View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13013_low_11 (Length: 284)
Name: NF13013_low_11
Description: NF13013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13013_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 35604120 - 35603893
Alignment:
| Q |
19 |
aatcgcctaagaactttgatcaacaaatggatttcccacaaacaatcatatttcgtttcttcctgatcggtcatggacaacgctctcacgacctttaaaa |
118 |
Q |
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| T |
35604120 |
aatcgcctaagaactttgatcaacaaatggatttcccacaaacaatcatatttctatccttcctgatcggtcatggacaacgctctcacgacctttaaaa |
35604021 |
T |
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| Q |
119 |
tcctctaccatatccatttcaaacataaagtaaaaataaaggaagtagctttgaaactcaacattttcaaagcttttaacatcatgagttggtcttactt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35604020 |
tcctctaccatatccatttcaaacataaagtaaaaataaaggaagtagctttgaaactcaacattttcaaagcttttaacatcatgagttggtcttactt |
35603921 |
T |
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| Q |
219 |
gcaatccatcttgaatgagatgggtctc |
246 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
35603920 |
gcaatccatcttgaatgagatgggtctc |
35603893 |
T |
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