View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13018_high_2 (Length: 502)

Name: NF13018_high_2
Description: NF13018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13018_high_2
NF13018_high_2
[»] chr3 (59 HSPs)
chr3 (1-500)||(16743990-16744489)
chr3 (80-449)||(12030073-12030443)
chr3 (86-375)||(17912483-17912771)
chr3 (80-449)||(2049777-2050147)
chr3 (80-449)||(14842487-14842856)
chr3 (70-449)||(13838852-13839232)
chr3 (69-401)||(15858996-15859331)
chr3 (209-375)||(2449238-2449404)
chr3 (69-385)||(51158008-51158325)
chr3 (80-368)||(15936634-15936922)
chr3 (313-497)||(19231982-19232169)
chr3 (80-368)||(15938476-15938764)
chr3 (87-450)||(15614808-15615170)
chr3 (80-375)||(45860773-45861068)
chr3 (80-375)||(13954890-13955185)
chr3 (80-375)||(13975722-13976017)
chr3 (329-449)||(19260749-19260869)
chr3 (4-189)||(15468520-15468706)
chr3 (4-189)||(22275099-22275285)
chr3 (80-363)||(55316187-55316471)
chr3 (80-363)||(41270043-41270327)
chr3 (72-341)||(16821099-16821369)
chr3 (414-492)||(15857120-15857198)
chr3 (417-497)||(3992873-3992953)
chr3 (417-497)||(55513193-55513273)
chr3 (87-222)||(47984624-47984759)
chr3 (87-222)||(48003198-48003333)
chr3 (417-497)||(2844514-2844594)
chr3 (87-222)||(47993911-47994046)
chr3 (87-222)||(48012484-48012619)
chr3 (417-497)||(54037976-54038056)
chr3 (417-497)||(17955832-17955916)
chr3 (417-497)||(7854305-7854385)
chr3 (1-54)||(2449391-2449444)
chr3 (417-478)||(45581954-45582016)
chr3 (318-359)||(14080715-14080756)
chr3 (433-490)||(17205019-17205076)
chr3 (80-129)||(19231945-19231994)
chr3 (435-490)||(12031849-12031904)
chr3 (279-449)||(54651625-54651796)
chr3 (109-448)||(12264710-12265053)
chr3 (433-490)||(17191879-17191936)
chr3 (433-490)||(38810868-38810925)
chr3 (417-449)||(13954804-13954836)
chr3 (69-101)||(22144532-22144564)
chr3 (417-449)||(45861122-45861154)
chr3 (278-368)||(11986173-11986263)
chr3 (433-490)||(3576290-3576347)
chr3 (433-490)||(13301323-13301380)
chr3 (433-490)||(13311979-13312036)
chr3 (417-449)||(2449152-2449184)
chr3 (109-224)||(11329098-11329214)
chr3 (417-449)||(16261777-16261809)
chr3 (417-449)||(16933869-16933901)
chr3 (417-449)||(17912398-17912430)
chr3 (1-73)||(18969976-18970048)
chr3 (417-449)||(23492696-23492728)
chr3 (417-449)||(38168237-38168269)
chr3 (417-449)||(53771365-53771397)
[»] chr8 (39 HSPs)
chr8 (1-375)||(22907214-22907588)
chr8 (80-497)||(16404852-16405268)
chr8 (87-449)||(16193643-16194005)
chr8 (80-449)||(43373392-43373761)
chr8 (70-449)||(24928716-24929096)
chr8 (209-375)||(5238184-5238350)
chr8 (209-375)||(24661248-24661414)
chr8 (209-375)||(43685643-43685809)
chr8 (83-375)||(17345540-17345832)
chr8 (87-363)||(24548956-24549233)
chr8 (87-363)||(6774258-6774535)
chr8 (80-359)||(21844576-21844856)
chr8 (80-359)||(21851969-21852249)
chr8 (80-363)||(30120690-30120974)
chr8 (80-300)||(222754-222975)
chr8 (80-300)||(736377-736598)
chr8 (80-300)||(860272-860493)
chr8 (417-497)||(274766-274846)
chr8 (417-497)||(641003-641083)
chr8 (417-497)||(826809-826889)
chr8 (417-497)||(24716714-24716794)
chr8 (84-363)||(16674392-16674672)
chr8 (1-54)||(5238144-5238197)
chr8 (1-54)||(24661401-24661454)
chr8 (1-54)||(43685603-43685656)
chr8 (417-497)||(39115598-39115678)
chr8 (70-224)||(23837154-23837308)
chr8 (69-191)||(41246613-41246735)
chr8 (433-490)||(17285543-17285600)
chr8 (433-490)||(21198005-21198062)
chr8 (72-142)||(13662492-13662561)
chr8 (1-50)||(22321597-22321646)
chr8 (318-359)||(23149985-23150026)
chr8 (318-359)||(23226076-23226117)
chr8 (417-449)||(5238404-5238436)
chr8 (417-449)||(22907128-22907160)
chr8 (417-449)||(24385652-24385684)
chr8 (417-449)||(24661162-24661194)
chr8 (417-449)||(43685863-43685895)
[»] chr4 (34 HSPs)
chr4 (1-375)||(26680089-26680463)
chr4 (69-497)||(54118120-54118551)
chr4 (69-449)||(13246386-13246769)
chr4 (84-449)||(15675009-15675381)
chr4 (243-449)||(122020-122226)
chr4 (209-375)||(10488659-10488825)
chr4 (209-375)||(16327926-16328092)
chr4 (84-449)||(10104170-10104523)
chr4 (87-348)||(31115603-31115865)
chr4 (80-359)||(10644187-10644467)
chr4 (80-375)||(13048221-13048517)
chr4 (80-363)||(47357622-47357906)
chr4 (313-449)||(33240901-33241043)
chr4 (80-211)||(111362-111493)
chr4 (417-497)||(25119059-25119139)
chr4 (177-359)||(40885570-40885753)
chr4 (1-54)||(10488619-10488672)
chr4 (1-54)||(16328079-16328132)
chr4 (417-497)||(5682380-5682460)
chr4 (343-449)||(31132545-31132657)
chr4 (83-449)||(7849970-7850346)
chr4 (80-224)||(15044794-15044938)
chr4 (433-490)||(41165808-41165865)
chr4 (135-224)||(41166083-41166172)
chr4 (433-490)||(47534933-47534990)
chr4 (69-101)||(44055870-44055902)
chr4 (137-224)||(7185981-7186068)
chr4 (318-358)||(13809511-13809551)
chr4 (417-449)||(14952085-14952117)
chr4 (417-449)||(15135907-15135939)
chr4 (417-449)||(15272211-15272243)
chr4 (417-449)||(16327840-16327872)
chr4 (417-449)||(16609013-16609045)
chr4 (417-449)||(26680517-26680549)
[»] chr7 (42 HSPs)
chr7 (1-375)||(7292905-7293279)
chr7 (68-449)||(13036938-13037322)
chr7 (80-449)||(16211733-16212103)
chr7 (80-490)||(3059933-3060344)
chr7 (80-449)||(11580661-11581035)
chr7 (80-449)||(36052634-36053003)
chr7 (209-375)||(11516324-11516490)
chr7 (209-375)||(15441564-15441730)
chr7 (209-375)||(30262129-30262295)
chr7 (87-375)||(47481031-47481320)
chr7 (80-368)||(18253842-18254130)
chr7 (87-374)||(13320988-13321278)
chr7 (83-357)||(16478968-16479244)
chr7 (80-375)||(25292338-25292633)
chr7 (80-363)||(10989378-10989661)
chr7 (80-359)||(13572644-13572924)
chr7 (98-363)||(13911024-13911292)
chr7 (80-364)||(2437425-2437710)
chr7 (83-447)||(295893-296257)
chr7 (417-497)||(32493898-32493978)
chr7 (1-54)||(15441717-15441770)
chr7 (1-54)||(30262282-30262335)
chr7 (417-497)||(126738-126818)
chr7 (1-54)||(11516284-11516337)
chr7 (417-497)||(1936869-1936949)
chr7 (417-497)||(111121-111201)
chr7 (418-497)||(7283908-7283987)
chr7 (333-375)||(14113989-14114031)
chr7 (333-375)||(14423639-14423681)
chr7 (433-490)||(13377867-13377924)
chr7 (433-490)||(13389693-13389750)
chr7 (69-101)||(15822691-15822723)
chr7 (434-490)||(16919870-16919926)
chr7 (279-359)||(16914928-16915009)
chr7 (417-449)||(2029244-2029276)
chr7 (417-449)||(7293333-7293365)
chr7 (417-449)||(11516544-11516576)
chr7 (417-449)||(14113903-14113935)
chr7 (417-449)||(15441478-15441510)
chr7 (69-224)||(17224075-17224230)
chr7 (417-449)||(30262043-30262075)
chr7 (417-449)||(42056188-42056220)
[»] scaffold0078 (3 HSPs)
scaffold0078 (1-375)||(37066-37440)
scaffold0078 (417-497)||(41632-41712)
scaffold0078 (417-449)||(36980-37012)
[»] chr1 (23 HSPs)
chr1 (83-500)||(41394191-41394610)
chr1 (80-449)||(20445646-20446019)
chr1 (80-449)||(20931312-20931682)
chr1 (80-449)||(20531411-20531783)
chr1 (69-449)||(20893551-20893933)
chr1 (80-449)||(20913004-20913367)
chr1 (80-449)||(37844374-37844746)
chr1 (209-375)||(51452589-51452755)
chr1 (87-363)||(2116228-2116506)
chr1 (80-448)||(22227777-22228146)
chr1 (80-448)||(22232474-22232843)
chr1 (80-363)||(5072388-5072672)
chr1 (80-363)||(18601118-18601402)
chr1 (87-450)||(45051416-45051759)
chr1 (417-497)||(21860334-21860414)
chr1 (417-491)||(44034829-44034903)
chr1 (1-54)||(51452549-51452602)
chr1 (432-497)||(41218743-41218808)
chr1 (419-490)||(27675120-27675191)
chr1 (433-490)||(13376711-13376768)
chr1 (433-490)||(20177513-20177570)
chr1 (70-101)||(49967607-49967638)
chr1 (318-359)||(22143361-22143402)
[»] chr2 (33 HSPs)
chr2 (69-497)||(19794581-19795011)
chr2 (80-449)||(36982364-36982737)
chr2 (80-497)||(20627190-20627609)
chr2 (80-497)||(43642833-43643250)
chr2 (80-449)||(462706-463075)
chr2 (80-449)||(8891209-8891581)
chr2 (84-449)||(24341309-24341681)
chr2 (209-375)||(19689401-19689567)
chr2 (209-375)||(23820168-23820334)
chr2 (209-375)||(14906440-14906606)
chr2 (87-375)||(25265390-25265679)
chr2 (209-375)||(20015108-20015274)
chr2 (80-375)||(17396653-17396948)
chr2 (83-325)||(7507894-7508138)
chr2 (80-363)||(19886661-19886945)
chr2 (353-449)||(22863169-22863267)
chr2 (417-497)||(22275045-22275125)
chr2 (417-497)||(22284278-22284358)
chr2 (418-497)||(15633538-15633617)
chr2 (8-54)||(19689554-19689600)
chr2 (1-54)||(14906593-14906646)
chr2 (1-54)||(20015068-20015121)
chr2 (1-54)||(23820128-23820181)
chr2 (433-490)||(43646232-43646289)
chr2 (417-449)||(17396567-17396599)
chr2 (438-490)||(19660221-19660273)
chr2 (135-191)||(19669279-19669335)
chr2 (417-450)||(19689314-19689347)
chr2 (433-490)||(25305769-25305826)
chr2 (417-449)||(9652796-9652828)
chr2 (417-449)||(14906354-14906386)
chr2 (417-449)||(23820388-23820420)
chr2 (69-101)||(32465813-32465845)
[»] scaffold0266 (2 HSPs)
scaffold0266 (80-449)||(1091-1462)
scaffold0266 (80-449)||(3508-3877)
[»] scaffold0023 (2 HSPs)
scaffold0023 (80-449)||(48565-48935)
scaffold0023 (84-341)||(36065-36323)
[»] scaffold0077 (2 HSPs)
scaffold0077 (80-450)||(36836-37209)
scaffold0077 (433-497)||(15319-15383)
[»] chr6 (30 HSPs)
chr6 (69-449)||(23153403-23153786)
chr6 (87-448)||(14626045-14626407)
chr6 (80-375)||(35009439-35009735)
chr6 (83-375)||(1657748-1658040)
chr6 (83-375)||(15862443-15862734)
chr6 (87-450)||(1650020-1650382)
chr6 (80-363)||(25175531-25175815)
chr6 (80-363)||(27653983-27654267)
chr6 (80-363)||(16825752-16826038)
chr6 (417-497)||(19983144-19983224)
chr6 (417-497)||(35015009-35015089)
chr6 (380-449)||(23148266-23148335)
chr6 (83-216)||(27740808-27740941)
chr6 (417-497)||(18583640-18583720)
chr6 (69-223)||(18381821-18381975)
chr6 (292-375)||(27751605-27751688)
chr6 (177-375)||(29665937-29666137)
chr6 (433-490)||(21623506-21623563)
chr6 (433-490)||(22361619-22361676)
chr6 (94-200)||(22361926-22362032)
chr6 (318-359)||(16887792-16887833)
chr6 (279-359)||(18629608-18629689)
chr6 (69-98)||(32898745-32898774)
chr6 (318-359)||(33324898-33324939)
chr6 (318-359)||(35136013-35136054)
chr6 (418-490)||(14152632-14152704)
chr6 (417-449)||(18002395-18002427)
chr6 (417-449)||(23995247-23995279)
chr6 (109-224)||(25367374-25367490)
chr6 (417-449)||(26090059-26090091)
[»] scaffold0195 (2 HSPs)
scaffold0195 (80-446)||(19173-19543)
scaffold0195 (80-375)||(21257-21553)
[»] chr5 (41 HSPs)
chr5 (80-449)||(23506932-23507302)
chr5 (69-449)||(27182471-27182854)
chr5 (84-449)||(22053753-22054125)
chr5 (88-449)||(18530988-18531355)
chr5 (209-375)||(20623066-20623232)
chr5 (209-375)||(21233528-21233694)
chr5 (212-375)||(37052844-37053007)
chr5 (209-375)||(16536294-16536460)
chr5 (83-375)||(34939248-34939540)
chr5 (209-373)||(25900408-25900571)
chr5 (80-363)||(22366481-22366765)
chr5 (80-363)||(25426596-25426880)
chr5 (80-360)||(18777995-18778276)
chr5 (80-363)||(12342-12626)
chr5 (80-363)||(19499867-19500151)
chr5 (80-363)||(21073595-21073879)
chr5 (99-363)||(4199985-4200251)
chr5 (80-360)||(43443398-43443679)
chr5 (80-359)||(27009809-27010089)
chr5 (70-189)||(17471768-17471887)
chr5 (243-363)||(29188284-29188404)
chr5 (87-161)||(29190478-29190552)
chr5 (1-54)||(20623026-20623079)
chr5 (1-54)||(21233681-21233734)
chr5 (1-54)||(25900558-25900611)
chr5 (1-54)||(37052801-37052854)
chr5 (1-54)||(16536254-16536307)
chr5 (433-492)||(11584389-11584448)
chr5 (91-224)||(19862186-19862319)
chr5 (433-490)||(21222462-21222519)
chr5 (80-224)||(23493885-23494029)
chr5 (278-368)||(32950861-32950951)
chr5 (433-490)||(5450695-5450752)
chr5 (318-359)||(21310709-21310750)
chr5 (318-359)||(23981516-23981557)
chr5 (279-359)||(29918131-29918212)
chr5 (417-449)||(16105967-16105999)
chr5 (417-449)||(20623286-20623318)
chr5 (417-449)||(21233442-21233474)
chr5 (417-449)||(25900320-25900352)
chr5 (417-449)||(37053061-37053093)
[»] scaffold0106 (1 HSPs)
scaffold0106 (69-449)||(41686-42066)
[»] scaffold0175 (1 HSPs)
scaffold0175 (80-449)||(882-1250)
[»] scaffold0302 (1 HSPs)
scaffold0302 (80-449)||(12083-12450)
[»] scaffold0413 (1 HSPs)
scaffold0413 (80-449)||(5990-6358)
[»] scaffold0008 (3 HSPs)
scaffold0008 (80-449)||(128095-128464)
scaffold0008 (99-341)||(31697-31942)
scaffold0008 (73-101)||(22650-22678)
[»] scaffold0012 (1 HSPs)
scaffold0012 (80-449)||(247366-247738)
[»] scaffold0001 (3 HSPs)
scaffold0001 (70-449)||(171863-172242)
scaffold0001 (70-449)||(177566-177945)
scaffold0001 (69-101)||(70882-70914)
[»] scaffold0011 (3 HSPs)
scaffold0011 (80-449)||(123087-123460)
scaffold0011 (69-101)||(255074-255106)
scaffold0011 (69-101)||(261680-261712)
[»] scaffold0498 (1 HSPs)
scaffold0498 (80-449)||(8846-9215)
[»] scaffold0162 (3 HSPs)
scaffold0162 (80-449)||(26340-26710)
scaffold0162 (87-375)||(8180-8466)
scaffold0162 (433-490)||(6877-6934)
[»] scaffold0218 (1 HSPs)
scaffold0218 (80-439)||(4996-5356)
[»] scaffold0025 (3 HSPs)
scaffold0025 (84-449)||(8820-9192)
scaffold0025 (80-407)||(148688-149018)
scaffold0025 (349-449)||(146838-146938)
[»] scaffold0009 (1 HSPs)
scaffold0009 (70-449)||(271983-272362)
[»] scaffold0141 (6 HSPs)
scaffold0141 (209-375)||(26892-27058)
scaffold0141 (209-368)||(22637-22796)
scaffold0141 (1-54)||(22597-22650)
scaffold0141 (1-54)||(26852-26905)
scaffold0141 (417-449)||(22857-22889)
scaffold0141 (417-449)||(27112-27144)
[»] scaffold0124 (3 HSPs)
scaffold0124 (209-375)||(1582-1748)
scaffold0124 (1-54)||(1735-1788)
scaffold0124 (417-449)||(1496-1528)
[»] scaffold0049 (2 HSPs)
scaffold0049 (80-368)||(48155-48443)
scaffold0049 (418-497)||(20493-20572)
[»] scaffold0018 (1 HSPs)
scaffold0018 (243-447)||(51110-51314)
[»] scaffold0132 (2 HSPs)
scaffold0132 (87-375)||(13480-13769)
scaffold0132 (417-497)||(42677-42754)
[»] scaffold0125 (1 HSPs)
scaffold0125 (87-375)||(41622-41911)
[»] scaffold0026 (3 HSPs)
scaffold0026 (80-368)||(107715-108003)
scaffold0026 (80-359)||(64527-64812)
scaffold0026 (318-360)||(89863-89905)
[»] scaffold1542 (1 HSPs)
scaffold1542 (82-375)||(534-828)
[»] scaffold0028 (4 HSPs)
scaffold0028 (243-449)||(89378-89586)
scaffold0028 (324-449)||(107708-107835)
scaffold0028 (109-191)||(79533-79616)
scaffold0028 (318-359)||(79745-79786)
[»] scaffold0075 (1 HSPs)
scaffold0075 (83-375)||(34460-34755)
[»] scaffold0529 (1 HSPs)
scaffold0529 (87-364)||(2936-3215)
[»] scaffold0215 (2 HSPs)
scaffold0215 (87-341)||(9371-9626)
scaffold0215 (87-341)||(16269-16524)
[»] scaffold0076 (1 HSPs)
scaffold0076 (80-340)||(42965-43226)
[»] scaffold0622 (1 HSPs)
scaffold0622 (69-211)||(9338-9480)
[»] scaffold0772 (2 HSPs)
scaffold0772 (243-368)||(5660-5785)
scaffold0772 (417-449)||(5846-5878)
[»] scaffold0022 (2 HSPs)
scaffold0022 (80-325)||(5254-5498)
scaffold0022 (318-358)||(102923-102963)
[»] scaffold0369 (1 HSPs)
scaffold0369 (80-325)||(3690-3936)
[»] scaffold0116 (2 HSPs)
scaffold0116 (80-359)||(3-283)
scaffold0116 (417-497)||(30417-30497)
[»] scaffold0139 (2 HSPs)
scaffold0139 (80-341)||(14083-14344)
scaffold0139 (80-364)||(21115-21399)
[»] scaffold0420 (1 HSPs)
scaffold0420 (243-363)||(13325-13445)
[»] scaffold0034 (1 HSPs)
scaffold0034 (417-497)||(80187-80267)
[»] scaffold0104 (1 HSPs)
scaffold0104 (80-202)||(48482-48603)
[»] scaffold0016 (3 HSPs)
scaffold0016 (416-497)||(166116-166197)
scaffold0016 (416-491)||(162036-162111)
scaffold0016 (433-490)||(116410-116467)
[»] scaffold0184 (1 HSPs)
scaffold0184 (417-497)||(31132-31212)
[»] scaffold1560 (1 HSPs)
scaffold1560 (80-202)||(26-147)
[»] scaffold0686 (2 HSPs)
scaffold0686 (417-491)||(5735-5809)
scaffold0686 (417-491)||(5941-6015)
[»] scaffold1711 (1 HSPs)
scaffold1711 (243-363)||(1304-1424)
[»] scaffold0342 (1 HSPs)
scaffold0342 (416-497)||(304-385)
[»] scaffold0066 (3 HSPs)
scaffold0066 (109-325)||(54412-54630)
scaffold0066 (177-325)||(45094-45244)
scaffold0066 (109-153)||(45007-45051)
[»] scaffold1164 (1 HSPs)
scaffold1164 (418-497)||(1701-1780)
[»] scaffold0122 (2 HSPs)
scaffold0122 (418-497)||(19802-19881)
scaffold0122 (418-497)||(24106-24185)
[»] scaffold1404 (1 HSPs)
scaffold1404 (80-129)||(1815-1863)
[»] scaffold0361 (2 HSPs)
scaffold0361 (88-157)||(3183-3252)
scaffold0361 (286-375)||(3364-3453)
[»] scaffold0876 (1 HSPs)
scaffold0876 (418-488)||(94-164)
[»] scaffold0310 (1 HSPs)
scaffold0310 (418-492)||(6261-6335)
[»] scaffold0084 (1 HSPs)
scaffold0084 (250-368)||(56106-56226)
[»] scaffold0013 (1 HSPs)
scaffold0013 (433-490)||(35816-35873)
[»] scaffold0053 (2 HSPs)
scaffold0053 (69-224)||(76984-77139)
scaffold0053 (433-490)||(76699-76756)
[»] scaffold0467 (1 HSPs)
scaffold0467 (250-449)||(10256-10458)
[»] scaffold0021 (1 HSPs)
scaffold0021 (69-191)||(132420-132542)
[»] scaffold1295 (1 HSPs)
scaffold1295 (433-490)||(442-499)
[»] scaffold0507 (1 HSPs)
scaffold0507 (433-490)||(1363-1420)
[»] scaffold0456 (2 HSPs)
scaffold0456 (318-359)||(1546-1587)
scaffold0456 (318-359)||(8691-8732)
[»] scaffold0123 (1 HSPs)
scaffold0123 (318-359)||(8216-8257)
[»] scaffold0058 (2 HSPs)
scaffold0058 (318-359)||(70307-70348)
scaffold0058 (417-449)||(57392-57424)
[»] scaffold0409 (2 HSPs)
scaffold0409 (321-359)||(1348-1386)
scaffold0409 (321-359)||(9603-9641)
[»] scaffold1272 (1 HSPs)
scaffold1272 (433-490)||(632-689)
[»] scaffold0483 (1 HSPs)
scaffold0483 (433-490)||(6999-7056)
[»] scaffold0240 (1 HSPs)
scaffold0240 (69-98)||(7522-7551)
[»] scaffold0151 (1 HSPs)
scaffold0151 (318-359)||(22422-22463)
[»] scaffold0080 (1 HSPs)
scaffold0080 (433-490)||(43651-43708)
[»] scaffold0044 (1 HSPs)
scaffold0044 (69-98)||(38253-38282)
[»] scaffold0032 (3 HSPs)
scaffold0032 (318-359)||(93773-93814)
scaffold0032 (417-449)||(55904-55936)
scaffold0032 (417-449)||(108075-108107)
[»] scaffold0010 (1 HSPs)
scaffold0010 (433-490)||(31357-31414)
[»] scaffold0004 (1 HSPs)
scaffold0004 (417-450)||(193396-193429)
[»] scaffold0970 (1 HSPs)
scaffold0970 (135-191)||(2476-2532)
[»] scaffold0706 (1 HSPs)
scaffold0706 (417-449)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (417-449)||(878-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (417-449)||(9882-9914)
[»] scaffold0389 (1 HSPs)
scaffold0389 (318-358)||(10868-10908)
[»] scaffold0251 (1 HSPs)
scaffold0251 (417-449)||(13285-13317)


Alignment Details
Target: chr3 (Bit Score: 444; Significance: 0; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 444; E-Value: 0
Query Start/End: Original strand, 1 - 500
Target Start/End: Complemental strand, 16744489 - 16743990
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatttcaccaaaacaccaacaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
16744489 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatttcaccaaaacaccaacaac 16744390  T
101 aattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
16744389 aattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaat 16744290  T
201 catagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaat 300  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| |||||||||||||||    
16744289 catagctcaattcaactataacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaat 16744190  T
301 catacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaa 400  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
16744189 catacacttattatcaattcatggatacaaacatatcatcaaagttggagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaa 16744090  T
401 aattcacaaaatgatgatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttctcca 500  Q
    |||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
16744089 aatttacaaaatgatgatgattatggtaaagactaacctcgttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcca 16743990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 80 - 449
Target Start/End: Complemental strand, 12030443 - 12030073
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||| |||| || | |    
12030443 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccataacatcaattaacaacca 12030344  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     | ||||||||| |||||||||| |  |||| | ||| | ||| |  |||| |||| | |||  |||||| ||||| ||||| ||| || |||||||||     
12030343 tagcatcaattgaacaagaatcaaatatcaaattaacaataacttagcaaaattcaccaattgagcacaactttcacaacttatcacttttacatatttg 12030244  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||     
12030243 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataag 12030144  T
379 caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||| ||| || ||||||||||||||||    
12030143 caaaagtcatacaacatttgaaatttcacaaaatgatgatgattatgataatgattaacccccttacctta 12030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 86 - 375
Target Start/End: Complemental strand, 17912771 - 17912483
Alignment:
86 caaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacat 185  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| |||||    
17912771 caaaacacccacaacaattcaaattttcatcatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacat 17912672  T
186 caattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatgg 285  Q
    | |||| ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||     
17912671 cgattgaacatgaatcatagctcaattcaactacaacatatcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgt 17912572  T
286 aatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    ||||| ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
17912571 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatc-aagttggagcacgaatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 80 - 449
Target Start/End: Original strand, 2049777 - 2050147
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | |    
2049777 tttcaccaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 2049876  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     | ||||||||| |||| ||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||| | |||||||||     
2049877 tagcatcaattgaacaaaaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaagttatcatgtttacatatttg 2049976  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| |||||||||| |||| |||| ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||     
2049977 aacatgtaatttcaccaacaatcttacaattatcatcaattcaggcatacaaacatatcgtcacagttggagcacgaatttagcaacaattatccataag 2050076  T
379 caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
2050077 caaaattgatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 80 - 449
Target Start/End: Complemental strand, 14842856 - 14842487
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | |||||| |||| |||||||||  |||||||| |||| |||| |    
14842856 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaatcaattattcatcaatcataacatcaattaacatcca 14842758  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||||||||| |||||| |||| ||||     
14842757 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcataacttatcatttttacacatttg 14842658  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
14842657 aacatgcaatttcaccaacaatcatacaattatcttcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataat 14842558  T
379 caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    || |||||||||||||||||| ||||  |||| ||| |||||||||| |||||||||||||||||||||||    
14842557 cacaattcatacaacatttgagaatttgcaaagtgaagatgattatgataaagactaacccccttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 70 - 449
Target Start/End: Original strand, 13838852 - 13839232
Alignment:
70 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatcta 169  Q
    ||||||| |||||||| ||| ||||||||||||| ||  |||||| || |||  |||||| ||| |||||||| ||||||||||||||| | |||||| |    
13838852 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaaatcatgaatatgcatacccaaacaatgattcatcaaccacaacatcaa 13838950  T
170 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttc 268  Q
    ||| || | | ||||||||||| |||||||||||| |||||| |||| ||||| |  |||| |||| | |||  |||||||||||| ||||| ||||||     
13838951 ttaacagccataacatcaattgaacaagaatcataactcaatccaaccacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttg 13839050  T
269 tacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 368  Q
    | | ||||| |||||| ||||| |||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
13839051 ttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaat 13839150  T
369 catccataatcaaaattcatacaacatttgaaaa-ttcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
     || |||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||    
13839151 tattcataatcaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgatgaagactaacccccttacctta 13839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 69 - 401
Target Start/End: Complemental strand, 15859331 - 15858996
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 168  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | ||||||     
15859331 caattcaccattttcaccaaaacaacaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 15859232  T
169 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcattt 267  Q
    |||| || | | ||||||||||| |||||||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||||||    
15859231 attaacagccataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 15859132  T
268 ctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaa 367  Q
     | ||||||| |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
15859131 gttcatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaa 15859032  T
368 tcatccataat--caaaattcatacaacatttgaaa 401  Q
    | |||||| ||   ||||||||||||||| ||||||    
15859031 ttatccattatgcaaaaattcatacaacaattgaaa 15858996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 209 - 375
Target Start/End: Complemental strand, 2449404 - 2449238
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||||||||| |    
2449404 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 2449305  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
2449304 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 69 - 385
Target Start/End: Complemental strand, 51158325 - 51158008
Alignment:
69 caattcacaaatttcaccaaaacacc-aacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatc 167  Q
    |||||||||||||| | ||||||||  |||||||  |||||||  |||| ||||| |||||| ||| |||||||||||||||||||||||| | ||||||    
51158325 caattcacaaattt-agcaaaacacttaacaacatctcaaattaacatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatc 51158227  T
168 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatt 266  Q
     |||| || | | ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||    
51158226 aattaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatt 51158127  T
267 tctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaaca 366  Q
    | ||||||||| |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
51158126 tttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaaca 51158027  T
367 atcatccataatcaaaatt 385  Q
    || |||||||| |||||||    
51158026 attatccataagcaaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 80 - 368
Target Start/End: Complemental strand, 15936922 - 15936634
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||| || ||||| |||||||||  | |||||| |||| |||| |    
15936922 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatcca 15936824  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | ||||| |||| | |||  |||||||||||| ||||| |||||| |||| ||||     
15936823 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg 15936724  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 368  Q
    |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
15936723 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 15936634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 313 - 497
Target Start/End: Original strand, 19231982 - 19232169
Alignment:
313 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatt-cacaa 409  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||| |||||    
19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaa 19232081  T
410 aatgatgatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
19232082 aatgatgatgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 19232169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 80 - 368
Target Start/End: Complemental strand, 15938764 - 15938476
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||||||||| ||| |||| || ||||| |||||||||  | |||||| |||| |||| |    
15938764 tttcaccaaaacaccaaca-caattcaaattttcagcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatcca 15938666  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | ||||| |||| | |||  |||||||||||| ||||| |||||| |||| ||||     
15938665 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg 15938566  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 368  Q
    |||||| ||||| ||||||||||||||| |||| |||||||||||  |||||||||||||| | |||||||||||| |||||| ||||||    
15938565 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgattacaaacatatcattacagttggagcacgtatttagtaacaat 15938476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 87 - 450
Target Start/End: Original strand, 15614808 - 15615170
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||    
15614808 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 15614907  T
187 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatgg 285  Q
    |||||  ||||||||| | | ||| | ||| | ||| | |  ||||||| | |||  |||| || |||| ||||| |||||| ||||||||| ||||||     
15614908 aattgagcaagaatcaaatcccaaattaacaataacttagcaaaattcaccaattgagcaccatattcacaacttatcatttttacatatttgaacatgt 15615007  T
286 aatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaat 384  Q
    ||||| |||||||||| |||| |||| ||||||||||||||||||| ||| || || |||  |||||| ||| |||||  |||  | ||| || | |  |    
15615008 aatttcaccaacaatcctacaattatcatcaattcatgcatacaaatataacaccacagtaagagcacaaatctagcatgaattgttcatcaacccattt 15615107  T
385 tcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttaccttaa 450  Q
    |||||||||||  ||||||   |||||| |  ||||||||| ||||||||||||||||||||||||    
15615108 tcatacaacatgagaaaat--gcaaaatta-catgattatgataaagactaacccccttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 80 - 375
Target Start/End: Original strand, 45860773 - 45861068
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| | ||||||||||| |||||| ||  |||  ||| | || |||  |    
45860773 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattca 45860871  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| ||||| |||| | ||||| | ||  ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| ||| |||||    
45860872 taacatcatttgaacaagcatcacatctcaaattaatgacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacttattt 45860971  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    ||||||| ||||  ||||||||||||||| | || | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
45860972 aaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcacgaatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 80 - 375
Target Start/End: Complemental strand, 13955185 - 13954890
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||| ||| | ||||||||||| |||||| ||  |||  ||| | || |||  |    
13955185 tttcaccaaaacaccaaca-caactcaaattatcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattca 13955087  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| ||||| |||| | ||||| | ||  ||||| |  |  ||||||||| |||  ||||||| |||||||||  |||||| ||| |||||    
13955086 taacatcatttgaacaagcatcacatctcaaattaatgacaacttaggagaaattcatcaattgagcacaatattcataactgatcatttttacttattt 13954987  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    ||||||| ||||  ||||||||||||||| | || | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
13954986 aaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcacgaatttagcaacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 80 - 375
Target Start/End: Complemental strand, 13976017 - 13975722
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||| ||| | ||||||||||| |||||| ||  |||  ||| | || |||  |    
13976017 tttcaccaaaacaccaaca-caactcaaattatcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattca 13975919  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| ||||| |||| | ||||| | ||  ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| ||| |||||    
13975918 taacatcatttgaacaagcatcacatctcaaattaatgacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacttattt 13975819  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    ||||||| ||||  ||||||||||||||| | || | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
13975818 aaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcacgaatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 329 - 449
Target Start/End: Complemental strand, 19260869 - 19260749
Alignment:
329 aaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggta 428  Q
    ||||||||||||| | || ||||||||||||||||||||| ||||||||  ||||||||||||||||||||||| | |||||||||||||||||||| ||    
19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgata 19260770  T
429 aagactaacccccttacctta 449  Q
    |||||||||||||||||||||    
19260769 aagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 15468706 - 15468520
Alignment:
4 aaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaatt-cacaaatttcaccaaaacaccaacaacaa 102  Q
    |||||||| || ||| ||| |||||||| ||||||||  |||||||||||| | ||||| |||  ||||| ||||||||||||||||||| |||||||||    
15468706 aaccacaaccacaacttatgatcatacattccatcatgtttcaacaacaacatgtcataattcaccaatttcacaaatttcaccaaaacaacaacaacaa 15468607  T
103 ttcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaat 189  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||||||||||  || ||||||||  ||| ||  ||||||||||||    
15468606 ttcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcattcacaataacatcagttaacaataacaacatcaat 15468520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 22275099 - 22275285
Alignment:
4 aaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttc-ctcaattcacaaatttcaccaaaacaccaacaacaa 102  Q
    |||||||| || ||| ||| ||||| || ||||||||  |||||||||||| | ||||| ||| || | |||||||||||||||||||||||||||||||    
22275099 aaccacaaccacaacttatgatcatgcattccatcatgtttcaacaacaacatgtcataattcactaatttcacaaatttcaccaaaacaccaacaacaa 22275198  T
103 ttcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaat 189  Q
    |||||||||||||||||||| |||||| ||| ||||| ||||||||||||||  || ||||||||  ||| ||  ||||||||||||    
22275199 ttcaaattctcatcatcaattcatgaatatgcatacctaagcaatgattcattcacaataacatcagttaacaataacaacatcaat 22275285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 363
Target Start/End: Original strand, 55316187 - 55316471
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| | ||||||||||| |||||| ||  |||  ||| | || |||  |    
55316187 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattca 55316285  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| |    
55316286 taacatcatttgaacaagcatcacatctcaacttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat 55316385  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
     |||||| ||||| |||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
55316386 gaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 80 - 363
Target Start/End: Original strand, 41270043 - 41270327
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| | ||||||||||| |||||| ||  |||  ||| | || |||  |    
41270043 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattca 41270141  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| |    
41270142 taacatcatttgaacaagcatcacatctcaacttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat 41270241  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
     |||||| ||||  |||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
41270242 gaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 72 - 341
Target Start/End: Original strand, 16821099 - 16821369
Alignment:
72 ttcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctatt 171  Q
    ||||| |||||||| ||| |||||||||| ||| |  || ||||||| |||||||||| ||| | ||||||||||| |||||||||  |||| ||| | |    
16821099 ttcaccaatttcacaaaaccaccaacaaccatttat-ttatcatcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaat 16821197  T
172 agcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttct 269  Q
    | |||  | ||||||||||| ||| |||||| | ||||| ||||| ||||| |  |  ||||||| | |||| |||||||  ||||| |||  ||||| |    
16821198 aacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcatagcttaacattttt 16821297  T
270 acatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 341  Q
    |||||||| |||||| ||||| ||||||||||||||| |||| ||||||| ||||||||||||||| |||||    
16821298 acatatttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacataacatca 16821369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 414 - 492
Target Start/End: Complemental strand, 15857198 - 15857120
Alignment:
414 atgatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 492  Q
    |||||||||||| | |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
15857198 atgatgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcctatg 15857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 417 - 497
Target Start/End: Original strand, 3992873 - 3992953
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
3992873 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 3992953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 417 - 497
Target Start/End: Original strand, 55513193 - 55513273
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
55513193 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 55513273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 47984624 - 47984759
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    |||||| || |||||||||||||||||||||||||| |||||| ||| |||||||||  ||||||||||||| | |||||| |||| || ||| ||||||    
47984624 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatc 47984723  T
187 aattgcacaagaatcatagctcaattcaactacaac 222  Q
    ||||| ||| |||||| | |||||| |||| |||||    
47984724 aattgaacatgaatcacatctcaatccaacaacaac 47984759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 48003198 - 48003333
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    |||||| || |||||||||||||||||||||||||| |||||| ||| |||||||||  ||||||||||||| | |||||| |||| || ||| ||||||    
48003198 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatc 48003297  T
187 aattgcacaagaatcatagctcaattcaactacaac 222  Q
    ||||| ||| |||||| | |||||| |||| |||||    
48003298 aattgaacatgaatcacatctcaatccaacaacaac 48003333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 417 - 497
Target Start/End: Original strand, 2844514 - 2844594
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||    
2844514 atgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttttgctcctatgattct 2844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 47993911 - 47994046
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    |||||| || |||||||||||||||||||||||||| |||||| ||| |||||||||  ||||||||||||| | || ||| |||| || ||| ||||||    
47993911 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatc 47994010  T
187 aattgcacaagaatcatagctcaattcaactacaac 222  Q
    ||||| ||| |||||| | |||||| |||| |||||    
47994011 aattgaacatgaatcacatctcaatccaacaacaac 47994046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 48012484 - 48012619
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    |||||| || |||||||||||||||||||||||||| |||||| ||| |||||||||  ||||||||||||| | || ||| |||| || ||| ||||||    
48012484 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatc 48012583  T
187 aattgcacaagaatcatagctcaattcaactacaac 222  Q
    ||||| ||| |||||| | |||||| |||| |||||    
48012584 aattgaacatgaatcacatctcaatccaacaacaac 48012619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 417 - 497
Target Start/End: Complemental strand, 54038056 - 54037976
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
54038056 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 54037976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 417 - 497
Target Start/End: Complemental strand, 17955916 - 17955832
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagct----ctagcttcactttagctcctatgcttct 497  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||    ||||||||||||| ||||||||| ||||    
17955916 atgattatgataaagactaacccccttaccttaattatctccaactattagctctacctagcttcacttttgctcctatgattct 17955832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 417 - 497
Target Start/End: Original strand, 7854305 - 7854385
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| | || |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
7854305 atgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 7854385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2449444 - 2449391
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
2449444 atcaactacaatcataacatataatcataccctccatcataattcaacaacaac 2449391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 417 - 478
Target Start/End: Original strand, 45581954 - 45582016
Alignment:
417 atgattatggtaaagactaacccc-cttaccttaattatctccaactactagctctagcttca 478  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
45581954 atgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca 45582016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 14080715 - 14080756
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    |||||||||||||||||||||||| |||||||||||||||||    
14080715 ttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 490
Target Start/End: Original strand, 17205019 - 17205076
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 17205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 19231945 - 19231994
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaa 129  Q
    |||||||||||||||||||||||| |||||| ||||||||||| ||||||    
19231945 tttcaccaaaacaccaacaacaatccaaattatcatcatcaattcatgaa 19231994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 435 - 490
Target Start/End: Original strand, 12031849 - 12031904
Alignment:
435 aacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
12031849 aacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 12031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 279 - 449
Target Start/End: Original strand, 54651625 - 54651796
Alignment:
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aa 377  Q
    |||||| ||||| ||  ||||||||||| |||| ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||||||| || ||| ||    
54651625 aacatgcaatttcactcacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaa 54651724  T
378 tcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
     | |  ||||||||||||  |||| | || ||| |||  ||||||||| | ||||| |||||||||||||||    
54651725 cccattttcatacaacatgagaaattgcaaaaattgaacatgattatgatgaagacaaacccccttacctta 54651796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 448
Target Start/End: Complemental strand, 12265053 - 12264710
Alignment:
109 ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctc 208  Q
    |||||||||||||||||| |  |||||||||||||  || ||||| | || | ||||||  |||  | ||||||||||||| | ||| |||||| | |||    
12265053 ttctcatcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctc 12264954  T
209 aattcaactacaacatgtcaaa--ttcatccattttgcacaattttcataacttctcatttctacata--tttaaacatggaatttaaccaacaatcata 304  Q
    | |||||| ||||||| |||||  |||||| |||  | | || | |||||||||  ||||| ||||||  || ||||||| ||||| ||| |||| ||||    
12264953 atttcaacaacaacatatcaaaatttcatcaattaagtataa-tctcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacata 12264855  T
305 cacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaat 403  Q
    |  | || ||||||||||||| |  || ||| ||||| ||   |||||||||||||||||||||  | ||| || | |  ||||||||||||  ||||||    
12264854 ccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaat 12264755  T
404 tcacaaaatgatgatgattatggtaaagactaacccccttacctt 448  Q
     || ||| ||   ||||||||| |||  |||||||||||||||||    
12264754 gcaaaaattgtacatgattatgataataactaacccccttacctt 12264710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 490
Target Start/End: Original strand, 17191879 - 17191936
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||||| |||| | ||||| | | |||||||||||||||||    
17191879 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 17191936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 38810925 - 38810868
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||| ||||| |||| | ||||| | |||||||||||||||||||    
38810925 ctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctccta 38810868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 13954836 - 13954804
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    |||||||||||||||||||||||||||||||||    
13954836 atgattatggtaaagactaacccccttacctta 13954804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 22144564 - 22144532
Alignment:
69 caattcacaaatttcaccaaaacaccaacaaca 101  Q
    |||||||||||||||||||||||||||||||||    
22144564 caattcacaaatttcaccaaaacaccaacaaca 22144532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 45861122 - 45861154
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    |||||||||||||||||||||||||||||||||    
45861122 atgattatggtaaagactaacccccttacctta 45861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 368
Target Start/End: Complemental strand, 11986263 - 11986173
Alignment:
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 368  Q
    ||||||| ||||| | | ||||||||||| |||| || || ||||||| || || ||| ||||| |||| ||||||||||||| |||||||    
11986263 aaacatgtaatttcaaccacaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat 11986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 3576347 - 3576290
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||||| | || | ||||| | |||||||||||| ||||||    
3576347 ctaacccccttaccttaattatcacaaattcctagcccaagcttcactttacctccta 3576290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 13301380 - 13301323
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
13301380 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13301323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 13312036 - 13311979
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
13312036 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13311979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 224
Target Start/End: Complemental strand, 11329214 - 11329098
Alignment:
109 ttctcatcatcaatccatgaa-catgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 207  Q
    ||||||||| |||  |||||| |||| |||||||||| |||| | |||| | | ||||||  |||||| |||||||||||||||  || ||||| || |     
11329214 ttctcatcaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatca 11329115  T
208 caattcaactacaacat 224  Q
    ||||||||| |||||||    
11329114 caattcaacaacaacat 11329098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 16261777 - 16261809
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
16261777 atgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18969976 - 18970048
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaatt 73  Q
    ||||||||||| || ||| ||||||||| |  ||||||| |||||||||||||| | ||||| ||| ||||||    
18969976 atcaaccacaaccacaacttataatcatgctttccatcagaattcaacaacaacatgtcataattcatcaatt 18970048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 23492696 - 23492728
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
23492696 atgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 38168237 - 38168269
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
38168237 atgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 53771365 - 53771397
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
53771365 atgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 339; Significance: 0; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 1 - 375
Target Start/End: Complemental strand, 22907588 - 22907214
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatttcaccaaaacaccaacaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
22907588 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcatcaattcacaaatttcaccaaaacaccaacaac 22907489  T
101 aattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaat 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
22907488 aattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat 22907389  T
201 catagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaat 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| |||||||||||||||    
22907388 catagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaat 22907289  T
301 catacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
22907288 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 80 - 497
Target Start/End: Complemental strand, 16405268 - 16404852
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||| ||||||  || ||||||||||| |||||||||||||| |||||| |||| || |||    
16405268 tttcatcaaaacaccaacaacatctcaaattatcatcatcaattcatgaatttgcatacccaagcagtgattcatcaactaaaacatcaattaacaacaa 16405169  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| ||||||||||||  |||||| |||   ||| |  |||| |||| | |||  |||||||||||| |||||  ||||| | | |||||     
16405168 taacatcaattgaacaagaatcatatgtcaatttaac---aacttagcaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttg 16405072  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| ||    
16405071 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaataattatccatcat 16404972  T
379 --caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagctt 476  Q
       ||||||||||||||||||||||||| || |||| |||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||    
16404971 gcaaaaattcatacaacatttgaaaatttac-aaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctctagctt 16404873  T
477 cactttagctcctatgcttct 497  Q
    |||||| ||||||||| ||||    
16404872 cacttttgctcctatgattct 16404852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 87 - 449
Target Start/End: Complemental strand, 16194005 - 16193643
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    |||||||||||||||  |||||||  |||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||||||    
16194005 aaaacaccaacaacatctcaaattaacatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatc 16193906  T
187 aattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatgg 285  Q
    ||||| |||||||||| | ||||| | ||| ||||  || |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| ||||||     
16193905 aattgaacaagaatcaaatctcaaattaacaacaatttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgt 16193806  T
286 aatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaatt 385  Q
    |||||  |||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
16193805 aatttccccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataagcaaaatt 16193706  T
386 catacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    ||||||| ||||||||||| || ||||||||||||||||| |||||||||| ||||||||||||    
16193705 catacaatatttgaaaatttaccaaatgatgatgattatgataaagactaa-ccccttacctta 16193643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 80 - 449
Target Start/End: Complemental strand, 43373761 - 43373392
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||||   |||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||| | |||||| |||| || | |    
43373761 tttcaccaaaacaccaacaa---ttcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca 43373665  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     | ||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||||||||     
43373664 tagcatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 43373565  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| ||||||||||||| | |||| |||||||||||||||||||| |||||||| |||||||||||||||||||||  ||| |||||| ||    
43373564 aacatgtaatttcaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcacagttggagcacgaatttagcattaattatccattat 43373465  T
379 --caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
       |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
43373464 acaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 70 - 449
Target Start/End: Complemental strand, 24929096 - 24928716
Alignment:
70 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatcta 169  Q
    ||||||| |||||||| ||| ||||||||||||| ||  |||||| || |||  |||||| ||| |||||||||||||||||||||||  | |||||| |    
24929096 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaaatcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaa 24928998  T
170 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattttgcacaattttcataacttctcatttc 268  Q
    ||| || | | ||| ||||||| ||||||  |||| |||||| |||| ||||| |  | ||||||| | |||  |||||||||||| ||||| ||||||     
24928997 ttaacaaccataacctcaattgaacaagagacataactcaatccaaccacaacttagcgaaattcaccaattgagcacaattttcacaacttatcatttg 24928898  T
269 tacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 368  Q
    | | ||||| |||||| ||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
24928897 ttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatataatcacagttggagcacgaatttagcaacaat 24928798  T
369 catccataatcaaaattcatacaacatttgaaaa-ttcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
     ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||| ||||||||    
24928797 tatccataatcaaaattcatacaacatttgaaaatttcacaaaatgacgatgattatgataaagactaaccccattacctta 24928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 209 - 375
Target Start/End: Original strand, 5238184 - 5238350
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
5238184 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 5238283  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
5238284 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 209 - 375
Target Start/End: Complemental strand, 24661414 - 24661248
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
24661414 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 24661315  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
24661314 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 209 - 375
Target Start/End: Original strand, 43685643 - 43685809
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
43685643 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 43685742  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
43685743 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 83 - 375
Target Start/End: Original strand, 17345540 - 17345832
Alignment:
83 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 182  Q
    |||||||||||||||||||||||||||| |||||| | || |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| ||    
17345540 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataa 17345639  T
183 catcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattc-atccattttgcacaattttcataacttctcatttctacatatttaaac 281  Q
     ||||| || |||||||||||| ||||||||| | | ||| |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || |||    
17345640 tatcaactgaacaagaatcataactcaattca-caataacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaac 17345738  T
282 atggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||  |||| ||||||||||||||| |||| ||||||||||||||| ||||||| ||||| |||| |||||||||||| |||||||| ||||||    
17345739 atgtgatttcaccaacaatcatacaattatcatcaattcatgcatataaacataacatcacagttagagcacgaatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 87 - 363
Target Start/End: Original strand, 24548956 - 24549233
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||    
24548956 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 24549055  T
187 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatgg 285  Q
    |||||  ||||||||| | | ||| | ||| | ||| | |  ||||||| | |||  |||| ||||||| ||||| |||||| ||||||||| ||||||     
24549056 aattgagcaagaatcaaatcccaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgt 24549155  T
286 aatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||  |||||||||| |||||    
24549156 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 87 - 363
Target Start/End: Complemental strand, 6774535 - 6774258
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    |||||||||||||||| |||||||||||| |||||| |||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| ||||||    
6774535 aaaacaccaacaacaaatcaaattctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatc 6774436  T
187 aattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatgg 285  Q
    |||||  ||||||||| | ||||| | ||| | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| ||||||     
6774435 aattgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgt 6774336  T
286 aatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||  |||||||||| |||||    
6774335 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 80 - 359
Target Start/End: Complemental strand, 21844856 - 21844576
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
21844856 tttcaccaaaacaccaaca-caattcaaattctcatcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 21844758  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| |||| ||||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||    
21844757 taacatcatttgaacaaaaatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt 21844658  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    ||||||| ||||| ||||||||||||||| | || ||||||||||||||||||||||| ||||| ||   ||||||||||||    
21844657 aaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 21844576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 80 - 359
Target Start/End: Complemental strand, 21852249 - 21851969
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
21852249 tttcaccaaaacaccaaca-caattcaaattctcatcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 21852151  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| |||||||||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||    
21852150 taacatcatttgaacaagaatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt 21852051  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    ||||||  ||||| ||||||||||||||| | || ||||||||||||||||||||||| ||||| ||   ||||||||||||    
21852050 aaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 21851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 80 - 363
Target Start/End: Original strand, 30120690 - 30120974
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| ||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
30120690 tttcaccaaaacaccaaca-caattcaaattatcatcatcaatcgatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 30120788  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||||||| ||| |||||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| |    
30120789 taacatcaattgaacatgaatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat 30120888  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
     |||||| ||||| |||||||||||||||  ||  || |||||||||||||||||||| ||||| ||   ||||||||||||||||    
30120889 gaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 80 - 300
Target Start/End: Complemental strand, 222975 - 222754
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
222975 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 222877  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
222876 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 222777  T
278 aaacatggaatttaaccaacaat 300  Q
     |||||| ||||| |||||||||    
222776 gaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 80 - 300
Target Start/End: Complemental strand, 736598 - 736377
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
736598 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 736500  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
736499 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 736400  T
278 aaacatggaatttaaccaacaat 300  Q
     |||||| ||||| |||||||||    
736399 gaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 80 - 300
Target Start/End: Complemental strand, 860493 - 860272
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
860493 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 860395  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
860394 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 860295  T
278 aaacatggaatttaaccaacaat 300  Q
     |||||| ||||| |||||||||    
860294 gaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 417 - 497
Target Start/End: Original strand, 274766 - 274846
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
274766 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 274846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 417 - 497
Target Start/End: Complemental strand, 641083 - 641003
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
641083 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 641003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 417 - 497
Target Start/End: Complemental strand, 826889 - 826809
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
826889 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 826809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 417 - 497
Target Start/End: Complemental strand, 24716794 - 24716714
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||    
24716794 atgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttttgctcctatgattct 24716714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 84 - 363
Target Start/End: Complemental strand, 16674672 - 16674392
Alignment:
84 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaac 183  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| ||| | || |||||||| |||||| ||  |||  ||| | || |||  | |||    
16674672 accaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcaaactcaagcaattattcattaatcatattatcaaataacattcataac 16674574  T
184 atcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaac 281  Q
    |||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| | |||    
16674573 atcatttgaacaagcatcacatctcaacttaacaacaacttaggagaaattcaccaattaagcacaatattcataacttatcatttttgcatatatgaac 16674474  T
282 atggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
    ||| ||||| |||||||||||||||  ||  || |||||||||||| ||||||| ||||| ||   ||||||||||||||||    
16674473 atgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcacagaaagagcacgaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5238144 - 5238197
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
5238144 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 5238197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24661454 - 24661401
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
24661454 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 24661401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43685603 - 43685656
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
43685603 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 43685656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 417 - 497
Target Start/End: Original strand, 39115598 - 39115678
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| | || |||||| ||||||||||||||||  ||||||| |||||| ||||||||||| ||||||||| ||||    
39115598 atgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttttgctcctatgattct 39115678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 224
Target Start/End: Original strand, 23837154 - 23837308
Alignment:
70 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatct 168  Q
    ||||||| |||||||| ||| ||||| |||||| |||  ||||||||| |||  ||||||  ||| |||||||||| |||| |||||||| | ||||||     
23837154 aattcaccaatttcacaaaaccaccaccaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatca 23837252  T
169 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 224  Q
     |||||| ||||||||||||||| ||| || || || | ||||||||| |||||||    
23837253 cttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaacaacat 23837308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 41246613 - 41246735
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaa-catgtatacccaagcaatgattcatcaactataacatc 167  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||| || ||| ||||||| |||| | |||||||| |||| | |||| | | |||||     
41246613 caattcacaaatttcaccaaaacaccaacaacatttc-atttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatg 41246711  T
168 tattagcatcaacaacatcaattg 191  Q
      ||| || |||||||||||||||    
41246712 acttaacaacaacaacatcaattg 41246735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 490
Target Start/End: Original strand, 17285543 - 17285600
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||||| |||| | ||| | | |||||||||||||||||||    
17285543 ctaacccccttaccttaattatcaccaattcctaacccaagcttcactttagctccta 17285600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 21198062 - 21198005
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    |||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||    
21198062 ctaacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 21198005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 13662561 - 13662492
Alignment:
72 ttcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaa 142  Q
    ||||| |||||||| ||| |||||||||||||| |  |||||||||||||||||| |  ||||||||||||    
13662561 ttcaccaatttcacaaaaccaccaacaacaatttag-ttctcatcatcaatccataattatgtatacccaa 13662492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22321646 - 22321597
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaa 50  Q
    |||||||||||||| ||||||||||||| || ||||||| |||| |||||    
22321646 atcaaccacaatcacaacatataatcatgcattccatcacaatttaacaa 22321597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 23149985 - 23150026
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    ||||||||| |||||||||||||| | |||||||||||||||    
23149985 ttcatgcattcaaacatatcatcataattggagcacgaattt 23150026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 23226117 - 23226076
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
23226117 ttcatgcatacaaacatatcatcatagttagagcacaaattt 23226076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 24385684 - 24385652
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
24385684 atgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 331; Significance: 0; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 26680089 - 26680463
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatttcaccaaaacaccaacaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||    
26680089 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcatcgattcccaaatttcaccaaaacaccaacaac 26680188  T
101 aattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaat 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
26680189 aattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat 26680288  T
201 catagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaat 300  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||    
26680289 catagctcaattcaactacaacatgtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaat 26680388  T
301 catacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
26680389 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 69 - 497
Target Start/End: Complemental strand, 54118551 - 54118120
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 168  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | ||||||     
54118551 caattcaccattttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 54118452  T
169 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcattt 267  Q
    |||| || | | ||||||||||| |||||||||||| || |||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| ||| ||    
54118451 attaacaactataacatcaattgaacaagaatcataactaaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcaatt 54118352  T
268 ctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaa 367  Q
     | | ||||| |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
54118351 gttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaa 54118252  T
368 tcatccataatc--aaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttaccttaattatctccaactact 465  Q
    | |||||| ||   ||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||| |    
54118251 ttatccattatgcaaaaattcatacaacatttgaaaattcacaaaataatgatgattatgatgaagactaacccccttaccttaattatctccaactatt 54118152  T
466 agctctagcttcactttagctcctatgcttct 497  Q
    ||||||||||||||||| |||| |||| ||||    
54118151 agctctagcttcacttttgctcttatgattct 54118120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 69 - 449
Target Start/End: Original strand, 13246386 - 13246769
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||| | ||||||     
13246386 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 13246485  T
169 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcattt 267  Q
    |||| || | | ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| ||||||    
13246486 attaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 13246585  T
268 ctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaa 367  Q
     | | ||||| |||||| ||||| ||||||||||||||| |||| || |||||||||||||||||||||||||| ||||| |||||||||||| ||||||    
13246586 gttcctatttgaacatgtaatttcaccaacaatcatacaattatcattaattcatgcatacaaacatatcatcacagttgtagcacgaatttaacaacaa 13246685  T
368 tcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    | |||||| ||   ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
13246686 ttatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 84 - 449
Target Start/End: Complemental strand, 15675381 - 15675009
Alignment:
84 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaac 183  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | |||||| |||| || ||| |||    
15675381 accaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataac 15675282  T
184 atcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaaca 282  Q
    |||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
15675281 atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 15675182  T
283 tggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatca 380  Q
    || ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   |    
15675181 tgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaa 15675082  T
381 aaattcatacaacatttgaaaattcacaaa----atgatgatgattatggtaaagactaacccccttacctta 449  Q
    |||||||||| ||||||||||| |  ||||    ||||||||||||||| | |||||||||||||||||||||    
15675081 aaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 15675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 243 - 449
Target Start/End: Original strand, 122020 - 122226
Alignment:
243 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 342  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||||| |||||||||| |||| |||| |||||||||||||||||||||||||||||     
122020 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 122119  T
343 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaaccccct 442  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||    
122120 agttggagcacaaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatcccct 122219  T
443 tacctta 449  Q
    |||||||    
122220 tacctta 122226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 209 - 375
Target Start/End: Original strand, 10488659 - 10488825
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||||||||| |    
10488659 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 10488758  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
10488759 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 209 - 375
Target Start/End: Complemental strand, 16328092 - 16327926
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||||||||| |    
16328092 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16327993  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
16327992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 84 - 449
Target Start/End: Complemental strand, 10104523 - 10104170
Alignment:
84 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaac 183  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||                   ||||||    
10104523 accaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaac-------------------aacaac 10104443  T
184 atcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaaca 282  Q
    |||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
10104442 atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 10104343  T
283 tggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatca 380  Q
    || ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||  ||   |    
10104342 tgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacggatttagcaacaattatccaattatgaa 10104243  T
381 aaattcatacaacatttgaaaattcacaaa----atgatgatgattatggtaaagactaacccccttacctta 449  Q
    |||||||||| ||||||||||| |   |||    ||||||||||||||| | |||||||||||||||||||||    
10104242 aaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaacccccttacctta 10104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 87 - 348
Target Start/End: Original strand, 31115603 - 31115865
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | |||||| |||| || ||| ||||||    
31115603 aaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatc 31115702  T
187 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatgg 285  Q
    ||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  ||| |||||||| |||||| ||||| |||||| |  ||||||     
31115703 aattgaacatgaatcatatctcaattcaacaacaacttaggaaaattcaccaattgagcataattttcacaacttcacatttttacataatggaacatgt 31115802  T
286 aatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttgg 348  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
31115803 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttgg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 80 - 359
Target Start/End: Original strand, 10644187 - 10644467
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
10644187 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 10644285  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||||||| ||| |||||| | ||||| ||||| |||||  | |  ||||||| | |||| |||||||  |||||||||  ||||| |||||||||    
10644286 taacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatattt 10644385  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
     |||||| ||||| || |||||||||||| |||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
10644386 gaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 10644467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 80 - 375
Target Start/End: Complemental strand, 13048517 - 13048221
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| |||||||||||| | | ||||||||| ||| | ||||||||||| |||||| ||  |||  ||||| || |||  |    
13048517 tttcaccaaaacaccaaca-caactcaaattctcattaactatccatgaatatgcaaacccaagcaattattcattaatcatattatctaataacattca 13048419  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| ||||| |||| | |||||   ||| ||||| |  |  ||||||||| |||  ||||||| |||||||||| || ||| |||||||||    
13048418 taacatcatttgaacaagcatcacatctcaaactaacaacaacttaggagaaattcatcaattgagcacaatattcataacttatcctttttacatattt 13048319  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    ||||||| ||||| ||||||||||||||| | || ||||| |||||||||||||||||||||  ||||||||||| ||||||||||||||| ||||||    
13048318 aaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatacaaacatatcattgaagttggagcatgaatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 363
Target Start/End: Original strand, 47357622 - 47357906
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||  |||||||||||||||||||||||||| ||  |||||||| |||| |||||||||  |||| ||| | || |||  |    
47357622 tttcaccaaaacaccaaca-cagctcaaattctcatcatcaatccatgaatatacatacccaatcaattattcatcaatcataatatcaaataacattca 47357720  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| |||||||||| | ||||| | ||| ||||| |  |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
47357721 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 47357820  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
     |||||| ||||| ||||||||| |||||  ||  |||||| |||||||||||||||| ||||| ||   ||||||||||||||||    
47357821 gaacatgtaatttcaccaacaattatacaactaacatcaatccatgcatacaaacataacatcacagcaagagcacgaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 33240901 - 33241043
Alignment:
313 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaattcacaaa 410  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| |  ||||    
33240901 atcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaa 33241000  T
411 ----atgatgatgattatggtaaagactaacccccttacctta 449  Q
        ||||||||||||||| | |||||||||||||||||||||    
33241001 aatgatgatgatgattatgatgaagactaacccccttacctta 33241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 80 - 211
Target Start/End: Original strand, 111362 - 111493
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||| ||||||||||||||||  ||||||| ||||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | |    
111362 tttcatcaaaacaccaacaacatctcaaattatcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 111461  T
180 caacatcaattgcacaagaatcatagctcaat 211  Q
     ||||||||||| |||||||||||| ||||||    
111462 taacatcaattgaacaagaatcataactcaat 111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 417 - 497
Target Start/End: Complemental strand, 25119139 - 25119059
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
25119139 atgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 25119059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 177 - 359
Target Start/End: Complemental strand, 40885753 - 40885570
Alignment:
177 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacata- 274  Q
    ||||||||||||||| ||| |||||||| ||||||||||| | ||| |  |||| |||| | |||  ||| ||||| ||||||||  ||||| ||||||     
40885753 caacaacatcaattgaacatgaatcatatctcaattcaacaataacttagcaaagttcaccaattgagcataattt-cataacttgacatttatacatac 40885655  T
275 tttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    ||| |||||| ||||| |||||||| ||| || |||| | ||||||||||||||||||||| || || |||||||| ||||||||    
40885654 tttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10488619 - 10488672
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
10488619 atcaactacaatcataacatataatcataccctccatcataattcaacaacaac 10488672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16328132 - 16328079
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
16328132 atcaactacaatcataacatataatcataccctccatcataattcaacaacaac 16328079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 417 - 497
Target Start/End: Complemental strand, 5682460 - 5682380
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| |||| |||||||| ||||||||||||||| ||||||| ||||||  |||||||||| ||||||||| ||||    
5682460 atgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttttgctcctatgattct 5682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 31132545 - 31132657
Alignment:
343 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaattcacaaa----atgatgatgattatggtaaagactaa 436  Q
    |||||||||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| |  ||||    |||||||| |||||| | ||||||||    
31132545 agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgataattatgatgaagactaa 31132644  T
437 cccccttacctta 449  Q
    |||||||||||||    
31132645 cccccttacctta 31132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 449
Target Start/End: Original strand, 7849970 - 7850346
Alignment:
83 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 182  Q
    |||||||||||||||| ||||||||||| |||||| |||| |||||  |||||||| ||||  ||||||||||||| | |   ||  ||| || ||||||    
7849970 caccaaaacaccaaca-caattcaaattttcatcaccaattcatgattatgtatactcaagtcatgattcatcaacaacatactcctttaacaacaacaa 7850068  T
183 catcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa--ttcatccattttgcacaattttcataacttctcatttctacatatttaaa 280  Q
    |||||||   |||  | ||||| ||||||||||| |  || |  ||||  ||||||  ||  ||||||||||||||||||| |||||  ||||| ||  |    
7850069 catcaatgaaacacaattcatatctcaattcaacaatcacttagcaaaatttcatcacttgagcacaattttcataacttcacattttcacataattgga 7850168  T
281 catggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc- 379  Q
    |||  ||||  ||||||||||| ||| || | |||||| ||| ||| |||||||| ||||    |||||||||||||||| || |||| || ||| ||      
7850169 catacaattccaccaacaatcacacagttttcatcaatacattcattcaaacataacatctccattggagcacgaatttaacagcaattatgcattatac 7850268  T
380 -aaaattcatacaacatttgaaaattcaca----aaatgatga---tgattatggtaaagactaacccccttacctta 449  Q
     |||||||||| ||  ||||||  |||| |    | |||||||   |||||||||| |||||||||||||||||||||    
7850269 aaaaattcatataatctttgaattttcaaatgaaagatgatgaacatgattatggtgaagactaacccccttacctta 7850346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 224
Target Start/End: Original strand, 15044794 - 15044938
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatca 178  Q
    |||||||||| || ||||||||||| |  |||||||||||||  |||||   ||| | |||||||| |||| |||||| | | ||||||  |||||| ||    
15044794 tttcaccaaagcaacaacaacaatttat-ttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacatcacttagcaaca 15044892  T
179 acaacatcaattgcacaagaatcatagctcaattcaactacaacat 224  Q
    ||||||||||||| ||| ||||| || | ||||||||| |||||||    
15044893 acaacatcaattgaacatgaatcttatcacaattcaacaacaacat 15044938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 41165865 - 41165808
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||| ||||||||| |||| | ||||| | |||||||||||||||||||    
41165865 ctaacccccttacgttaattatcaccaattcctagcccaagcttcactttagctccta 41165808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 41166172 - 41166083
Alignment:
135 atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 224  Q
    |||||||||| ||||||||||||| | ||||||  |||||| ||||||||||||||| ||| || || |  | ||||||||| |||||||    
41166172 atacccaagccatgattcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttgccacaattcaacaacaacat 41166083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 47534990 - 47534933
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||||| |||| | || || | |||||||||||||||||||    
47534990 ctaacccccttaccttaattatcaccaattcctcgcccaagcttcactttagctccta 47534933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 101
Target Start/End: Original strand, 44055870 - 44055902
Alignment:
69 caattcacaaatttcaccaaaacaccaacaaca 101  Q
    |||||||||||||||||||||||||||||||||    
44055870 caattcacaaatttcaccaaaacaccaacaaca 44055902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 7186068 - 7185981
Alignment:
137 acccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 224  Q
    |||||||| |||| |||||||| |||| |||| |||||| ||||||||||||||  ||| |||||  | | ||||||||| |||||||    
7186068 acccaagccatgaatcatcaacaataatatctcttagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaacat 7185981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 358
Target Start/End: Complemental strand, 13809551 - 13809511
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 358  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
13809551 ttcatgcattcaaacatatcatcataattggagcacgaatt 13809511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 14952085 - 14952117
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
14952085 atgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 15135939 - 15135907
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
15135939 atgattatgataaagactaacccccttacctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 15272243 - 15272211
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
15272243 atgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 327; Significance: 0; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 7292905 - 7293279
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatttcaccaaaacaccaacaac 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
7292905 atcaaccacaatcacaacatataatcatacactccatcataattcaacaacaacttatcatatttcatcaattcacaaatttcaccaaaacaccaacaac 7293004  T
101 aattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaat 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
7293005 aattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat 7293104  T
201 catagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaat 300  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| |||||||||||||||    
7293105 catagctcaattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaat 7293204  T
301 catacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
7293205 catacaattattattaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 68 - 449
Target Start/End: Complemental strand, 13037322 - 13036938
Alignment:
68 tcaattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatc 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||| | ||||||    
13037322 tcaattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatc 13037223  T
168 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatt 266  Q
     ||||  ||  | ||||| ||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||    
13037222 aattaatattcataacattaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatt 13037123  T
267 tctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaaca 366  Q
    | | | ||||| |||||| ||||| | ||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
13037122 tgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaaca 13037023  T
367 atcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    || |||||| ||   ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
13037022 attatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtgaagactaacccccttacctta 13036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 80 - 449
Target Start/End: Original strand, 16211733 - 16212103
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    |||||||||||||||||||||||||||||||||| |||| ||| |||||| ||| ||||||||||||||| |||||||| | |||||| |||| || | |    
16211733 tttcaccaaaacaccaacaacaattcaaattctcttcattaattcatgaatatgcatacccaagcaatgaatcatcaaccacaacatcaattaacaacca 16211832  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||  |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||||||||     
16211833 taacatcaatttaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 16211932  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| || ||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||     
16211933 aacatgcaatttcacaaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattgtccataag 16212032  T
379 caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
16212033 caaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 80 - 490
Target Start/End: Original strand, 3059933 - 3060344
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||| ||||||||| ||||||  ||||||| ||||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| ||   |    
3059933 tttcatcaaaacacccacaacatctcaaattatcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtca 3060032  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccatttt-gcacaattttcataacttctcatttctacatattt 277  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| ||||||  ||| |||||||| || || |||||| |||||||||    
3060033 taacatcaattgaacaagaatcataactcaatctaacaacaacttaacaaaattca-ccatttgagcataattttcacaatttatcatttttacatattt 3060131  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataa 377  Q
     |||||| ||||| ||||||| |  |||| |||| ||||||| ||||||||||| |||| |||| |||||||||||||||||||||||||| ||||||||    
3060132 gaacatgtaatttcaccaacagtattacaattatcatcaattaatgcatacaaatatattatcacagttggagcacgaatttagcaacaattatccataa 3060231  T
378 tcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttc 477  Q
     ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||| |||||||||||||    
3060232 gcaaaattcatataacatttgaaaatttacaaaatgatgatgattatgataaagacttacccccttaccttcattatctccaactattagctctagcttc 3060331  T
478 actttagctccta 490  Q
    ||||| |||||||    
3060332 acttttgctccta 3060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 80 - 449
Target Start/End: Complemental strand, 11581035 - 11580661
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    |||||||||||||||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||||||| | |||||| |||| || | |    
11581035 tttcaccaaaacaccaacaacaattcaaattctcgtcctcaattcatgaatatgtatacccaagcaatgattcatcaaccacaacatcaattaacagcca 11580936  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | |||||     
11580935 taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttg 11580836  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| |||||| ||    
11580835 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaataattatccattat 11580736  T
379 ---caaaattcatacaacatttgaaaattcac-aaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
        ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||| ||||||||||||    
11580735 gcaaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaagactaatccccttacctta 11580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 80 - 449
Target Start/End: Original strand, 36052634 - 36053003
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||| | |||||| |||| || | |    
36052634 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca 36052733  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
    |||||||||||| |||||||||| | ||||| | |||   ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||||||||     
36052734 caacatcaattgaacaagaatcaaatctcaaattaac---aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 36052830  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| ||||||||||||| | |||| |||||||||||||||||||| |||||||| |||||||| |  |||||||||||||| |||||| ||    
36052831 aacatgtaattttaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcacagttggagtataaatttagcaacaattatccattat 36052930  T
379 --caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
       |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
36052931 acaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 209 - 375
Target Start/End: Original strand, 11516324 - 11516490
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
11516324 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 11516423  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
11516424 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 209 - 375
Target Start/End: Complemental strand, 15441730 - 15441564
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
15441730 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 15441631  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
15441630 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 209 - 375
Target Start/End: Complemental strand, 30262295 - 30262129
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
30262295 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 30262196  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
30262195 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 87 - 375
Target Start/End: Complemental strand, 47481320 - 47481031
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    |||||||||||||||||||||||| ||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| ||||  | | | ||||||    
47481320 aaaacaccaacaacaattcaaattatcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatc 47481221  T
187 aattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatgg 285  Q
    ||||| |||||||||||| ||||||||||| ||||| |  |||| |||| | |||   ||||||||||| ||||| |||||| ||||||||| ||||||     
47481220 aattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgt 47481121  T
286 aatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    ||||| || |||||||||||| |||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||    
47481120 aatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 80 - 368
Target Start/End: Complemental strand, 18254130 - 18253842
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||| || ||||| |||||||||  | |||||| |||| |||| |    
18254130 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatcca 18254032  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||| ||||     
18254031 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg 18253932  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 368  Q
    |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
18253931 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 18253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 87 - 374
Target Start/End: Original strand, 13320988 - 13321278
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    ||||||||||||||||| |||||||||||||||||| ||||||  || | |||||||  ||||||||||||| | |||||| |||| || ||| ||||||    
13320988 aaaacaccaacaacaatccaaattctcatcatcaattcatgaatgtgcaaacccaagtcatgattcatcaacaacaacatcaattaacaacaataacatc 13321087  T
187 aattgcacaagaatcatagctcaattcaacta-caacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattt--aaaca 282  Q
    ||||| ||| |||||||| ||||||||||| | |||| |  |||| |||| | |||  ||||||||| ||||||||  ||||| |||||| ||  |||||    
13321088 aattgaacatgaatcatatctcaattcaacaatcaacttagcaaaattcaccaattgagcacaattt-cataacttgacatttatacatactttgaaaca 13321186  T
283 tggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca 374  Q
    || ||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| |||||    
13321187 tgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 83 - 357
Target Start/End: Complemental strand, 16479244 - 16478968
Alignment:
83 caccaaaacaccaacaacaattcaaa-ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 181  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| |    
16479244 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaata 16479145  T
182 acatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaa 280  Q
    ||||||||||  ||||||||| | ||||| | ||  | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| ||    
16479144 acatcaattgagcaagaatcaaatctcaaattaaaaataacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaa 16479045  T
281 catggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaat 357  Q
    |||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||  |||  ||||||||||    
16479044 catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcgcagtaagagcacgaat 16478968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 80 - 375
Target Start/End: Complemental strand, 25292633 - 25292338
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| |||||||||||| | ||||||||||| ||| | ||||||||||| |||||| |   |||| ||| | || |||  |    
25292633 tttcaccaaaacaccaaca-caactcaaattctcattaacaatccatgaatatgcaaacccaagcaattattcattagtcataatatcaaataacattca 25292535  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtca-aattcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |   | |||||| | |||  ||||||| |||||| ||| || ||| ||||||||||    
25292534 taacatcatttgaacaagcatcacatctcaaattaacgacaacctaggagaattcaccaattgagcacaatattcatagcttatcctttttacatattta 25292435  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||| ||||| ||||||||||||||| | || | |||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||    
25292434 aacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaaagttggagcacaaatttagcaacaattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 363
Target Start/End: Original strand, 10989378 - 10989661
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
10989378 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 10989476  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| |||||||||| | ||||| |  || |||||  | |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| |    
10989477 taacatcatttgaacaagaatcacaactcaaat-tacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat 10989575  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
     |||||| ||||| |||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
10989576 gaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 359
Target Start/End: Original strand, 13572644 - 13572924
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| | ||||||||||| |||||| ||  |||| ||| | || |||  |    
13572644 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca 13572742  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||    
13572743 taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt 13572842  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    ||||||| ||||| ||||||||||| ||| | || ||||||||||||||||||||||| ||||| ||   ||||||||||||    
13572843 aaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 13572924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 98 - 363
Target Start/End: Complemental strand, 13911292 - 13911024
Alignment:
98 aacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaag 197  Q
    |||||||||||||||||||||||||||||||| ||| | ||||||| ||| |||||||||  |||| ||| | || |||  | ||||||||||| ||| |    
13911292 aacaattcaaattctcatcatcaatccatgaatatgcaaacccaagaaattattcatcaatcataatatcaaataacattcataacatcaattgaacatg 13911193  T
198 aatcatagctcaattcaactacaacat---gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaacc 294  Q
    ||||| | ||||| ||||| ||||| |   |  ||||||| | |||  ||| ||| |||||||||| |||||| | ||||| | |||||| ||||| |||    
13911192 aatcacatctcaaatcaacaacaactttaggagaaattcaccaattgagcataatattcataacttatcatttttgcatatatgaacatgtaatttcacc 13911093  T
295 aacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
    |||||||||||| |||  ||||||||||||||||||||||| ||||| |    ||||||||||||||||    
13911092 aacaatcatacaattaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagca 13911024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 80 - 364
Target Start/End: Original strand, 2437425 - 2437710
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | || |||||||| |||||||||  |||| ||| | || |||  |    
2437425 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaactcaagcaattattcatcaatcataatatcaaataacattca 2437523  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| |||||||||| | ||||  | ||| ||||| |  |  ||||||| | |||   |||||| |||||||||| |||||| | ||||| |    
2437524 taacatcatttgaacaagaatcaaatctcatattaacaacaacttaggaaaaattcaccaattgaacacaatcttcataacttatcatttttgcatatat 2437623  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaa 364  Q
     |||||| ||||| |||||||||||||||  ||  ||||||||||||||||||||||| ||||| |    |||||||||||||||||    
2437624 gaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcaa 2437710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 83 - 447
Target Start/End: Complemental strand, 296257 - 295893
Alignment:
83 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 182  Q
    ||||||||||||||||  ||||||| || ||| |||||||||||||| | | |||||||| || | ||||||||||   |||||| ||||  | ||||||    
296257 caccaaaacaccaacacaaattcaatttttcaacatcaatccatgaataagcatacccaatcagtaattcatcaac---aacatcaattaatagcaacaa 296161  T
183 catcaattgcacaagaatcatagctcaattcaacta-caacatgtcaaa-ttcatccattttgc-acaattttcataacttctcatttctacatatttaa 279  Q
    ||||||||| ||| |||||| | | ||||||||  | |||  |  |||| |||| |||||| |  | |||||| |||||||||||||| |||||| || |    
296160 catcaattgaacatgaatcacaacacaattcaaacatcaatttagcaaaattca-ccatttggatataatttttataacttctcatttttacataattca 296062  T
280 acatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat- 378  Q
    ||||| ||||| |||||||||||||   |||| ||| ||||||||| ||||||||| || |  | || || |||||||||||||||||| || ||| ||     
296061 acatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaattagaacacgaatttagcaacaattattcattatg 295962  T
379 caaaa-ttcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacct 447  Q
    ||||| |||||||||  ||||||||| || ||||||||||  |||||| | ||||| |||||||||||||    
295961 caaaatttcatacaaagtttgaaaatgca-aaaatgatgagaattatgttgaagacaaacccccttacct 295893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 417 - 497
Target Start/End: Complemental strand, 32493978 - 32493898
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
32493978 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 32493898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15441770 - 15441717
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
15441770 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 15441717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30262335 - 30262282
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
30262335 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 30262282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 417 - 497
Target Start/End: Original strand, 126738 - 126818
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||| ||||    
126738 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttcatttttgctcctatgattct 126818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11516284 - 11516337
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
11516284 atcaaccacaatcataacatatactcatacactccatcataattcaacaacaac 11516337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 417 - 497
Target Start/End: Complemental strand, 1936949 - 1936869
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| |||| ||||||| |||||||||||||||||||||||| || ||||||||||||||| ||| ||||| ||||    
1936949 atgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttttgcttctatgattct 1936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 417 - 497
Target Start/End: Complemental strand, 111201 - 111121
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| | || |||||||||||||||||||||||| ||||||  |||||| ||||||||||| ||||||||| ||||    
111201 atgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttttgctcctatgattct 111121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 497
Target Start/End: Complemental strand, 7283987 - 7283908
Alignment:
418 tgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    |||||||| | || |||||||||||||||||||||||| |||| || || ||| ||||||||||| ||||||||| ||||    
7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcctatgattct 7283908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 333 - 375
Target Start/End: Complemental strand, 14114031 - 14113989
Alignment:
333 atatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
14114031 atatcatcaaagttggagcacgaatttagcaacaattatccat 14113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 333 - 375
Target Start/End: Complemental strand, 14423681 - 14423639
Alignment:
333 atatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
14423681 atatcatcaaagttggagcacgaatttagcaacaattatccat 14423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 490
Target Start/End: Original strand, 13377867 - 13377924
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
13377867 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13377924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 490
Target Start/End: Original strand, 13389693 - 13389750
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13389750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 15822723 - 15822691
Alignment:
69 caattcacaaatttcaccaaaacaccaacaaca 101  Q
    |||||||||||||||||||||||||||||||||    
15822723 caattcacaaatttcaccaaaacaccaacaaca 15822691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 434 - 490
Target Start/End: Original strand, 16919870 - 16919926
Alignment:
434 taacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||||    
16919870 taacccccttatcttaattatcaccaattcctagcccaagcttcactttagctccta 16919926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 16915009 - 16914928
Alignment:
279 aacatggaatttaaccaacaatcatacacttattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    |||||| ||||| ||||||||  || || |||| ||||||| ||||||| |||||||||||||| | || ||||||||||||    
16915009 aacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataattagagcacgaattt 16914928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 2029244 - 2029276
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
2029244 atgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 224
Target Start/End: Complemental strand, 17224230 - 17224075
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatc 167  Q
    |||||||| ||||| || ||| |||||||||||| |||  ||||||||| |||  ||||||  ||| |||||||||| |||| ||||||   | ||||||    
17224230 caattcaccaattttacaaaaccaccaacaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcattaacaacatc 17224132  T
168 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 224  Q
      |||||| ||||||||||||||| ||| || || ||   ||||||||| |||||||    
17224131 acttagcaacaacaacatcaattgaacatgactcttacaacaattcaacaacaacat 17224075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 42056220 - 42056188
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
42056220 atgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 323; Significance: 0; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 1 - 375
Target Start/End: Complemental strand, 37440 - 37066
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatttcaccaaaacaccaacaac 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
37440 atcaaccacaatcacaacatataatcatacactccatcataattcaacaaaaacttatcatatttcatcaattcacaaatttcaccaaaacaccaacaac 37341  T
101 aattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaat 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
37340 aattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaat 37241  T
201 catagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaat 300  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| |||||||||||||||    
37240 catagctcaatccaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaat 37141  T
301 catacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
37140 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 417 - 497
Target Start/End: Original strand, 41632 - 41712
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    |||||| || |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
41632 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 41712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 83 - 500
Target Start/End: Original strand, 41394191 - 41394610
Alignment:
83 caccaaaacaccaacaacaattcaaa-ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 181  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| ||| |||||||| || |||||||||||| | |||||| | || || ||| |    
41394191 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaatcagtgattcatcaacaacaacatcaaataacaacaata 41394290  T
182 acatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaa 280  Q
    ||||||||||  ||||||||| | |||||   ||| | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| ||    
41394291 acatcaattgagcaagaatcaaatctcaacataacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaa 41394390  T
281 catggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatca 380  Q
    |||| || || ||||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
41394391 catgtaacttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataatca 41394490  T
381 aaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcact 480  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
41394491 aaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcact 41394590  T
481 ttagctcctatgcttctcca 500  Q
    |||||||||||| |||||||    
41394591 ttagctcctatgattctcca 41394610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 80 - 449
Target Start/End: Original strand, 20445646 - 20446019
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | |    
20445646 tttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagcca 20445745  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     |||||||||||  ||||||||||| | ||||||||| ||||| | |  ||||||| | |||  ||||||||||||  |||| |||||| | | || ||     
20445746 taacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttg 20445845  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||    
20445846 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattat 20445945  T
379 --caaaattcatacaacatttgaaaa-ttcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
       ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||    
20445946 gcaaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaactcccttacctta 20446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 80 - 449
Target Start/End: Original strand, 20931312 - 20931682
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||| ||| ||||||||| ||| |||||||||| | |||||| |||| || | |    
20931312 tttcaccaaaacaccaacaacaattcaaattctcatcattaattcatgaatatgcatacccaagaaattattcatcaaccacaacatcaattaacaacca 20931411  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||  |  |||| |||| | |||| |||||||||||||||||| |||||| ||||||| |     
20931412 taacatcaattgaacaagaatcaaatctcaaattaacaacaatttagcaaaattcaccaatttagcacaattttcataacttatcatttttacatatatg 20931511  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||     
20931512 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataag 20931611  T
379 caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    |||| ||||||||||| |||||||||  |||||||| |||||||||| ||||| |||||||||||||||||    
20931612 caaacttcatacaacaattgaaaatttgcaaaatgaggatgattatgataaaggctaacccccttacctta 20931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 80 - 449
Target Start/End: Original strand, 20531411 - 20531783
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | |    
20531411 tttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagcca 20531510  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     |||||||||||  ||||||||||| | ||||||||| ||||| | |  ||||||| | |||  ||||||||||||  |||| |||||| | | || ||     
20531511 taacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttg 20531610  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||| | |||||||||||||||||||||||| |||||| ||    
20531611 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccattat 20531710  T
379 --caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
       |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   ||||||||||    
20531711 gcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaatttccttacctta 20531783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 69 - 449
Target Start/End: Complemental strand, 20893933 - 20893551
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 168  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||  ||||| ||| |||||||| ||||||||||||||| | ||||||     
20893933 caattcacaaatttcttcaaaacaccaacaacaattcaaattctcatcatcaatttatgaatatgcatacccaaacaatgattcatcaaccacaacatca 20893834  T
169 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcattt 267  Q
    |||| ||   | ||||||||||| ||||||||||||  |||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| ||||||    
20893833 attaacagtcataacatcaattgaacaagaatcataaatcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 20893734  T
268 ctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaa 367  Q
     | | ||||| |||||| ||||| | ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
20893733 gttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcaagaatttagcaacaa 20893634  T
368 tcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    | |||||| ||   ||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||    
20893633 ttatccattatgcaaaaattcatacaacatttgaaaatt-acaaaatgatgatgattatgatgaagactaacccccttacctta 20893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 80 - 449
Target Start/End: Original strand, 20913004 - 20913367
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||| | || ||| |||| || | |    
20913004 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaagatcaattaacaacca 20913103  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| ||||||||||      |||| ||| ||||| |  |||| |||| | |||  |||||||||||||||||| |||||| ||||||| |     
20913104 taacatcaattgaacaagaatca------aatt-aacaacaactttgcaaaattcaccaattgagcacaattttcataacttatcatttttacatatatg 20913196  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||     
20913197 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccgtaag 20913296  T
379 caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    |||||||||||||||| |||||||||  |||||||| |||||||| | |||||||||||||||||||||||    
20913297 caaaattcatacaacaattgaaaatttgcaaaatgaggatgattacgataaagactaacccccttacctta 20913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 80 - 449
Target Start/End: Complemental strand, 37844746 - 37844374
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||| |||||||||||||||| |||||||||||||| ||||| |||||| ||| ||||||||||||||| |||||||| | |||||| |||| || | |    
37844746 tttcatcaaaacaccaacaaca-ttcaaattctcatcctcaattcatgaatatgcatacccaagcaatgactcatcaaccacaacatcaattaacaacca 37844648  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttca-taacttctcatttctacatattt 277  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||||  |||  |||||||||||| ||  || |||||| | | || ||    
37844647 taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcattaattgagcacaattttcactattttatcatttgttcctactt 37844548  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataa 377  Q
     |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| |    
37844547 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccatta 37844448  T
378 t--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    |   |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
37844447 tgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 209 - 375
Target Start/End: Original strand, 51452589 - 51452755
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
51452589 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 51452688  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
51452689 tattatcaattcatgcatacaaacatatcatcaaagttgaagcacgaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 87 - 363
Target Start/End: Original strand, 2116228 - 2116506
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||    
2116228 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 2116327  T
187 aattgcacaagaatc-atagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 284  Q
    |||||  |||||||| | |  |||| | ||| | ||| | |  ||||||| | |||  |||| ||||||| ||||| |||||| ||||||||| ||||||    
2116328 aattgagcaagaatcaaaatatcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatg 2116427  T
285 gaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
     ||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||   ||||||||| |||||    
2116428 taatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaaaagcacgaatctagca 2116506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 80 - 448
Target Start/End: Original strand, 22227777 - 22228146
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||||||  |||||||| |||| |||  |    
22227777 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattca 22227875  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||   ||||||||||||||||| |||||| |||||||||     
22227876 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttg 22227975  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aa 377  Q
    |||||| ||||| || |||||||||||| |||| ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||| |||  | ||| ||    
22227976 aacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaa 22228075  T
378 tcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctt 448  Q
     | |  ||||||||||||  |||||| || ||| ||   ||||||||| |||  |||||||||||||||||    
22228076 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctt 22228146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 80 - 448
Target Start/End: Original strand, 22232474 - 22232843
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||||||  |||||||| |||| |||  |    
22232474 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattca 22232572  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||   ||||||||||||||||| |||||| |||||||||     
22232573 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttg 22232672  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aa 377  Q
    |||||| ||||| || |||||||||||| |||| ||||||||||||| |  || ||| ||||| ||   ||||||||||||||||| |||  | ||| ||    
22232673 aacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaa 22232772  T
378 tcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctt 448  Q
     | |  ||||||||||||  |||||| || ||| ||   ||||||||| |||  |||||||||||||||||    
22232773 cccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataactaacccccttacctt 22232843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 80 - 363
Target Start/End: Complemental strand, 5072672 - 5072388
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| || ||||||||||||||||||||||| ||| | ||||||||||| |||||| ||  |||  ||| | || |||  |    
5072672 tttcaccaaaacaccaaca-caactctaattctcatcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattca 5072574  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| |    
5072573 taacatcatttgaacaagcatcacatctcaacttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat 5072474  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
     |||||| ||||| |||||||||||||||  ||  ||||||||||||||| ||||||| ||||| ||   ||||||||||||||||    
5072473 gaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcacagcaagagcacgaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 80 - 363
Target Start/End: Complemental strand, 18601402 - 18601118
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| || ||||||||||||||||||||||| ||| | ||||||||||| |||||| ||  |||  ||| | || |||  |    
18601402 tttcaccaaaacaccaaca-caactctaattctcatcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattca 18601304  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| |    
18601303 taacatcatttgaacaagcatcacatctcaacttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat 18601204  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
     |||||| ||||| |||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||   ||||| ||||||||||    
18601203 gaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcatgaatttagca 18601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 87 - 450
Target Start/End: Original strand, 45051416 - 45051759
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||| |||||||||||| ||||                   ||||    
45051416 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaataa-------------------catc 45051496  T
187 aattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatgg 285  Q
    |||||  ||||||||| | ||||| | ||| | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| ||||||     
45051497 aattgagcaagaatcaaatctcaaattaaccataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgt 45051596  T
286 aatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaat 384  Q
    ||||| ||||||||||||||| |||| |||||||||||||||||||| || ||||| |||  || ||||||| |||||  |||  | ||| || | |  |    
45051597 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagtaagaacacgaatctagcatgaattgttcatcaacccattt 45051696  T
385 tcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttaccttaa 450  Q
    |||||||||||  ||||||   |||||| |  ||||||||| ||||||||||||||||||||||||    
45051697 tcatacaacatgagaaaat--gcaaaatca-catgattatgataaagactaacccccttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 417 - 497
Target Start/End: Original strand, 21860334 - 21860414
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
21860334 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 21860414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 417 - 491
Target Start/End: Complemental strand, 44034903 - 44034829
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 491  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
44034903 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 44034829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 51452549 - 51452602
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
51452549 atcaactacaatcataacatataatcatacactccatcataattcaacaacaac 51452602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 432 - 497
Target Start/End: Original strand, 41218743 - 41218808
Alignment:
432 actaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
41218743 actaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 41218808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 419 - 490
Target Start/End: Original strand, 27675120 - 27675191
Alignment:
419 gattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||| ||||  |||||||||||||||||||||||||||| | ||||| | |||||||||||||||||||    
27675120 gattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcactttagctccta 27675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 13376768 - 13376711
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||||| |||| | ||||| | | |||||||||||||||||    
13376768 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 13376711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 490
Target Start/End: Original strand, 20177513 - 20177570
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    |||||||| |||||||||||||| |||| | ||||| | |||||||||||||||||||    
20177513 ctaaccccattaccttaattatcaccaattcctagcccaagcttcactttagctccta 20177570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 49967607 - 49967638
Alignment:
70 aattcacaaatttcaccaaaacaccaacaaca 101  Q
    ||||||||||||||||||||||||||||||||    
49967607 aattcacaaatttcaccaaaacaccaacaaca 49967638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 22143402 - 22143361
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    |||||||||||||||| ||||||| |||| ||||||||||||    
22143402 ttcatgcatacaaacacatcatcatagttagagcacgaattt 22143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 69 - 497
Target Start/End: Complemental strand, 19795011 - 19794581
Alignment:
69 caattcacaaatttcaccaaaa-caccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatc 167  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
19795011 caattcacaa-tttcaccaaaaacaccaacaaaaattcaaattctcatcatcaatccatgaatatgcatacccaagcaatgattcatcaactataacatc 19794913  T
168 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatt 266  Q
     |||| |   || ||||||||||| |||||||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||    
19794912 aattaacggaaataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatt 19794813  T
267 tctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaaca 366  Q
    | | | ||||| |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||    
19794812 tgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacgaca 19794713  T
367 atcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttaccttaattatctccaactac 464  Q
    || |||||| ||   ||||||||||||||||||| ||||| ||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||     
19794712 attatccattatgcaaaaattcatacaacatttg-aaatttacaaaataatgatgattatgatgaagactaacccccttaccttaattatctccaactat 19794614  T
465 tagctctagcttcactttagctcctatgcttct 497  Q
    |||||||||||||||||| |||| |||| ||||    
19794613 tagctctagcttcacttttgctcttatgattct 19794581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 80 - 449
Target Start/End: Complemental strand, 36982737 - 36982364
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||| | |||||| |||| || |||    
36982737 tttcactaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaa 36982638  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| ||| |||||||| ||||||||||| ||||| || |||| |||| | |||  |||||||||||| ||||| |||||| |||||||||     
36982637 taacatcaattgaacaggaatcataactcaattcaacaacaacttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 36982538  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| |||| ||||| |||| |||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| ||    
36982537 aacatgtaatttcaccagcaatcttacaattatcatcaattcatgaatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattat 36982438  T
379 --caaaattcatacaacatttgaaaattcac-aaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
       ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||    
36982437 gcaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaagactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 80 - 497
Target Start/End: Complemental strand, 20627609 - 20627190
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||| ||||||||||||||||  ||||||| ||||| ||||| |||||| ||  |||||||||||||||||||||||| | |||| | |||| || | |    
20627609 tttcatcaaaacaccaacaacatctcaaattatcatcctcaattcatgaatatccatacccaagcaatgattcatcaaccacaacaccaattaacaacca 20627510  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     || |||||||| |||||||| | | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||||| |||||||||     
20627509 taaaatcaattgaacaagaattaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaagttatcatttttacatatttg 20627410  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
     ||||| ||||| ||||||||||||||| |||| |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||    
20627409 gacatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccataat 20627310  T
379 caaaattcatacaacatttgaaaa-ttcacaaaatgatgatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttc 477  Q
    || ||||||||||| ||||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||    
20627309 cataattcatacaatatttgaaaattttacaaaatgatgatgattatgataaagactaaccccgttaccttaattatctccaactattagctctagcttc 20627210  T
478 actttagctcctatgcttct 497  Q
    ||||| ||||||||| ||||    
20627209 acttttgctcctatgattct 20627190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 80 - 497
Target Start/End: Complemental strand, 43643250 - 43642833
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||| ||||||||||||| |   ||||||| ||||||||||| |||||| ||| ||||||||||| |||||||||||||| |||||| |||| || |||    
43643250 tttcatcaaaacaccaacatc---tcaaattatcatcatcaattcatgaatatgcatacccaagcagtgattcatcaactacaacatcaattaacagcaa 43643154  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac-atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     | ||||||||| |||||||||||| ||||| | ||  ||||| | |  ||||||| | |||  |||||||||||| |||||  ||||| | | |||||     
43643153 tagcatcaattgaacaagaatcatatctcaaattaataacaactaagaaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttg 43643054  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||  ||    
43643053 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacaaatttagcaacaattatccactat 43642954  T
379 --caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagctt 476  Q
       |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||| ||||||||||||    
43642953 gcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacctccttcccttaattatctccaactattagctctagctt 43642854  T
477 cactttagctcctatgcttct 497  Q
    |||||| ||||||||| ||||    
43642853 cacttttgctcctatgattct 43642833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 80 - 449
Target Start/End: Original strand, 462706 - 463075
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||| |||||||||||||||| |||||||||| ||| ||||| |||||| ||| |||||||||||||||||||||||  |  ||||| |||| || | |    
462706 tttcatcaaaacaccaacaaca-ttcaaattcttatcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacgacatcaattaacagcca 462804  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||   ||||||||||| ||||| |||||| |||||||||     
462805 taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttg 462904  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| |||||||||| |||| |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||     
462905 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccataag 463004  T
379 caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
463005 caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 80 - 449
Target Start/End: Original strand, 8891209 - 8891581
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| ||||  | | |    
8891209 tttcaccaaaacaccaacaaccattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagcca 8891308  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | |||||     
8891309 taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttg 8891408  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| |||||  |||||||||||||| |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| ||    
8891409 aacatgtaatttcgccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaacaattatccattat 8891508  T
379 --caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
       ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||    
8891509 gcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccctttacctta 8891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 84 - 449
Target Start/End: Complemental strand, 24341681 - 24341309
Alignment:
84 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaac 183  Q
    |||||||||||||||| |||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||   |||||| |||| || ||| |||    
24341681 accaaaacaccaacaataattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataac 24341582  T
184 atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaaca 282  Q
    |||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
24341581 atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 24341482  T
283 tggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatca 380  Q
    |  ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| |||||  ||   |    
24341481 tataatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcatgaatttagcaacaattatccaattatgaa 24341382  T
381 aaattcatacaacatttgaaaattcacaaa----atgatgatgattatggtaaagactaacccccttacctta 449  Q
    |||||||||| ||||||||||| |  ||||    ||||||||||||||| | |||||||||||||||||||||    
24341381 aaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 24341309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 209 - 375
Target Start/End: Complemental strand, 19689567 - 19689401
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
19689567 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 19689468  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
19689467 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 209 - 375
Target Start/End: Original strand, 23820168 - 23820334
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
23820168 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 23820267  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
23820268 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 209 - 375
Target Start/End: Complemental strand, 14906606 - 14906440
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||||||||| |    
14906606 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 14906507  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
14906506 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 87 - 375
Target Start/End: Complemental strand, 25265679 - 25265390
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||| ||| | |||||| |||| || ||||||||||    
25265679 aaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatc 25265580  T
187 aattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatgg 285  Q
    ||||| ||| |  ||  | |  |||||||| |||||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || ||||||     
25265579 aattgaacatggttctcatcataattcaacaacaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgt 25265480  T
286 aatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||    
25265479 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 209 - 375
Target Start/End: Original strand, 20015108 - 20015274
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||||| ||| |    
20015108 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaat 20015207  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
20015208 tattatcaattcatgcatgcaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 80 - 375
Target Start/End: Complemental strand, 17396948 - 17396653
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| | ||||||||||| || ||| ||  |||| ||| | || |||  |    
17396948 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattatccattaatcataatatcaaataacattca 17396850  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| ||||| |||| | ||||| | ||  ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| ||| |||||    
17396849 taacatcatttgaacaagcatcacatctcaaattaatgacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacttattt 17396750  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    ||||||| ||||| ||||||||||||||| | || | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
17396749 aaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcacgaatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 83 - 325
Target Start/End: Complemental strand, 7508138 - 7507894
Alignment:
83 caccaaaacaccaacaacaattcaaa-ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 181  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| |    
7508138 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaata 7508039  T
182 acatcaatt-gcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaa 279  Q
    |||||||||   ||| |||||||| ||||||| ||| ||||| | | |||||||| | |||   ||||||||||||||||| | |||| ||||||||| |    
7508038 acatcaattaaaacatgaatcatatctcaatt-aacaacaacttagccaaattcaccaattgaacacaattttcataacttattatttttacatatttga 7507940  T
280 acatggaatttaaccaacaatcatacacttattatcaattcatgca 325  Q
    ||||| ||||| ||||||||||||||| |||| |||||||||||||    
7507939 acatgtaatttcaccaacaatcatacaattatcatcaattcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 80 - 363
Target Start/End: Complemental strand, 19886945 - 19886661
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
19886945 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 19886847  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| |  ||| ||||||| |||||||||| ||| || | ||||| |    
19886846 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatat 19886747  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
     |||||| ||||| ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
19886746 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 353 - 449
Target Start/End: Original strand, 22863169 - 22863267
Alignment:
353 cgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    |||||||||||||||| |||||| ||   ||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
22863169 cgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 417 - 497
Target Start/End: Original strand, 22275045 - 22275125
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
22275045 atgattatgataaaggctaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 22275125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 417 - 497
Target Start/End: Original strand, 22284278 - 22284358
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
22284278 atgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 22284358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 418 - 497
Target Start/End: Original strand, 15633538 - 15633617
Alignment:
418 tgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    |||||||| |||||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||||| ||||    
15633538 tgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcctatgattct 15633617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 19689600 - 19689554
Alignment:
8 acaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
19689600 acaatcataacatataatcatacactccatcataattcaacaacaac 19689554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14906646 - 14906593
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
14906646 atcaactacaatcataacatataatcataccctccatcataattcaacaacaac 14906593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20015068 - 20015121
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
20015068 atcaactacaatcataacatataatcataccctccatcataattcaacaacaac 20015121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23820128 - 23820181
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
23820128 atcaactacaatcataacatataatcataccctccatcataattcaacaacaac 23820181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 490
Target Start/End: Original strand, 43646232 - 43646289
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 43646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 17396599 - 17396567
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    |||||||||||||||||||||||||||||||||    
17396599 atgattatggtaaagactaacccccttacctta 17396567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 438 - 490
Target Start/End: Original strand, 19660221 - 19660273
Alignment:
438 ccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    |||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
19660221 ccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 19660273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 19669335 - 19669279
Alignment:
135 atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattg 191  Q
    |||||||||| |||| |||||||| ||||||||  |||||| |||||||||||||||    
19669335 atacccaagccatgaatcatcaacaataacatcacttagcaacaacaacatcaattg 19669279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 450
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
417 atgattatggtaaagactaacccccttaccttaa 450  Q
    ||||||||| ||||||||||||||||||||||||    
19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 490
Target Start/End: Original strand, 25305769 - 25305826
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||||| |||| |  |||| | |||||||||||| ||||||    
25305769 ctaacccccttaccttaattatcaccaattcatagcccaagcttcactttaactccta 25305826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 9652828 - 9652796
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
9652828 atgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 101
Target Start/End: Original strand, 32465813 - 32465845
Alignment:
69 caattcacaaatttcaccaaaacaccaacaaca 101  Q
    ||||||| |||||||||||||||||||||||||    
32465813 caattcataaatttcaccaaaacaccaacaaca 32465845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 204; Significance: 1e-111; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 80 - 449
Target Start/End: Original strand, 1091 - 1462
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| | ||||||||||| |||||||||| | || ||| |||| || | |    
1091 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcacacccaagcaattattcatcaaccacaatatcaattaacaacca 1190  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||||||||     
1191 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 1290  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||     
1291 aacatgtaatttcaccaacaatcatacaattattatcaattcatgcatactaacatatcatcaaagttggagcacgaatttagcaacaattatccataag 1390  T
379 caaaattcatacaacatttgaaaa-ttcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
     ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
1391 aaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 80 - 449
Target Start/End: Complemental strand, 3877 - 3508
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||||| || ||| ||||||||||||| |||| ||||  | |||||| |||| |||| |    
3877 tttcaccaaaacaccaaca-caattcaaactctcctcatcaatccatcaatatgcatacccaagcaattattcctcaatcacaacatcaattaacatcca 3779  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| || | | |||  |||||||||||| ||||| |||||| |||||||||     
3778 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttttacatatttg 3679  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
3678 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatctataat 3579  T
379 caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||||  ||||||||||||||||||||||    
3578 caaaattcatacaacttttgaaaatttacaaaatgaagatgattatgacaaagactaacccccttacctta 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 203; Significance: 1e-110; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 80 - 449
Target Start/End: Original strand, 48565 - 48935
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| ||||  | | |    
48565 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagcca 48664  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||||| ||||||  | | ||||| |  |||| |||| | | |  |||||||||||| ||||| |||||| | | |||||     
48665 taacatcaattgaacaagaatcataactcaatctagcaacaacttagcaaaattcaccaactgagcacaattttcacaacttatcattttttcctatttg 48764  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||     
48765 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataag 48864  T
379 caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
48865 caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 84 - 341
Target Start/End: Original strand, 36065 - 36323
Alignment:
84 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaac 183  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||| |||||||||  |||  ||| | || |||  | |||    
36065 accataacaccaaca-caattcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcatattatcaaataacattcataac 36163  T
184 atcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaac 281  Q
    ||| |||| ||| |||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | ||     
36164 atctattgaacatgaatcacatctcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaat 36263  T
282 atggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 341  Q
    ||| ||||| |||||||||||||||  ||  |||||||||| |||||||||||| |||||    
36264 atgtaatttcaccaacaatcatacaactaacatcaattcatacatacaaacataacatca 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 199; Significance: 1e-108; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 80 - 450
Target Start/End: Complemental strand, 37209 - 36836
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | |    
37209 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagcca 37110  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||| ||||||| |||||| ||||| |||||| |||| ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| |||||||||     
37109 taacgtcaattgaacaagattcataactcaatccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttttacatatttg 37010  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| |||||||| | |||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||    
37009 aacatgtaatttcaccaacaagcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccattat 36910  T
379 --caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttaccttaa 450  Q
       |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
36909 gcaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttaccttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 433 - 497
Target Start/End: Complemental strand, 15383 - 15319
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||||| ||||    
15383 ctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcctatgattct 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 193; Significance: 1e-104; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 69 - 449
Target Start/End: Original strand, 23153403 - 23153786
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||| ||||||||||||| |||||||||||||| | ||||||     
23153403 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatccttaattcatgaatatgtatacccaagtaatgattcatcaaccacaacatca 23153502  T
169 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcattt 267  Q
    |||| || | | || |||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| ||||||    
23153503 attaacagccataatatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 23153602  T
268 ctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaa 367  Q
     | | ||||| |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
23153603 gttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagaaacaa 23153702  T
368 tcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    | |||||| ||   ||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||    
23153703 ttatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 87 - 448
Target Start/End: Complemental strand, 14626407 - 14626045
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||    
14626407 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 14626308  T
187 aattgcacaagaatcatagctcaattcaactacaacatgtca-aattcatccattttgcacaattttcataacttctcatttctacatatttaaacatgg 285  Q
    |||||  ||||||||| | ||||| | ||| ||||| |  || |||||| | |||   ||||||||||||||||| |||||| ||||||||| ||||||     
14626307 aattgagcaagaatcaaatctcaagttaacaacaacttagcataattcaccaattgcacacaattttcataacttatcatttttacatatttgaacatgt 14626208  T
286 aatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaatt 385  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||| ||   ||||||||||||||||| ||| ||||||||||| ||||    
14626207 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcaataattatccataatcacaatt 14626108  T
386 catacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctt 448  Q
    || ||||||||||| ||||   ||| ||| ||||||| || |||  |||||||||||||||||    
14626107 caaacaacatttgagaatttgtaaagtgaagatgattgtgataataactaacccccttacctt 14626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 80 - 375
Target Start/End: Complemental strand, 35009735 - 35009439
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || |||    
35009735 tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaa 35009636  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
    |||||||||||| ||| |  ||  | |  |||||||| |||||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| ||     
35009635 caacatcaattgaacatggttctcatcataattcaacaacaacatagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattg 35009536  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||| ||||| ||||||||||||||| |||| |||||||||||||||||||| || ||||| |||| ||||||||||||||||||||| ||||||    
35009535 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacttaacatcacagttagagcacgaatttagcaacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 83 - 375
Target Start/End: Complemental strand, 1658040 - 1657748
Alignment:
83 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 182  Q
    |||||||||||||||||||||||||||| |||||| | || |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| ||    
1658040 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataa 1657941  T
183 catcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattc-atccattttgcacaattttcataacttctcatttctacatatttaaac 281  Q
    |||||| || |||||||||||| ||||||||| | | ||| |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || |||    
1657940 catcaactgaacaagaatcataactcaattca-caataacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaac 1657842  T
282 atggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||  |||| ||||||||||||||| |||| |||||||||||||| |||||||| ||||| |||| ||||||||||||||||||||| ||||||    
1657841 atgtgatttcaccaacaatcatacaattatcatcaattcatgcatccaaacataacatcacagttagagcacgaatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 83 - 375
Target Start/End: Original strand, 15862443 - 15862734
Alignment:
83 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 182  Q
    |||||||||||||||||||||||||||| |||||| | || |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| ||    
15862443 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattatcagcaataa 15862542  T
183 catcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattc-atccattttgcacaattttcataacttctcatttctacatatttaaac 281  Q
    ||| ||| | |||||||||||| ||||||||| | | ||| |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || |||    
15862543 cataaat-gaacaagaatcataactcaattca-caataacttagcaaaatccatcaattgagcacaattttcataacttcacatttatacataattgaac 15862640  T
282 atggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||  |||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||| |||||||||||||| |||||| ||||||    
15862641 atgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 87 - 450
Target Start/End: Complemental strand, 1650382 - 1650020
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| ||||||    
1650382 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatc 1650283  T
187 aattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatgg 285  Q
    |||||  ||||||||| | ||||| | ||| | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||  ||||||||| ||||||     
1650282 aattgagcaagaatcaaatctcaaattaaccataacttagcaaaattcaccaattgagcacaattttcacaacttatcattcttacatatttgaacatgt 1650183  T
286 aatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat-aatcaaaat 384  Q
    ||||| ||||||||||||||| |||| |||||||||||||||||||| || ||||| |||  |||||||||| |||||  |||  | ||| || | |  |    
1650182 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattt 1650083  T
385 tcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttaccttaa 450  Q
    |||||||||||  ||||||   |||||| |  ||||||||| ||||||||||||||||||||||||    
1650082 tcatacaacatgagaaaat--gcaaaatta-catgattatgataaagactaacccccttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 80 - 363
Target Start/End: Original strand, 25175531 - 25175815
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
25175531 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 25175629  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
25175630 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 25175729  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
     |||||| ||||| ||||||||| |||||  ||  ||||||||||||||||||||||| || || ||   ||||||||||||||||    
25175730 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacacagcaagagcacgaatttagca 25175815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 80 - 363
Target Start/End: Complemental strand, 27654267 - 27653983
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||| ||| ||||||||||||||||||| |||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
27654267 tttcaccaaaacaccgaca-caattcaaattctcatcattaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 27654169  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| | | |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
27654168 taacatcattggaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 27654069  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
     |||||| ||||| ||||||||| |||||  ||  |||||||||||||||||| |||| ||||| ||   ||||||||||||||||    
27654068 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaagcataacatcacagcaagagcacgaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 80 - 363
Target Start/End: Complemental strand, 16826038 - 16825752
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||| | ||||||| |||||||||  |||| |||   || |||  |    
16826038 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcataacaaagcaattattcatcaatcataatatcagataacattca 16825940  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaa--catgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| |||||||||| | ||||| | ||| ||||   | |  |||| || | |||| ||||||| |||||||||| |||||| | ||||| |    
16825939 taacatcatttgaacaagaatcacaactcaaattaacaacaaattaggagaaatccaccaatttagcacaatcttcataacttatcatttttgcatatat 16825840  T
278 aaacatggaatttaaccaacaatca--tacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
     |||||| ||||| ||||||||| |  ||||  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
16825839 gaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 16825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 417 - 497
Target Start/End: Complemental strand, 19983224 - 19983144
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
19983224 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 19983144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 417 - 497
Target Start/End: Complemental strand, 35015089 - 35015009
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
35015089 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 35015009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 23148266 - 23148335
Alignment:
380 aaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||    
23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 27740808 - 27740941
Alignment:
83 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 182  Q
    |||||||||||||||| ||||||||||| ||||||||||| |||||| ||| |||||||| | |||||||||| || | ||||||   ||  | |||| |    
27740808 caccaaaacaccaacaccaattcaaattttcatcatcaattcatgaatatgcatacccaaaccatgattcatccacaacaacatcagataatagcaacca 27740907  T
183 catcaattgcacaagaatcatagctcaattcaac 216  Q
    ||||||||| ||| |||||||| |||||||||||    
27740908 catcaattgaacatgaatcatatctcaattcaac 27740941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 417 - 497
Target Start/End: Original strand, 18583640 - 18583720
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| | || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
18583640 atgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 18583720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 69 - 223
Target Start/End: Complemental strand, 18381975 - 18381821
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatc 167  Q
    |||||||| |||||||| ||| |||||||||||| |||  ||||||||| |||  ||||||  ||| |||||||||| |||| |||||||| | ||||||    
18381975 caattcaccaatttcacaaaaccaccaacaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatc 18381877  T
168 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 223  Q
      |||||| ||||||||||||||| ||| || || || | ||||||||| ||||||    
18381876 acttagcaacaacaacatcaattgaacatgactcttatcacaattcaacaacaaca 18381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 292 - 375
Target Start/End: Original strand, 27751605 - 27751688
Alignment:
292 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    ||||||||||||||| || | ||||||||||||||||||||||| ||||| | || ||||||||||||||| ||| | ||||||    
27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat 27751688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 375
Target Start/End: Original strand, 29665937 - 29666137
Alignment:
177 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatat 275  Q
    ||||||||||||||| ||| |||||||| |||| |||||| ||||| |  |||| |||| | |||  | ||||||| ||||||||  ||||| | ||||     
29665937 caacaacatcaattgaacatgaatcatatctcatttcaacaacaacttagcaaaattcaccaattgagtacaattt-cataacttgacatttatgcatac 29666035  T
276 tt--aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc 373  Q
    ||  ||||||| ||||| ||| ||||||||||| |||| |||||||||| ||||  || ||| ||||| || | ||||||||||||| ||||||| ||||    
29666036 tttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatcc 29666135  T
374 at 375  Q
    ||    
29666136 at 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 490
Target Start/End: Original strand, 21623506 - 21623563
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 21623563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 22361676 - 22361619
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||||| |||| | ||||  | |||||||||||||||||||    
22361676 ctaacccccttaccttaattatcaccaattcctaggccaagcttcactttagctccta 22361619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 22362032 - 22361926
Alignment:
94 caacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgc 192  Q
    ||||||||| |||| |||||||||||||| ||||||  ||| | |||||||| |||| |||||||| | || |||  |||||| |||||||||||||||     
22362032 caacaacaactcaa-ttctcatcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattga 22361934  T
193 acaagaat 200  Q
    ||| ||||    
22361933 acatgaat 22361926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 16887833 - 16887792
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    ||||||||||||||||||| |||| |||| ||||||||||||    
16887833 ttcatgcatacaaacatattatcatagttagagcacgaattt 16887792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 18629689 - 18629608
Alignment:
279 aacatggaatttaaccaacaatcatacacttattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    |||||| ||||| ||||||||  || || |||| ||||||| ||||||| |||||||||||||| | || ||||||||||||    
18629689 aacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataattagagcacgaattt 18629608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 98
Target Start/End: Original strand, 32898745 - 32898774
Alignment:
69 caattcacaaatttcaccaaaacaccaaca 98  Q
    ||||||||||||||||||||||||||||||    
32898745 caattcacaaatttcaccaaaacaccaaca 32898774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 33324898 - 33324939
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
33324898 ttcatgcatacaaacatatcatcctagttagagcacgaattt 33324939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 35136054 - 35136013
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
35136054 ttcatgcatacaaacatatcatcctagttagagcacgaattt 35136013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 418 - 490
Target Start/End: Original strand, 14152632 - 14152704
Alignment:
418 tgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    |||||||| | |||| |||||||||| ||||||||| | | || | ||||| | |||||||||||||||||||    
14152632 tgattatgatgaagaataacccccttgccttaattagcacaaattcctagcccaagcttcactttagctccta 14152704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 18002427 - 18002395
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
18002427 atgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 23995247 - 23995279
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
23995247 atgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 224
Target Start/End: Complemental strand, 25367490 - 25367374
Alignment:
109 ttctcatcatcaatccatgaa-catgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 207  Q
    ||||||||| |||| |||||| |||| | |||||||| |||| | ||| |  | ||||||  |||||| ||||||||||||||| ||| ||||| || |     
25367490 ttctcatcaacaattcatgaatcatgcacacccaagccatgaattatcgataacaacatcacttagcaacaacaacatcaattgaacatgaatcttatca 25367391  T
208 caattcaactacaacat 224  Q
    ||||||||| |||||||    
25367390 caattcaacaacaacat 25367374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 26090059 - 26090091
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
26090059 atgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 80 - 446
Target Start/End: Original strand, 19173 - 19543
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || |||    
19173 tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaa 19272  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||||||||     
19273 taacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 19372  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||    
19373 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattat 19472  T
379 --caaaattcatacaacatttgaaaattcac-aaaatgatgatgattatggtaaagactaacccccttacc 446  Q
       ||||||||||||||||||||||||| || ||||| |||||||||||| | ||||||||||||||||||    
19473 gcaaaaattcatacaacatttgaaaatttacaaaaattatgatgattatgatgaagactaacccccttacc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 80 - 375
Target Start/End: Original strand, 21257 - 21553
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || |||    
21257 tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaa 21356  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||||||||     
21357 taacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 21456  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||| ||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
21457 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 191; Significance: 1e-103; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 80 - 449
Target Start/End: Original strand, 23506932 - 23507302
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||| | |||||| |||| || | |    
23506932 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca 23507031  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||||||||     
23507032 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 23507131  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| ||||||||     
23507132 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaaatggagcacgaatttagcaacaattatccataag 23507231  T
379 caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    |||||||||||||||||||||||  | ||||||||  |||||||||| |||||||||||||||||||||||    
23507232 caaaattcatacaacatttgaaatcttacaaaatggagatgattatgataaagactaacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 69 - 449
Target Start/End: Complemental strand, 27182854 - 27182471
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 168  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| ||||||||||||||||||| | ||||||     
27182854 caattcaaaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatactcaagcaatgattcatcaaccacaacatca 27182755  T
169 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcattt 267  Q
    |||| || | | ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| ||||||    
27182754 attaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 27182655  T
268 ctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaa 367  Q
     | | ||||| |||||| ||||| | ||||||||||||| |||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||    
27182654 gttcctatttgaacatgtaatttcatcaacaatcatacaattatcatcagttcatgcatacaaacatatcatcacagttggagcatgaatttagcaacaa 27182555  T
368 tcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    | |||||| ||   ||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||    
27182554 ttatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 27182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 84 - 449
Target Start/End: Complemental strand, 22054125 - 22053753
Alignment:
84 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaac 183  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| ||||| |||||||||||||||||||||| | |||||| |||| || ||| |||    
22054125 accaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataac 22054026  T
184 atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaaca 282  Q
    |||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
22054025 atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 22053926  T
283 tggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatca 380  Q
    || ||||| |||||||||||||||  ||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   |    
22053925 tgtaatttcaccaacaatcatacaactatcatcaattcatacatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaa 22053826  T
381 aaattcatacaacatttgaaaa--ttcacaaa--atgatgatgattatggtaaagactaacccccttacctta 449  Q
    |||||||||| |||||||||||  |||| |||  ||||||||||||||| | |||||||||||||||||||||    
22053825 aaattcataccacatttgaaaaatttcaaaaatgatgatgatgattatgatgaagactaacccccttacctta 22053753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 88 - 449
Target Start/End: Complemental strand, 18531355 - 18530988
Alignment:
88 aaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatca 187  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||| | |||||| |||| || ||| |||||||    
18531355 aaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatca 18531256  T
188 attgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatgga 286  Q
    |||| ||| |||||||| ||||||||||| ||||| |  |||| |||| | |||   ||||||||||| |||||| ||||| |||||| || |||||| |    
18531255 attgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgaacacaattttcacaacttcacatttttacataattgaacatgta 18531156  T
287 atttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc-ataatcaaa-at 384  Q
    |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| || || ||| ||    
18531155 atttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaacat 18531056  T
385 tcatacaacatttgaaaattcacaaaatgatgat---gattatggtaaagactaacccccttacctta 449  Q
    |||||| ||||||||||| |  ||||||||||||   ||||||| | |||||||||||||||||||||    
18531055 tcataccacatttgaaaaattgcaaaatgatgatgacgattatgatgaagactaacccccttacctta 18530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 209 - 375
Target Start/End: Original strand, 20623066 - 20623232
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
20623066 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 20623165  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
20623166 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 209 - 375
Target Start/End: Complemental strand, 21233694 - 21233528
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||| |    
21233694 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 21233595  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
21233594 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 212 - 375
Target Start/End: Original strand, 37052844 - 37053007
Alignment:
212 tcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttat 311  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||||||||||| ||||    
37052844 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattat 37052943  T
312 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
37052944 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 209 - 375
Target Start/End: Original strand, 16536294 - 16536460
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||||||||| |    
16536294 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16536393  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
16536394 tattataaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 83 - 375
Target Start/End: Original strand, 34939248 - 34939540
Alignment:
83 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 182  Q
    |||||||||||||||||||||||||||| |||||| | || |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| ||    
34939248 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacagcaataa 34939347  T
183 catcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattc-atccattttgcacaattttcataacttctcatttctacatatttaaac 281  Q
    |||||| || |||||||||||| ||||||||| | |  || |  |||| || ||| |||  ||||||||||||||||||| ||||| |||||| || |||    
34939348 catcaactgaacaagaatcataactcaattca-caatgacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaac 34939446  T
282 atggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||  |||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| | ||||||    
34939447 atgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 209 - 373
Target Start/End: Complemental strand, 25900571 - 25900408
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||  ||||||| ||||||  ||||||||||||||||||||| |    
25900571 aattcaacaacaacatgtcaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaat 25900473  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc 373  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
25900472 tatcatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatcc 25900408  T

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Target: chr5; HSP #11
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 80 - 363
Target Start/End: Complemental strand, 22366765 - 22366481
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
22366765 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 22366667  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| ||||| |||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
22366666 taacatcatttgaacaagcatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 22366567  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
     |||||| ||||| ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
22366566 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 80 - 363
Target Start/End: Original strand, 25426596 - 25426880
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
25426596 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 25426694  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| |  ||| ||||||| |||||||||| |||||| | ||||| |    
25426695 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatat 25426794  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
     |||||| ||||| ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
25426795 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 80 - 360
Target Start/End: Complemental strand, 18778276 - 18777995
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | ||  ||  |    
18778276 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataatattca 18778178  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
18778177 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 18778078  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 360  Q
     |||||| ||||| ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||   |||||||||||||    
18778077 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaattta 18777995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 80 - 363
Target Start/End: Original strand, 12342 - 12626
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
12342 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 12440  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| |  ||| ||||||| |||||||||| ||| || | ||||| |    
12441 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatat 12540  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
     |||||| ||||| ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
12541 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 363
Target Start/End: Original strand, 19499867 - 19500151
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| ||||||| ||| |||||  |||| ||| | || |||  |    
19499867 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcataccaaagcaattattaatcaatcataatatcaaataacattca 19499965  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| |  ||| ||||||| |||||||||| |||||| | ||||| |    
19499966 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatat 19500065  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
     |||||| ||||| ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
19500066 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 363
Target Start/End: Complemental strand, 21073879 - 21073595
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
21073879 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattga 21073781  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  |    ||||||| |  ||| ||||||| |||||||||| |||||| | ||||| |    
21073780 taacatcatttgaacaagaatcacaactcaaattaacaacaacttagaagaaattcaccactttagcacaatcttcataacttatcatttttgcatatat 21073681  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
     |||||| ||||| ||||||||| |||||  ||  ||| ||||||||||||||||||| ||||| ||   ||||||||||||||||    
21073680 gaacatgtaatttcaccaacaattatacaactaacatccattcatgcatacaaacataacatcacagcaagagcacgaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 99 - 363
Target Start/End: Complemental strand, 4200251 - 4199985
Alignment:
99 acaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaaga 198  Q
    ||||||||||||||||||||||| ||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  | ||||||||||| ||| ||    
4200251 acaattcaaattctcatcatcaacccatgaatatgcaaacccaagcaatcattcatcaatcataatatcaaataacattcataacatcaattgaacatga 4200152  T
199 atcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaa 296  Q
    |||| | ||||| ||||| |||||||  |  ||||||| | |||| ||| ||| |||||||||| |||||| | ||||| | |||||| ||||| |||||    
4200151 atcacatctcaaatcaacaacaacataagagaaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaa 4200052  T
297 caatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 363  Q
    ||||||||||  ||  ||||||||||||||||||||||| ||||| |    ||||||||||||||||    
4200051 caatcatacaactaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagca 4199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 80 - 360
Target Start/End: Complemental strand, 43443679 - 43443398
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
43443679 tttcaccaaaacaccaaca-caattcaaatcctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 43443581  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| |||||| ||| | ||||| ||||| |||||  |    ||||||| | |||  ||||||| |||||||||| |||||| | ||||| |    
43443580 taacatcatttgaacaagactcacatctcaaatcaacaacaacttagaagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat 43443481  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta 360  Q
     |||||| ||||| |||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||   |||||||||||||    
43443480 gaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaattta 43443398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 80 - 359
Target Start/End: Original strand, 27009809 - 27010089
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| | ||||||||||| |||||| ||  |||| ||| | || |||  |    
27009809 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca 27009907  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  | ||||| |||||||||| |||||| |||||||||    
27009908 taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagtacaatattcataacttatcatttttacatattt 27010007  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    ||||||| ||||| ||||||| ||||||| | || ||||||||||||||||||||||| ||||| ||   ||||||||||||    
27010008 aaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 27010089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 70 - 189
Target Start/End: Complemental strand, 17471887 - 17471768
Alignment:
70 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatcta 169  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||  |||||||||||||||||||  || ||||||||      
17471887 aattcaccaatttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcgtacccaagcaatgattcattcacaataacatcag 17471788  T
170 ttagcatcaacaacatcaat 189  Q
    ||| ||  ||||||||||||    
17471787 ttaacaataacaacatcaat 17471768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 243 - 363
Target Start/End: Complemental strand, 29188404 - 29188284
Alignment:
243 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 342  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
29188404 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 29188305  T
343 agttggagcacgaatttagca 363  Q
    |||  |||||||||| |||||    
29188304 agtaagagcacgaatctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 29190552 - 29190478
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactat 161  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||||    
29190552 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactat 29190478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20623026 - 20623079
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
20623026 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 20623079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21233734 - 21233681
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
21233734 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 21233681  T

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Target: chr5; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25900611 - 25900558
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
25900611 atcaactacaatcataacatataatcataccctccatcataattcaacaacaac 25900558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37052801 - 37052854
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
37052801 atcaaccacaatcataacatataatcataccctccatcataactcaacaacaac 37052854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16536254 - 16536307
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||| |||||||||||||| |||||||| |||||||||||||||||||||||    
16536254 atcaactacaatcataacatacaatcataccctccatcataattcaacaacaac 16536307  T

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Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 433 - 492
Target Start/End: Original strand, 11584389 - 11584448
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 492  Q
    ||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||||||    
11584389 ctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 11584448  T

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Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 224
Target Start/End: Original strand, 19862186 - 19862319
Alignment:
91 caccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaat 189  Q
    |||||||||||| |||  |||||||||||||  ||||||  ||| | |||||||  |||| |||||||| |||| |||  |||||| |||||||||||||    
19862186 caccaacaacaactcat-ttctcatcatcaaatcatgaattatgaacacccaagtcatgaatcatcaacaataatatcacttagcaacaacaacatcaat 19862284  T
190 tgcacaagaatcatagctcaattcaactacaacat 224  Q
    |||||| || || || | ||||||||| |||||||    
19862285 tgcacatgattcttatcacaattcaacaacaacat 19862319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 21222519 - 21222462
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||| ||||||||||||| |||| | ||||| | |||||||||||||||||||    
21222519 ctaacccccataccttaattatcaccaattcctagcccaagcttcactttagctccta 21222462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 224
Target Start/End: Original strand, 23493885 - 23494029
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatca 178  Q
    |||||||||| || ||||||||| | |  |||||||||||||  ||||||  ||| | |||||||| |||| |||||| | | ||||||  |||||| ||    
23493885 tttcaccaaaccaacaacaacaacttat-ttctcatcatcaaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaaca 23493983  T
179 acaacatcaattgcacaagaatcatagctcaattcaactacaacat 224  Q
    ||||||||||||| ||| ||||| || | ||||||||| |||||||    
23493984 acaacatcaattgaacatgaatcttatcacaattcaacaacaacat 23494029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 368
Target Start/End: Original strand, 32950861 - 32950951
Alignment:
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 368  Q
    ||||||| ||||| | | ||||||||||| |||| ||||| |||| || || || ||| ||||| |||| ||||||||||||| |||||||    
32950861 aaacatgtaatttcaaccacaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaat 32950951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 5450752 - 5450695
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||||   ||| | ||||| | |||||||||||||||||||    
5450752 ctaacccccttaccttaattattatcaattcctagcccaagcttcactttagctccta 5450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 21310750 - 21310709
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    ||||||||| |||||||||||||| |||| ||||||||||||    
21310750 ttcatgcattcaaacatatcatcatagttagagcacgaattt 21310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 23981557 - 23981516
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    |||||||||||||||||||||||| | || ||||||||||||    
23981557 ttcatgcatacaaacatatcatcataattagagcacgaattt 23981516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 359
Target Start/End: Original strand, 29918131 - 29918212
Alignment:
279 aacatggaatttaaccaacaatcatacacttattatcaatt-catgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    |||||| ||||| ||||||||  || || |||| ||||||| |||| || |||||||||||||| | |||||||||||||||    
29918131 aacatgcaatttcaccaacaacaattcaattatcatcaatttcatgtattcaaacatatcatcataattggagcacgaattt 29918212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 16105967 - 16105999
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
16105967 atgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 182; Significance: 3e-98; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 69 - 449
Target Start/End: Original strand, 41686 - 42066
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 168  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||| ||| |||||||| ||||||||||||| ||| |||| |     
41686 caattcacaa-tttcaccaaaacaccaacaacaattcaaattctaataatcaattcatgaatatgcatacccaaccaatgattcatcatctacaacaaca 41784  T
169 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcattt 267  Q
    |||| || | | | ||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| || || ||||||    
41785 attaacagccatagcatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaaattatcattt 41884  T
268 ctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaa 367  Q
     ||||||||| | |||| ||||| |||||||||   ||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
41885 ttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaa 41984  T
368 tcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    | |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||    
41985 ttatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagaccaacccccttacctta 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 179; Significance: 2e-96; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 80 - 449
Target Start/End: Complemental strand, 1250 - 882
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| ||||||||||||| |||||||||  |||||||  |||| |||| |    
1250 tttcaccaaaacaccaa-aacaattcaaattttcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacataaattaacatcca 1152  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||| ||| |||||||| | | ||||||| ||| ||||| | |  ||||||||| |||  |||||||||||| ||||| | |||| |||||||||     
1151 taacatcacttgaacaagaataaaatctcaatt-aacaacaacttagcaaaattcatcaattgagcacaattttcacaacttattatttttacatatttg 1053  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
1052 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataat 953  T
379 caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    || |||||||||||||||||| ||||   ||| ||| |||||||||| |||||||||||||||||||||||    
952 cacaattcatacaacatttgagaatttgtaaagtgaagatgattatgataaagactaacccccttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 173; Significance: 8e-93; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 80 - 449
Target Start/End: Original strand, 12083 - 12450
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| ||  |||||||| |||| |||  |    
12083 tttcactaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatgaatcataacatcaattaacattca 12181  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||| | |||||||  || ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| |||| |||||    
12182 taacatcaattgaacaagaatcaaatctcaatt--acaacaacttaacaaaattcaccaatttagcacaattttcacaacttatcatttttacacattta 12279  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| | ||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||    
12280 aacatgtattttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttagagcacgaatttagcaacaattatccataat 12379  T
379 caaaa-ttcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    ||||| |||||||| ||||||||| || ||||||| | |||||||||| |||||||||||||||||||||||    
12380 caaaatttcatacagcatttgaaagtt-acaaaattaagatgattatgataaagactaacccccttacctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 171; Significance: 1e-91; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 80 - 449
Target Start/End: Complemental strand, 6358 - 5990
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||||||||||||| |||||||||  ||||||   |||| |||| |    
6358 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacaaaaattaacatcca 6260  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||| ||| |||||||||| | ||||||| ||| ||||| |  |||| |||| | |||  |||||||||| | ||||| | |||| |||||||||     
6259 taacatcacttgaacaagaatcaaatctcaatt-aacaacaacttagcaaaattcaccaattcagcacaatttttacaacttattatttttacatatttg 6161  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
6160 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataat 6061  T
379 caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    || |||||||||||||||||| ||||  |||| |||  ||||||||| |||||||||||||||||||||||    
6060 cacaattcatacaacatttgagaatttgcaaagtgaaaatgattatgataaagactaacccccttacctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 171; Significance: 1e-91; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 80 - 449
Target Start/End: Complemental strand, 128464 - 128095
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| |||| |||||||||  | |||||| |||| |||| |    
128464 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaatcaattattcatcaatcacaacatccattaacatcca 128365  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||| | ||||||| ||| ||||| |  |||| |||  | |||  |||||||||||| |||||  ||  | |||| ||||     
128364 taacatcaattgaacaagaatcaaatctcaatt-aacaacaacctaacaaaattcgccaattgagcacaattttcacaacttaacacctttacacatttg 128266  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||     
128265 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagcaacaattatccataag 128166  T
379 caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    ||||||||||||||| ||||||||||  |||||||| |||||||||| |||||||||||||||||||||||    
128165 caaaattcatacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaacccccttacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 99 - 341
Target Start/End: Complemental strand, 31942 - 31697
Alignment:
99 acaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaaga 198  Q
    |||||||||||||||||||| |||||||||| ||| | ||||||||||| |||||||||  |||| ||  | || |||  | ||||||||||| ||| ||    
31942 acaattcaaattctcatcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatattaaataacattcataacatcaattgaacatga 31843  T
199 atcatagctcaattcaactacaac---atgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaacca 295  Q
    |||| | ||||| ||||| |||||   | |  ||||||| | |||  ||| ||| |||||||||| |||||| | ||||| | || ||| ||||| ||||    
31842 atcacatctcaaatcaacaacaactttaggagaaattcaccaattgagcataatattcataacttatcatttttgcatatatgaatatgtaatttcacca 31743  T
296 acaatcatacacttattatcaattcatgcatacaaacatatcatca 341  Q
    |||||||||||  ||  |||||||||||||| |||||||| |||||    
31742 acaatcatacaactaacatcaattcatgcattcaaacataacatca 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 101
Target Start/End: Original strand, 22650 - 22678
Alignment:
73 tcacaaatttcaccaaaacaccaacaaca 101  Q
    |||||||||||||||||||||||||||||    
22650 tcacaaatttcaccaaaacaccaacaaca 22678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 170; Significance: 5e-91; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 80 - 449
Target Start/End: Complemental strand, 247738 - 247366
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||||| ||||||||||||||| ||| | |||||| ||| |||||||||||||||||||||||| | |||||| |||| ||   |    
247738 tttcaccaaaacaccaacaaccattcaaattctcatcctcagttcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtca 247639  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| || | | |||  |||||||||||| ||||| |||||| | | |||||     
247638 taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttgttcctatttg 247539  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| |||  |||||||||| |||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||| ||    
247538 aacatgaaatttcaccctcaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagcaacaattatccattat 247439  T
379 --caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
       ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
247438 gcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 169; Significance: 2e-90; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 70 - 449
Target Start/End: Original strand, 171863 - 172242
Alignment:
70 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatcta 169  Q
    ||||||| |||||||| ||| ||||||||||||| ||  |||| | || |||  |||||| ||| ||||| |||||||||||||||||| | |||||| |    
171863 aattcaccaatttcacaaaaccaccaacaacaatccat-ttcttaacaacaaatcatgaatatgcatacctaagcaatgattcatcaaccacaacatcaa 171961  T
170 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttc 268  Q
    ||| || | | ||||||||||| ||||||||| || ||||||||||| ||||| |  |||| |||| | |||| |||||||||||| ||||| ||||||     
171962 ttaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttg 172061  T
269 tacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 368  Q
    | | ||||| |||||| ||||| |||| |||||||||| |||| |||||||||| |||||||||||||||||| |||||||||||| ||||||||||| |    
172062 ttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagttggagcacgtatttagcaacagt 172161  T
369 catccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
     |||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
172162 tatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 70 - 449
Target Start/End: Original strand, 177566 - 177945
Alignment:
70 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatcta 169  Q
    ||||||| |||||||| ||| ||||||||||||| ||  |||| | || |||  |||||| ||| ||||| |||||||||||||||||| | |||||| |    
177566 aattcaccaatttcacaaaaccaccaacaacaatccat-ttcttaacaacaaatcatgaatatgcatacctaagcaatgattcatcaaccacaacatcaa 177664  T
170 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttc 268  Q
    ||| || | | ||||||||||| ||||||||| || ||||||||||| ||||| |  |||| |||| | |||| |||||||||||| ||||| ||||||     
177665 ttaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttg 177764  T
269 tacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 368  Q
    | | ||||| |||||| ||||| |||| |||||||||| |||| |||||||||| |||||||||||||||||| |||||||||||| ||||||||||| |    
177765 ttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagttggagcacgtatttagcaacagt 177864  T
369 catccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
     |||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
177865 tatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 70914 - 70882
Alignment:
69 caattcacaaatttcaccaaaacaccaacaaca 101  Q
    |||||||||||||||||||||||||||||||||    
70914 caattcacaaatttcaccaaaacaccaacaaca 70882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 167; Significance: 3e-89; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 80 - 449
Target Start/End: Complemental strand, 123460 - 123087
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||| || |||||||||| | |||||| |||| || | |    
123460 tttcaccaaaacaccaacaacaattcaaattctcatcttcaattcatgaatatgcatacccaagccattattcatcaaccacaacatcaattaacaacca 123361  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||||| || |||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| | | |||||     
123360 taacatcaattgaacaagaatcataacttaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttg 123261  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||    
123260 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattat 123161  T
379 --caaaattcatacaacatttgaaaattcac-aaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
       ||||||||||||||||||| ||||| || ||||| |||||||||||||| |||||||||||||||||||||    
123160 gcaaaaattcatacaacatttgcaaatttacaaaaattatgatgattatggtgaagactaacccccttacctta 123087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 255106 - 255074
Alignment:
69 caattcacaaatttcaccaaaacaccaacaaca 101  Q
    ||||||||||||||||| |||||||||||||||    
255106 caattcacaaatttcacgaaaacaccaacaaca 255074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 261712 - 261680
Alignment:
69 caattcacaaatttcaccaaaacaccaacaaca 101  Q
    ||||||||||||||||| |||||||||||||||    
261712 caattcacaaatttcacgaaaacaccaacaaca 261680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 159; Significance: 2e-84; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 80 - 449
Target Start/End: Original strand, 8846 - 9215
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||  | |||||| |||| |||| |    
8846 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatacatgaatatgcatacccaagcaattattcatcaatcacaacatcaattaacatcca 8944  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||| |||||  ||||| |||||| ||     
8945 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaacttaacatttttacataattg 9044  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| |||||||||| |||| |||| ||| ||||||||||||||||||| ||||| |  |||||||||||||||||||||||  |||||||     
9045 aacatgtaatttcaccaacaatcttacaattatcatcgattcatgcatacaaacataacatcacaaatggagcacgaatttagcaacaattttccataag 9144  T
379 caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
    |||||||| |||||| ||||||||||  |||||||| |||||||||| |||||||||||||||||||||||    
9145 caaaattcgtacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaacccccttacctta 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 156; Significance: 1e-82; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 80 - 449
Target Start/End: Complemental strand, 26710 - 26340
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||| |||||||||||||||| | |||||||||||| ||||| ||| || ||| |||||||||||||||||||||||  | |||||| |||| || | |    
26710 tttcatcaaaacaccaacaacact-caaattctcatcctcaattcatcaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagcca 26612  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||||| |||| |  ||| ||||| |  |||| |||| | |||  | |||||||||| ||||| |||||| |||||||||     
26611 taacatcaattgaacaagaatcataactcattctaacaacaacttagcaaaattcaccaattgagaacaattttcacaacttatcatttttacatatttg 26512  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| | ||| ||||| |||| |||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||    
26511 aacatgtactttcaccaataatcttacaattatcatcaattcacgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatacattat 26412  T
379 -caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
      ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||    
26411 gaaaaattcatacaacatttgaaaatttacaaaatgatcatgattatgataaagactaacccccttacctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 87 - 375
Target Start/End: Complemental strand, 8466 - 8180
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    ||||||||| |||||||||||||||||||||||||| |||| | ||| |||||||||| ||||||||| ||| | |||||| |||| || ||||||||||    
8466 aaaacaccagcaacaattcaaattctcatcatcaattcatgtatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatc 8367  T
187 aattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatgg 285  Q
    ||||| ||| |  ||  | |  ||||||||   |||||  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || ||| ||     
8366 aattgaacatggttctcatcataattcaac---aacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacctgt 8270  T
286 aatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    ||||| ||||||||||||||| |||| | ||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||    
8269 aatttcaccaacaatcatacaattatcaccaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 6934 - 6877
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||| ||||||    
6934 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttaactccta 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 154; Significance: 2e-81; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 80 - 439
Target Start/End: Complemental strand, 5356 - 4996
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||| |||||||||||||||| |||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||  | |||||| |||| || | |    
5356 tttcatcaaaacaccaacaaca-ttcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagcca 5258  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||||| |||| |  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||||||||     
5257 taacatcaattgaacaagaatcataactcattctaacaacaactttgcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 5158  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| | ||| |||||||||| |||| |||| ||||||||| ||||||||||||||| ||| |||||||| ||||||||||||||||| |||||| ||    
5157 aacatgtactttcaccaacaatcttacaattatcatcaattcacgcatacaaacatatcgtcacagttggagtacgaatttagcaacaattatccattat 5058  T
379 -caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaaccc 439  Q
      ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||    
5057 gaaaaattcatacaacatttgaaaatttacaaaatgataatgattatgataaagactaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 149; Significance: 2e-78; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 84 - 449
Target Start/End: Original strand, 8820 - 9192
Alignment:
84 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaac 183  Q
    |||||||||||||||| |||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | |||||| ||||  | ||| |||    
8820 accaaaacaccaacaaaaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataac 8919  T
184 atcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaaca 282  Q
    |||||||| |||  ||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
8920 atcaattgaacattaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 9019  T
283 tggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatca 380  Q
    || ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||  ||   |    
9020 tgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagatggagcacgaatttagcaacaattatccaattatgaa 9119  T
381 aaattcatacaacatttgaaaattcacaaa----atgatgatgattatggtaaagactaacccccttacctta 449  Q
    |||| ||||| ||||||||||| |  ||||    ||||||||||||||| | ||||||||| | |||||||||    
9120 aaatacataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacacacttacctta 9192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 80 - 407
Target Start/End: Original strand, 148688 - 149018
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||  |||||||||||||||||||||||| | ||| || |||| || | |    
148688 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatacatacccaagcaatgattcatcaaccacaacttcaattaacaacca 148787  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||||||||     
148788 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 148887  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 378  Q
    |||||| ||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||| || ||    
148888 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacaaatttaacaacaattatcaattat 148987  T
379 --caaaattcatacaacatttgaaaattcac 407  Q
       |||||||||||||||||||||| |||||    
148988 gcaaaaattcatacaacatttgaaatttcac 149018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 349 - 449
Target Start/End: Original strand, 146838 - 146938
Alignment:
349 agcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctt 448  Q
    |||| |||||||| |||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
146838 agcatgaatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 146937  T
449 a 449  Q
    |    
146938 a 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 149; Significance: 2e-78; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 70 - 449
Target Start/End: Original strand, 271983 - 272362
Alignment:
70 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatcta 169  Q
    ||||||| |||||||| ||| ||||||||||||| ||  |||||   | |||| |||||| ||| |||||||||||||||||||||||| | |||||| |    
271983 aattcactaatttcacaaaaccaccaacaacaatccat-ttctctataacaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 272081  T
170 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttc 268  Q
    ||| || | | |||| |||||| |||||||||||| |||||| |||| ||||| |  |||| |||| | |||| |||||||||||| ||||| ||||||     
272082 ttaacagctataacaccaattgaacaagaatcataactcaatccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttg 272181  T
269 tacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 368  Q
    | | ||||| |||||| |||||  ||| |||||||||| |||| |||||||||| |||||||||||||||| | |||||||| ||| ||||||||| | |    
272182 ttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaattcattcatacaaacatatcattacagttggagtacgtatttagcaatatt 272281  T
369 catccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacctta 449  Q
     |||||||||||||||| |||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
272282 tatccataatcaaaatttatacaatatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 135; Significance: 4e-70; HSPs: 6)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 209 - 375
Target Start/End: Original strand, 26892 - 27058
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||||||||| |    
26892 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 26991  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
26992 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 22637 - 22796
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||||||||| |    
22637 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 22736  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
22737 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22597 - 22650
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
22597 atcaactacaatcataacatataatcataccctccatcataattcaacaacaac 22650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26852 - 26905
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
26852 atcaactacaatcataacatataatcataccctccatcataattcaacaacaac 26905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 22857 - 22889
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
22857 atgattatgataaagactaacccccttacctta 22889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 27112 - 27144
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
27112 atgattatgataaagactaacccccttacctta 27144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 135; Significance: 4e-70; HSPs: 3)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 209 - 375
Target Start/End: Complemental strand, 1748 - 1582
Alignment:
209 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacact 308  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||||||||| |    
1748 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 1649  T
309 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
1648 tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1788 - 1735
Alignment:
1 atcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 54  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
1788 atcaactacaatcataacatataatcataccctccatcataattcaacaacaac 1735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
1528 atgattatgataaagactaacccccttacctta 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 134; Significance: 2e-69; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 80 - 368
Target Start/End: Original strand, 48155 - 48443
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| ||||| |||||||||  | |||||| |||| |||| |    
48155 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaggcaattattcatcaatcacaacatcaattaacatcta 48253  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||| |||| ||||     
48254 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg 48353  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 368  Q
    |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
48354 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 497
Target Start/End: Original strand, 20493 - 20572
Alignment:
418 tgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    |||||||| | || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| ||||||||| ||||    
20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 20572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 133; Significance: 6e-69; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 243 - 447
Target Start/End: Complemental strand, 51314 - 51110
Alignment:
243 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 342  Q
    |||||||||||| ||||| |||||| ||| ||||| |||||| ||||| |||||||||| |||| |||| ||||||||||||||||||| |||||||||     
51314 gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcac 51215  T
343 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaaccccct 442  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | |||    
51214 agttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatctcct 51115  T
443 tacct 447  Q
    |||||    
51114 tacct 51110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 122; Significance: 2e-62; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 87 - 375
Target Start/End: Original strand, 13480 - 13769
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    |||||||| |||| |||||||||||||||| ||||| |||||| ||| |||||||||  ||||||||||||| | |||||| |||| || ||||||||||    
13480 aaaacacctacaaaaattcaaattctcatcgtcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatc 13579  T
187 aattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatgg 285  Q
    ||||| ||| |  ||  | |  |||||||| |||||||  |||| |||||| |||  |||||||||||| |||||| ||||| |||||| || ||||||     
13580 aattgaacatggttctcatcataattcaacaacaacatagcaaaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgt 13679  T
286 aatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||    
13680 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 497
Target Start/End: Original strand, 42677 - 42754
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| |||| |||||||||||||||||   |||||||||||| |||||||||||||||||| ||||||||| ||||    
42677 atgattatgataaaaactaacccccttacctt---tatctccaactattagctctagcttcacttttgctcctatgattct 42754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 87 - 375
Target Start/End: Original strand, 41622 - 41911
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | ||||||  ||| || ||||||||||    
41622 aaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatc 41721  T
187 aattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatgg 285  Q
    ||||| ||| |  ||  | |  |||||||| |||||||  |||| |||| | |||   ||||||||||| |||||| ||||| |||||| || ||||||     
41722 aattgaacatggttctcatcataattcaacaacaacatagcaaaattcaccaattgaacacaattttcacaacttcacatttttacataattgaacatgt 41821  T
286 aatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||| ||||||    
41822 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttaacaacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 122; Significance: 2e-62; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 80 - 368
Target Start/End: Original strand, 107715 - 108003
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||||||  | |||||| |||| |||| |    
107715 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcacaacatcaattaacatcca 107813  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | ||||| |||| | |||  |||||||||| | ||||| |||||| | || ||||     
107814 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaatttttacaacttatcatttttgcacatttg 107913  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 368  Q
    |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
107914 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat 108003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 80 - 359
Target Start/End: Complemental strand, 64812 - 64527
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| | ||||||||||| |||||| ||  |||| ||| | || |||  |    
64812 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca 64714  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||    
64713 taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt 64614  T
278 aaacatggaatttaaccaacaatcatacacttattatc-----aattcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    ||||||| ||||| ||||||||||||||| | || |||     |||||||||||| ||||||| ||||| ||   ||||||||||||    
64613 aaacatgtaatttcaccaacaatcatacaatcatcatcaatataattcatgcatataaacataacatcacagcaagagcacgaattt 64527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaattta 360  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 82 - 375
Target Start/End: Complemental strand, 828 - 534
Alignment:
82 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 181  Q
    ||||||||||||||||||| ||||||||||||||| ||||| | |||| ||| |||||||||||||||||||||||| | |||||| ||||||| | | |    
828 tcaccaaaacaccaacaaccattcaaattctcatcctcaattcctgaatatgcatacccaagcaatgattcatcaaccacaacatcaattagcagccata 729  T
182 acatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaa 280  Q
    |||||||||  |||||||||||| || |||  |||   ||| |  |||| |||| | |||  | |||||||||| ||||  |||||| | | ||||| ||    
728 acatcaattaaacaagaatcataacttaatctaacagtaacttagcaaaattcaccaattgagtacaattttcacaactcatcatttgttcctatttgaa 629  T
281 catggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    |||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
628 catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 114; Significance: 1e-57; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 243 - 449
Target Start/End: Complemental strand, 89586 - 89378
Alignment:
243 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 342  Q
    |||||||||||| ||||| | |||| | | ||||| |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||| |||||||||     
89586 gcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcac 89487  T
343 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccc 440  Q
    |||||||||||||||||||||||||| |||||| ||   |||||||||| |||||||||||||| |||||||||||||||| ||| | ||||||||||||    
89486 agttggagcacgaatttagcaacaattatccattatgcaaaaattcatagaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccc 89387  T
441 cttacctta 449  Q
    |||||||||    
89386 cttacctta 89378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 324 - 449
Target Start/End: Complemental strand, 107835 - 107708
Alignment:
324 catacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaattcacaaaatgatgatgat 421  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||| |||||| ||   ||||||||||||||||||||||||| ||||||||||||||||    
107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 107736  T
422 tatggtaaagactaacccccttacctta 449  Q
     ||| | |||||||||||||||||||||    
107735 catgatgaagactaacccccttacctta 107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 191
Target Start/End: Original strand, 79533 - 79616
Alignment:
109 ttctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattg 191  Q
    ||||||||| |||| ||||||  ||| |||||||||| |||| |||||||| |||| |||  |||||| |||||||||||||||    
79533 ttctcatcaccaattcatgaattatgaatacccaagccatgaatcatcaacaataatatcacttagcaacaacaacatcaattg 79616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 79745 - 79786
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
79745 ttcatgcatacaaacatatcatcatagttagtgcacgaattt 79786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 108; Significance: 5e-54; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 83 - 375
Target Start/End: Complemental strand, 34755 - 34460
Alignment:
83 caccaaaacaccaacaacaattcaaa-ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 181  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||| | |||||||||||| | |||||| | || || ||| |    
34755 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaagtagtgattcatcaacaacaacatcaaataacaacaata 34656  T
182 acatcaattgca-caagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaa 279  Q
    |||||||||  | || |||||||| ||||||||||| ||||| |  |||| |||| | |||  | |||||||||| ||||||  |||| |||| | || |    
34655 acatcaattaaaacatgaatcatatctcaattcaacaacaacttagcaaaattcacctattgagaacaattttcacaacttcatatttttacacaattga 34556  T
280 acatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    ||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||| ||||||    
34555 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 87 - 364
Target Start/End: Original strand, 2936 - 3215
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||| |||||| |||||||||||| | |||||| | || || ||| ||||||    
2936 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacacaagcagtgattcatcaacaacaacatcaaataacaacaataacatc 3035  T
187 aattgca-caagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 284  Q
    ||||  | || |||||||| ||||||||||| ||||| |  |||| |||| | |||  |||||||||||| |||||| ||||| |||||| || ||||||    
3036 aattaaaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatg 3135  T
285 gaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaa 364  Q
     ||||| ||||||||||||||| |||| ||||||||||| ||||||||||| ||||| ||   |||||||||||||||||    
3136 taatttcaccaacaatcatacaattatcatcaattcatggatacaaacataacatcacagcaagagcacgaatttagcaa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 104; Significance: 1e-51; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 87 - 341
Target Start/End: Complemental strand, 9626 - 9371
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||    
9626 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 9527  T
187 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatgg 285  Q
    | |||  ||||||||| | ||||| | ||| | ||| | |  ||||||| | |||  |||| ||||||| ||||| |||||| ||||||||| ||||||     
9526 atttgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgt 9427  T
286 aatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 341  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
9426 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 9371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 87 - 341
Target Start/End: Complemental strand, 16524 - 16269
Alignment:
87 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 186  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||    
16524 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 16425  T
187 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatgg 285  Q
    | |||  ||||||||| | ||||| | ||| | ||| | |  ||||||| | |||  |||| ||||||| ||||| |||||| ||||||||| ||||||     
16424 atttgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgt 16325  T
286 aatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 341  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
16324 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 16269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 80 - 340
Target Start/End: Original strand, 42965 - 43226
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
42965 tttcaccaaaacaccaaca-caatttaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 43063  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| ||| |||||| | ||||| | ||| ||||| |  |  ||||||| | |||| ||||||| ||||||||||  ||||| |||||||||    
43064 taacatcacttgaacacgaatcacatctcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttaacatttttacatattt 43163  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatc 340  Q
     |||||| ||||| ||||||||||||||| |||| ||||||||||||||| ||||||| ||||    
43164 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatagaaacataacatc 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 69 - 211
Target Start/End: Original strand, 9338 - 9480
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 168  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | ||||||     
9338 caattcaccattttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 9437  T
169 attagcatcaacaacatcaattgcacaagaatcatagctcaat 211  Q
    |||| || | | ||||||||||| |||||||||||| ||||||    
9438 attaacagccataacatcaattgaacaagaatcataactcaat 9480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 86; Significance: 7e-41; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 243 - 368
Target Start/End: Original strand, 5660 - 5785
Alignment:
243 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 342  Q
    ||||||| ||||| |||| |||||| |||||||||||||||| ||||| ||||||||||||||| | || ||||||||||||||||||||||| ||||||    
5660 gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaa 5759  T
343 agttggagcacgaatttagcaacaat 368  Q
    ||||||||||||||||||||||||||    
5760 agttggagcacgaatttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 5846 - 5878
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    |||||||||||||||||||||||||||||||||    
5846 atgattatggtaaagactaacccccttacctta 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 325
Target Start/End: Complemental strand, 5498 - 5254
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||| ||  | |||||| |||| |||  |    
5498 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgca-acccaagcaattattcattaatcacaacatcaattaacattca 5401  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||| | ||||| | ||| |||||    |||| |||| | |||   ||||||||||||||||| |||||| |||||||||     
5400 taacatcaattgaacaagaatcaaatctcaaattaacaacaactcagcaaaattcaccaattgaacacaattttcataacttatcatttttacatatttg 5301  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgca 325  Q
    |||||| ||||| ||||||||||||||| |||| |||||||||||||    
5300 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 358
Target Start/End: Complemental strand, 102963 - 102923
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 358  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
102963 ttcatgcattcaaacatatcatcataattggagcacgaatt 102923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 80 - 325
Target Start/End: Original strand, 3690 - 3936
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||||||| ||| | ||||||| ||| |||||||||  |||||||| |||| |||  |    
3690 tttcaccaaaacatcaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagtaattattcatcaatcataacatcaattaacattca 3788  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctca-tttctacatattt 277  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||   |||||||| |||||||| ||| ||| |||||||||    
3789 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattggacacaatttccataacttatcattttttacatattt 3888  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgca 325  Q
     |||||| ||||| ||||||||||||||| |||| |||||||||||||    
3889 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 80 - 359
Target Start/End: Original strand, 3 - 283
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||| |||||||||||||| |||| |||||| ||| | ||||||||||| |||||| ||  |||| ||| | || |||  |    
3 tttcaccaaaacaccaaca-caactcaaattctcatcaacaattcatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca 101  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 277  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| | |||||||| |||||| |||||||||    
102 taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatatacataacttatcatttttacatattt 201  T
278 aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    ||||||| ||||| ||||||||||||||| | || ||||||||||||||||||||||| ||||| ||   ||||||||||||    
202 aaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 497
Target Start/End: Original strand, 30417 - 30497
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| | || | |||||||||||||||||||||| |||| || || ||| ||||||||||| ||| ||||| ||||    
30417 atgattatgatgaaaaataacccccttaccttaattatcaccaattattaactcaagcttcacttttgcttctatgattct 30497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 341
Target Start/End: Complemental strand, 14344 - 14083
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | || |||||||| |||||||||  |||||||| |  | |||  |    
14344 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaacaacattca 14246  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||| ||||| |||||||||  | ||||| | | | ||||| | |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||     
14245 taacattaattgaacaagaatccaatctcaaattatcaacaacttaggaaaattcaccaattgagcacaatcttcataacttatcatttttacatatttc 14146  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 341  Q
    |||||| ||||| || |||||||||| | |||| ||||||||||||||||| ||||| |||||    
14145 aacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatca 14083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 80 - 364
Target Start/End: Complemental strand, 21399 - 21115
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||||| || |||||||| ||||||| |||||||||| ||| | || |||||||| |||||||||  |||||||| | || |||  |    
21399 tttcaccaaaacaccaaca-cagttcaaattttcatcattaatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaataacattca 21301  T
180 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 278  Q
     ||||||||||| |||||||||  | ||||| | ||| ||||| | |  ||||||| | |||  || |||| |||||||||| |||||| |||||||||     
21300 taacatcaattgaacaagaatccaatctcaaattaacaacaacttaggaaaattcaccaattgagctcaatcttcataacttatcatttttacatatttg 21201  T
279 aacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaa 364  Q
    |||||| ||||| || |||||||||| | |||| ||||||| ||| ||||||||||| ||||| |    |||||||||||||||||    
21200 aacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatcacaacaagagcacgaatttagcaa 21115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 243 - 363
Target Start/End: Complemental strand, 13445 - 13325
Alignment:
243 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 342  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
13445 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 13346  T
343 agttggagcacgaatttagca 363  Q
    | |  |||||||||| |||||    
13345 actaagagcacgaatctagca 13325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 417 - 497
Target Start/End: Original strand, 80187 - 80267
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| ||||    
80187 atgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttttgctcctatgattct 80267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 80 - 202
Target Start/End: Original strand, 48482 - 48603
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||||||  |||||||| |||| |||| |    
48482 tttcatcaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacatcca 48580  T
180 caacatcaattgcacaagaatca 202  Q
     |||||||| || ||||||||||    
48581 taacatcaagtgaacaagaatca 48603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 58; Significance: 3e-24; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 416 - 497
Target Start/End: Complemental strand, 166197 - 166116
Alignment:
416 gatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    |||||||||| | || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
166197 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 166116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 416 - 491
Target Start/End: Complemental strand, 162111 - 162036
Alignment:
416 gatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 491  Q
    |||||||||| | || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
162111 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 116467 - 116410
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
116467 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 116410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 417 - 497
Target Start/End: Complemental strand, 31212 - 31132
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    |||||| || |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
31212 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 31132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1560 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 80 - 202
Target Start/End: Complemental strand, 147 - 26
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 179  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||||||  |||||||| |||| |||  |    
147 tttcaccaaaacaccaa-aacaattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattca 49  T
180 caacatcaattgcacaagaatca 202  Q
     || |||| ||| ||||||||||    
48 taatatcatttgaacaagaatca 26  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 417 - 491
Target Start/End: Complemental strand, 5809 - 5735
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 491  Q
    ||||||||| | || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
5809 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 417 - 491
Target Start/End: Complemental strand, 6015 - 5941
Alignment:
417 atgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctat 491  Q
    ||||||||| | || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
6015 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 243 - 363
Target Start/End: Complemental strand, 1424 - 1304
Alignment:
243 gcacaattttcataacttctcatttctacatatttaaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 342  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||||| |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
1424 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 1325  T
343 agttggagcacgaatttagca 363  Q
    ||   ||||||||||||||||    
1324 agcaagagcacgaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 416 - 497
Target Start/End: Complemental strand, 385 - 304
Alignment:
416 gatgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    |||||||||| |||||| ||||||| |||||||||||||| ||||||| |||||| ||||||||||| ||||||||| ||||    
385 gatgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 49; Significance: 8e-19; HSPs: 3)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 109 - 325
Target Start/End: Original strand, 54412 - 54630
Alignment:
109 ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctc 208  Q
    |||||||||||||||||| || ||||||||||||   |||||||| | || | ||||||  |||  | ||||||||||||| | ||| |||||| | |||    
54412 ttctcatcatcaatccataaatatgtatacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctc 54511  T
209 aattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatattt--aaacatggaatttaaccaacaatcatac 305  Q
    | |||||| ||||||| ||||| |||| | |||  | ||||||| ||||||||  ||||| |||||| ||  ||||||| ||||| ||| ||||||||||    
54512 atttcaacaacaacatatcaaaattcaccaattgagtacaattt-cataacttgacatttatacatactttgaaacatgcaatttcacccacaatcatac 54610  T
306 acttattatcaattcatgca 325  Q
    | |||| |||||||||||||    
54611 aattatcatcaattcatgca 54630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 325
Target Start/End: Original strand, 45094 - 45244
Alignment:
177 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattttgcacaattttcataacttctcatttctacatat 275  Q
    ||||||||||||| | ||| |||||| | |||| |||||| ||||||| ||||| |||| | |||  | ||||||| || |||||  ||||| ||||||     
45094 caacaacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaattcaccaattgagtacaattt-caaaacttgacatttatacatac 45192  T
276 tt--aaacatggaatttaaccaacaatcatacacttattatcaattcatgca 325  Q
    ||  ||||||| ||||| ||| ||||||||||| |||| |||||||||||||    
45193 tttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatgca 45244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 45007 - 45051
Alignment:
109 ttctcatcatcaatccatgaacatgtatacccaagcaatgattca 153  Q
    |||||||||||||||||| || |||||||||||||  ||||||||    
45007 ttctcatcatcaatccataaatatgtatacccaagtcatgattca 45051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 418 - 497
Target Start/End: Original strand, 1701 - 1780
Alignment:
418 tgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    |||||||| | || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 1780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 418 - 497
Target Start/End: Complemental strand, 19881 - 19802
Alignment:
418 tgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    |||||||| | || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| ||||||||| ||||    
19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 19802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 497
Target Start/End: Complemental strand, 24185 - 24106
Alignment:
418 tgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatgcttct 497  Q
    |||||||| | || |||||||||||||||||||||||| ||||||| || ||| ||||||| ||| ||||||||| ||||    
24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 24106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1404 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1404
Description:

Target: scaffold1404; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 1815 - 1863
Alignment:
80 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaa 129  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
1815 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaa 1863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 3183 - 3252
Alignment:
88 aaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaa 157  Q
    |||||||||||||||||| ||||||| |||||||| |||||| |||  ||||||| ||||||||||||||    
3183 aaacaccaacaacaattccaattctcttcatcaattcatgaatatgcctacccaaacaatgattcatcaa 3252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 375
Target Start/End: Original strand, 3364 - 3453
Alignment:
286 aatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 375  Q
    ||||| |||||||||||||||  ||| || ||||||||||||||||| || ||||| || | |||||||||||||||| |||| ||||||    
3364 aatttcaccaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 418 - 488
Target Start/End: Original strand, 94 - 164
Alignment:
418 tgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcc 488  Q
    |||||||| | || |||||||||||||||||||||||| ||||||| || ||| ||||||||||| |||||    
94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 418 - 492
Target Start/End: Complemental strand, 6335 - 6261
Alignment:
418 tgattatggtaaagactaacccccttaccttaattatctccaactactagctctagcttcactttagctcctatg 492  Q
    |||||||| | || |||||||||||||||||||||||| || |||| || ||| ||||||||||| |||||||||    
6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcctatg 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 368
Target Start/End: Complemental strand, 56226 - 56106
Alignment:
250 tttcataacttctcatttctacatattt--aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 347  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||||| | | ||||||||||| |||| ||||| ||||||| || || ||| ||||| ||||     
56226 tttcataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagtta 56127  T
348 gagcacgaatttagcaacaat 368  Q
    ||||||||||||| |||||||    
56126 gagcacgaatttaacaacaat 56106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 490
Target Start/End: Original strand, 35816 - 35873
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||||||||||    
35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 35873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 224
Target Start/End: Complemental strand, 77139 - 76984
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatc 167  Q
    |||||||| |||||||| ||| |||||||||||| |||  ||||||||| |||  ||||||  ||| |||||||||| |||| |||||||  | || |||    
77139 caattcaccaatttcacaaaaccaccaacaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaataacaatatc 77041  T
168 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 224  Q
      |||||| ||||||||||||||| ||| |||||  | | ||||||||| |||||||    
77040 acttagcaacaacaacatcaattgaacatgaatctcaccacaattcaacaacaacat 76984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 76756 - 76699
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    |||||||||||||||||||||||  ||| | ||||| | |||||||||||||||||||    
76756 ctaacccccttaccttaattatcagcaattcctagcccaagcttcactttagctccta 76699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 250 - 449
Target Start/End: Complemental strand, 10458 - 10256
Alignment:
250 tttcataacttctcatttctacatattt--aaacatggaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 347  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||||| ||| |||| |||||  | || ||||||||||||| |  || ||||||||| ||       
10458 tttcataacttagcatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagcaa 10359  T
348 gagcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccccttacc 446  Q
    ||||||||||||||||||||| || ||| || | |  ||||||||||||  |||||| || ||| |||  |||||||||   ||||| ||||||||||||    
10358 gagcacgaatttagcaacaattattcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgaagaagacaaacccccttacc 10259  T
447 tta 449  Q
    |||    
10258 tta 10256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 132542 - 132420
Alignment:
69 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaa-catgtatacccaagcaatgattcatcaactataacatc 167  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||| || ||| ||||||| |||| | |||||||| |||| | |||| | | |||||     
132542 caattcacaaatttcaccaaaacaccaacaacatttc-atttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatg 132444  T
168 tattagcatcaacaacatcaattg 191  Q
      ||| || |||||||||||||||    
132443 acttaacaacaacaacatcaattg 132420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 490
Target Start/End: Original strand, 442 - 499
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||| | ||||| |||| | ||||||| |||||||||||||||||||    
442 ctaacccccttacctcagttatcaccaattcctagctcaagcttcactttagctccta 499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 1420 - 1363
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||| ||||||| |||| | ||||||| ||||||||||||| |||||    
1420 ctaacccccttacctcaattatcaccaattcctagctcaagcttcactttagttccta 1363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 8216 - 8257
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
8216 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 70348 - 70307
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
70348 ttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

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Target: scaffold0058; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 57424 - 57392
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
57424 atgattatgataaagactaacccccttacctta 57392  T

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Target: scaffold0409 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 1386 - 1348
Alignment:
321 atgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    ||||||||||||||||||||| |||| ||||||||||||    
1386 atgcatacaaacatatcatcatagttagagcacgaattt 1348  T

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Target: scaffold0409; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 9641 - 9603
Alignment:
321 atgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    ||||||||||||||||||||| |||| ||||||||||||    
9641 atgcatacaaacatatcatcatagttagagcacgaattt 9603  T

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Target: scaffold1272 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 490
Target Start/End: Original strand, 632 - 689
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    |||||||||||||| |||||||| | || | ||||| | |||||||||||||||||||    
632 ctaacccccttaccataattatcactaattcctagcccaagcttcactttagctccta 689  T

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Target: scaffold0483 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 490
Target Start/End: Original strand, 6999 - 7056
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    |||||||||||||| |||||||| |||| | ||||| | | |||||||||||||||||    
6999 ctaacccccttaccataattatcaccaattcctagcccaaccttcactttagctccta 7056  T

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Target: scaffold0240 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 98
Target Start/End: Original strand, 7522 - 7551
Alignment:
69 caattcacaaatttcaccaaaacaccaaca 98  Q
    ||||||||||||||||||||||||||||||    
7522 caattcacaaatttcaccaaaacaccaaca 7551  T

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Target: scaffold0151 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 22463 - 22422
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    |||||||||||||||||||||||| | || ||||||||||||    
22463 ttcatgcatacaaacatatcatcatatttagagcacgaattt 22422  T

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Target: scaffold0080 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 43708 - 43651
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
43708 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 43651  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 98
Target Start/End: Original strand, 38253 - 38282
Alignment:
69 caattcacaaatttcaccaaaacaccaaca 98  Q
    ||||||||||||||||||||||||||||||    
38253 caattcacaaatttcaccaaaacaccaaca 38282  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 93814 - 93773
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 359  Q
    |||||||||||| ||||||||||| | |||||||||||||||    
93814 ttcatgcatacatacatatcatcataattggagcacgaattt 93773  T

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Target: scaffold0032; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 55904 - 55936
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
55904 atgattatgataaagactaacccccttacctta 55936  T

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Target: scaffold0032; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 108107 - 108075
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
108107 atgattatgataaagactaacccccttacctta 108075  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 490
Target Start/End: Original strand, 31357 - 31414
Alignment:
433 ctaacccccttaccttaattatctccaactactagctctagcttcactttagctccta 490  Q
    ||||||||||||||||||||| | | || | ||||| | |||||||||||||||||||    
31357 ctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 31414  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 450
Target Start/End: Complemental strand, 193429 - 193396
Alignment:
417 atgattatggtaaagactaacccccttaccttaa 450  Q
    ||||||||| ||||||||||||||||||||||||    
193429 atgattatgataaagactaacccccttaccttaa 193396  T

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Target: scaffold0970 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 2476 - 2532
Alignment:
135 atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattg 191  Q
    |||||||||| |||| |||||||| | ||||||  |||||| |||||||||||||||    
2476 atacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattg 2532  T

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Target: scaffold0706 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 6475 - 6443
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
6475 atgattatgataaagactaacccccttacctta 6443  T

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Target: scaffold0597 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 910 - 878
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
910 atgattatgataaagactaacccccttacctta 878  T

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Target: scaffold0465 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 9914 - 9882
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
9914 atgattatgataaagactaacccccttacctta 9882  T

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Target: scaffold0389 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 358
Target Start/End: Original strand, 10868 - 10908
Alignment:
318 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 358  Q
    |||||||||||||||||||||||| || | |||||||||||    
10868 ttcatgcatacaaacatatcatcatagatagagcacgaatt 10908  T

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Target: scaffold0251 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 13317 - 13285
Alignment:
417 atgattatggtaaagactaacccccttacctta 449  Q
    ||||||||| |||||||||||||||||||||||    
13317 atgattatgataaagactaacccccttacctta 13285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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