgtagtggctcgtgctatattacacattcttggaaatcctccttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggca 36323843  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  36323844 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 36323894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 36337953 - 36338103
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||||||| |||  |    
T  36337953 cacgtagtggctcgtgctatattacacattcttggaaatcctccttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggca 36338052  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  36338053 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 36338103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 39857473 - 39857335
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||||||||| || ||| ||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  39857473 cacgtagtggctcgtgctatattacacattcttggaattcttctgtggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 39857374  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactg 139  Q
      |||||||||||||||||||||| ||||||||| ||||    
T  39857373 tgcaacttgctggggatagaatctcggaagactctactg 39857335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 18794050 - 18794208
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||    
T  18794050 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggta 18794149  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctggg 161  Q
       ||||||||||||||||| |||||  |||||| || ||||| ||||||||| |||||||    
T  18794150 tgtaacttgctggggatagagtcttg--agactccaccggggaaaacgccgttgtgctggg 18794208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 34182368 - 34182515
Alignment:
Q  5 tagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatca 104  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||| |||  |||||||||| | ||||||  ||    
T  34182368 tagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcgggacctaggctgagggccggtagctatgca 34182467  T
Q  105 acttgctggggatagaatcttggaagactcgactggggataacgccgt 152  Q
    |||||||||||||||| |||||| |||||| |||||| |||| |||||    
T  34182468 acttgctggggatagagtcttgggagactctactgggaataatgccgt 34182515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 24119500 - 24119349
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaa-tcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagct 99  Q
    ||||||||||||||||||| || ||||||||| ||||| |||||||||||||| ||  |||||||||||||| ||| |||| ||||||||||   ||| |    
T  24119500 cacgtagtggctcgtgctatattacacattctcggaaaatcctctttggagatgacatcgttgggagacgtatcgggaccaaggctgagggccagtagat 24119401  T
Q  100 aatcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
    |  |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  24119400 atgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 24119349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 14791 - 14590
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  14791 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 14692  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      |||||||||||  || |||||| ||||| ||  |||||||| |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||    
T  14691 tacaacttgctggaaattgaatctcggaaggctttactggggaaaacgccgttatgctgggcatttcagtgctgggtacgttgtagacatcgcatctgtg 14592  T
Q  201 gt 202  Q
    ||    
T  14591 gt 14590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 4e-65; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 51645073 - 51644872
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||||||||||||||||||| |||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  51645073 cacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 51644974  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| |||||||||||||||||||  |||||||| ||||||||| |||||||||||||||| ||||||| || ||||| || |||||||||    
T  51644973 tgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcagtactgggtacgttgtagacattgcatctgtg 51644874  T
Q  201 gt 202  Q
    ||    
T  51644873 gt 51644872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 10951943 - 10951742
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  |||||||| |||||||||||| ||||||    
T  10951943 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccacggctgagggcaggtagcta 10951844  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
    | ||||||||||| ||||||||||||  || ||| |||||||| ||||||||| |||||||||||||||| ||||||| || ||| | ||||||||||||    
T  10951843 aacaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtactgggtaagttgtaaacatcgcatctgtg 10951744  T
Q  201 gt 202  Q
    ||    
T  10951743 gt 10951742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 20333824 - 20334026
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||| ||||||    
T  20333824 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagataacgtcgttgggagacgtatcggaaccatggccgagggcaggtagcta 20333923  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      ||||||||||||||||||||||  ||||||||  |||||||||| ||| | | ||||||||||||||||||||||| |   || ||| ||||||||||    
T  20333924 tgcaacttgctggggatagaatctcagaagactctgctggggataatgccatcactgctgggcatttcagtgctgggtgtactgtggatgtcgcatctgt 20334023  T
Q  200 ggt 202  Q
    |||    
T  20334024 ggt 20334026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 28591932 - 28591731
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||    
T  28591932 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggccgagggctggtaggta 28591833  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
       |||||||| |||||||| |||||  |||||| |||||||| ||||||||| ||||||||||||||||||||| ||||| ||||| || |||||||||    
T  28591832 tgtaacttgctagggatagagtcttgagagactccactggggaaaacgccgttgtgctgggcatttcagtgctggatatgttgtagacattgcatctgtg 28591733  T
Q  201 gt 202  Q
    ||    
T  28591732 gt 28591731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 20467635 - 20467458
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| || ||||||    
T  20467635 cacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacatatcggaaccatggctgagggtaggtagcta 20467536  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttat-gctgggcatttcagtgctgggt 177  Q
       ||||||||||||||||||||| |||||||||  |||||||||| ||||| || |||||||||||||||| |||||    
T  20467535 tgtaacttgctggggatagaatctcggaagactctgctggggataatgccgtcatcgctgggcatttcagtgttgggt 20467458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 21891157 - 21891359
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||| |||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  21891157 cacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 21891256  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      || ||||||||||||||||||| ||||||||| |||||| |||| ||||| | | | |||||||||||||| || | | |||| ||| ||||||||||    
T  21891257 tgcatcttgctggggatagaatctcggaagactctactgggaataatgccgtcattaccgggcatttcagtgccggatgtatcgtggatgtcgcatctgt 21891356  T
Q  200 ggt 202  Q
    |||    
T  21891357 ggt 21891359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 3647998 - 3647797
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||  | ||||||||| ||| ||||||| ||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  3647998 cacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 3647899  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
       ||||||||||||||||| |||||  |||||| || ||||| ||||||||| |||||||||||||| |||||||||||| ||||| || || ||||||    
T  3647898 tgtaacttgctggggatagagtcttgagagactccaccggggaaaacgccgttgtgctgggcatttcaatgctgggtatgttgtagacattgcgtctgtg 3647799  T
Q  201 gt 202  Q
    ||    
T  3647798 gt 3647797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 16201438 - 16201640
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||| ||||| || |||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||| ||||||    
T  16201438 cacgtagtggctcatgctatattacacattcctggaaatcctctttggagataacaccgttgggagacgtatcggaaccatgactgagggcaggtagcta 16201537  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
      ||||||||||||| |||||||| ||||||||| ||||||||||| | ||| | || |||||||||  ||||||||| |   || ||| ||||||||||    
T  16201538 tgcaacttgctgggggtagaatctcggaagactctactggggataatgtcgtcattgttgggcatttatgtgctgggtgtactgtggatgtcgcatctgt 16201637  T
Q  200 ggt 202  Q
    |||    
T  16201638 ggt 16201640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 14692324 - 14692474
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  |||||||||||||||| |||| ||||||    
T  14692324 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagagcaggtagcta 14692423  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| || |||||| |||||| |||| ||||    
T  14692424 tgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 14692474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 14695006 - 14695156
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  |||||||||||||||| |||| ||||||    
T  14695006 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagagcaggtagcta 14695105  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| || |||||| |||||| |||| ||||    
T  14695106 tgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 14695156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 14697690 - 14697840
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  |||||||||||||||| |||| ||||||    
T  14697690 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagagcaggtagcta 14697789  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| || |||||| |||||| |||| ||||    
T  14697790 tgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 14697840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 14700371 - 14700511
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  |||||||||||||||| |||| ||||||    
T  14700371 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagagcaggtagcta 14700470  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggg 141  Q
      |||||||||||||||||||||| || |||||| ||||||    
T  14700471 tgcaacttgctggggatagaatctcgggagactctactggg 14700511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 41786741 - 41786903
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||| ||||||||||||  || ||    
T  41786741 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccacggctgagggcaggcaggta 41786840  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||||||||| |||||||||||| ||||||  ||||||||||| ||||  |||||||||||    
T  41786841 tgcaacttgctggagatagaatcttgaaagactttactggggataatgccg-gatgctgggcat 41786903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 10969494 - 10969344
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||| ||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||    
T  10969494 cacgtagtgactcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggta 10969395  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      | ||||||||||||||||||||||  |||||  ||||||||||| ||||    
T  10969394 tgccacttgctggggatagaatcttgagagactttactggggataatgccg 10969344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 28156556 - 28156417
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||| |||  |||||||||| | ||||||    
T  28156556 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggccggtagcta 28156457  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactgg 140  Q
      ||||||||||||||||||||||||| |||||| |||||    
T  28156456 tgcaacttgctggggatagaatcttgggagactctactgg 28156417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 2584 - 2785
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||    
T  2584 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagata 2683  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||  || ||| |||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || | |||||||    
T  2684 tgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtgctgggtatgttgtagacattgtatctgtg 2783  T
Q  201 gt 202  Q
    ||    
T  2784 gt 2785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 202
Target Start/End: Complemental strand, 18582 - 18456
Alignment:
Q  76 aaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgg 175  Q
    |||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || ||| |||||||| ||||||||| |||||||||||||||||||||    
T  18582 aaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgttgtgctgggcatttcagtgctgg 18483  T
Q  176 gtatgtcgtagatatcgcatctgtggt 202  Q
    |||||| ||||| || | |||||||||    
T  18482 gtatgttgtagacattgtatctgtggt 18456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 10768 - 10566
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacatt-cttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagct 99  Q
    ||||||||||||||||||| || ||||||| |||||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||| ||| |||||    
T  10768 cacgtagtggctcgtgctatattacacatttcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaaccatggctgaggacaggtagct 10669  T
Q  100 aatcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgt 199  Q
    |  |||||||||||  ||||||||||||||||||  |||||||| ||||||||| ||||||||||||||  ||||||||||| ||||| || ||||||||    
T  10668 atgcaacttgctggaaatagaatcttggaagactttactggggaaaacgccgttgtgctgggcatttcaaagctgggtatgttgtagacattgcatctgt 10569  T
Q  200 ggt 202  Q
    |||    
T  10568 ggt 10566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 34121 - 33971
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||| |||||||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||||||    
T  34121 cacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagcta 34022  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||| ||||||||||| || |||||| |||||| |||| ||||    
T  34021 tgcaacttgctgaggatagaatctcgggagactctactgggaataatgccg 33971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 110; Significance: 1e-55; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 2506 - 2305
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| |||  ||||||||||||  ||||||||  ||||||||||| ||| ||    
T  2506 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgttgttgggagacgtgtcggaaccaaagctgagggcaggtagata 2407  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
      ||||||||||| ||||||||||||||||||  ||||||||| || |||||| ||||||||||||||| ||||||||||| ||||| || |||||||||    
T  2406 tacaacttgctggagatagaatcttggaagacctgactggggaaaatgccgttgtgctgggcatttcagggctgggtatgttgtagacattgcatctgtg 2307  T
Q  201 gt 202  Q
    ||    
T  2306 gt 2305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 12900 - 12722
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||||||||||| |||||||||||||| |||||||| ||| |||||||| ||||||    
T  12900 cacgtagtggctcgtgctacattacacatccctggaaatcctctttggagataacgtcgttgggagacgtatcggaaccacggccgagggcaggtagcta 12801  T
Q  101 atcaacttgctggggatagaatcttggaagactcgact-ggggataacgccgtta-tgctgggcatttcagtgctgggt 177  Q
       |||||| || ||||||||||| |||||||||  || |||||||| ||||| | |||||||||||||||||||||||    
T  12800 tgaaacttgttgcggatagaatctcggaagactctgctgggggataatgccgtcattgctgggcatttcagtgctgggt 12722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 25977 - 26154
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  25977 cacgtagtggctcatgctatatcacacattcttggaaatcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 26076  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttat-gctgggcatttcagtgctgggt 177  Q
    | |||||||||||||| ||||||| |||||||||  |||| |||||  |||| || |||||||||||||||| |||||    
T  26077 agcaacttgctggggaaagaatctcggaagactccgctggagataataccgtcatcgctgggcatttcagtgttgggt 26154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 28141 - 27966
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  28141 cacgtagtggctcgt--tatatcacacattcttggaaatcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 28044  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttat-gctgggcatttcagtgctgggt 177  Q
       ||||||||||||||||||||| |||||||||  |||||||||| ||||| || |||||||||||||||| |||||    
T  28043 tataacttgctggggatagaatctcggaagactccgctggggataatgccgtcatcgctgggcatttcagtgttgggt 27966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 16425 - 16224
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||||||||||||| || || ||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||    
T  16425 cacgtagtggctcgtgttatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggta 16326  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcatttcagtgctgggtatgtcgtagatatcgcatctgtg 200  Q
       |||| |||||||||||| |||||  |||||| || ||||| ||||||||| |||||||||||||||||||||||| || || || || |||||||||    
T  16325 tgtaactggctggggatagagtcttgagagactccaccggggaaaacgccgttgtgctgggcatttcagtgctgggtacgttgtggacattgcatctgtg 16226  T
Q  201 gt 202  Q
    ||    
T  16225 gt 16224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 621 - 444
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||| ||||||||| || ||||||||  ||||||||||||||||||||||| |||||||||||||| | ||||||||| ||||||||| ||||||    
T  621 cacgtagtgtctcgtgctatattacacattcccggaaatcctctttggagataacgtcgttgggagacgtatcagaaccatggttgagggcaggtagcta 522  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttat-gctgggcatttcagtgctgggt 177  Q
      |||| ||||||||||||||||| |||||||||  |||||||||| |||||||| | ||||||||||||||||||||    
T  521 tgcaacctgctggggatagaatctcggaagactctgctggggataatgccgttatcgttgggcatttcagtgctgggt 444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 8348 - 8511
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||| |||||||||||| ||| ||    
T  8348 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaaccaaggctgagggcaggtaggta 8447  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccgttatgctgggcat 164  Q
      ||||||||||| |||||||||||||||||||  || ||||| || |||||| ||||||||||    
T  8448 tgcaacttgctggagatagaatcttggaagactttaccggggacaatgccgttgtgctgggcat 8511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 24381 - 24531
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||||| |||||||||||| || |||||||| ||||||| |||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  24381 cacgtaatggctcgtgctatattacacattcctggaaattctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcta 24480  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  24481 tgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 24531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0792 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0792
Description:

Target: scaffold0792; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 4023 - 4173
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    |||| |||||||||||||| || ||||||||||||| ||||||||||||||| ||| |||||||||||||| ||| ||||||||| ||||||| ||||||    
T  4023 cacgcagtggctcgtgctatattacacattcttggacatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctaagggcaggtagcta 4122  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||||||| || |||||| |||||| |||| ||||    
T  4123 tgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 4173  T

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Target: scaffold0418 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 12865 - 12715
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||  ||| |||  |||||||||| | ||||||    
T  12865 cacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcgggacctaggctgagggccggtagcta 12766  T
Q  101 atcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
      |||||||||||||||||| |||||| |||||| |||||| |||| ||||    
T  12765 tgcaacttgctggggatagagtcttgggagactctactgggaataatgccg 12715  T

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Target: scaffold0547 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 9068 - 9214
Alignment:
Q  1 cacgtagtggctcgtgctacatcacacattcttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagcta 100  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| |||| |    
T  9068 cacgtagtggctcgtgctatattacacattcctggacatcctctttggagatgacgtcgttgggagacgtgtcggaaccatggctgagggcaggtagcca 9167  T
Q  101 atcaacttgc-tggggatagaatcttggaagactcgactggggataa 146  Q
      |||||||| || ||||||||||| ||||||||| |||||| ||||    
T  9168 tgcaacttgcttgaggatagaatctcggaagactctactgggaataa 9214  T

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Target: scaffold0099 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 151
Target Start/End: Original strand, 40032 - 40181
Alignment:
Q  6 agtggctcgtgctacatcacacatt--cttggaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctga-gggcagatagctaat 102  Q
    |||||||||||||| || |||||||  || | ||||||||||||||||| ||| |||||||||||||| ||||||||||||||| |||||| ||| ||||    
T  40032 agtggctcgtgctatattacacatttcctggaaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgaggggcaggtagttaat 40131  T
Q  103 -caacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
     |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  40132 gcaacttgctggggatagaatctcggaagactctactgggaataatgccg 40181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 6807 - 6741
Alignment:
Q  85 tgagggcagatagctaatcaacttgctggggatagaatcttggaagactcgactggggataacgccg 151  Q
    ||||||||| ||||||  |||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  6807 tgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 6741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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