View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1300_low_42 (Length: 226)
Name: NF1300_low_42
Description: NF1300
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1300_low_42 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 36112269 - 36112355
Alignment:
| Q |
140 |
caccacagacacgaattcccgggcaatcaattcatgcacagcacnnnnnnnnnnnncataagcaatttcatctttacacaaaacctt |
226 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
36112269 |
caccacaaacacgaattcccgggcaatcaattcatgcacagcacaaaaacaaaaaacataagcaatttcatctttacacaaaacctt |
36112355 |
T |
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