View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13011_low_3 (Length: 592)
Name: NF13011_low_3
Description: NF13011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13011_low_3 |
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Alignment Details
Target: chr6 (Bit Score: 516; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 516; E-Value: 0
Query Start/End: Original strand, 10 - 577
Target Start/End: Complemental strand, 26210526 - 26209960
Alignment:
| Q |
10 |
attatactcgctaattacattactttattttttaaatatgtgtacaagaatgttaaagaatcttataattaaagacggatgaagtagataatttggtata |
109 |
Q |
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| T |
26210526 |
attatactcgctaattacattactttattttttaaatatgtgtaaaagaatgttaaagaatattataattaaagacggatggagtagataatttggtata |
26210427 |
T |
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| Q |
110 |
ggctttagtttacttatatgagttcctacagttttctttttgtcatcaaatgtagttttatggctaaaaatatcatatcatatatagttttaaaagttta |
209 |
Q |
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| T |
26210426 |
ggctttagttttatt-tatgagttcctacagttttcttcttgtcatcaaatgtagttttatggctaataaaatcatatcatatatagttttaaaagtttg |
26210328 |
T |
|
| Q |
210 |
atcatgtcatcctaattacactatttcaaataaataagatttgtattgatagaacaaggcttggagcttagccagttaattcaatccatttgccaagaaa |
309 |
Q |
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| T |
26210327 |
atcatgtcatcctaattacactatttcaaataaataagatttgtattgatagaacaaggcttggagcttagccggttaattcaatccatttgccaagaaa |
26210228 |
T |
|
| Q |
310 |
tcatattaattatctgttagtctcaaaatatgtcatcaatttaacaacatattattaataatcaagataaattaaaatagtcaaacaagctaacattatt |
409 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
26210227 |
tcatattaattatctgttagtctcaaaatatgtcatcaatttaacaacatattattaataatcaagataaactaaaatagtcaaacaagctaacattatt |
26210128 |
T |
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| Q |
410 |
tattcaattttgagtgtatccctttgccatgtagtgcttggttcctactcacttggacaaagttgcccttatcttacttgatccccatcacatgctaagc |
509 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26210127 |
tattcaattttgagtgtatccctttgccatgtagtgcttggttcctactcacttggacaaagttgcccttatcttacttgatccccatcacatgctaagc |
26210028 |
T |
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| Q |
510 |
ttctatggacaaaatataaagttatggcacaaaatcagatactagaagattgagatattatatagtag |
577 |
Q |
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| T |
26210027 |
ttctatggacaaaatataaagttatggcacaaaatcagatactagaagattgagatattatatagtag |
26209960 |
T |
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