View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1302-Insertion-6 (Length: 567)

Name: NF1302-Insertion-6
Description: NF1302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1302-Insertion-6
NF1302-Insertion-6
[»] chr7 (63 HSPs)
chr7 (123-396)||(9784116-9784389)
chr7 (7-124)||(9783963-9784080)
chr7 (390-567)||(10526304-10526475)
chr7 (400-567)||(41453291-41453452)
chr7 (395-567)||(6356763-6356929)
chr7 (392-567)||(19681781-19681950)
chr7 (396-565)||(10526598-10526761)
chr7 (446-567)||(17359225-17359345)
chr7 (420-567)||(33716609-33716752)
chr7 (397-567)||(44332805-44332969)
chr7 (402-563)||(31637948-31638103)
chr7 (446-565)||(35146743-35146861)
chr7 (420-565)||(36423657-36423798)
chr7 (394-565)||(8937137-8937302)
chr7 (421-565)||(28286139-28286279)
chr7 (419-567)||(28297839-28297983)
chr7 (398-567)||(41191971-41192134)
chr7 (394-567)||(48626349-48626516)
chr7 (395-563)||(21391188-21391350)
chr7 (421-565)||(28298107-28298247)
chr7 (446-563)||(6357055-6357171)
chr7 (399-567)||(1114056-1114218)
chr7 (446-565)||(7578916-7579034)
chr7 (397-565)||(17749935-17750097)
chr7 (446-565)||(41453049-41453167)
chr7 (394-565)||(6356573-6356738)
chr7 (396-566)||(8542498-8542662)
chr7 (395-561)||(31075485-31075645)
chr7 (397-563)||(31638233-31638393)
chr7 (396-565)||(8936848-8937011)
chr7 (397-562)||(48626063-48626222)
chr7 (446-565)||(1114333-1114451)
chr7 (446-565)||(41191726-41191844)
chr7 (446-559)||(7909460-7909572)
chr7 (423-563)||(7909310-7909446)
chr7 (397-563)||(21391480-21391640)
chr7 (421-567)||(6356308-6356449)
chr7 (400-561)||(4931565-4931720)
chr7 (397-536)||(16867707-16867840)
chr7 (488-567)||(40673291-40673370)
chr7 (446-563)||(41751694-41751810)
chr7 (421-567)||(7579158-7579300)
chr7 (390-567)||(27738951-27739121)
chr7 (462-567)||(28286403-28286506)
chr7 (400-553)||(35146989-35147136)
chr7 (446-565)||(19681539-19681657)
chr7 (399-567)||(34037197-34037359)
chr7 (396-567)||(43247414-43247579)
chr7 (419-559)||(17363532-17363666)
chr7 (500-559)||(17359479-17359538)
chr7 (421-567)||(36423391-36423533)
chr7 (420-565)||(41751938-41752079)
chr7 (394-553)||(8416482-8416634)
chr7 (446-559)||(8542793-8542904)
chr7 (446-526)||(36674019-36674098)
chr7 (392-546)||(36283512-36283661)
chr7 (488-565)||(33716872-33716948)
chr7 (397-525)||(36282786-36282908)
chr7 (396-531)||(4155597-4155726)
chr7 (397-548)||(41891966-41892111)
chr7 (52-113)||(9783917-9783979)
chr7 (497-563)||(38447600-38447665)
chr7 (500-565)||(40673105-40673169)
[»] chr4 (82 HSPs)
chr4 (396-567)||(16038080-16038245)
chr4 (392-567)||(8591964-8592133)
chr4 (397-567)||(53751188-53751352)
chr4 (394-567)||(14985328-14985495)
chr4 (395-567)||(19088627-19088793)
chr4 (397-565)||(44991279-44991441)
chr4 (395-565)||(46849667-46849831)
chr4 (396-565)||(24898477-24898640)
chr4 (420-567)||(6711984-6712127)
chr4 (395-565)||(14985619-14985783)
chr4 (397-567)||(39448774-39448938)
chr4 (421-563)||(43566400-43566538)
chr4 (398-567)||(53259424-53259587)
chr4 (395-567)||(25182098-25182264)
chr4 (395-567)||(33091739-33091905)
chr4 (402-562)||(50769112-50769266)
chr4 (396-567)||(21763467-21763632)
chr4 (400-567)||(24898192-24898353)
chr4 (396-567)||(42855625-42855790)
chr4 (397-567)||(15477931-15478095)
chr4 (397-567)||(38339492-38339656)
chr4 (402-562)||(30683531-30683686)
chr4 (421-567)||(46849955-46850097)
chr4 (397-565)||(8398031-8398193)
chr4 (396-567)||(1433557-1433722)
chr4 (394-565)||(15477642-15477807)
chr4 (402-565)||(42855344-42855501)
chr4 (402-565)||(43734291-43734448)
chr4 (402-561)||(53750907-53751060)
chr4 (446-567)||(30683814-30683934)
chr4 (397-567)||(37206713-37206877)
chr4 (397-563)||(38339782-38339942)
chr4 (420-567)||(43734572-43734715)
chr4 (399-563)||(52557377-52557535)
chr4 (397-565)||(53994934-53995096)
chr4 (396-567)||(12817805-12817970)
chr4 (445-567)||(19508699-19508820)
chr4 (396-567)||(44991564-44991729)
chr4 (420-567)||(41752102-41752245)
chr4 (402-565)||(52557092-52557249)
chr4 (448-565)||(53259184-53259300)
chr4 (393-547)||(55022280-55022427)
chr4 (396-565)||(16037793-16037956)
chr4 (445-565)||(33091496-33091615)
chr4 (446-565)||(6505581-6505698)
chr4 (446-565)||(8592257-8592375)
chr4 (395-563)||(23756090-23756252)
chr4 (396-563)||(623969-624130)
chr4 (396-563)||(44957388-44957549)
chr4 (462-561)||(50508518-50508615)
chr4 (395-563)||(50768819-50768981)
chr4 (393-565)||(6712251-6712415)
chr4 (420-563)||(20888164-20888303)
chr4 (446-567)||(43566664-43566784)
chr4 (396-567)||(53995220-53995386)
chr4 (446-566)||(12818093-12818212)
chr4 (420-565)||(19508433-19508575)
chr4 (462-563)||(37206488-37206587)
chr4 (396-549)||(44125774-44125921)
chr4 (420-565)||(19088362-19088503)
chr4 (394-546)||(25269307-25269453)
chr4 (420-565)||(39448509-39448650)
chr4 (396-567)||(50508743-50508908)
chr4 (446-562)||(1433315-1433430)
chr4 (396-559)||(36122727-36122883)
chr4 (392-565)||(41751813-41751978)
chr4 (445-561)||(41877903-41878017)
chr4 (446-565)||(25181856-25181974)
chr4 (402-565)||(36122438-36122595)
chr4 (396-567)||(41878145-41878309)
chr4 (446-565)||(21763224-21763343)
chr4 (397-542)||(44957668-44957807)
chr4 (446-565)||(623723-623841)
chr4 (421-558)||(49135928-49136065)
chr4 (446-563)||(23755462-23755578)
chr4 (396-548)||(47602942-47603088)
chr4 (396-515)||(4513254-4513367)
chr4 (488-536)||(44125707-44125755)
chr4 (397-525)||(52692768-52692889)
chr4 (396-504)||(47603710-47603812)
chr4 (392-478)||(52692019-52692101)
chr4 (420-487)||(55022424-55022489)
[»] chr1 (64 HSPs)
chr1 (393-567)||(1762960-1763128)
chr1 (394-567)||(45843403-45843570)
chr1 (392-567)||(27547955-27548124)
chr1 (392-565)||(44322948-44323115)
chr1 (397-567)||(49140429-49140592)
chr1 (396-567)||(12481345-12481510)
chr1 (421-567)||(6798093-6798235)
chr1 (386-567)||(12127339-12127517)
chr1 (397-567)||(16023897-16024061)
chr1 (395-565)||(49140141-49140305)
chr1 (395-567)||(45052975-45053141)
chr1 (396-567)||(37304027-37304192)
chr1 (396-565)||(26707195-26707358)
chr1 (397-565)||(37576469-37576631)
chr1 (420-565)||(49643692-49643833)
chr1 (395-565)||(16024185-16024349)
chr1 (457-567)||(27400710-27400818)
chr1 (390-563)||(3089335-3089502)
chr1 (392-565)||(4696877-4697044)
chr1 (419-565)||(6797827-6797969)
chr1 (446-565)||(12481103-12481221)
chr1 (395-563)||(25995782-25995944)
chr1 (448-567)||(31703660-31703778)
chr1 (420-565)||(37304316-37304457)
chr1 (420-561)||(37585714-37585851)
chr1 (402-567)||(20306007-20306166)
chr1 (394-567)||(23476627-23476794)
chr1 (423-565)||(27547693-27547831)
chr1 (396-565)||(49643959-49644121)
chr1 (385-565)||(1762662-1762836)
chr1 (420-565)||(23476362-23476503)
chr1 (399-567)||(35612368-35612530)
chr1 (396-567)||(2064497-2064662)
chr1 (395-562)||(12127055-12127216)
chr1 (396-562)||(26723092-26723252)
chr1 (397-567)||(37576181-37576345)
chr1 (401-566)||(4330124-4330283)
chr1 (396-565)||(8760271-8760434)
chr1 (392-565)||(20306290-20306457)
chr1 (402-559)||(38000494-38000645)
chr1 (395-567)||(8762685-8762851)
chr1 (420-565)||(9006212-9006353)
chr1 (402-562)||(35612087-35612241)
chr1 (392-567)||(37585979-37586148)
chr1 (446-567)||(9006477-9006596)
chr1 (393-567)||(38127705-38127873)
chr1 (424-552)||(45052715-45052839)
chr1 (397-567)||(37285014-37285177)
chr1 (396-542)||(23598071-23598213)
chr1 (419-565)||(39486222-39486364)
chr1 (446-565)||(31703901-31704019)
chr1 (446-561)||(37284772-37284886)
chr1 (488-567)||(39486479-39486557)
chr1 (507-565)||(25996072-25996130)
chr1 (394-553)||(10831128-10831280)
chr1 (396-525)||(46593559-46593681)
chr1 (419-525)||(34967050-34967152)
chr1 (448-525)||(49837417-49837493)
chr1 (398-551)||(46592813-46592959)
chr1 (397-487)||(13109191-13109277)
chr1 (446-525)||(5537132-5537210)
chr1 (400-525)||(34966306-34966425)
chr1 (396-525)||(5536397-5536520)
chr1 (426-487)||(4697163-4697222)
[»] chr8 (47 HSPs)
chr8 (390-567)||(27473357-27473528)
chr8 (392-567)||(1432126-1432295)
chr8 (392-565)||(33819780-33819947)
chr8 (394-567)||(38588585-38588751)
chr8 (396-567)||(33295970-33296135)
chr8 (395-567)||(7949410-7949576)
chr8 (397-567)||(15048399-15048563)
chr8 (403-565)||(37569320-37569476)
chr8 (392-564)||(1870224-1870390)
chr8 (395-567)||(45276882-45277048)
chr8 (396-567)||(45077489-45077654)
chr8 (392-562)||(15048690-15048854)
chr8 (397-567)||(15871907-15872071)
chr8 (396-565)||(1646500-1646663)
chr8 (402-567)||(1651858-1652016)
chr8 (402-567)||(1740234-1740392)
chr8 (397-553)||(1869934-1870083)
chr8 (420-565)||(11707771-11707912)
chr8 (397-565)||(34470832-34470994)
chr8 (402-565)||(5434905-5435062)
chr8 (392-567)||(7535119-7535288)
chr8 (400-567)||(11173920-11174081)
chr8 (446-563)||(44594891-44595007)
chr8 (397-566)||(5435187-5435350)
chr8 (446-565)||(15871665-15871783)
chr8 (446-565)||(45276641-45276759)
chr8 (423-567)||(27669440-27669580)
chr8 (462-565)||(40048342-40048443)
chr8 (446-567)||(5152820-5152940)
chr8 (420-565)||(27669709-27669849)
chr8 (420-565)||(5152556-5152696)
chr8 (396-567)||(1646793-1646957)
chr8 (447-553)||(40660186-40660291)
chr8 (445-565)||(27473115-27473233)
chr8 (419-565)||(38588875-38589017)
chr8 (397-563)||(40659983-40660143)
chr8 (396-553)||(22763233-22763384)
chr8 (402-565)||(1739953-1740110)
chr8 (488-567)||(18298515-18298594)
chr8 (500-561)||(40048156-40048217)
chr8 (445-565)||(44594644-44594763)
chr8 (420-529)||(33295757-33295862)
chr8 (510-565)||(7534940-7534995)
chr8 (508-565)||(45077307-45077364)
chr8 (446-552)||(37569616-37569721)
chr8 (397-487)||(45077221-45077307)
chr8 (396-488)||(11920135-11920223)
[»] chr6 (63 HSPs)
chr6 (394-567)||(21540263-21540431)
chr6 (396-565)||(6235920-6236083)
chr6 (397-565)||(35167490-35167652)
chr6 (402-565)||(5937818-5937975)
chr6 (396-563)||(6137378-6137538)
chr6 (397-567)||(6532192-6532356)
chr6 (397-567)||(9046086-9046250)
chr6 (395-567)||(26600355-26600521)
chr6 (420-565)||(34890932-34891073)
chr6 (462-565)||(978476-978577)
chr6 (394-565)||(3423167-3423332)
chr6 (423-567)||(18052980-18053120)
chr6 (397-567)||(32753177-32753341)
chr6 (397-567)||(34994666-34994830)
chr6 (446-565)||(26600635-26600753)
chr6 (394-565)||(9046374-9046539)
chr6 (400-567)||(24744332-24744492)
chr6 (396-567)||(32993301-32993466)
chr6 (396-567)||(34890643-34890808)
chr6 (392-565)||(15932844-15933011)
chr6 (400-567)||(2517005-2517166)
chr6 (400-567)||(5938099-5938260)
chr6 (396-567)||(21856841-21857006)
chr6 (397-565)||(31238034-31238196)
chr6 (402-565)||(32753461-32753618)
chr6 (393-567)||(31237742-31237910)
chr6 (404-565)||(5311114-5311269)
chr6 (404-553)||(18053253-18053396)
chr6 (396-565)||(21856554-21856717)
chr6 (446-565)||(34994424-34994542)
chr6 (397-567)||(5310826-5310990)
chr6 (396-567)||(7269950-7270117)
chr6 (446-567)||(7270673-7270793)
chr6 (446-559)||(25176707-25176819)
chr6 (402-567)||(6137664-6137822)
chr6 (448-567)||(3423456-3423574)
chr6 (488-564)||(25176946-25177022)
chr6 (421-553)||(26957261-26957389)
chr6 (397-546)||(2517309-2517452)
chr6 (446-562)||(6236212-6236327)
chr6 (462-558)||(10412796-10412890)
chr6 (421-565)||(5639461-5639601)
chr6 (447-565)||(24744609-24744726)
chr6 (397-565)||(31247404-31247566)
chr6 (396-562)||(7270920-7271080)
chr6 (393-567)||(31247112-31247280)
chr6 (420-561)||(32993036-32993173)
chr6 (462-567)||(26957023-26957126)
chr6 (397-553)||(34517992-34518142)
chr6 (462-547)||(3035941-3036025)
chr6 (491-565)||(7270241-7270315)
chr6 (394-514)||(7438801-7438915)
chr6 (402-538)||(14276404-14276534)
chr6 (397-553)||(17244664-17244814)
chr6 (394-551)||(15286342-15286492)
chr6 (508-567)||(35167778-35167837)
chr6 (390-478)||(34517265-34517349)
chr6 (394-503)||(15932727-15932830)
chr6 (392-525)||(29261279-29261406)
chr6 (397-553)||(6228730-6228879)
chr6 (398-525)||(29260532-29260652)
chr6 (392-478)||(25180221-25180303)
chr6 (524-565)||(5639294-5639335)
[»] chr5 (31 HSPs)
chr5 (396-567)||(9989322-9989487)
chr5 (394-565)||(27186161-27186326)
chr5 (397-562)||(16860303-16860462)
chr5 (397-565)||(38958724-38958886)
chr5 (396-565)||(36440199-36440362)
chr5 (423-567)||(11315982-11316122)
chr5 (393-567)||(2182939-2183107)
chr5 (446-567)||(37424551-37424671)
chr5 (402-564)||(39325417-39325573)
chr5 (423-565)||(24040109-24040247)
chr5 (397-566)||(24040374-24040537)
chr5 (446-562)||(35569819-35569934)
chr5 (420-565)||(37424283-37424424)
chr5 (462-565)||(9989611-9989712)
chr5 (402-565)||(25182941-25183098)
chr5 (451-560)||(29199001-29199109)
chr5 (397-563)||(39325645-39325805)
chr5 (402-563)||(32288083-32288237)
chr5 (396-567)||(36440486-36440651)
chr5 (446-563)||(11316244-11316360)
chr5 (488-567)||(35570066-35570145)
chr5 (397-567)||(38959010-38959173)
chr5 (395-567)||(25567274-25567440)
chr5 (400-567)||(32288363-32288523)
chr5 (420-567)||(27185895-27186037)
chr5 (420-565)||(2183231-2183372)
chr5 (471-567)||(34264634-34264728)
chr5 (446-549)||(1140077-1140171)
chr5 (446-520)||(34264406-34264479)
chr5 (402-553)||(19184602-19184747)
chr5 (532-565)||(34264477-34264510)
[»] chr3 (83 HSPs)
chr3 (397-567)||(10506234-10506398)
chr3 (395-565)||(39664182-39664346)
chr3 (395-567)||(5900709-5900875)
chr3 (393-565)||(27801777-27801943)
chr3 (393-559)||(29818173-29818333)
chr3 (397-567)||(44893740-44893904)
chr3 (397-567)||(54108188-54108352)
chr3 (394-567)||(4757779-4757946)
chr3 (393-565)||(54107898-54108064)
chr3 (392-567)||(47669254-47669423)
chr3 (420-563)||(21568767-21568906)
chr3 (403-565)||(21569033-21569189)
chr3 (398-567)||(39241359-39241522)
chr3 (397-553)||(12791476-12791626)
chr3 (397-565)||(24428855-24429017)
chr3 (396-564)||(53716294-53716455)
chr3 (396-563)||(24428566-24428727)
chr3 (392-567)||(32633351-32633520)
chr3 (396-563)||(42592074-42592235)
chr3 (420-567)||(1994454-1994597)
chr3 (400-567)||(8474132-8474293)
chr3 (397-567)||(42591784-42591948)
chr3 (395-565)||(18464744-18464908)
chr3 (397-562)||(26318182-26318341)
chr3 (394-567)||(26318468-26318635)
chr3 (396-565)||(51509118-51509281)
chr3 (420-565)||(22201904-22202045)
chr3 (421-565)||(29818465-29818605)
chr3 (451-565)||(47303068-47303181)
chr3 (397-567)||(39664470-39664634)
chr3 (394-567)||(4773240-4773406)
chr3 (422-564)||(12203840-12203978)
chr3 (398-567)||(21969630-21969793)
chr3 (398-567)||(21992066-21992229)
chr3 (392-553)||(45306992-45307147)
chr3 (446-565)||(5900467-5900585)
chr3 (402-553)||(10505953-10506098)
chr3 (396-567)||(18464455-18464620)
chr3 (420-567)||(47303304-47303445)
chr3 (402-565)||(54752451-54752608)
chr3 (446-567)||(16931650-16931770)
chr3 (445-565)||(41834969-41835088)
chr3 (402-563)||(44894030-44894185)
chr3 (446-565)||(4757538-4757656)
chr3 (397-565)||(12203551-12203713)
chr3 (395-567)||(22201614-22201780)
chr3 (396-559)||(28986436-28986592)
chr3 (446-564)||(47669548-47669665)
chr3 (395-565)||(1994167-1994331)
chr3 (395-565)||(1999326-1999490)
chr3 (402-552)||(11256404-11256548)
chr3 (397-567)||(54752163-54752327)
chr3 (446-562)||(8473890-8474005)
chr3 (445-565)||(21969917-21970036)
chr3 (445-565)||(21992353-21992472)
chr3 (396-565)||(53716581-53716744)
chr3 (446-561)||(15986526-15986640)
chr3 (462-565)||(15986296-15986397)
chr3 (420-563)||(27801510-27801649)
chr3 (396-559)||(46152614-46152771)
chr3 (445-565)||(22152133-22152252)
chr3 (462-567)||(51509405-51509508)
chr3 (395-567)||(22151843-22152009)
chr3 (488-565)||(32633150-32633227)
chr3 (402-553)||(16931906-16932051)
chr3 (397-548)||(45306832-45306977)
chr3 (446-567)||(39951401-39951521)
chr3 (468-565)||(39241646-39241741)
chr3 (420-565)||(4773530-4773671)
chr3 (420-565)||(19883528-19883669)
chr3 (462-558)||(41835221-41835315)
chr3 (396-567)||(11256102-11256267)
chr3 (462-562)||(46152904-46152999)
chr3 (504-565)||(28986261-28986322)
chr3 (397-553)||(44317515-44317665)
chr3 (396-553)||(49528148-49528299)
chr3 (462-529)||(7681447-7681512)
chr3 (402-553)||(13866025-13866170)
chr3 (421-520)||(15790701-15790796)
chr3 (420-514)||(28985530-28985620)
chr3 (462-565)||(39951645-39951742)
chr3 (446-521)||(7163494-7163568)
chr3 (523-562)||(19883359-19883398)
[»] chr2 (50 HSPs)
chr2 (395-567)||(10991849-10992015)
chr2 (400-567)||(7469169-7469330)
chr2 (396-567)||(8174171-8174336)
chr2 (396-562)||(24138067-24138227)
chr2 (396-567)||(13192987-13193152)
chr2 (392-567)||(15744452-15744621)
chr2 (394-565)||(24371964-24372129)
chr2 (396-567)||(24372253-24372418)
chr2 (396-565)||(15405755-15405918)
chr2 (402-565)||(8173890-8174047)
chr2 (396-567)||(33470209-33470374)
chr2 (448-565)||(10992139-10992255)
chr2 (396-565)||(7496267-7496430)
chr2 (420-565)||(13193276-13193417)
chr2 (396-567)||(16305024-16305189)
chr2 (446-567)||(19847604-19847724)
chr2 (397-567)||(29472242-29472406)
chr2 (402-565)||(2147890-2148048)
chr2 (420-565)||(17052342-17052483)
chr2 (446-565)||(12860424-12860542)
chr2 (448-567)||(12860653-12860771)
chr2 (462-562)||(29472533-29472631)
chr2 (446-565)||(30898589-30898707)
chr2 (462-565)||(34735404-34735505)
chr2 (397-567)||(15406042-15406205)
chr2 (446-567)||(26181986-26182106)
chr2 (397-567)||(34735629-34735793)
chr2 (397-567)||(38332704-38332868)
chr2 (420-565)||(16305313-16305454)
chr2 (420-559)||(38332974-38333109)
chr2 (446-563)||(42834466-42834582)
chr2 (396-565)||(7495979-7496142)
chr2 (446-562)||(19815748-19815863)
chr2 (395-567)||(19815990-19816156)
chr2 (423-567)||(2148172-2148312)
chr2 (462-567)||(24138792-24138896)
chr2 (397-567)||(36713588-36713752)
chr2 (446-562)||(41474373-41474488)
chr2 (446-562)||(26181744-26181859)
chr2 (421-566)||(41474104-41474245)
chr2 (490-565)||(36713873-36713948)
chr2 (462-532)||(8444883-8444951)
chr2 (420-565)||(15744745-15744876)
chr2 (396-513)||(17032592-17032703)
chr2 (394-553)||(8962357-8962509)
chr2 (396-513)||(17050928-17051039)
chr2 (399-519)||(8445123-8445237)
chr2 (509-561)||(7469458-7469510)
chr2 (510-567)||(17052164-17052222)
chr2 (513-552)||(13810489-13810528)
[»] scaffold0029 (2 HSPs)
scaffold0029 (392-567)||(72757-72926)
scaffold0029 (396-565)||(73049-73212)
[»] scaffold0186 (2 HSPs)
scaffold0186 (396-567)||(24161-24326)
scaffold0186 (446-559)||(24456-24568)
[»] scaffold0019 (2 HSPs)
scaffold0019 (397-567)||(50762-50927)
scaffold0019 (446-565)||(50520-50638)
[»] scaffold0134 (2 HSPs)
scaffold0134 (395-565)||(14133-14297)
scaffold0134 (396-567)||(14421-14586)
[»] scaffold0115 (2 HSPs)
scaffold0115 (395-567)||(21510-21675)
scaffold0115 (396-553)||(22453-22604)
[»] scaffold0037 (3 HSPs)
scaffold0037 (446-565)||(56424-56542)
scaffold0037 (446-565)||(63549-63667)
scaffold0037 (396-567)||(45755-45920)
[»] scaffold0182 (2 HSPs)
scaffold0182 (392-567)||(19703-19872)
scaffold0182 (446-565)||(19996-20114)
[»] scaffold0003 (4 HSPs)
scaffold0003 (445-567)||(349116-349237)
scaffold0003 (445-565)||(113654-113773)
scaffold0003 (422-565)||(349361-349499)
scaffold0003 (396-532)||(113392-113522)
[»] scaffold0340 (2 HSPs)
scaffold0340 (420-567)||(18294-18437)
scaffold0340 (446-565)||(18561-18679)
[»] scaffold0032 (3 HSPs)
scaffold0032 (420-553)||(81879-82008)
scaffold0032 (488-567)||(82144-82223)
scaffold0032 (446-509)||(90782-90844)
[»] scaffold0246 (2 HSPs)
scaffold0246 (447-565)||(6283-6399)
scaffold0246 (448-563)||(6044-6158)
[»] scaffold0220 (2 HSPs)
scaffold0220 (446-567)||(20795-20915)
scaffold0220 (517-565)||(21038-21086)
[»] scaffold0221 (2 HSPs)
scaffold0221 (420-565)||(8716-8857)
scaffold0221 (396-567)||(8428-8592)
[»] scaffold0260 (1 HSPs)
scaffold0260 (462-562)||(14252-14350)
[»] scaffold0072 (2 HSPs)
scaffold0072 (446-565)||(15736-15854)
scaffold0072 (400-567)||(15456-15612)
[»] scaffold0001 (2 HSPs)
scaffold0001 (462-548)||(147145-147229)
scaffold0001 (420-550)||(144041-144166)
[»] scaffold0225 (1 HSPs)
scaffold0225 (452-553)||(9832-9931)


Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 123 - 396
Target Start/End: Original strand, 9784116 - 9784389
Alignment:
Q  123 catacttcgagagaagaataactgcagcgagtggttgaggagttgaagaagctacaatgcgattgaggagagcgagaaagtgagggaaaagaagaaagtg 222  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9784116 catacttcgagagaagagtaactgcagcgagtggttgaggaattgaagaagctacaatgcgattgaggagagcgagaaagtgagggaaaagaagaaagtg 9784215  T
Q  223 gtggtttgaggaagtgaaaggtgattggtgaattaatagaggtagccattgccatcgacataggcatagatagacggtggtggttcggttgggagagagg 322  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9784216 gtggtttgaggaagtgaaaggtgattggtgaattaattgaggtagccattgccatcggcataggcatagatagacggtggtggttcggttgggagagagg 9784315  T
Q  323 gaggagccaattgttgcggagagtttagaaatttgacggttggtttgaaaatatttgcatctttattataaaaa 396  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9784316 gaggagccaattgttgcggagagtttagaaatttgacagttggtttgaaaatatttgcatctttattataaaaa 9784389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 9783963 - 9784080
Alignment:
Q  7 aaaaattgcatttcagaaattcaacaaatacttgaaacggttactcgactaagaaactcaaaatcactattaaagacataaaaaatgagtaaaaattgca 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9783963 aaaaattgcatttcagaaattcaacaaatacttgaaacggttactcgactaagaaactcaaaatcactattaaaggcataaaaaatgagtaaaaattgca 9784062  T
Q  107 tttcagatatcaaaatca 124  Q
    ||||||||||||||||||    
T  9784063 tttcagatatcaaaatca 9784080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 390 - 567
Target Start/End: Original strand, 10526304 - 10526475
Alignment:
Q  390 ataaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaa 488  Q
    ||||| |||||||||||||||||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||     
T  10526304 ataaataggctaaattacctttttggtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa- 10526397  T
Q  489 agtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
     |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  10526398 -gtttctcaccgttactacatttagtcctttctgttagttttattcaaataaacgttagagtttgtgttatgtgggtcc 10526475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 400 - 567
Target Start/End: Complemental strand, 41453452 - 41453291
Alignment:
Q  400 taaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcac 498  Q
    |||||||||||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||||||||||||||  |||||||||    
T  41453452 taaattacctttttggtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttatttcgatcctctaa--gtttctcac 41453360  T
Q  499 cgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  41453359 cgttactacatttagtcatttctgttagttttattcaaataaatgttagggtttgtgttatgtgggtcc 41453291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 395 - 567
Target Start/End: Original strand, 6356763 - 6356929
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    ||||||||||||||||||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||    
T  6356763 aaggctaaattacctttttggtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gttt 6356855  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
     ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| |||||||||||||    
T  6356856 ttcaccgttactacatttagtcctttctgttagttttattcaaataaatgttagtgtttgtgttatgtgggtcc 6356929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 392 - 567
Target Start/End: Complemental strand, 19681950 - 19681781
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    |||||||||||||||||||||| |||||||   |||||||||||||| |||||   || ||||||||| ||||| ||||||||||||| ||||||||  |    
T  19681950 aaaaaggctaaattacctttttggtcctctg--actatttaattggtatcaga---ttagtcctctaactaaaaattgatttatttcggtcctctaa--g 19681858  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||    
T  19681857 tttttcaccgttactacatttagtcatttctcttagttttattcaaataaatgttagggtttgtgttatgtgggtcc 19681781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 396 - 565
Target Start/End: Complemental strand, 10526761 - 10526598
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| ||||| ||||||||||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||    
T  10526761 aggcttaattatcttttttgtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttc 10526669  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||    
T  10526668 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttaagttttgtgttatgtgggt 10526598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 446 - 567
Target Start/End: Original strand, 17359225 - 17359345
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  17359225 gattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacat 17359322  T
Q  545 tagggtttgagttatgtgggtcc 567  Q
    ||||||||| |||||||||||||    
T  17359323 tagggtttgtgttatgtgggtcc 17359345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 420 - 567
Target Start/End: Original strand, 33716609 - 33716752
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  33716609 ctctaactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttactacatttagtcatt 33716703  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  33716704 tctgttagttttattcaaataaacgttagagtttgtattatgtgggtcc 33716752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 44332969 - 44332805
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||| ||||| |||||||  ||||||||||||||| ||| |   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||    
T  44332969 ggctaaattacatttttggtcctct--aactatttaattggtatcaaa---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttct 44332877  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  44332876 caccgttactacatttagtcctttctgttagttttattcaaataaacgttagagtttctgttatgtgggtcc 44332805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 402 - 563
Target Start/End: Original strand, 31637948 - 31638103
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| |||||||||||||| || ||||  |||||||||||    
T  31637948 aattacctttttagtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcgaaccactaa--gtttctcaccg 31638040  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||    
T  31638041 ttactacatttagtcatttctgttagttttattcatataaacgttagggtttgtgttacgtgg 31638103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 35146743 - 35146861
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35146743 gattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcactgttactacatttagtcatttctgttagttttattcaaataaacgt 35146840  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| |||||||||||    
T  35146841 tagggtttgtgttatgtgggt 35146861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 420 - 565
Target Start/End: Complemental strand, 36423798 - 36423657
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||||||||||| ||||||||||| ||    
T  36423798 ctctaactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttattacatttagtcctt 36423704  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||    
T  36423703 tctgttagttttattcaaataaacgttagagtttgtgttatgtgggt 36423657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 394 - 565
Target Start/End: Complemental strand, 8937302 - 8937137
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtt 492  Q
    |||||||||||||  ||||| |||||||  |||||||||||| || |||||   || ||||||||||||||| ||||||||||||| ||||||||  |||    
T  8937302 aaaggctaaattatatttttggtcctct--aactatttaattagtatcaga---tttgtcctctaattaaaagttgatttatttcggtcctctaa--gtt 8937210  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||    
T  8937209 tctcactgttactacatttagtcctttctgttagttttattcaaataaacgttatggtttgtgttatgtgggt 8937137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 421 - 565
Target Start/End: Original strand, 28286139 - 28286279
Alignment:
Q  421 tctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcattt 519  Q
    |||||||||||| ||||| |||||   |||||||||||| ||||| ||||||||||| | ||||||||  |||||||| |||||||||||||||||||||    
T  28286139 tctaactatttagttggtatcaga---ttggtcctctaactaaaaattgatttattttggtcctctaa--gtttctcatcgttactacatttagtcattt 28286233  T
Q  520 ctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  28286234 ctgttagttttattcaaataaacgttagggtttgtgttatgtgggt 28286279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 419 - 567
Target Start/End: Original strand, 28297839 - 28297983
Alignment:
Q  419 tctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcat 517  Q
    ||||||||||||||||||||   |  ||||||||||||||| | ||||||||||||||||  | ||||  ||||||||||||||||||| ||||||||||    
T  28297839 tctctaactatttaattggt---attagattggtcctctaactaaaaattgatttatttcagttctct--aagtttctcaccgttactatatttagtcat 28297933  T
Q  518 ttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28297934 ttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 28297983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 398 - 567
Target Start/End: Complemental strand, 41192134 - 41191971
Alignment:
Q  398 gctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctc 496  Q
    |||||||||| ||||| |||||||  ||||||||||||||| || ||   || ||||||||| ||||| ||||||||||||| || |||||  |||||||    
T  41192134 gctaaattacttttttggtcctct--aactatttaattggtatcgga---ttagtcctctaagtaaaaattgatttatttcggtcatctaa--gtttctc 41192042  T
Q  497 accgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    || |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41192041 actgttactacatttagtcttttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 41191971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 394 - 567
Target Start/End: Complemental strand, 48626516 - 48626349
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtt 492  Q
    |||||||||||||||||||| |||||||  ||||||||||||||| |||||   || ||||||||| ||||| ||||||||||| | |||| |||  |||    
T  48626516 aaaggctaaattacctttttggtcctct--aactatttaattggtatcaga---ttagtcctctaactaaaaattgatttattttggtcctttaa--gtt 48626424  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||| |||||| |||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  48626423 tctgaccgttgctacatttagtcctttctgttagttttattcaaataaacgttaggatttgtgttatgtgggtcc 48626349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 395 - 563
Target Start/End: Original strand, 21391188 - 21391350
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||||| |||||||||||| |||||||  ||||||||||||||| |||||   || ||||||||| ||||| ||||||||||||| ||||||||  ||||    
T  21391188 aaggcttaattacctttttggtcctct--aactatttaattggtatcaga---ttagtcctctaactaaaaattgatttatttcggtcctctaa--gttt 21391280  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    ||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| ||||| |||||||||    
T  21391281 ctcaccgctactacatttagtcttttctgttaattttattcaaataaacgttagagtttgtgttatgtgg 21391350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 421 - 565
Target Start/End: Complemental strand, 28298247 - 28298107
Alignment:
Q  421 tctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcattt 519  Q
    |||||||||||||||||| |||||   ||   ||||||||||||| ||||||||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  28298247 tctaactatttaattggtatcaga---tttaccctctaattaaaaattgatttatttcgattctctaa--gtttctcaccgttactacatttagtcattt 28298153  T
Q  520 ctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||| ||||||||||||||||||||| ||||| |||||||||||    
T  28298152 ctgttaattttattcaaataaacgttagagtttgtgttatgtgggt 28298107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 446 - 563
Target Start/End: Complemental strand, 6357171 - 6357055
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6357171 gattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcacagttactacatttagtcatttctgttagttttattcaaataaacgt 6357074  T
Q  545 tagggtttgagttatgtgg 563  Q
    ||||||||| | |||||||    
T  6357073 tagggtttgtgctatgtgg 6357055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 399 - 567
Target Start/End: Original strand, 1114056 - 1114218
Alignment:
Q  399 ctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctca 497  Q
    ||||||||||||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||| ||    
T  1114056 ctaaattacctttttggtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttcaca 1114148  T
Q  498 ccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    | ||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  1114149 cagttactaaatttagtcctttctgttagttttattcaaataaacgttagagtttgtgttatgtgggtcc 1114218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 7578916 - 7579034
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||  ||||||||  |||||| ||||||||||||||||||||||||||||||||||||||    
T  7578916 gattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaatgttacttcatttagtcatttctgttagttttattcaaataaacgt 7579013  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| |||||||||||    
T  7579014 tagggtttgtgttatgtgggt 7579034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 397 - 565
Target Start/End: Original strand, 17749935 - 17750097
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  ||||||||||||| | |||||   ||||| |||||| ||||| || |||||||||| ||||||||  ||||||    
T  17749935 ggcttaattacctttttggtcctct--aactatttaattgatatcaga---ttggttctctaactaaaaattaatttatttcggtcctctaa--gtttct 17750027  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||| |||||    
T  17750028 caccgttactacatttagtcatttatgttagttttattcaaataaacgttatggtttgtgttatatgggt 17750097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 41453049 - 41453167
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||| | ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41453049 gattggtcctctaactaaaaattgatttattttggtcctctaa--gtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 41453146  T
Q  545 tagggtttgagttatgtgggt 565  Q
    |||| |||| ||||| |||||    
T  41453147 taggatttgtgttatatgggt 41453167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 394 - 565
Target Start/End: Complemental strand, 6356738 - 6356573
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtt 492  Q
    ||||||| |||||||||||| ||||| |  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||    
T  6356738 aaaggcttaattacctttttggtcctat--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtt 6356646  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||| | |||||| | |||||||||    
T  6356645 tctcactgttactacatttagtcctttctgttagttttattcaaataaacgtcaaggtttgtgctatgtgggt 6356573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 396 - 566
Target Start/End: Original strand, 8542498 - 8542662
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||||||||| ||| |||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||||  ||||||||  |||||    
T  8542498 aggctaaattacctttttcgtcttct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttatttcagtcctctaa--gtttc 8542590  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtc 566  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||| ||| ||||||||    
T  8542591 tcaccgttactacatttagtcctttctgttagttttattcaaataaacgtcagagtttgtgttgtgtgggtc 8542662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 395 - 561
Target Start/End: Complemental strand, 31075645 - 31075485
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||||| ||||| |||||| |||||||  ||||||||||||||| |  ||   ||||||||| |||||||| ||||||||||||| ||||||||  ||||    
T  31075645 aaggcttaattatctttttggtcctct--aactatttaattggtattgga---ttggtcctccaattaaaaattgatttatttcggtcctctaa--gttt 31075553  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||| |||||||    
T  31075552 ctcaccgttactacatttagtcctttctgtttgttttattcaaataaacgttaggatttgtgttatgt 31075485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 397 - 563
Target Start/End: Complemental strand, 31638393 - 31638233
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||||||||| ||  |||||||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| |||| ||||  |||||    
T  31638393 ggctaaattacctttttggt--tctctaactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctttaaa--tttct 31638301  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    || ||||||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||    
T  31638300 catcgttactacatttagtcctttctattagttttattcaaataaacgttatggtttgtgtcatgtgg 31638233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 396 - 565
Target Start/End: Original strand, 8936848 - 8937011
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| ||||| |||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||| | ||||||||  |||||    
T  8936848 aggcttaattatctttttagtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttattttggtcctctaa--gtttc 8936940  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  8936941 tcacttttactacatttagtcatttctgttagttttattcaaataaatgttagggtttgtgttatgtgggt 8937011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 397 - 562
Target Start/End: Original strand, 48626063 - 48626222
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  ||||||||| ||||| |||||   ||||| |||||| ||||| ||||||||||||| ||||||||  ||||||    
T  48626063 ggcttaattacctttttggtcctct--aactatttagttggtatcaga---ttggttctctaactaaaaattgatttatttcggtcctctaa--gtttct 48626155  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtg 562  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||||||| | |||| ||||||||    
T  48626156 cactgttactacatttagtcctttctgttagttttattcaaataaacgttatgatttgtgttatgtg 48626222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 565
Target Start/End: Complemental strand, 1114451 - 1114333
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||| | ||||||||  ||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  1114451 gattggtcctctaactaaaaattgatttattttggtcctctaa--gtttctcaccgttactacatttactcttttctgttagttttattcaaataaacgt 1114354  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| ||||| |||||    
T  1114353 tagggtttgtgttatatgggt 1114333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 41191726 - 41191844
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||| ||||||||  | ||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41191726 gattggtcctctaactaaaaattggtttatttcagttctctaa--gtttctcaccgttactacatttagtcctttctgttagttttattcaaataaacgt 41191823  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| |||||||||||    
T  41191824 tagggtttgtgttatgtgggt 41191844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 446 - 559
Target Start/End: Complemental strand, 7909572 - 7909460
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| || |||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7909572 gattggtcctctaactaaaaattgatttatttcggtcttctaa--gtttctcaccgttagtacatttagtcatttctgttagttttattcaaataaacgt 7909475  T
Q  545 tagggtttgagttat 559  Q
    |||| |||| |||||    
T  7909474 taggatttgtgttat 7909460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 423 - 563
Target Start/End: Original strand, 7909310 - 7909446
Alignment:
Q  423 taactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttct 521  Q
    |||||||||||||||| |||||   |||||  ||||| ||||| ||||||||||||| ||||||||  |||| ||||||||||||||||||||| |||||    
T  7909310 taactatttaattggtatcaga---ttggttttctaactaaaaattgatttatttcggtcctctaa--gtttttcaccgttactacatttagtcctttct 7909404  T
Q  522 gttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    |||||||||||||||||||||||||  ||||| |||||||||    
T  7909405 gttagttttattcaaataaacgttatagtttgtgttatgtgg 7909446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 397 - 563
Target Start/End: Complemental strand, 21391640 - 21391480
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||| ||||| ||| |||  ||||||||||||||| || ||   |||||||||||| ||||| || |||||||||| ||||||||  ||||||    
T  21391640 ggctaaattacatttttggtcatct--aactatttaattggtatcgga---ttggtcctctaactaaaaattaatttatttcggtcctctaa--gtttct 21391548  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    |||  ||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| |||||||||    
T  21391547 cactcttactacatttagtcctttctgttagttttattcaaataaatgttagtgtttgtgttatgtgg 21391480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 421 - 567
Target Start/End: Original strand, 6356308 - 6356449
Alignment:
Q  421 tctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcattt 519  Q
    |||||||||||||||||| || ||   |||||||||||||||||| ||||||||||||| ||||||||  |||| | |||||||||||||||||||||||    
T  6356308 tctaactatttaattggtatcgga---ttggtcctctaattaaaaattgatttatttcggtcctctaa--gttttttaccgttactacatttagtcattt 6356402  T
Q  520 ctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
     ||||||||||||||||||||| |||||  |||| ||||| |||||||    
T  6356403 ttgttagttttattcaaataaa-gttagattttgtgttatatgggtcc 6356449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 400 - 561
Target Start/End: Complemental strand, 4931720 - 4931565
Alignment:
Q  400 taaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcac 498  Q
    |||||||| ||||| |||||||  ||||||||||||||| || |||  |||||||||||| ||||| |||| |||||||| ||||||||  |||||||||    
T  4931720 taaattacatttttggtcctct--aactatttaattggtatc-gaa--ttggtcctctaactaaaaattgaattatttcggtcctctaa--gtttctcac 4931628  T
Q  499 cgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||||  |||| |||||||    
T  4931627 cgttactatattcagtcctttctgttagttttattcaaataaacgttagaatttgtgttatgt 4931565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 397 - 536
Target Start/End: Original strand, 16867707 - 16867840
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||||||||| |||||||  |||||| |||||||| |||||   |||||||||||| ||||| ||||||||||||  ||||||||  ||||||    
T  16867707 ggctaaattacctttttggtcctct--aactatataattggtatcaga---ttggtcctctaactaaaaattgatttatttcagtcctctaa--gtttct 16867799  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaa 536  Q
     || |||||||||||||||||||||||||||||||||||||    
T  16867800 tactgttactacatttagtcatttctgttagttttattcaa 16867840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 488 - 567
Target Start/End: Complemental strand, 40673370 - 40673291
Alignment:
Q  488 aagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  40673370 aagtttctcaccgttactatatttagtcatttatgttagttttattcaaataaacgttagagtttgtgttatgtgggtcc 40673291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 446 - 563
Target Start/End: Original strand, 41751694 - 41751810
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||| ||||||||| ||||| |||| |||||||| ||||||||  |||||| |||||||||||||||| || ||| ||||||||||||||||||||||||    
T  41751694 gattagtcctctaactaaaaattgacttatttcggtcctctaa--gtttctaaccgttactacatttaatcctttttgttagttttattcaaataaacgt 41751791  T
Q  545 tagggtttgagttatgtgg 563  Q
    ||||||||| |||||||||    
T  41751792 tagggtttgtgttatgtgg 41751810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 421 - 567
Target Start/End: Complemental strand, 7579300 - 7579158
Alignment:
Q  421 tctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcattt 519  Q
    |||||||||||||||||| || ||   || ||||||||| ||||| |||||||||||||||| |||||   ||||||||||||||||||||||||| |||    
T  7579300 tctaactatttaattggtatcgga---ttagtcctctaactaaaaattgatttatttcgatcatctaat--tttctcaccgttactacatttagtccttt 7579206  T
Q  520 ctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
     | |||||| ||||||||||||||||| |||||  |||||||||||||    
T  7579205 attttagttatattcaaataaacgttatggtttttgttatgtgggtcc 7579158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 390 - 567
Target Start/End: Complemental strand, 27739121 - 27738951
Alignment:
Q  390 ataaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaa 488  Q
    |||| ||||||||||||| |||| |||  ||| |||||||||| ||||| |||||   ||| ||| |||| ||||| ||||||||||||| |||| | |     
T  27739121 ataataaggctaaattactttttctgt--tctttaactatttatttggtatcaga---ttgatcccctaactaaaaattgatttatttcggtcctttta- 27739028  T
Q  489 agtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
     ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  27739027 -gtttctcaccgttactatatttaatc-tttctgttagttttattcaaataaacgttaaggtttgtgttatgtgggtcc 27738951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 462 - 567
Target Start/End: Complemental strand, 28286506 - 28286403
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    |||||||||| |||||| ||||||||  |||||||||||||||||||||||||  ||| | ||||||||||||||||||||||||| ||||| |||||||    
T  28286506 aaaattgattgatttcggtcctctaa--gtttctcaccgttactacatttagttctttatattagttttattcaaataaacgttagagtttgtgttatgt 28286409  T
Q  562 gggtcc 567  Q
    ||||||    
T  28286408 gggtcc 28286403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 400 - 553
Target Start/End: Complemental strand, 35147136 - 35146989
Alignment:
Q  400 taaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaatt-gatttatttcgatcctctaaaagtttctcac 498  Q
    ||||||| |||||| |||||||  ||||||||||||||| |  ||   || ||||||||| ||||||| ||||||||||| ||||||||  |||||| ||    
T  35147136 taaattatctttttggtcctct--aactatttaattggtattgga---ttagtcctctaactaaaatttgatttatttcggtcctctaa--gtttcttac 35147044  T
Q  499 cgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||    
T  35147043 cgttactacatttagtcctttctgttagttttattcaaataaatgttatggtttg 35146989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 19681539 - 19681657
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||  |||| |  ||||||||||||||| || ||||||||||||||| || |||||||||    
T  19681539 gattggtcctctaactaaaaattgatttatttcggtcctctaa--gttttttgccgttactacatttattcctttctgttagttttagtcgaataaacgt 19681636  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| |||||||||||    
T  19681637 tagggtttgtgttatgtgggt 19681657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 399 - 567
Target Start/End: Complemental strand, 34037359 - 34037197
Alignment:
Q  399 ctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctct-aattaaaattgatttatttcgatcctctaaaagtttctca 497  Q
    |||||||| |||||| |||||||  |||||||||||||||   | | |||| ||||||| | | ||||||||||||||||| ||||||  |||||| ||     
T  34037359 ctaaattatctttttggtcctct--aactatttaattggt---atatgattagtcctctgactaaaaattgatttatttcggtcctct--aagtttatct 34037267  T
Q  498 ccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||||||| ||||  |||||||||||||    
T  34037266 ccgttactgcatttagtcctttttgttagttttattcaaataaacgttagagtttatgttatgtgggtcc 34037197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 396 - 567
Target Start/End: Original strand, 43247414 - 43247579
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||  |||||||||||||  ||||||||||||| | ||    |||||||||||||| | ||||||||||||||||||||||||  |||||||    
T  43247414 aggctgaattatattttttgtcctct--aactatttaattgatatc---ggattggtcctctaactaaaaattgatttatttcgatcctct--aagtttc 43247506  T
Q  495 tcaccgttactacatttagt-catttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||| | | ||||| |||||||||||||||||||| ||| |||||  |||||||||||||    
T  43247507 tcaccgttactacatttactccctttctattagttttattcaaataaacatta-ggtttatgttatgtgggtcc 43247579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 419 - 559
Target Start/End: Complemental strand, 17363666 - 17363532
Alignment:
Q  419 tctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcat 517  Q
    |||||||||||||||||||| |  ||   || ||||||||| ||||| ||||||||||||| |||| |||  |||||  |  ||||||||||||||||||    
T  17363666 tctctaactatttaattggtattgga---tttgtcctctaactaaaaattgatttatttcggtcctttaa--gtttc--aatgttactacatttagtcat 17363574  T
Q  518 ttctgttagttttattcaaataaacgttagggtttgagttat 559  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  17363573 ttctgttagttttattcaaataaacgttagggtttgtgttat 17363532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 500 - 559
Target Start/End: Complemental strand, 17359538 - 17359479
Alignment:
Q  500 gttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttat 559  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17359538 gttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttat 17359479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 421 - 567
Target Start/End: Original strand, 36423391 - 36423533
Alignment:
Q  421 tctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcattt 519  Q
    |||||||||||||||||   ||  ||||||||||||||| ||||| || |||||||| | ||||||||  ||||||||| ||| | || ||| ||  |||    
T  36423391 tctaactatttaattgg---cattagattggtcctctaactaaaaattaatttattttggtcctctaa--gtttctcactgttgccacttttggttcttt 36423485  T
Q  520 ctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  36423486 ctgttagttttattcaaataaacgttaggatttgtgttatgtgggtcc 36423533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 420 - 565
Target Start/End: Complemental strand, 41752079 - 41751938
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||  ||||||||  ||||||  | ||||| | |||||||  ||    
T  41752079 ctctaactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcagtcctctaa--gtttctatctgttaccatatttagttctt 41751985  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||| |||||||||| |||||||||  | |||||||||    
T  41751984 tctgttagttttaatcaaataaacattagggtttatgctatgtgggt 41751938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 394 - 553
Target Start/End: Original strand, 8416482 - 8416634
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtt 492  Q
    |||||||||||||||||||| |||||||  ||||||||||||||| || ||   ||| |||||||| ||||| ||||||||||||| |||  |||  |||    
T  8416482 aaaggctaaattacctttttggtcctct--aactatttaattggtatcgga---ttgatcctctaactaaaaattgatttatttcggtcccttaa--gtt 8416574  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    |||||| |||||||||||||||||||||  |||  |||| | ||| |||||||||||||||    
T  8416575 tctcactgttactacatttagtcatttccattaaatttaattaaa-aaacgttagggtttg 8416634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 446 - 559
Target Start/End: Complemental strand, 8542904 - 8542793
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    ||||| |||||||| ||||| ||||||||||| | ||||||||  ||||||||| || |||||||||| || ||||||| ||||||||||||||||| ||    
T  8542904 gattgatcctctaactaaaaattgatttattttggtcctctaa--gtttctcactgtgactacatttaatcctttctgt-agttttattcaaataaatgt 8542808  T
Q  545 tagggtttgagttat 559  Q
    ||||||||| |||||    
T  8542807 tagggtttgtgttat 8542793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 446 - 526
Target Start/End: Original strand, 36674019 - 36674098
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttag 526  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||  |||| ||||||||||||||||||||| ||||||||||    
T  36674019 gattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttttcaccgttactacatttagtcctttctgttag 36674098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 392 - 546
Target Start/End: Complemental strand, 36283661 - 36283512
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    ||||||| |||||||| ||||||||  |||||||||||||||||||| || ||   ||| |||||||| ||||| ||||||||||||  |||  ||||      
T  36283661 aaaaaggttaaattacattttttgt--tctctaactatttaattggtatcggat--ttgatcctctaactaaaaattgatttatttccgtcccttaaa-- 36283568  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgtta 546  Q
    |||||||| |||||||||||||||||||| |||||  |||| | ||| ||||||||    
T  36283567 tttctcactgttactacatttagtcatttttgttaaatttaattaaaaaaacgtta 36283512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 488 - 565
Target Start/End: Complemental strand, 33716948 - 33716872
Alignment:
Q  488 aagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||  ||||||||||| |||||||| ||||| |||| |||||||||||||||||||| | |||||||||||    
T  33716948 aagtttctcattgttactacatt-agtcatttatgttaattttgttcaaataaacgttagggttggtgttatgtgggt 33716872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 525
Target Start/End: Original strand, 36282786 - 36282908
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||| ||||| |||||||  ||||||||||||||| |||||   |||||||| ||| ||||| ||||||||||||| |||  |||  ||||||    
T  36282786 ggctaaattacatttttagtcctct--aactatttaattggtatcaga---ttggtcctttaactaaaaattgatttatttcggtcccttaa--gtttct 36282878  T
Q  496 caccgttactacatttagtcatttctgtta 525  Q
    |||||||||||||||| ||| |||| ||||    
T  36282879 caccgttactacatttggtcttttccgtta 36282908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 531
Target Start/End: Original strand, 4155597 - 4155726
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||||||||| |||||||  ||||||||||||||| || |    ||| |||||||| ||||| ||||||||||| | ||||||||  ||||     
T  4155597 aggcttaattacctttttggtcctct--aactatttaattggtatcggt---ttgatcctctaactaaaaattgatttattttggtcctctaa--gttta 4155689  T
Q  495 tcaccgttactacatttagtcatttctgttagtttta 531  Q
    |||||||||||| |||| ||| |||||||||||||||    
T  4155690 tcaccgttactatatttcgtcctttctgttagtttta 4155726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 548
Target Start/End: Original strand, 41891966 - 41892111
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||| ||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||| ||||| |||  |||  ||||||    
T  41891966 ggctaaattacttttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttctttcggtcccttaa--gtttct 41892058  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagg 548  Q
     |  |||||||||||||||| |||||||||  |||||| ||| ||||||||||    
T  41892059 taatgttactacatttagtcctttctgttaaatttatttaaaaaaacgttagg 41892111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 9783917 - 9783979
Alignment:
Q  52 cgactaagaaactcaaaatcactattaaagacataaaaa-atgagtaaaaattgcatttcaga 113  Q
    |||| ||||||||||||||| ||| ||||  |||||||| |||||||||||||||||||||||    
T  9783917 cgacaaagaaactcaaaatcgctactaaatccataaaaatatgagtaaaaattgcatttcaga 9783979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 497 - 563
Target Start/End: Original strand, 38447600 - 38447665
Alignment:
Q  497 accgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    |||||||||||||||| |||||||| | | |||||||||||||||  || ||||||| |||||||||    
T  38447600 accgttactacatttaatcatttctttaaattttattcaaataaatatt-gggtttgtgttatgtgg 38447665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 500 - 565
Target Start/End: Original strand, 40673105 - 40673169
Alignment:
Q  500 gttactacatttagtcatttctgttagttttattcaaataa--acgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||| ||||||||||||   |||||||||  |||||||| |||| |||||||||||    
T  40673105 gttactacatttagtcctttctgttagtt---ttcaaataaacacgttaggatttgtgttatgtgggt 40673169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 4e-52; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 16038245 - 16038080
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||||||||| |||||||  ||||||||| ||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||    
T  16038245 aggctaaattacctttttggtcctct--aactatttagttggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttc 16038153  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16038152 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 16038080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 392 - 567
Target Start/End: Original strand, 8591964 - 8592133
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    |||||||||||||||||||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |    
T  8591964 aaaaaggctaaattacctttttagtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--g 8592056  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8592057 tttctcaccgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 8592133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 53751352 - 53751188
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||||||||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||    
T  53751352 ggctaaattacctttttggtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttct 53751260  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||    
T  53751259 cactgttactacatttagtcatttctgttagttttattcaaataaacgttatgatttgtgttatgtgggtcc 53751188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 394 - 567
Target Start/End: Original strand, 14985328 - 14985495
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtt 492  Q
    |||||||||||||||||||| |||  |||||||||||||||||||   |  ||||||||||||||| | ||||||||||||||||| ||||||  |||||    
T  14985328 aaaggctaaattacctttttggtc--ctctaactatttaattggt---attagattggtcctctaactaaaaattgatttatttcggtcctct--aagtt 14985420  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  14985421 tctcaccattactacatttagtcctttctgttagttttattcaaataaacgttagggttcgtgttatgtgggtcc 14985495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 395 - 567
Target Start/End: Complemental strand, 19088793 - 19088627
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    ||||||||||||||||||| |||||||  ||||||||||||||| |||||   ||  |||||||| ||||| ||||||||||||| ||||||||  ||||    
T  19088793 aaggctaaattacctttttggtcctct--aactatttaattggtatcaga---ttaatcctctaactaaaaattgatttatttcggtcctctaa--gttt 19088701  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19088700 ctcactgttactatatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 19088627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 397 - 565
Target Start/End: Original strand, 44991279 - 44991441
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||    
T  44991279 ggcttaattacctttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttct 44991371  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  44991372 caccgttactacatttagtcatttctgttagttttattcaaataaatgttagggtttgtgttatgtgggt 44991441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 395 - 565
Target Start/End: Original strand, 46849667 - 46849831
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||||| |||||||||||| |||||||  ||||||||| ||||| |||||   |||||||||||| ||||| ||||||||||||||||||||||  ||||    
T  46849667 aaggcttaattacctttttcgtcctct--aactatttagttggtatcaga---ttggtcctctaactaaaaattgatttatttcgatcctctaa--gttt 46849759  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  46849760 ctcactgttactatatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggt 46849831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 396 - 565
Target Start/End: Complemental strand, 24898640 - 24898477
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||| |||||||||||||  ||||||||||||||| |  ||   |||||||||||| ||||| ||||||||||| ||||||||||  |||||    
T  24898640 aggcttaattactttttttgtcctct--aactatttaattggtattgga---ttggtcctctaactaaaaattgatttattttgatcctctaa--gtttc 24898548  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24898547 tcaccgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggt 24898477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 420 - 567
Target Start/End: Original strand, 6711984 - 6712127
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||||||||||||||||||||||| ||    
T  6711984 ctctaactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttactacatttagtcctt 6712078  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    | ||||||||||||||||||||||||||||||||  |||||||||||||    
T  6712079 tatgttagttttattcaaataaacgttagggtttctgttatgtgggtcc 6712127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 395 - 565
Target Start/End: Complemental strand, 14985783 - 14985619
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||||| |||||||||||| |||||||  |||||||||||| || |||||   |||||| ||||| ||||| ||||||||||| ||||||||||  ||||    
T  14985783 aaggcttaattacctttttggtcctct--aactatttaatttgtatcaga---ttggtcatctaactaaaaattgatttattttgatcctctaa--gttt 14985691  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14985690 ctcactgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggt 14985619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 39448938 - 39448774
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||||||||| |||||||  ||||||||||||||| || ||   ||| |||||||| ||||| ||||||||||||| ||||||||  ||||||    
T  39448938 ggctaaattacctttttggtcctct--aactatttaattggtatcgga---ttgatcctctaactaaaaattgatttatttcggtcctctaa--gtttct 39448846  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  39448845 caccgttactacatttagtcatttttgttagttttattcaaataaacgttagagtttgtgttatctgggtcc 39448774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 421 - 563
Target Start/End: Original strand, 43566400 - 43566538
Alignment:
Q  421 tctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcattt 519  Q
    |||||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||||||||||||||| ||||||||||    
T  43566400 tctaactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttactacaattagtcattt 43566494  T
Q  520 ctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    || ||||||||||||||||||||||||||||||| |||||||||    
T  43566495 ctattagttttattcaaataaacgttagggtttgtgttatgtgg 43566538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 398 - 567
Target Start/End: Complemental strand, 53259587 - 53259424
Alignment:
Q  398 gctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctc 496  Q
    ||||||||| |||||| |||||||  ||||||||||||||| |||||   ||| |||||||| ||||| ||||||||||||| ||||||||  |||||||    
T  53259587 gctaaattatctttttggtcctct--aactatttaattggtatcaga---ttgatcctctaactaaaaattgatttatttcggtcctctaa--gtttctc 53259495  T
Q  497 accgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||| ||||    
T  53259494 accgttactacatttagtcatttctgttagttttattcaaatacacgttagagtttgtgttatgtgagtcc 53259424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 395 - 567
Target Start/End: Complemental strand, 25182264 - 25182098
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||||||||||| |||||| ||| |||  ||||||||| ||||| |||||   ||| |||||||| ||||| ||||||||||||| ||||||||  ||||    
T  25182264 aaggctaaattatctttttggtcttct--aactatttagttggtatcaga---ttgatcctctaactaaaaattgatttatttcggtcctctaa--gttt 25182172  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  25182171 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgtttgagtttgtgttatgtgggtcc 25182098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 395 - 567
Target Start/End: Complemental strand, 33091905 - 33091739
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagttt 493  Q
    |||| |||||||| ||||| |||||||  |||||||||||| ||   |  ||||||||||||||| | ||||||||||||||||  || |||  ||||||    
T  33091905 aaggttaaattacatttttagtcctct--aactatttaattagt---attagattggtcctctaactaaaaattgatttatttcagtcatct--aagttt 33091813  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33091812 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 33091739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 402 - 562
Target Start/End: Complemental strand, 50769266 - 50769112
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| || ||   ||| |||||||| ||||| ||||||||||||||||||||||  |||||||||||    
T  50769266 aattacctttttggtcctct--aactatttaattggtatcgga---ttgatcctctaactaaaaattgatttatttcgatcctctaa--gtttctcaccg 50769174  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtg 562  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||    
T  50769173 ttactacatttagtcatttcttttagttttattcaaataaacgttagggtttttgttatgtg 50769112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 21763632 - 21763467
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||| ||||| |||||||  ||||||||||||||| |   |||||| ||||||||| ||||| ||||||||||||| ||||||||  |||||    
T  21763632 aggctaaattacatttttggtcctct--aactatttaattggtat---aagattagtcctctaactaaaaattgatttatttcggtcctctaa--gtttc 21763540  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||| ||||||||||||| || ||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  21763539 tcactgttactacatttaatcctttctgttagttttattcaaataaacgttagagtttgtgttatgtgggtcc 21763467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 400 - 567
Target Start/End: Original strand, 24898192 - 24898353
Alignment:
Q  400 taaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcac 498  Q
    |||||||| ||||| |||||||  ||||||||||||||| || ||   ||| |||||||||||||| ||||||||||||| ||||||||  |||||||||    
T  24898192 taaattacatttttggtcctct--aactatttaattggtatcgga---ttgatcctctaattaaaaattgatttatttcggtcctctaa--gtttctcac 24898284  T
Q  499 cgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  24898285 cgttactacatttagtcctttctgttagttttattcaaataaacgttagagtttgtgttatgtgcgtcc 24898353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 42855790 - 42855625
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||||||||| |||   | ||||||||||||| || ||    ||||||||||| || | ||||||||||||||||| ||||||  |||||||    
T  42855790 aggctaaattacctttttagtc--atttaactatttaattagtatc---ggattggtcctccaactaaaaattgatttatttcggtcctct--aagtttc 42855698  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42855697 tcaccgttactacatttagtcttttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 42855625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 15478095 - 15477931
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||||||||| ||| |||  ||||||||||||||| || ||   |||||||||||| ||||| |||||| |||||| ||||||||  ||||||    
T  15478095 ggctaaattacctttttggtcttct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgattaatttcggtcctctaa--gtttct 15478003  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||| ||||||||    
T  15478002 caccgttactacatttagtcttttctgttagttttattcaaataaacgttagagtttgtgttacgtgggtcc 15477931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 38339492 - 38339656
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  |||||||||| |||| |||||   |||||||||||| ||||| ||||||||||| | ||||||||  ||||||    
T  38339492 ggctgaattacctttttggtcctct--aactatttaactggtatcaga---ttggtcctctaactaaaaattgatttatttaggtcctctaa--gtttct 38339584  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  38339585 caccgttgctacatttagtcctttcggttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 38339656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 402 - 562
Target Start/End: Original strand, 30683531 - 30683686
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| |||||   ||| ||||| |||||||| ||||||||||||| ||||||||  |||||||||||    
T  30683531 aattacctttttggtcctct--aactatttaattggtatcaga---ttgatcctccaattaaaaattgatttatttcggtcctctaa--gtttctcaccg 30683623  T
Q  501 ttactacatttagtcatttctgttag-ttttattcaaataaacgttagggtttgagttatgtg 562  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||    
T  30683624 ttactacatttagtcatttctgttagtttttattcaaataaacgttagagtttgtgttatgtg 30683686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 421 - 567
Target Start/End: Complemental strand, 46850097 - 46849955
Alignment:
Q  421 tctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcattt 519  Q
    |||||||||| ||||||| |||||   || ||||||||| ||||| ||||||||||||| ||||||||  |||| ||||||||||||||||||||| |||    
T  46850097 tctaactattaaattggtatcaga---ttagtcctctaactaaaaattgatttatttcggtcctctaa--gtttatcaccgttactacatttagtccttt 46850003  T
Q  520 ctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  46850002 ctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 46849955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 397 - 565
Target Start/End: Original strand, 8398031 - 8398193
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  ||||||||| ||||| |||||   |||||||||||| ||||| ||||||||||||||||||||||   |||||    
T  8398031 ggcttaattacctttttggtcctct--aactatttagttggtatcaga---ttggtcctctaactaaaaattgatttatttcgatcctctaac--tttct 8398123  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||  |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  8398124 cattgttactacatttagtcatttctattagttttattcaaataaatgttagggtttgtgttatgtgggt 8398193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 1433722 - 1433557
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||| ||||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||| | ||||||||   ||||    
T  1433722 aggctaaattacatttttggtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaattgatttattttggtcctctaat--tttc 1433630  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||||||||||| ||||| |||||||||||||    
T  1433629 tcactgttactacatttagtcttttctattagttttattcaaataaacgttagagtttgtgttatgtgggtcc 1433557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 394 - 565
Target Start/End: Original strand, 15477642 - 15477807
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaa-attgatttatttcgatcctctaaaagtt 492  Q
    ||||||| |||||||||||| |||||||  ||||||||||||||| || ||   |||||||||||| |||| |||||||||||||| ||||||||  |||    
T  15477642 aaaggcttaattacctttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaacattgatttatttcggtcctctaa--gtt 15477734  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||| |||||||||||||||||  |||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  15477735 tctcatcgttactacatttagtccattctgttagttttattaaaataaacgttagtgtttgtgttatgtgggt 15477807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 402 - 565
Target Start/End: Original strand, 42855344 - 42855501
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||| ||||| || ||    ||||||||||| ||||| ||||||||||||| ||||||||  |||||||||||    
T  42855344 aattacctttttggtcctct--aactatttagttggtatcggag---tggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccg 42855436  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  42855437 ttactacatttagtcctttctgttagttttattcaaataaaggttagggtttgtgttatgtgggt 42855501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 402 - 565
Target Start/End: Original strand, 43734291 - 43734448
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaatt-gatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| | ||||||||||| ||||||||  ||||||||| |    
T  43734291 aattacctttttggtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaatagatttatttcggtcctctaa--gtttctcactg 43734383  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||| |||| |||||||||||    
T  43734384 ttactacatttagtcctttatgttagttttattcaaataaacgttaggatttgtgttatgtgggt 43734448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 402 - 561
Target Start/End: Original strand, 53750907 - 53751060
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||| ||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||||| |    
T  53750907 aattacctttttagtcctct--aactattaaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcactg 53750999  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  53751000 ttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgt 53751060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 446 - 567
Target Start/End: Complemental strand, 30683934 - 30683814
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||  ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  30683934 gattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttcgcaccgttattacatttagtcctttctgttagttttattcaaataaacgt 30683837  T
Q  545 tagggtttgagttatgtgggtcc 567  Q
    ||||||||| |||||||||||||    
T  30683836 tagggtttgtgttatgtgggtcc 30683814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 37206877 - 37206713
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||||||||||||  |||||||||||||||||| | |||||   || ||||||||| ||||| ||||||||||||| | ||||||  |||| |    
T  37206877 ggctaaattaccttttttgt--tctctaactatttaattgatatcaga---ttagtcctctaactaaaaattgatttatttcggttctctaa--gttttt 37206785  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    || |||||||||||||| || |||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  37206784 catcgttactacatttaatcttttctgttagttttattcaaataaacgttaggatttgtgttatgtgggtcc 37206713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 397 - 563
Target Start/End: Complemental strand, 38339942 - 38339782
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  ||||||||||||||| || ||   ||| |||||||| ||||| ||||||||||||||||||||||  |||||     
T  38339942 ggcttaattacctttttggtcctct--aactatttaattggtatcgga---ttgatcctctaactaaaaattgatttatttcgatcctctaa--gtttca 38339850  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    ||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||    
T  38339849 cactgttactacatttaatcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgg 38339782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 420 - 567
Target Start/End: Complemental strand, 43734715 - 43734572
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| |||| |||  |||||||||||||| ||||||||||| ||    
T  43734715 ctctaactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctataa--gtttctcaccgttattacatttagtcctt 43734621  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||||    
T  43734620 tctgttagttttattcaaataaacgttaagatttgtgttatgtgggtcc 43734572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 399 - 563
Target Start/End: Complemental strand, 52557535 - 52557377
Alignment:
Q  399 ctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctca 497  Q
    |||||||| |||||| |||||||  ||||||||||||||| |||||   |||||| ||||| ||||| ||||||||||| | |||||||||  |||||||    
T  52557535 ctaaattatctttttggtcctct--aactatttaattggtatcaga---ttggtcttctaactaaaaattgatttattttggtcctctaaa--tttctca 52557443  T
Q  498 ccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  ||||||||    
T  52557442 ccgttactacatttagtcctttctgttagttttattcaaataaacgttagagtttgtattatgtgg 52557377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 397 - 565
Target Start/End: Original strand, 53994934 - 53995096
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  ||||||||| ||||| |||||   |||||||| ||| ||||| ||||||||||||| |||| |||  ||||||    
T  53994934 ggcttaattacctttttggtcctct--aactatttagttggtatcaga---ttggtcctttaactaaaaattgatttatttcggtcctttaa--gtttct 53995026  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||| |||||||||||    
T  53995027 caccgttactacatttagtcttttctattagttttattcaaataaacgttagagtttgtgttatgtgggt 53995096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 396 - 567
Target Start/End: Original strand, 12817805 - 12817970
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||||||||| ||  |||||||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| |||| |||  ||||     
T  12817805 aggctaaattacctttttggt--tctctaactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctttaa--gttta 12817897  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||| |||||||||||||| | ||||| ||||||||||||||||||||||||| ||||| |||||||||||||    
T  12817898 tcactgttactacatttagccctttctattagttttattcaaataaacgttagagtttgtgttatgtgggtcc 12817970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 445 - 567
Target Start/End: Complemental strand, 19508820 - 19508699
Alignment:
Q  445 agattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacg 543  Q
    ||||||||||||||| ||||| ||||||||||||| ||||| ||  |||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  19508820 agattggtcctctaactaaaaattgatttatttcggtcctccaa--gtttctcacccttactacatttagtcctttctgttagttttattcaaataaacg 19508723  T
Q  544 ttagggtttgagttatgtgggtcc 567  Q
    |||| ||||| |||||||||||||    
T  19508722 ttagagtttgtgttatgtgggtcc 19508699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 44991729 - 44991564
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaatt-aaaattgatttatttcgatcctctaaaagtttc 494  Q
    ||||||||||| |||||| |||||||  ||||||||||||||| || ||   ||| |||||||| | ||||||||||||||||| ||||||||  |||||    
T  44991729 aggctaaattatctttttggtcctct--aactatttaattggtatcgga---ttgatcctctaactgaaaattgatttatttcggtcctctaa--gtttc 44991637  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||| |||| ||||||||||| ||| |||||||||| |||||||||||||||||||||| |||||||||||||    
T  44991636 tcactgttattacatttagtcttttttgttagttttgttcaaataaacgttagggtttgtgttatgtgggtcc 44991564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 420 - 567
Target Start/End: Complemental strand, 41752245 - 41752102
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| || ||   |||||||||||| ||||| || |||||||| | ||||||||  ||||||||| |||||||||| ||||| ||    
T  41752245 ctctaactatttaattggtatcgga---ttggtcctctaactaaaaattcatttattttggtcctctaa--gtttctcactgttactacatgtagtcctt 41752151  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41752150 tctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 41752102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 402 - 565
Target Start/End: Original strand, 52557092 - 52557249
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| || |||  |||||||||||| ||||| ||||||||||||| |||| |||  |||||| || |    
T  52557092 aattacctttttggtcctct--aactatttaattggtatc-gaa--ttggtcctctaactaaaaattgatttatttcggtcctataa--gtttcttactg 52557184  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  52557185 ttactacatttagtcttttctgttagttttattcaaataaacgttagagtttgtgttatgtgggt 52557249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 448 - 565
Target Start/End: Original strand, 53259184 - 53259300
Alignment:
Q  448 ttggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgtta 546  Q
    |||||||||||| ||||| || ||| |||||| ||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  53259184 ttggtcctctaactaaaaattaattaatttcggtcctctaa--gtttctcactgttactacatttagtcatttctgttagttttattcaaataaacgtta 53259281  T
Q  547 gggtttgagttatgtgggt 565  Q
    ||||||| |||||||||||    
T  53259282 gggtttgtgttatgtgggt 53259300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 393 - 547
Target Start/End: Original strand, 55022280 - 55022427
Alignment:
Q  393 aaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagt 491  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||| |||||   ||| |||||||| ||||| ||||||||||||||||||||||  ||    
T  55022280 aaaaggctaaattacctttttggtcctct--aactatttaattggtatcaga---ttgatcctctaactaaaaattgatttatttcgatcctctaa--gt 55022372  T
Q  492 ttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttag 547  Q
    ||||||| ||||||||||||| || ||||||||||||||||| |||||||||||||    
T  55022373 ttctcactgttactacattta-tcctttctgttagttttattaaaataaacgttag 55022427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 396 - 565
Target Start/End: Original strand, 16037793 - 16037956
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||| ||||| |||||||  ||||||||| ||||| |||||   |||||||||||| ||||| ||||||||||| | ||||||||  |||||    
T  16037793 aggcttaattacatttttggtcctct--aactatttagttggtatcaga---ttggtcctctaactaaaaattgatttattttggtcctctaa--gtttc 16037885  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  16037886 tcactgttactacatttagtcctttctgttagttttattcaaataaacgttagagtttgtgttatatgggt 16037956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 445 - 565
Target Start/End: Original strand, 33091496 - 33091615
Alignment:
Q  445 agattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacg 543  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||||  |||||||||| ||||| ||||||||| ||||||||||||||||||||||||||     
T  33091496 agattggtcctctaactaaaaattgatttattttgatcctctaa--gtttctcaccattactgcatttagtcttttctgttagttttattcaaataaaca 33091593  T
Q  544 ttagggtttgagttatgtgggt 565  Q
    |||||||||| |||||||||||    
T  33091594 ttagggtttgtgttatgtgggt 33091615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 6505581 - 6505698
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||  ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||    
T  6505581 gattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcactgttactacatttagtcctttctgttagttttattcaaataaa-gt 6505677  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| |||||||||||    
T  6505678 tagggtttgtgttatgtgggt 6505698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 565
Target Start/End: Complemental strand, 8592375 - 8592257
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||| | ||||||||  |||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  8592375 gattggtcctctaactaaaaattgatttattttggtcctctaa--gtttctcaccgttactacatttagtcctttctgtttgttttattcaaataaacgt 8592278  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| ||||| |||||    
T  8592277 tagggtttgtgttatatgggt 8592257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 395 - 563
Target Start/End: Complemental strand, 23756252 - 23756090
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||| |||||||| ||||| |||||||  ||||||||||||||| || ||   |||||||| ||| ||||| || |||||||| | ||||||||  ||||    
T  23756252 aaggttaaattacatttttggtcctct--aactatttaattggtatcgga---ttggtcctttaactaaaaattaatttattttggtcctctaa--gttt 23756160  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  23756159 ctcaccgttactatatttagtcatttctgttagttttattcaaataaatgttagggtttgcgttatgtgg 23756090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 396 - 563
Target Start/End: Complemental strand, 624130 - 623969
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||| ||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||    
T  624130 aggctaaattacatttttggtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttc 624038  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    |||  |||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| |||||||||    
T  624037 tcattgttactacatttagtcctttctgttagttttattcaaataaatgttagagtttgtgttatgtgg 623969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 396 - 563
Target Start/End: Original strand, 44957388 - 44957549
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||  ||||| |||||||  |||||||| |||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||    
T  44957388 aggctaaattatatttttggtcctct--aactattttattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttc 44957480  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    |||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||    
T  44957481 tcactgttactgcatttagtcctttatgttagttttattcaaataaacgttagggtttgtgttatgtgg 44957549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 462 - 561
Target Start/End: Original strand, 50508518 - 50508615
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    ||||||||||||||||| |||| |||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  50508518 aaaattgatttatttcggtcctttaa--gtttctcaccgttactacatttagtcatttttgttagttttattcaaataaacgttagggtttgtgttatgt 50508615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 395 - 563
Target Start/End: Original strand, 50768819 - 50768981
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||||| ||||||||||||  |||| |  ||||||||||||||| || |||  |||||| ||||| ||||| ||||||||||||| ||||||||  ||||    
T  50768819 aaggcttaattacctttttgatccttt--aactatttaattggtatc-gaa--ttggtcatctaactaaaaattgatttatttcggtcctctaa--gttt 50768911  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  50768912 ctcaccgttactacatttagtactttctattagttttattcaaataaacgttagggtttgtgttatgtgg 50768981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 393 - 565
Target Start/End: Complemental strand, 6712415 - 6712251
Alignment:
Q  393 aaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaatta-aaattgatttatttcgatcctctaaaagt 491  Q
    |||||||| |||||||||||| |||   ||||||||||||||||||   |   ||||| |||||||| || |||||||||||||||| |||||||||       
T  6712415 aaaaggcttaattacctttttggtc---tctaactatttaattggt---aatggattgatcctctaactacaaattgatttatttcggtcctctaaa--- 6712325  T
Q  492 ttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    || |||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||    
T  6712324 ttttcactgttactacatttagtcctttctgttagttttattcaaataaacgttaggatttgtgttatgtgggt 6712251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 420 - 563
Target Start/End: Original strand, 20888164 - 20888303
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| || ||   ||| |||||||| ||||| ||||||||||||| ||||||||  ||||||||| |||||| ||||||||||||    
T  20888164 ctctaactatttaattggtatcgga---ttgatcctctaactaaaaattgatttatttcggtcctctaa--gtttctcactgttactgcatttagtcatt 20888258  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    |||||||||||||||||||| || ||||||||||| |||||||||    
T  20888259 tctgttagttttattcaaatgaatgttagggtttgtgttatgtgg 20888303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 446 - 567
Target Start/End: Complemental strand, 43566784 - 43566664
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||  || | |  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43566784 gattggtcctctaactaaaaattgatttatttcagtctttt--aagtttctcaccgttactacatttagtcatttctgttagttttatttaaataaacgt 43566687  T
Q  545 tagggtttgagttatgtgggtcc 567  Q
    |||| |||| |||||||||||||    
T  43566686 taggatttgtgttatgtgggtcc 43566664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 53995386 - 53995220
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||||||||| |||||||  ||||||||||||||| ||  |   || ||||||||| ||||| ||||||||||||| ||||||||  |||||    
T  53995386 aggctaaattacctttttggtcctct--aactatttaattggtatcgca---ttagtcctctaactaaaaattgatttatttcggtcctctaa--gtttc 53995294  T
Q  495 tcaccgttactacatttagtc--atttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||   ||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  53995293 tcaccgttactacatttagtcctttttatgttagttttattcaaat-aacgttagggtttgtgttatgtgggtcc 53995220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 446 - 566
Target Start/End: Complemental strand, 12818212 - 12818093
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    ||||||| |||||| ||||| ||||||||||||| ||||||||  ||||||||  |||||||||||||||| ||| ||||||||||||||||||||||||    
T  12818212 gattggtgctctaactaaaacttgatttatttcggtcctctaa--gtttctcattgttactacatttagtcctttttgttagttttattcaaataaacgt 12818115  T
Q  545 tagggtttgagttatgtgggtc 566  Q
    ||||||||| ||||||||||||    
T  12818114 tagggtttgtgttatgtgggtc 12818093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 420 - 565
Target Start/End: Original strand, 19508433 - 19508575
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaa-aattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| || ||   |||||||||||| ||| ||||||||||| |||  |||||||  ||||||||| || ||||||||||||||||    
T  19508433 ctctaactatttaattggtatcgga---ttggtcctctaactaacaattgatttatgtcggccctctaa--gtttctcactgtgactacatttagtcatt 19508527  T
Q  519 tctgttagttttattcaaataaacgtta-gggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  19508528 tctgttagttttattcaaataaacgttaggggtttgtgttatgtgggt 19508575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 462 - 563
Target Start/End: Original strand, 37206488 - 37206587
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    ||||||||||||||||| ||||||||  |||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  37206488 aaaattgatttatttcggtcctctaa--gtttttcactgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgt 37206585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 396 - 549
Target Start/End: Complemental strand, 44125921 - 44125774
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||| ||||| ||| |||  |||||||||||||||||| ||   |||||| ||||| ||||| ||||||||||| | ||||||||  |||||    
T  44125921 aggctaaattacatttttggtcatct--aactatttaattggtgtcgga---ttggtcttctaactaaaaattgatttattttggtcctctaa--gtttc 44125829  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttaggg 549  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44125828 tcactgttattacatttagtcatttctgttagttttattcaaataaacgttaggg 44125774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 420 - 565
Target Start/End: Original strand, 19088362 - 19088503
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||| ||||| || |||   || |||||||| ||||| ||||||||||||| ||||||||  ||||   ||||||||||||||||||| ||    
T  19088362 ctctaactatttagttggtatcggaa---tgatcctctaactaaaaattgatttatttcggtcctctaa--gtttaataccgttactacatttagtcctt 19088456  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  19088457 tctgttagttttattcaaataaacgttagggtttgtgttatgtgggt 19088503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 394 - 546
Target Start/End: Complemental strand, 25269453 - 25269307
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtt 492  Q
    ||||||| |||||| ||||| |||||||  ||||||||||||||| || ||   ||| |||||||| ||||| ||||||||||||| ||||||||  |||    
T  25269453 aaaggcttaattacttttttggtcctct--aactatttaattggtatcgga---ttgatcctctaactaaaaattgatttatttcggtcctctaa--gtt 25269361  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgtta 546  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  25269360 tctcactgttactacatttagtcctttctgttagttttattcaaataaacgtta 25269307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 420 - 565
Target Start/End: Original strand, 39448509 - 39448650
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| || |||  |||||||||||| ||||| ||||||||||||| |||| |||  |||||||||||||||||||||||||| ||    
T  39448509 ctctaactatttaattggtatc-gaa--ttggtcctctaactaaaaattgatttatttcggtcctttaa--gtttctcaccgttactacatttagtcctt 39448603  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    | ||||||||||||| |||||| |||||| ||||| |||||||||||    
T  39448604 tttgttagttttatttaaataagcgttagagtttgtgttatgtgggt 39448650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 50508908 - 50508743
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||||||||| |||||| ||  | ||||| |||||||||||| |||||   |||||| ||||| ||||| ||||||||||| | ||||||||  ||||     
T  50508908 aggctaaattatctttttggt--tttctaattatttaattggtatcaga---ttggtcatctaactaaaaattgatttattttggtcctctaa--gtttt 50508816  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||  |||||||||||||    
T  50508815 tcaccgttactgcatttagtcttttctgttagttttattcaaataaacgttatggtttatgttatgtgggtcc 50508743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 446 - 562
Target Start/End: Original strand, 1433315 - 1433430
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||| | | ||||||  |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  1433315 gattggtcctctaactaaaaattgatttattttggttctctaa--gtttctcatcgttattacatttagtcctttctgttagttttattcaaataaacgt 1433412  T
Q  545 tagggtttgagttatgtg 562  Q
    ||||||||| ||||||||    
T  1433413 tagggtttgtgttatgtg 1433430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 396 - 559
Target Start/End: Complemental strand, 36122883 - 36122727
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||| |||||  ||||||  ||||||||||||||| || ||   |||||||||||| ||||| |||||| |||||| ||||||||  |||||    
T  36122883 aggctaaattacatttttgatcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatt-atttcggtcctctaa--gtttc 36122792  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttat 559  Q
    |||| |||| ||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||    
T  36122791 tcactgttattacatttagtcatttctattagttttattcaaataaacgttagagtttgtgttat 36122727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 392 - 565
Target Start/End: Original strand, 41751813 - 41751978
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    ||||||||| |||||||||||| ||||| |  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||| | || |    |||    
T  41751813 aaaaaggcttaattaccttttt-gtccttt--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttattttggtcttt---aag 41751903  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||| |||||||||||||||| || |||||||||||||||||||||| ||||||||||| |||||||||||    
T  41751904 tttctcactgttactacatttagtctttactgttagttttattcaaataaatgttagggtttgtgttatgtgggt 41751978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 41877903 - 41878017
Alignment:
Q  445 agattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacg 543  Q
    ||||||||| ||||| ||||| ||||||||||||| ||||||||    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |    
T  41877903 agattggtcatctaactaaaaattgatttatttcggtcctctaag---ttctcactgttactacatttagtcctttctgttagttttattcaaataaatg 41877999  T
Q  544 ttagggtttgagttatgt 561  Q
    |||||||||| |||||||    
T  41878000 ttagggtttgtgttatgt 41878017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 25181856 - 25181974
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||| ||| ||||| ||||||||||| | || |||||  ||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||    
T  25181856 gattggtcctttaactaaaaattgatttattttggtcttctaa--gtttctcactgttattacatttagtcatttctgttagttttattcaaataaatgt 25181953  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| ||||| |||||    
T  25181954 tagggtttgtgttatatgggt 25181974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 402 - 565
Target Start/End: Original strand, 36122438 - 36122595
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||   |||||||||||||| ||   ||||||||||||||| | |||||||||||||||   || |||  |||||| |||| |    
T  36122438 aattacctttttggtcctctg--actatttaattggtatc---agattggtcctctaactaaaaattgatttatttttgtcatct--aagtttttcactg 36122530  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||| || ||| ||||||||||||||||||||||||||| ||||| |||||||||||    
T  36122531 ttactacatttaatcctttatgttagttttattcaaataaacgttagagtttgtgttatgtgggt 36122595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 41878309 - 41878145
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||| ||||| |||||||  |||||| |||||||  |||||   || ||||||||| ||||| |||||||||| || ||||||||  |||||    
T  41878309 aggctaaattacttttttggtcctct--aactatataattggaatcaga---ttagtcctctaactaaaaattgatttattgcggtcctctaa--gtttc 41878217  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||| ||||||||||| |||| |||||| |||||||||||||||||| ||||||||||  |||||||||||||    
T  41878216 tcactgttactacatt-agtcctttctgctagttttattcaaataaatgttagggtttatgttatgtgggtcc 41878145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 21763224 - 21763343
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttag-ttttattcaaataaacg 543  Q
    ||||||||||| || ||||| ||||||||||||| ||||| |   |||| |||||||||||||||||||||||||||||| | |||||||||||||||||    
T  21763224 gattggtcctccaactaaaaattgatttatttcggtcctccag--gtttttcaccgttactacatttagtcatttctgtttgtttttattcaaataaacg 21763321  T
Q  544 ttagggtttgagttatgtgggt 565  Q
    |||| ||||| |||||||||||    
T  21763322 ttagagtttgtgttatgtgggt 21763343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 397 - 542
Target Start/End: Complemental strand, 44957807 - 44957668
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  ||||||||||||| | ||   | ||||||||| ||| | ||||||||||||||||||||||||  ||||||||    
T  44957807 ggcttaattacctttttggtcctct--aactatttaattgatatc---aaattggtcctttaactaaaaattgatttatttcgatcctct--aagtttct 44957715  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaac 542  Q
    |||  ||||||||||||||| ||||| ||||||||||||||||||||    
T  44957714 cacatttactacatttagtcctttctattagttttattcaaataaac 44957668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 623723 - 623841
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||| ||||||| | |||| |||  |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  623723 gattggtcctctaactaaaaattgttttattttggtcctataa--gtttcttaccgttactacatttagtcctttctgttagttttattcaaataaacgt 623820  T
Q  545 tagggtttgagttatgtgggt 565  Q
    || |||||  ||||| |||||    
T  623821 taaggtttatgttatatgggt 623841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 421 - 558
Target Start/End: Complemental strand, 49136065 - 49135928
Alignment:
Q  421 tctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcattt 519  Q
    |||||||||||||||||| |||||   ||| |||||||| ||||| ||||||||||||| |||| |||  ||||||||||||||||||||||||| ||||    
T  49136065 tctaactatttaattggtatcaga---ttgatcctctaactaaaaattgatttatttcggtcctttaa--gtttctcaccgttactacatttagttattt 49135971  T
Q  520 ct----gttagttttattcaaataaacgttagggtttgagtta 558  Q
    ||    || | |||||||||||||||||||||| |||| ||||    
T  49135970 ctttatgtcaattttattcaaataaacgttaggatttgtgtta 49135928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 446 - 563
Target Start/End: Original strand, 23755462 - 23755578
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| || |||||||||| | ||||||  |||||| | ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  23755462 gattggtcctctaactaaaaattaatttatttcggttctctaa--gtttcttatcgttactacatttagtcctttatgttagttttattcaaataaacgt 23755559  T
Q  545 tagggtttgagttatgtgg 563  Q
    ||  ||||| |||| ||||    
T  23755560 taaagtttgtgttacgtgg 23755578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 396 - 548
Target Start/End: Original strand, 47602942 - 47603088
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaatt-aaaattgatttatttcgatcctctaaaagtttc 494  Q
    ||||||||||| |||||| |||||||  ||||||||||||||| || ||   |||||||||||||| ||||||||||||||| | |||  |  |||||||    
T  47602942 aggctaaattatctttttggtcctct--aactatttaattggtatcgga---ttggtcctctaattaaaaattgatttattttggtccctt--aagtttc 47603034  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagg 548  Q
    |||| |||||||||||||||| |||| ||||  |||| | ||| ||||||||||    
T  47603035 tcactgttactacatttagtcctttccgttaaatttaattaaaaaaacgttagg 47603088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 396 - 515
Target Start/End: Complemental strand, 4513367 - 4513254
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||||||||| |||||||  ||||||||| ||||| || ||   ||| |||||||| ||||| || |||||||||| ||||||||  |||||    
T  4513367 aggctaaattacctttttggtcctct--aactatttagttggtatcgga---ttgatcctctaactaaaaattaatttatttcggtcctctaa--gtttc 4513275  T
Q  495 tcaccgttactacatttagtc 515  Q
    |||||||||||||||||||||    
T  4513274 tcaccgttactacatttagtc 4513254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 488 - 536
Target Start/End: Original strand, 44125707 - 44125755
Alignment:
Q  488 aagtttctcaccgttactacatttagtcatttctgttagttttattcaa 536  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44125707 aagtttctcaccgttactacatttaatcatttctgttagttttattcaa 44125755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 525
Target Start/End: Complemental strand, 52692889 - 52692768
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||||||||| ||||| |  | ||||||||||| | ||    |||||||||||||| | ||||||||||||||| | |||  |  ||||||||    
T  52692889 ggctaaattacctttttggtccttt--agctatttaattgctatc----gattggtcctctaactaaaaattgatttattttggtccctt--aagtttct 52692798  T
Q  496 caccgttactacatttagtcatttctgtta 525  Q
    ||||||||||||||||||||||||| ||||    
T  52692797 caccgttactacatttagtcatttccgtta 52692768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 504
Target Start/End: Complemental strand, 47603812 - 47603710
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||||||||| |||  ||||||||||||||||||| ||   ||||||||||||||| | |||||| |||||||||| |||  |  |||||||    
T  47603812 aggctaaattacctttttggtc--ctctaactatttaattggtatc---agattggtcctctaactaaaaattaatttatttcggtccctt--aagtttc 47603720  T
Q  495 tcaccgttac 504  Q
    ||||||||||    
T  47603719 tcaccgttac 47603710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 478
Target Start/End: Original strand, 52692019 - 52692101
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcg 478  Q
    ||||| ||||||||| ||||||  ||||||  ||||||||||||||| ||   ||||||||||||||| | |||||||||||||||||    
T  52692019 aaaaaagctaaattatctttttgatcctct--aactatttaattggtatc---agattggtcctctaactaaaaattgatttatttcg 52692101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 487
Target Start/End: Complemental strand, 55022489 - 55022424
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaa 487  Q
    ||||||||||||||||||| || ||   ||  |||||||||||||| ||||||||||||||||||||||    
T  55022489 ctctaactatttaattggtatcgga---ttaatcctctaattaaaaattgatttatttcgatcctctaa 55022424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 1e-51; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 393 - 567
Target Start/End: Complemental strand, 1763128 - 1762960
Alignment:
Q  393 aaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagt 491  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||| ||| |   |||||||||||| ||||| ||||||||||||| ||||||||  ||    
T  1763128 aaaaggctaaattacctttttggtcctct--aactatttaattggtatcaaa---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gt 1763036  T
Q  492 ttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1763035 ttctcatcgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 1762960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 394 - 567
Target Start/End: Complemental strand, 45843570 - 45843403
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtt 492  Q
    ||||| |||||||| ||||| |||||||  |||||||||||||||   |  ||||||||||||||| | ||||||||||||||||||||||||  |||||    
T  45843570 aaaggttaaattacatttttggtcctct--aactatttaattggt---attagattggtcctctaactaaaaattgatttatttcgatcctct--aagtt 45843478  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  45843477 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 45843403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 392 - 567
Target Start/End: Complemental strand, 27548124 - 27547955
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||  |    
T  27548124 aaaatggctaaattaccttttttgtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--g 27548032  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  27548031 tttctcaccgttactacatttaatcctttctgttagttttattcaaataaacgttagggtttatggtatgtgggtcc 27547955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 392 - 565
Target Start/End: Complemental strand, 44323115 - 44322948
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    ||||| ||| |||||||||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |    
T  44323115 aaaaatgcttaattacctttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--g 44323023  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  44323022 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaatgttagggtttgtgttatgtgggt 44322948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 49140592 - 49140429
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaattgatttatttcgatcctctaaaagtttctc 496  Q
    |||||||||| |||||| |||||||  ||||||||||||||| |||||   || ||||||||| |||||||||||||||||| |||| |||  |||||||    
T  49140592 ggctaaattatctttttggtcctct--aactatttaattggtatcaga---ttagtcctctaactaaaattgatttatttcggtcctataa--gtttctc 49140500  T
Q  497 accgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    || |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  49140499 actgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 49140429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 12481510 - 12481345
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||||||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||    
T  12481510 aggctaaattacctttttggtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttc 12481418  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12481417 tcactgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 12481345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 421 - 567
Target Start/End: Complemental strand, 6798235 - 6798093
Alignment:
Q  421 tctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcattt 519  Q
    |||||||||||||||||| |||||   |||||||||||| ||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  6798235 tctaactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcgatcctctaaa--tttctcaccgttactacatttagtccttt 6798141  T
Q  520 ctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
     ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  6798140 atgttagttttattcaaataaacgttagggtttgtgttatgagggtcc 6798093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 386 - 567
Target Start/End: Complemental strand, 12127517 - 12127339
Alignment:
Q  386 tattataaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctc 484  Q
    ||||| ||| ||| |||||||| |||||| ||||||  ||||||||||||||| || ||  | |  |||||||||||||| ||||||||||||| |||||    
T  12127517 tattaaaaataggttaaattacattttttatcctct--aactatttaattggtatcggattagttctcctctaattaaaaattgatttatttcggtcctc 12127420  T
Q  485 taaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||  |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  12127419 taa--gtttctgaccgttactacatttagtcatttctgttagttttgttcaaataaacgttagggtttgtgttatgtgggtcc 12127339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 16023897 - 16024061
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||| ||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||    
T  16023897 ggctaaattacttttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttct 16023989  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||| ||||||    
T  16023990 caccgttactacatttagtcttttctgttagtcttattcaaataaacgttagggtttgtgttatgagggtcc 16024061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 395 - 565
Target Start/End: Original strand, 49140141 - 49140305
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||||| ||||| |||||| |||||||  ||||||||| ||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||    
T  49140141 aaggcttaattatctttttggtcctct--aactatttagttggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gttt 49140233  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||    
T  49140234 ctcaccgttactacatttagtcatttctcttagttttattcaaataaacgttagagtttgtgttatgtgggt 49140305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 395 - 567
Target Start/End: Complemental strand, 45053141 - 45052975
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    ||||||||||||| ||||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| || |||||  ||||    
T  45053141 aaggctaaattacttttttggtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcatctaa--gttt 45053049  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||  |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  45053048 ctcagtgttactacatttagtcctttctgttagttttattcaaataaacgttagagtttgtgttatgtgggtcc 45052975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 396 - 567
Target Start/End: Original strand, 37304027 - 37304192
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||||||||| |||||||  ||| ||||||||||| || ||   |||||||||||| ||||| ||||||||||||  ||||||||  |||||    
T  37304027 aggctaaattacctttttggtcctct--aaccatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcagtcctctaa--gtttc 37304119  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  37304120 tcaccgttactatatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgagggtcc 37304192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 396 - 565
Target Start/End: Original strand, 26707195 - 26707358
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| || ||||||||| |||||||  ||||||||||||||| |||||   | |||||||||| ||||| ||||||||||||| ||||||||  |||||    
T  26707195 aggcttaaatacctttttggtcctct--aactatttaattggtatcaga---tcggtcctctaactaaaaattgatttatttcggtcctctaa--gtttc 26707287  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||    
T  26707288 tccccgttactacatttagtcatttctgttagttttattcaaataaacgttggagtttgtgttatgtgggt 26707358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 397 - 565
Target Start/End: Complemental strand, 37576631 - 37576469
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  ||||||||| ||||| |||||   |||||||||||| ||||| ||||||||||||| | ||||||  ||||||    
T  37576631 ggcttaattacctttttggtcctct--aactatttagttggtatcaga---ttggtcctctaactaaaaattgatttatttcggttctctaa--gtttct 37576539  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  37576538 cactgttactacatttagtcttttctgttagttttattcaaataaacattagggtttgtgttatgtgggt 37576469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 420 - 565
Target Start/End: Original strand, 49643692 - 49643833
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||||| |||||||||||||||| ||    
T  49643692 ctctaactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcactgttactacatttagtcctt 49643786  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||    
T  49643787 tctgttagttttattcaaataaacattagggtttgtgttatgtgggt 49643833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 395 - 565
Target Start/End: Complemental strand, 16024349 - 16024185
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||||| |||||| ||||| |||||||  ||||||||||||||| || ||   ||| |||||||| ||||| ||||||||||||| ||||||||  ||||    
T  16024349 aaggcttaattacttttttggtcctct--aactatttaattggtatcgga---ttgatcctctaactaaaaattgatttatttcggtcctctaa--gttt 16024257  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||  |||||||||||    
T  16024256 ctcaccgttactacatttagtcctttctggtagttttattcaaataaacgttagggtttatgttatgtgggt 16024185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 457 - 567
Target Start/End: Complemental strand, 27400818 - 27400710
Alignment:
Q  457 taattaaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagt 556  Q
    |||| ||||||||||||||| | |||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  27400818 taataaaaattgatttattttgttcctctaaa--tttctcaccgttactacatttagtcttttctgttagttttattcaaataaacgttagggtttgtgt 27400721  T
Q  557 tatgtgggtcc 567  Q
    |||||||||||    
T  27400720 tatgtgggtcc 27400710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 390 - 563
Target Start/End: Original strand, 3089335 - 3089502
Alignment:
Q  390 ataaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaa 488  Q
    |||| ||||||||||||||||||  |||||||  ||||||||||||||  || ||   ||||| |||||| ||||| ||||||||||||| ||||||||     
T  3089335 ataataaggctaaattaccttttgggtcctct--aactatttaattggcatcgga---ttggtactctaactaaaaattgatttatttcggtcctctaa- 3089428  T
Q  489 agtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
     |||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||    
T  3089429 -gtttctcaccgttattacatttagtcctttctgttagtttaattcaaataaacgttagggtttgtgttatgtgg 3089502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 392 - 565
Target Start/End: Original strand, 4696877 - 4697044
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    ||||||||||||||| |||||| |||||||  ||||||||||||||| || ||   |||||||| ||| ||||| ||||||||||| | ||||||||  |    
T  4696877 aaaaaggctaaattatctttttagtcctct--aactatttaattggtatcgga---ttggtcctataactaaaaattgatttattttggtcctctaa--g 4696969  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  4696970 tttctcactgttactacatttagtcctttctgttagtttaattcaaataaacgttagagtttgtgttatgtgggt 4697044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 6797827 - 6797969
Alignment:
Q  419 tctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcat 517  Q
    |||||||||||||||||| | |||||   ||| || ||||||||||| ||||||||||||| ||||||||  |||||||||||||||| |||||||||||    
T  6797827 tctctaactatttaattgatatcaga---ttgatcttctaattaaaaattgatttatttcggtcctctaa--gtttctcaccgttactccatttagtcat 6797921  T
Q  518 ttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||| |||||||||||||||| ||||| |||||||||||    
T  6797922 ttctgttagttttgttcaaataaacgttagagtttgtgttatgtgggt 6797969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 12481103 - 12481221
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||| | ||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12481103 gattggtcctctaactaaaaattgatttattttggtcctctaa--gtttctcaccgttactacatttagtcctttctgttagttttattcaaataaacgt 12481200  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| ||||| |||||    
T  12481201 tagggtttgtgttatatgggt 12481221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 395 - 563
Target Start/End: Original strand, 25995782 - 25995944
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||| |||||||||||||| |||||||  ||||||||||||||| |||||   |||||||| ||||||||| ||||||||||||| |||| |||  ||||    
T  25995782 aaggataaattacctttttggtcctct--aactatttaattggtatcaga---ttggtcctttaattaaaaattgatttatttcggtcctttaa--gttt 25995874  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||  | |||| |||||||||    
T  25995875 ctcactgttactacatttagtcctttctgttagttttattcaaataaacgttgagatttgtgttatgtgg 25995944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 448 - 567
Target Start/End: Original strand, 31703660 - 31703778
Alignment:
Q  448 ttggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgtta 546  Q
    |||||||||||| ||||| ||||||||||||| |||| |||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  31703660 ttggtcctctaactaaaaattgatttatttcggtcctttaa--gtttctcaccgttactacatttagtcctttctgttagttttattcaaataaacgttg 31703757  T
Q  547 gggtttgagttatgtgggtcc 567  Q
    ||||||| |||||||||||||    
T  31703758 gggtttgtgttatgtgggtcc 31703778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 420 - 565
Target Start/End: Complemental strand, 37304457 - 37304316
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| ||    ||||| |||| ||| | ||||||||||||||||| ||||||  |||||||||||||||||||||||||||| ||    
T  37304457 ctctaactatttaattggtatc---ggattgatcctataactaaaaattgatttatttcggtcctct--aagtttctcaccgttactacatttagtcctt 37304363  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    | ||||||||||||||||||||||||||||||||| |||||||||||    
T  37304362 tatgttagttttattcaaataaacgttagggtttgtgttatgtgggt 37304316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 420 - 561
Target Start/End: Original strand, 37585714 - 37585851
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    |||||||||||||||||||   |  |||||| |||||||| | |||||||||||||||||||||||||||  ||||||||||||| || |||||||||||    
T  37585714 ctctaactatttaattggt---attagattgatcctctaactaaaaattgatttatttcgatcctctaaa--tttctcaccgttattatatttagtcatt 37585808  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    ||||||||||||||||||||||||||||| ||||| |||||||    
T  37585809 tctgttagttttattcaaataaacgttagagtttgtgttatgt 37585851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 402 - 567
Target Start/End: Original strand, 20306007 - 20306166
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| | ||||||  ||||| |||||    
T  20306007 aattacctttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggttctctaa--gtttcccaccg 20306099  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||| |||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| ||||    
T  20306100 ttattacatttagtcatttctgttggttttattcaaataaacgttaggatttgtgttatgtgagtcc 20306166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 394 - 567
Target Start/End: Complemental strand, 23476794 - 23476627
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtt 492  Q
    |||||||||||||| ||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||    
T  23476794 aaaggctaaattacatttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtt 23476702  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||  |||||| ||||||||| ||||||||||||||||||||||||||||||  ||||| |||||||| ||||    
T  23476701 tctcattgttacttcatttagtcttttctgttagttttattcaaataaacgttaatgtttgtgttatgtgagtcc 23476627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 423 - 565
Target Start/End: Original strand, 27547693 - 27547831
Alignment:
Q  423 taactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttct 521  Q
    |||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||||||||||| ||||||||||| |||||    
T  27547693 taactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttaatacatttagtcctttct 27547787  T
Q  522 gttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||| |||||||||||||||||||||||||||| || ||||||||    
T  27547788 gttggttttattcaaataaacgttagggtttgtgtcatgtgggt 27547831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 396 - 565
Target Start/End: Complemental strand, 49644121 - 49643959
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||||||||| |||||| |||||||  ||||||||||||||| |||||   |||||||||||||||||| |||||||| |||| ||||||||  |||||    
T  49644121 aggctaaattatctttttggtcctct--aactatttaattggtatcaga---ttggtcctctaattaaaaattgatttaattcggtcctctaa--gtttc 49644029  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
       || ||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||    
T  49644028 catccattactacatttagtcctttctgttagttttattcaaataaacgtta-ggtttgtgttatgtgggt 49643959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 385 - 565
Target Start/End: Original strand, 1762662 - 1762836
Alignment:
Q  385 ttattataaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcct 483  Q
    ||||| ||||| |||| |||||| ||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||    
T  1762662 ttattttaaaatggcttaattacttttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcct 1762756  T
Q  484 ctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||  ||||||||| ||||| ||||||| |||||| |||||||||||||||||||||| ||||||||||  ||||||||||    
T  1762757 ctaa--gtttctcactgttacaacatttaatcatttatgttagttttattcaaataaacattagggtttgtattatgtgggt 1762836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 420 - 565
Target Start/End: Original strand, 23476362 - 23476503
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    |||||||||||||||||||   |  ||||||||||||||| | ||||||||||||||||| ||| ||  |||||||||||||||||||||||||||| ||    
T  23476362 ctctaactatttaattggt---attagattggtcctctaactaaaaattgatttatttcggtccact--aagtttctcaccgttactacatttagtcctt 23476456  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||||||||||  | || |||||||||||    
T  23476457 tctgttagttttattcaaataaacgttagaatctgtgttatgtgggt 23476503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 399 - 567
Target Start/End: Complemental strand, 35612530 - 35612368
Alignment:
Q  399 ctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctca 497  Q
    ||||||||||||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||  ||||||||  |||| |||    
T  35612530 ctaaattacctttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcagtcctctaa--gtttatca 35612438  T
Q  498 ccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    | ||||||||||||| || |||||||||||||||||||||||||||||||||| || ||||||| |||||    
T  35612437 ctgttactacatttattcctttctgttagttttattcaaataaacgttagggtctgtgttatgttggtcc 35612368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 2064662 - 2064497
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||| |||||  ||||||  ||||||||||||||| || ||   ||| |||||||| ||||| ||||||||||||| | ||||||  |||||    
T  2064662 aggctaaattacatttttgatcctct--aactatttaattggtatcgga---ttgatcctctaactaaaaattgatttatttcggttctctaa--gtttc 2064570  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||    
T  2064569 tcactgttactacatttaatcatttctgttagttttattcaaataaatgttagagtttgtgttatgtgggtcc 2064497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 395 - 562
Target Start/End: Original strand, 12127055 - 12127216
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||||| |||||||||||| |||||||  ||||||||| ||||| || ||   ||||| |||||| ||||| ||||||||||||| ||||||||  ||||    
T  12127055 aaggcttaattacctttttggtcctct--aactatttagttggtatcgga---ttggttctctaactaaaaattgatttatttcggtcctctaa--gttt 12127147  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtg 562  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||| | |||| ||||||||    
T  12127148 ctcaccgtttctacatttagtcctttctgttagttttattcaaataaacgttatgatttgtgttatgtg 12127216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 396 - 562
Target Start/End: Complemental strand, 26723252 - 26723092
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||||||||||||||||  ||||||  ||||||||||||||| |||||   ||| || ||||| ||||| ||||||||||| | ||||||||  |||||    
T  26723252 aggctaaattacctttttgatcctct--aactatttaattggtatcaga---ttgatcatctaactaaaaattgatttattttggtcctctaa--gtttc 26723160  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtg 562  Q
    ||||||||| |||||||| || ||||||||||||||||||||||||||||||||||| | ||||||||    
T  26723159 tcaccgttattacatttaatcctttctgttagttttattcaaataaacgttagggttcgtgttatgtg 26723092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 37576181 - 37576345
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||||||||| ||||| |  ||||||| ||||||| || ||   || ||||||||| ||||| ||||||||||||| |||||||||  ||| |    
T  37576181 ggctaaattacctttttggtccttt--aactattaaattggtatcgga---ttagtcctctaactaaaaattgatttatttcggtcctctaaa--tttat 37576273  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||  ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37576274 caaagttactaaatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 37576345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 401 - 566
Target Start/End: Complemental strand, 4330283 - 4330124
Alignment:
Q  401 aaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcacc 499  Q
    |||||||||||||||||||||  || |||||||||||| || ||   ||   ||||||| ||||| ||||||||||||| ||||||||  |||||| ||     
T  4330283 aaattaccttttttgtcctct--aattatttaattggtatcgga---ttaaccctctaactaaaaattgatttatttcggtcctctaa--gtttcttact 4330191  T
Q  500 gttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtc 566  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  4330190 gttactacatttagtcctttctcttagttttattcaaataaacgttagggtttgtgttatgtgggtc 4330124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 396 - 565
Target Start/End: Original strand, 8760271 - 8760434
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||||||||| |||||||  ||||||||||||||| || ||   |||  ||||||| ||||| ||||||||||||||||||||||  ||||     
T  8760271 aggcttaattacctttttggtcctct--aactatttaattggtatcgga---ttgaccctctaactaaaaattgatttatttcgatcctctaa--gtttt 8760363  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||  |||||||||||||||||||| |||||| ||||||||||||||| |||||||||| |||||||||||    
T  8760364 tcagtgttactacatttagtcatttatgttagctttattcaaataaacattagggtttgtgttatgtgggt 8760434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 392 - 565
Target Start/End: Complemental strand, 20306457 - 20306290
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaa-attgatttatttcgatcctctaaaag 490  Q
    ||||||||| |||||||| ||| |||||||  ||||| ||||||||| |||||   ||| ||||| || |||| |||||||||||| | |||| |||  |    
T  20306457 aaaaaggcttaattacctctttggtcctct--aactagttaattggtatcaga---ttgatcctccaactaaagattgatttattttggtcctttaa--g 20306365  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  20306364 tttctcactgttactacatttagtcctttctattagttttattcaaataaacgttagggtttgtgttatgtgggt 20306290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 402 - 559
Target Start/End: Original strand, 38000494 - 38000645
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| || ||   |||||| ||||||||||| ||||||||||||| ||||||||  ||||||||  |    
T  38000494 aattacctttttggtcctct--aactatttaattggtatcgga---ttggtcttctaattaaaaattgatttatttcggtcctctaa--gtttctcattg 38000586  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttat 559  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||| ||||| |||||    
T  38000587 ttactacatttagtcctttctattagttttattcaaataaacgttagagtttgtgttat 38000645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 395 - 567
Target Start/End: Complemental strand, 8762851 - 8762685
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    ||||||||||||| ||||| ||| |||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||    
T  8762851 aaggctaaattacatttttggtcatct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gttt 8762759  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||| || |||||||||||||| |||||||||| ||||||||||||||||||| |  ||| |||||||||||||    
T  8762758 ctcatcggtactacatttagtcctttctgttagctttattcaaataaacgttaagagttgtgttatgtgggtcc 8762685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 420 - 565
Target Start/End: Original strand, 9006212 - 9006353
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| ||    ||||| |||| ||| | ||||||||||||||||| || |||  |||||| ||||||||| ||||||||||| ||    
T  9006212 ctctaactatttaattggtatc---ggattgatcctttaactaaaaattgatttatttcggtcatct--aagtttatcaccgttagtacatttagtcctt 9006306  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  9006307 tctgttagttttattcaaataaacgttagggtttgtgttatgtgggt 9006353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 402 - 562
Target Start/End: Original strand, 35612087 - 35612241
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  || |||||||||||| || ||   ||| |||||||| ||||| ||||||||||| | ||||||||  ||||||||| |    
T  35612087 aattacctttttggtcctct--aagtatttaattggtatcgga---ttgatcctctaactaaaaattgatttattttgttcctctaa--gtttctcactg 35612179  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtg 562  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||    
T  35612180 ttactacatttagtcctttcttttagttttattcaaataaacgttagggtttgtgttatgtg 35612241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 392 - 567
Target Start/End: Complemental strand, 37586148 - 37585979
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    ||||||| ||||||| |||||||||| |||  ||||| ||||||||| || ||   ||| |||||||||||||| || |||||||||| || |||||  |    
T  37586148 aaaaaggttaaattatcttttttgtcatct--aactacttaattggtatcgga---ttgatcctctaattaaaaattaatttatttcggtcttctaa--g 37586056  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||   ||||||||||||    
T  37586055 tttttcaccgttactacatttagtcatttatgttagttttattcaaataaacgttagagtttatattatgtgggtcc 37585979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 446 - 567
Target Start/End: Complemental strand, 9006596 - 9006477
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||| ||||||| ||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  9006596 gattggtcctctaactaaaaattgatttatttggatcctccaa--gtttctcacc-ttactacatttagtcctttctgttagttttattcaaataaacgt 9006500  T
Q  545 tagggtttgagttatgtgggtcc 567  Q
    ||| |||||  ||||||||||||    
T  9006499 tagagtttgtattatgtgggtcc 9006477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 393 - 567
Target Start/End: Original strand, 38127705 - 38127873
Alignment:
Q  393 aaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagt 491  Q
    |||| ||| |||||||||||| ||  |||||||||||||||||||| || ||   |||||| ||||| ||||| ||||||||||||| ||||||||  ||    
T  38127705 aaaatgcttaattacctttttggt--tctctaactatttaattggtttcgga---ttggtcatctaactaaaaattgatttatttcggtcctctaa--gt 38127797  T
Q  492 ttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    || |||| ||||||| |||||||| || ||||||||||||||||||||||||||| ||||||  ||||||||||||    
T  38127798 ttttcactgttactatatttagtccttgctgttagttttattcaaataaacgttatggtttgttttatgtgggtcc 38127873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 424 - 552
Target Start/End: Original strand, 45052715 - 45052839
Alignment:
Q  424 aactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctg 522  Q
    ||||||||||||||| |||||   ||| |||||||| ||||| ||||||||||||| |||| |||  ||||||||| ||||||||||||| |||||||||    
T  45052715 aactatttaattggtatcaga---ttgatcctctaactaaaaattgatttatttcggtcctataa--gtttctcactgttactacatttaatcatttctg 45052809  T
Q  523 ttagttttattcaaataaacgttagggttt 552  Q
    |||||||||||||||||||||||| |||||    
T  45052810 ttagttttattcaaataaacgttaaggttt 45052839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 37285177 - 37285014
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||| ||||| ||||| |  |||||||||||||||   |  ||||||||||||||| | ||||||||||||||||||| |||||||  |||||    
T  37285177 ggctaaattacatttttggtccttt--aactatttaattggt---attagattggtcctctaactaaaaattgatttatttcgattctctaaa--tttct 37285085  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||  |||||||||||||||  || ||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  37285084 cacaattactacatttagtc-cttatgttagttttatttaaataaatgttagggtttgtgttatgtgggtcc 37285014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 396 - 542
Target Start/End: Original strand, 23598071 - 23598213
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||||||||| |||||| |||||||  ||||||||||||||| || |||  |||||||||||| ||||| ||||||||||||  |||||||||  ||||    
T  23598071 aggctaaattatctttttggtcctct--aactatttaattggtatc-gaa--ttggtcctctaactaaaaattgatttatttcagtcctctaaa--tttc 23598163  T
Q  495 tcaccgttactacatttagtcatttctgttagttt--tattcaaataaac 542  Q
    ||||||||||||||||||||||||| |||||||||  |||||||||||||    
T  23598164 tcaccgttactacatttagtcatttttgttagttttatattcaaataaac 23598213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 419 - 565
Target Start/End: Original strand, 39486222 - 39486364
Alignment:
Q  419 tctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcat 517  Q
    |||||||||||||||||||| |  ||   |||||||||||| ||||| ||||||||||||| || | |||  |||||||||  ||||| ||||| ||| |    
T  39486222 tctctaactatttaattggtattgga---ttggtcctctaactaaaaattgatttatttcggtcgtttaa--gtttctcacatttactgcatttggtctt 39486316  T
Q  518 ttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  39486317 ttctgttagttctattcaaataaacgttagagtttgtgttatgtgggt 39486364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 446 - 565
Target Start/End: Complemental strand, 31704019 - 31703901
Alignment:
Q  446 gattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| | ||||||||||||||| |  |  ||| ||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||    
T  31704019 gattggtcctctaactaaaaattgatttattttggac--ctataagtttctcactgttactacatttagtcctttctgttaattttattcaaataaacgt 31703922  T
Q  545 tagggtttgagttatgtgggt 565  Q
    |||| |||  ||||| |||||    
T  31703921 taggctttatgttatatgggt 31703901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 446 - 561
Target Start/End: Original strand, 37284772 - 37284886
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    ||||||| |||||| ||||| ||||||||||||| || | |||  |||||||||||||||||||||||||| ||| ||||||||||||||||||||  ||    
T  37284772 gattggttctctaactaaaaattgatttatttcggtcatttaa--gtttctcaccgttactacatttagtcttttttgttagttttattcaaataagagt 37284869  T
Q  545 tagggtttgagttatgt 561  Q
    || |||||| |||||||    
T  37284870 tatggtttgtgttatgt 37284886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 488 - 567
Target Start/End: Complemental strand, 39486557 - 39486479
Alignment:
Q  488 aagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||| | ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||| ||||| |||||||    
T  39486557 aagttttttaccgttactacatttagtcctttcagttagttttattcaaa-aaacgttagggtttgtgttatatgggtcc 39486479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 507 - 565
Target Start/End: Complemental strand, 25996130 - 25996072
Alignment:
Q  507 catttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25996130 catttaatcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggt 25996072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 394 - 553
Target Start/End: Original strand, 10831128 - 10831280
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtt 492  Q
    |||||||||||||||||||| |||  ||||||||||||||||||| || ||  ||||||||||||| | ||||||||||||||||| |  ||   |||||    
T  10831128 aaaggctaaattacctttttggtc--ctctaactatttaattggtatc-ga--attggtcctctaactaaaaattgatttatttcggt--tccttaagtt 10831220  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    | ||||||||||||||||||||| |||  ||||  |||| | ||| |||||||||||||||    
T  10831221 tttcaccgttactacatttagtccttttcgttaaatttaattaaa-aaacgttagggtttg 10831280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 396 - 525
Target Start/End: Complemental strand, 46593681 - 46593559
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||| ||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||    |||||||    
T  46593681 aggctaaattacttttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctt---aagtttc 46593590  T
Q  495 tcaccgttactacatttagtcatttctgtta 525  Q
    |||| ||||||| ||||||||||||| ||||    
T  46593589 tcactgttactatatttagtcatttccgtta 46593559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 419 - 525
Target Start/End: Complemental strand, 34967152 - 34967050
Alignment:
Q  419 tctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcat 517  Q
    |||||||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| |||  |||  ||||||||||||||||| ||||||||||    
T  34967152 tctctaactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtccattaa--gtttctcaccgttactatatttagtcat 34967058  T
Q  518 ttctgtta 525  Q
    ||| ||||    
T  34967057 ttccgtta 34967050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 448 - 525
Target Start/End: Original strand, 49837417 - 49837493
Alignment:
Q  448 ttggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgtta 525  Q
    |||||||||||| ||||| ||||||||||||| |||  |||  ||||||||||||||||||||||||||||||| ||||    
T  49837417 ttggtcctctaactaaaaattgatttatttcggtcccttaa--gtttctcaccgttactacatttagtcatttccgtta 49837493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 398 - 551
Target Start/End: Original strand, 46592813 - 46592959
Alignment:
Q  398 gctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaat-tgatttatttcgatcctctaaaagtttctc 496  Q
    |||||||||||||||| | |||||  ||||||||||||| | |||||   ||| |||||||| |||||  ||||||||||||||||  |||  |||||||    
T  46592813 gctaaattacctttttggccctct--aactatttaattgatatcaga---ttgatcctctaactaaaaaatgatttatttcgatcccttaa--gtttctc 46592905  T
Q  497 accgttactacatttagtcatttctgttagttttattcaaataaacgttagggtt 551  Q
    || |||||| |||||||||||||| ||||  |||| | ||| |||||||||||||    
T  46592906 actgttactgcatttagtcatttccgttaaatttaattaaa-aaacgttagggtt 46592959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 487
Target Start/End: Complemental strand, 13109277 - 13109191
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaa 487  Q
    ||||||||||||||||| |||||||  ||||||||||||||| || ||   || ||||||||| ||||| ||||||||||||| ||||||||    
T  13109277 ggctaaattacctttttagtcctct--aactatttaattggtatccga---ttagtcctctaactaaaaattgatttatttcggtcctctaa 13109191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 525
Target Start/End: Complemental strand, 5537210 - 5537132
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgtta 525  Q
    |||||||||||||| ||||| ||||||||||||| |||  ||| |  ||||||| ||||||||||||||||||||| ||||    
T  5537210 gattggtcctctaactaaaaattgatttatttcggtcccttaaga--ttctcactgttactacatttagtcatttccgtta 5537132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 525
Target Start/End: Original strand, 34966306 - 34966425
Alignment:
Q  400 taaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcac 498  Q
    |||||||||||||| | |||||  ||||||||||||||| ||    |||||||||||||| ||||| ||||||||||||  |||  |  |||||||||||    
T  34966306 taaattacctttttggacctct--aactatttaattggtatc---ggattggtcctctaactaaaacttgatttatttcagtccctt--aagtttctcac 34966398  T
Q  499 cgttactacatttagtcatttctgtta 525  Q
     |||||| ||||||||| ||| |||||    
T  34966399 tgttactgcatttagtcttttatgtta 34966425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 525
Target Start/End: Original strand, 5536397 - 5536520
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||| ||||| | |||||  ||||||||||||||| ||    |||||||||||||  ||||| ||||||||||| | | ||||  |||||||    
T  5536397 aggctaaattacatttttggccctct--aactatttaattggtatc---ggattggtcctctacctaaaatttgatttatttgggt-ctct-taagtttc 5536489  T
Q  495 tcaccgttactacatttagtcatttctgtta 525  Q
    ||| ||||||||||||||||| |||| ||||    
T  5536490 tcatcgttactacatttagtcctttccgtta 5536520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 426 - 487
Target Start/End: Complemental strand, 4697222 - 4697163
Alignment:
Q  426 ctatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaa 487  Q
    ||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||    
T  4697222 ctatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa 4697163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 1e-48; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 390 - 567
Target Start/End: Complemental strand, 27473528 - 27473357
Alignment:
Q  390 ataaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaa 488  Q
    |||| ||||||||||||||||||| |||||||  ||| ||||||||||| |||||   || ||||||||| ||||| ||||||||||||| ||||||||     
T  27473528 ataataaggctaaattacctttttggtcctct--aacaatttaattggtatcaga---ttagtcctctaactaaaaattgatttatttcggtcctctaa- 27473435  T
Q  489 agtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  27473434 -gtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgtaggtcc 27473357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 392 - 567
Target Start/End: Original strand, 1432126 - 1432295
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    ||||||| |||||||| ||||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||  |    
T  1432126 aaaaaggataaattacttttttggtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--g 1432218  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  1432219 tttctcaccgttactacatttaatcatttctgttagttttattcaaataaacgttagggtttgtgttatttgggtcc 1432295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 392 - 565
Target Start/End: Original strand, 33819780 - 33819947
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    |||||||||||||||||||||| |||||||  || |||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |    
T  33819780 aaaaaggctaaattacctttttggtcctct--aattatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--g 33819872  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||    
T  33819873 tttctcaccgttactacatttagtcatttctattagttttattcaaataaacgttagagtttgtgttatgtgggt 33819947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 394 - 567
Target Start/End: Original strand, 38588585 - 38588751
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtt 492  Q
    ||||||||||||||| |||| |||  |||||||||||||||||||   |  ||||||||||||||| | ||||||||||||||||| ||||||  |||||    
T  38588585 aaaggctaaattacc-ttttcgtc--ctctaactatttaattggt---attagattggtcctctaactaaaaattgatttatttcggtcctct--aagtt 38588676  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  38588677 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagagtttgtgttatgtgggtcc 38588751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 33296135 - 33295970
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||||||||| |||||||  ||||||||||||||| |||||   || ||||||||| ||||| || |||||||||| ||||||||  |||||    
T  33296135 aggctaaattacctttttggtcctct--aactatttaattggtatcaga---ttagtcctctaactaaaaattaatttatttcggtcctctaa--gtttc 33296043  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  33296042 tcaccgttactacatttagtcttttctgttagttttattcaaataaacgttagggtttgtgttatgtgagtcc 33295970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 395 - 567
Target Start/End: Original strand, 7949410 - 7949576
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||| ||||||| |||||| |||||||  ||||||||||||||| |||||   |||||| | ||||||||| ||||||||||||| ||||||||  ||||    
T  7949410 aaggttaaattatctttttggtcctct--aactatttaattggtatcaga---ttggtcttttaattaaaaattgatttatttcggtcctctaa--gttt 7949502  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  7949503 ctcaccgttactacatttagtcctttctgttagttttattcaaataaacgttagagtttgtgttatgtgggtcc 7949576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 15048399 - 15048563
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||||||||| |||||||  ||||||||||||||| || ||   || ||||||||| ||||| ||||||||||||| ||||||||  ||||||    
T  15048399 ggctaaattacctttttggtcctct--aactatttaattggtatcgga---ttagtcctctaactaaaaattgatttatttcggtcctctaa--gtttct 15048491  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  15048492 gaccgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttttgttatgtgggtcc 15048563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 403 - 565
Target Start/End: Original strand, 37569320 - 37569476
Alignment:
Q  403 attaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgt 501  Q
    ||||||||||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||||||||    
T  37569320 attacctttttggtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgt 37569412  T
Q  502 tactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||  |||||||||||    
T  37569413 tactacatttagtcatttctgttagttttattcgaataaacgttatggtttttgttatgtgggt 37569476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 392 - 564
Target Start/End: Complemental strand, 1870390 - 1870224
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    ||||||||| |||||| ||||| |||||||  ||||||||||||||| |   ||||| | |||||||| ||||| ||||||||||||| ||||||||  |    
T  1870390 aaaaaggcttaattacatttttggtcctct--aactatttaattggtat---aagatagatcctctaactaaaaattgatttatttcggtcctctaa--g 1870298  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtggg 564  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1870297 tttctcaaagttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgtggg 1870224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 395 - 567
Target Start/End: Complemental strand, 45277048 - 45276882
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||||||||||| |||||| |||||||  ||||||||||||||| || ||   || ||||||||| ||||| || |||||||||| ||||||||  ||||    
T  45277048 aaggctaaattatctttttggtcctct--aactatttaattggtatcgga---ttagtcctctaactaaaaatttatttatttcggtcctctaa--gttt 45276956  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  45276955 ctcaccgttactacatttagtcttttctgttagttttattcaaataaacgttagggattgtgttatgtgggtcc 45276882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 45077654 - 45077489
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||||||||| |||||||  |||||||| ||| || |||||   |||||||||||| ||||| ||||||||||| | ||||||||  |||||    
T  45077654 aggctaaattacctttttggtcctct--aactatttgattagtatcaga---ttggtcctctaactaaaaattgatttattttggtcctctaa--gtttc 45077562  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||    
T  45077561 tcactgttactacatttagtcatttctattagttttattcaaataaacgttagagtttgtgttatgtgggtcc 45077489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 392 - 562
Target Start/End: Complemental strand, 15048854 - 15048690
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    |||||| || |||||||||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |    
T  15048854 aaaaagacttaattacctttttggtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--g 15048762  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtg 562  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||    
T  15048761 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttatgatttgtgttatgtg 15048690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 15872071 - 15871907
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||| ||||| |||||||  |||||||||||| || |||||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||    
T  15872071 ggctaaattacatttttggtcctct--aactatttaatttgtatcaga---ttggtcctctaaataaaaattgatttatttcggtcctctaa--gtttct 15871979  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||| |||||||||||||||| ||| ||||||||||||||||||||||||||| | ||| |||||||||||||    
T  15871978 cactgttactacatttagtcttttttgttagttttattcaaataaacgttagagcttgtgttatgtgggtcc 15871907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 396 - 565
Target Start/End: Original strand, 1646500 - 1646663
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||||||||| |||||||  ||||||||||||||| |||||   ||||| |||||| ||||| ||||||||||||| ||||||||  |||||    
T  1646500 aggcttaattacctttttggtcctct--aactatttaattggtatcaga---ttggttctctaactaaaaattgatttatttcggtcctctaa--gtttc 1646592  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||| | |||||| | |||||||||    
T  1646593 tcactgttactatatttagtcatttctgttagttttattcaaataaacgtcaaggtttgtgctatgtgggt 1646663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 402 - 567
Target Start/End: Complemental strand, 1652016 - 1651858
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||||||||    
T  1652016 aattacctttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccg 1651924  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||| ||| ||||||||||||||||||||| |||||| |||| |||||||||||||    
T  1651923 ttactacatttagtcctttttgttagttttattcaaataaa-gttaggttttgtgttatgtgggtcc 1651858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 402 - 567
Target Start/End: Complemental strand, 1740392 - 1740234
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||||||||    
T  1740392 aattacctttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccg 1740300  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||| ||| ||||||||||||||||||||| |||||| |||| |||||||||||||    
T  1740299 ttactacatttagtcctttttgttagttttattcaaataaa-gttaggttttgtgttatgtgggtcc 1740234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 397 - 553
Target Start/End: Original strand, 1869934 - 1870083
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||||||||| |||||||  ||||||||||||||| |||||   ||| |||||||| ||||| || |||||||||| | ||||||  ||||||    
T  1869934 ggctaaattaccttttt-gtcctct--aactatttaattggtatcaga---ttgatcctctaactaaaaattaatttatttcggttctctaa--gtttct 1870025  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1870026 caccgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttg 1870083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 420 - 565
Target Start/End: Original strand, 11707771 - 11707912
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||| ||||| |||||   |||||||||||| ||||| ||||||| ||||||||||||||  ||||||||| |||| ||||||||||||||    
T  11707771 ctctaactatttagttggtatcaga---ttggtcctctaactaaaaattgatttgtttcgatcctctaa--gtttctcactgttaatacatttagtcatt 11707865  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  11707866 tctcttagttttattcaaataaatgttagggtttgtgttatgtgggt 11707912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 397 - 565
Target Start/End: Complemental strand, 34470994 - 34470832
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  ||||||||| ||||| |||||   |||||||||||| ||||| ||||||||||| | ||||||||  |||| |    
T  34470994 ggcttaattacctttttggtcctct--aactatttagttggtatcaga---ttggtcctctaactaaaaattgatttattttggtcctctaa--gttttt 34470902  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||    
T  34470901 caccgttgctacatttagtcctttctgttagttttattcaaataaacgttaaggtttgtgttatgtgggt 34470832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 402 - 565
Target Start/End: Original strand, 5434905 - 5435062
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaatt-gatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| || ||   ||| |||||||  ||||||| ||||||||||| |  |||||  |||||||||||    
T  5434905 aattacctttttggtcctct--aactatttaattggtatcgga---ttgatcctctacctaaaatttgatttatttcggttttctaa--gtttctcaccg 5434997  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5434998 ttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggt 5435062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 392 - 567
Target Start/End: Complemental strand, 7535288 - 7535119
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    ||||||||||||||| |||||| |||||||  ||||||||||||||| |||||   || ||||||||| ||||| ||||||||||||| ||||||||  |    
T  7535288 aaaaaggctaaattatctttttggtcctct--aactatttaattggtatcaga---ttagtcctctaactaaaaattgatttatttcggtcctctaa--g 7535196  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||| |||||||||||||| || ||| ||||||||||||||||||||||||||  ||||| |||||||| ||||    
T  7535195 tttctcatcgttactacatttaatcctttatgttagttttattcaaataaacgttatagtttgtgttatgtgagtcc 7535119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 400 - 567
Target Start/End: Complemental strand, 11174081 - 11173920
Alignment:
Q  400 taaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcac 498  Q
    |||||||||||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||||||    
T  11174081 taaattacctttttggtcctct--aactatttaattggtatctga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcac 11173989  T
Q  499 cgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||||   ||||||||||||    
T  11173988 cgttactacatttagtcttttatgttagttttattcaaataaatgttagagtttagattatgtgggtcc 11173920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 446 - 563
Target Start/End: Complemental strand, 44595007 - 44594891
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||| ||||||||| ||||| ||||||||||||| ||||||||  |||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  44595007 gattagtcctctaactaaaaattgatttatttcggtcctctaa--gtttctaaccgttactacatttagtcatttcggttagttttattcaaataaacgt 44594910  T
Q  545 tagggtttgagttatgtgg 563  Q
    ||||||||| |||||||||    
T  44594909 tagggtttgtgttatgtgg 44594891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 397 - 566
Target Start/End: Complemental strand, 5435350 - 5435187
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||||||||| |||||| |||||||  |||||| |||||||| || ||   ||||| |||||| ||||| ||||||||||||| |||| |||  ||||||    
T  5435350 ggctaaattatctttttggtcctct--aactatataattggtatcgga---ttggtgctctaactaaaaattgatttatttcggtcctttaa--gtttct 5435258  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtc 566  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  5435257 caccgttactacatttagtcacttttgttagttttattcaaataaacgttagagtttgtgttatgtgggtc 5435187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 15871665 - 15871783
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| || |||||||| | |||||||||  |||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  15871665 gattggtcctctaactaaaaattaatttattttggtcctctaaa--tttctcactgttactacatttagtcatttatgttagttttattcaaataaacgt 15871762  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| |||||||||||    
T  15871763 tagggtttgtgttatgtgggt 15871783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 45276641 - 45276759
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||  |||||||| ||||||||||||||||||||| | ||||||||||||||||||| ||    
T  45276641 gattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcatcgttactacatttagtcatttatattagttttattcaaataaatgt 45276738  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| |||||||||||    
T  45276739 tagggtttgtgttatgtgggt 45276759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 423 - 567
Target Start/End: Original strand, 27669440 - 27669580
Alignment:
Q  423 taactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttct 521  Q
    |||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| |||||||||  |||||||| |||| ||||||||||| |||||    
T  27669440 taactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaaa--tttctcactgttagtacatttagtcctttct 27669534  T
Q  522 gttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||    
T  27669535 gttagttttattgaaataaacgttagggtttatgttatgtgggtcc 27669580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 462 - 565
Target Start/End: Complemental strand, 40048443 - 40048342
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    ||||||| ||||||| ||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  40048443 aaaattgttttattttgatcctctaa--gtttctcaccgttactacatttagtcttttctgttagttttattcaaataaacgttaaggtttgtgttatgt 40048346  T
Q  562 gggt 565  Q
    ||||    
T  40048345 gggt 40048342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 446 - 567
Target Start/End: Complemental strand, 5152940 - 5152820
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||  |||||||||||||| ||||||||||  ||||||||||||||||||||||||||||    
T  5152940 gattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttattacatttagttttttctgttagttttattcaaataaacgt 5152843  T
Q  545 tagggtttgagttatgtgggtcc 567  Q
    ||| ||||| ||||| |||||||    
T  5152842 tagagtttgtgttatatgggtcc 5152820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 420 - 565
Target Start/End: Complemental strand, 27669849 - 27669709
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| |||||   |||||| ||||| ||||| |||||||||||||||| |    ||||||| ||| |||||||||||||||||||    
T  27669849 ctctaactatttaattggtatcaga---ttggtcttctaactaaaaattgatttatttcgatcttt---aagtttcacactgttactacatttagtcatt 27669756  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||| | |||||||||| |||||||||||    
T  27669755 tctgttagttttattcaaataatcattagggtttgtgttatgtgggt 27669709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 420 - 565
Target Start/End: Original strand, 5152556 - 5152696
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    |||||||| |||||||||| |||||   |||||||||| | ||||| ||||||||||| | ||||||||  ||||||||  |||||||||||||||| ||    
T  5152556 ctctaactgtttaattggtatcaga---ttggtcctctgactaaaaattgatttatttgg-tcctctaa--gtttctcattgttactacatttagtcctt 5152649  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  5152650 tctgttagttttattcaaataaacgttagggtttgtgttatgtgggt 5152696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 1646957 - 1646793
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||||||||| |||||||  ||||||||||||||| || ||   |||||| ||||| ||||| ||||||||||||| ||||||||  |||||    
T  1646957 aggcttaattacctttttcgtcctct--aactatttaattggtatcgga---ttggtcatctaactaaaaattgatttatttcggtcctctaa--gtttc 1646865  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||| |||||||||||||||| ||| ||||||||||||||||||||| |||||| |||  |||||||||||||    
T  1646864 tcactgttactacatttagtcctttttgttagttttattcaaataaa-gttaggttttatgttatgtgggtcc 1646793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 447 - 553
Target Start/End: Complemental strand, 40660291 - 40660186
Alignment:
Q  447 attggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgtt 545  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||  ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  40660291 attggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttactatatttagtcttttctgttagttttattcaaataaacgtt 40660194  T
Q  546 agggtttg 553  Q
    || |||||    
T  40660193 agagtttg 40660186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 445 - 565
Target Start/End: Original strand, 27473115 - 27473233
Alignment:
Q  445 agattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacg 543  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||||  ||||||||| ||||||||||||| |||||||||||||||||||||||||||||     
T  27473115 agattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcac-gttactacatttaatcatttctgttagttttattcaaataaaca 27473211  T
Q  544 ttagggtttgagttatgtgggt 565  Q
    ||| | |||| |||||||||||    
T  27473212 ttatgatttgtgttatgtgggt 27473233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 419 - 565
Target Start/End: Complemental strand, 38589017 - 38588875
Alignment:
Q  419 tctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcat 517  Q
    |||||||||||||||||||| |  ||   ||| |||||||| ||||| ||||||||||||| ||||||||  ||||||||||||||||| |||||||| |    
T  38589017 tctctaactatttaattggtattgga---ttgatcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttactagatttagtcct 38588923  T
Q  518 ttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    || ||||| |||||||||||||||||||||||||||  ||||||||||    
T  38588922 ttatgttaattttattcaaataaacgttagggtttgtattatgtgggt 38588875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 397 - 563
Target Start/End: Original strand, 40659983 - 40660143
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||| ||||| |||||||  ||||||||||||||| || ||  ||| ||| ||||| | ||||||||||||||||  ||||||  ||||||||    
T  40659983 ggctaaattacttttttggtcctct--aactatttaattggtatc-ga--attagtcatctaactaaaaattgatttatttcagtcctct--aagtttct 40660075  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    ||| |||||||||||||||| |||||  |||||||||||||||||||||||||||||| |||||||||    
T  40660076 cactgttactacatttagtcttttctaatagttttattcaaataaacgttagggtttgtgttatgtgg 40660143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 396 - 553
Target Start/End: Complemental strand, 22763384 - 22763233
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||||||||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| |||  |||  |||||    
T  22763384 aggctaaattacctttttggtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcccttaa--gtttc 22763292  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    ||||||||||||||||||||| |||| ||||  |||| | ||| |||||||||||||||    
T  22763291 tcaccgttactacatttagtcttttccgttaaatttaattaaaaaaacgttagggtttg 22763233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 402 - 565
Target Start/End: Original strand, 1739953 - 1740110
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||| ||| || ||   || ||||||||| ||||| ||||||||||||| ||||||||  ||||||||| |    
T  1739953 aattacctttttggtcctct--aactatttaatcggtatcgga---ttagtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcactg 1740045  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||| ||||||||||| |||||||||||||||||||||||||||| | | |||| | |||||||||    
T  1740046 ttattacatttagtcctttctgttagttttattcaaataaacgtcaagatttgtgctatgtgggt 1740110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 488 - 567
Target Start/End: Complemental strand, 18298594 - 18298515
Alignment:
Q  488 aagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  18298594 aagtttctcacaattactacatttagtcatttctgttagttttattcaaataaacgttagagtttgtgttatgtgagtcc 18298515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 500 - 561
Target Start/End: Original strand, 40048156 - 40048217
Alignment:
Q  500 gttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  40048156 gttactacatttagtcatttctgttagttttattcaaataaacgttaaagtttgtgttatgt 40048217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 445 - 565
Target Start/End: Original strand, 44594644 - 44594763
Alignment:
Q  445 agattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacg 543  Q
    ||||||||||| ||| ||||| ||||||||||||| |||| ||||  ||| |   |||||||||||||||| |||||||||||||||||||| ||||||     
T  44594644 agattggtcctttaactaaaaattgatttatttcggtcctttaaa--tttatattcgttactacatttagttatttctgttagttttattcatataaaca 44594741  T
Q  544 ttagggtttgagttatgtgggt 565  Q
    |||| ||||| | |||||||||    
T  44594742 ttagagtttgtgctatgtgggt 44594763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 33295757 - 33295862
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||| ||||| |||||   |||||| ||||||||||| ||||||||||||| |  |||||  |||| ||||||||| ||||||||||||||    
T  33295757 ctctaactatttagttggtatcaga---ttggtcttctaattaaaaattgatttatttcggtattctaa--gtttgtcaccgttattacatttagtcatt 33295851  T
Q  519 tctgttagttt 529  Q
    |||||||||||    
T  33295852 tctgttagttt 33295862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 510 - 565
Target Start/End: Original strand, 7534940 - 7534995
Alignment:
Q  510 ttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||| |||||||||||||||||||||||||||||||| |||| |||||||||||    
T  7534940 ttagtcctttctgttagttttattcaaataaacgttaggatttgtgttatgtgggt 7534995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 508 - 565
Target Start/End: Original strand, 45077307 - 45077364
Alignment:
Q  508 atttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||| |||||||||||    
T  45077307 atttagtcctttatgttagttttattcaaataaacgttatggtttgtgttatgtgggt 45077364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 446 - 552
Target Start/End: Complemental strand, 37569721 - 37569616
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    ||||| || ||||||||||| || |||||||| | |||||||||  ||||||   ||||||| |||||||| |||| |||||||||||||||||||||||    
T  37569721 gattgatcatctaattaaaaatttatttattttggtcctctaaa--tttctcgttgttactatatttagtcttttcagttagttttattcaaataaacgt 37569624  T
Q  545 tagggttt 552  Q
    ||| ||||    
T  37569623 tagagttt 37569616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 487
Target Start/End: Original strand, 45077221 - 45077307
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaa 487  Q
    |||| |||||||||||| |||||||  ||||||||||||||| |||||   ||| |||||||| ||||| ||||||||||||| ||||||||    
T  45077221 ggcttaattacctttttggtcctct--aactatttaattggtatcaga---ttgatcctctaactaaaaattgatttatttcggtcctctaa 45077307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 488
Target Start/End: Complemental strand, 11920223 - 11920135
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaa 488  Q
    |||||||||||||||||| ||| |||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||| | |||||||||    
T  11920223 aggctaaattacctttttggtcatct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttgggtcctctaaa 11920135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 5e-48; HSPs: 63)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 394 - 567
Target Start/End: Complemental strand, 21540431 - 21540263
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtt 492  Q
    ||||||||||||||||||||||  | || |||||||||||||||| |||||   || ||||||||||||||| ||||||||||||| ||||||||  |||    
T  21540431 aaaggctaaattaccttttttggtc-ctttaactatttaattggtatcaga---ttagtcctctaattaaaaattgatttatttcggtcctctaa--gtt 21540338  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21540337 tctcatcgttactacatttaatcatttctgttagttttattcaaataaacgttagggtttgcgttatgtgggtcc 21540263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 396 - 565
Target Start/End: Original strand, 6235920 - 6236083
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||||||||| |||||||  ||||||||||||||| |||||   || ||||| ||||||||| ||||||||||||| ||||||||  |||||    
T  6235920 aggctaaattacctttttggtcctct--aactatttaattggtatcaga---ttagtcctataattaaaaattgatttatttcggtcctctaa--gtttc 6236012  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6236013 tcaccgttactgcatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggt 6236083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 397 - 565
Target Start/End: Original strand, 35167490 - 35167652
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  ||||||||| ||||| || ||   ||| |||||||| ||||| ||||||||||||| ||||||||  ||||||    
T  35167490 ggcttaattacctttttggtcctct--aactatttagttggtatcgga---ttgatcctctaactaaaaattgatttatttcggtcctctaa--gtttct 35167582  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35167583 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgtgggt 35167652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 402 - 565
Target Start/End: Original strand, 5937818 - 5937975
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| |||||   ||| | |||||| ||||| ||||||||||||| ||||||||  ||||||||| |    
T  5937818 aattacctttttggtcctct--aactatttaattggtatcaga---ttgattctctaactaaaaattgatttatttcggtcctctaa--gtttctcactg 5937910  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5937911 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgtgggt 5937975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 396 - 563
Target Start/End: Original strand, 6137378 - 6137538
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaattgatttatttcgatcctctaaaagtttct 495  Q
    ||||| |||||||||||| |||||||  ||||||||||||||| || ||   |||||||||||||||||| |||||||||||| ||||||||  ||||||    
T  6137378 aggcttaattacctttttggtcctct--aactatttaattggtatcgga---ttggtcctctaattaaaaatgatttatttcggtcctctaa--gtttct 6137470  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||||| | |||||| |||||||||    
T  6137471 cactgttactacatttagtcttttctgttagttttattcaaataaacgtcaaggtttgtgttatgtgg 6137538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 6532192 - 6532356
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttct 495  Q
    |||| ||||||||||||||||  |||||||||||||||| || ||    ||||| |||||||| | ||||||||||||||||| | |||||||  |||||    
T  6532192 ggcttaattaccttttttgtc--ctctaactatttaatttgtatc---ggattgatcctctaactaaaaattgatttatttcggttctctaaa--tttct 6532284  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6532285 caccgttactacatttagtgatttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 6532356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 9046086 - 9046250
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||| ||||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||  |||| |    
T  9046086 ggctaaattacttttttggtcctct--aactatttaattggtatcaga---ttggtcctctaagtaaaaattgatttatttcggtcctctaa--gtttgt 9046178  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| |||||||||||||    
T  9046179 caccgttactacatttagtcttttctgttagttttattcaaataaatgttagagtttgtgttatgtgggtcc 9046250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 395 - 567
Target Start/End: Original strand, 26600355 - 26600521
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||||||||||| |||||| |||||||  ||||||| ||||||| || ||   || ||||||||| ||||| || |||||||||| ||||||||  ||||    
T  26600355 aaggctaaattatctttttggtcctct--aactattaaattggtatcgga---ttagtcctctaactaaaaattaatttatttcggtcctctaa--gttt 26600447  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26600448 atcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 26600521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 420 - 565
Target Start/End: Complemental strand, 34891073 - 34890932
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||||| |||||||||||||||| ||    
T  34891073 ctctaactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcactgttactacatttagtcttt 34890979  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||    
T  34890978 tctgttagttttattcaaataaacgttaggatttgtgttatgtgggt 34890932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 462 - 565
Target Start/End: Original strand, 978476 - 978577
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    ||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  978476 aaaattgatttatttcggtcctctaa--gtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgt 978573  T
Q  562 gggt 565  Q
    ||||    
T  978574 gggt 978577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 394 - 565
Target Start/End: Original strand, 3423167 - 3423332
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtt 492  Q
    ||||||| ||||||| |||| ||  |||||||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||    
T  3423167 aaaggcttaattaccattttggt--tctctaactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtt 3423259  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  3423260 tctcactgttactacatttagtcttttctattagttttattcaaataaacgttagggtttgtgttatgtgggt 3423332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 423 - 567
Target Start/End: Original strand, 18052980 - 18053120
Alignment:
Q  423 taactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttct 521  Q
    |||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||||| |||||||||||||||||||| |    
T  18052980 taactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcactgttactacatttagtcatttat 18053074  T
Q  522 gttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  18053075 gttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 18053120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 32753177 - 32753341
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||| ||||| |||||||  |||||||||||| || |||||   ||| |||||||| ||||| ||||||||||||| ||||||||  ||||||    
T  32753177 ggctaaattacatttttggtcctct--aactatttaattagtatcaga---ttgatcctctaactaaaaattgatttatttcggtcctctaa--gtttct 32753269  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||    
T  32753270 caccgttattacatttagtcatttctgttagttttattcaaataaatgttaaggtttgtgttatgtgggtcc 32753341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 34994830 - 34994666
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||||||||| ||| |||  |||||||||||||||   |  ||||||||||||||| | ||||||||||||||||||||||||  ||||||||    
T  34994830 ggctaaattacctttttagtcatct--aactatttaattggt---attagattggtcctctaactaaaaattgatttatttcgatcctct--aagtttct 34994738  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  34994737 cactgttactgcatttagtcttttatgttagttttattcaaataaacgttagggtttgtgttatgcgggtcc 34994666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 446 - 565
Target Start/End: Complemental strand, 26600753 - 26600635
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||| ||||| ||||| ||||||||||||| ||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26600753 gattggtcttctaactaaaaattgatttatttcggtcctctaa--gtttctcactgttactacatttagtcatttctgttagttttattcaaataaacgt 26600656  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| |||||||||||    
T  26600655 tagggtttgtgttatgtgggt 26600635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 394 - 565
Target Start/End: Complemental strand, 9046539 - 9046374
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtt 492  Q
    ||||||| |||||||||||| |||||||  ||||||||||||||| |  ||   |||||||||||| ||||| ||||||||||||| ||| ||||  |||    
T  9046539 aaaggcttaattacctttttggtcctct--aactatttaattggtattgga---ttggtcctctaactaaaaattgatttatttcggtccgctaa--gtt 9046447  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||    
T  9046446 tctcaccgctactacatttagtcctttctgttagttctattcaaataaacgttagggtttgtgttatgtgggt 9046374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 400 - 567
Target Start/End: Original strand, 24744332 - 24744492
Alignment:
Q  400 taaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcac 498  Q
    |||||||||||||| |||||||  ||||||||||||||| || ||   || ||||||||| ||||| ||||||||||||| ||||||||   |||| |||    
T  24744332 taaattaccttttt-gtcctct--aactatttaattggtatcgga---ttagtcctctaactaaaaattgatttatttcggtcctctaac--tttcacac 24744423  T
Q  499 cgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24744424 cgttactgcatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 24744492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 32993466 - 32993301
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||  ||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| |||| |||  |||||    
T  32993466 aggctaaattatatttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctataa--gtttc 32993374  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  32993373 tcaccgtttctacatttagtcctttctgttagttttattcaaataaacgttagggtttgtattatgtgggtcc 32993301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 396 - 567
Target Start/End: Original strand, 34890643 - 34890808
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||||||||||||||||  ||||||  ||||||||||||||| |  ||   |||||||||||| ||||| ||||||||||| | |||||  ||||||||    
T  34890643 aggctaaattacctttttgttcctct--aactatttaattggtattgga---ttggtcctctaactaaaaattgatttattttggtcctc--aaagtttc 34890735  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34890736 tcactgttattacatttagtcttttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 34890808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 392 - 565
Target Start/End: Complemental strand, 15933011 - 15932844
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    |||||| || |||||| ||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||| | ||||||||  |    
T  15933011 aaaaagacttaattacatttttggtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttattttggtcctctaa--g 15932919  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  15932918 tttctcaccgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatatgggt 15932844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 400 - 567
Target Start/End: Original strand, 2517005 - 2517166
Alignment:
Q  400 taaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcac 498  Q
    |||||||| ||||| |||||||  ||||||||||||||| || ||   || ||||||||| ||||| ||||||||||||| ||||||||  |||||| ||    
T  2517005 taaattacatttttggtcctct--aactatttaattggtatcgga---ttagtcctctaactaaaaattgatttatttcggtcctctaa--gtttctgac 2517097  T
Q  499 cgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
     |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  2517098 tgttactacatttagtcttttctgttagttttattcaaataaacgttagtgtttgtgttatgtgggtcc 2517166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 400 - 567
Target Start/End: Complemental strand, 5938260 - 5938099
Alignment:
Q  400 taaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcac 498  Q
    |||||||||||||| ||| |||  || |||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||||||    
T  5938260 taaattacctttttggtcatct--aattatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcac 5938168  T
Q  499 cgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
      ||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  5938167 aattactacatttagtcctttctgttagttttattcaaataaacgttaaggtttgtgttatgtgggtcc 5938099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 21857006 - 21856841
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||||||||| |||||||  || |||||| ||||| || ||   |||||||||||| ||||| ||||||||||| | ||||||||  |||||    
T  21857006 aggctaaattacctttttggtcctct--aagtatttagttggtatcgga---ttggtcctctaactaaaaattgatttattttggtcctctaa--gtttc 21856914  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||  ||||| |||||||    
T  21856913 tcaccgttactacatttagtcctttctgttagttttattcaaataaacgttatggtttttgttatatgggtcc 21856841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 397 - 565
Target Start/End: Complemental strand, 31238196 - 31238034
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||  ||||||||||||| ||||| ||    ||||||| |||||| | ||||||||||||||||| ||||||  |||||| |    
T  31238196 ggcttaattacctttttggtc--ctctaactatttagttggtatc---ggattggt-ctctaactaaaaattgatttatttcggtcctct-taagttttt 31238104  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  31238103 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagagtttgtgttatgtgggt 31238034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 402 - 565
Target Start/End: Complemental strand, 32753618 - 32753461
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| || ||   ||| |||||||| ||||| ||||||||||||| ||||||||  ||||||||| |    
T  32753618 aattacctttttggtcctct--aactatttaattggtatcgga---ttgatcctctaactaaaaattgatttatttcggtcctctaa--gtttctcactg 32753526  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||    
T  32753525 ttactacatttagtcctttctgttagttttattcaaataaacgtcagagtttgtgttatgtgggt 32753461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 393 - 567
Target Start/End: Original strand, 31237742 - 31237910
Alignment:
Q  393 aaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagt 491  Q
    |||||| |||||||| ||||| |||||||  ||||||||||||||| ||    |||| || |||||| | ||||||||||||||||| || |||  ||||    
T  31237742 aaaaggttaaattacttttttggtcctct--aactatttaattggtatc---ggattagttctctaactaaaaattgatttatttcggtcttct--aagt 31237834  T
Q  492 ttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||  ||||||||||||    
T  31237835 ttctcaccgttactacatttagtcatttctgttagttttattcaaataaatgttagagtttgttttatgtgggtcc 31237910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 404 - 565
Target Start/End: Complemental strand, 5311269 - 5311114
Alignment:
Q  404 ttaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgtt 502  Q
    |||||||||| |||||||  ||||||||| ||||| |||||   |||||||||||| ||||| ||||||||||||| | ||||||  |||||||| ||||    
T  5311269 ttacctttttggtcctct--aactatttagttggtatcaga---ttggtcctctaactaaaaattgatttatttcggtgctctaa--gtttctcatcgtt 5311177  T
Q  503 actacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||| ||||| |||||||||||    
T  5311176 actacatttagtcctttatgttagttttattcaaataaacgttagagtttgtgttatgtgggt 5311114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 404 - 553
Target Start/End: Complemental strand, 18053396 - 18053253
Alignment:
Q  404 ttaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgtt 502  Q
    |||||||||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| | ||||||  |||||||||||||    
T  18053396 ttacctttttggtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtactctaa--gtttctcaccgtt 18053304  T
Q  503 actacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| |||||    
T  18053303 actacatttagtcctttctattagttttattcaaataaacgttagagtttg 18053253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 396 - 565
Target Start/End: Original strand, 21856554 - 21856717
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||| ||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||| | ||||||||  |||||    
T  21856554 aggcttaattacatttttggtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttattttggtcctctaa--gtttc 21856646  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  21856647 tcaccgttactacatttagtcctttctgttagttttattcaaataaacgttagagtttgtgttatatgggt 21856717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 34994424 - 34994542
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||  ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  34994424 gattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttactatatttagtcctttctgttagttttattcaaataaacgt 34994521  T
Q  545 tagggtttgagttatgtgggt 565  Q
    |||  |||| |||||||||||    
T  34994522 tagaatttgtgttatgtgggt 34994542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 5310826 - 5310990
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||||||||| |||||| |||||||  ||||||||||||| | |||||  |   ||||| ||| ||||| ||||||||||||| || |||||  ||||||    
T  5310826 ggctaaattatctttttggtcctct--aactatttaattgatatcagagta---gtcctataactaaaaattgatttatttcggtcatctaa--gtttct 5310918  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  5310919 cactgttactacatttagtcctttctgttagttttattcaaataaatgttagggtttgtgttatgtgggtcc 5310990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 396 - 567
Target Start/End: Original strand, 7269950 - 7270117
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||| |||||  ||||||  ||||||||||||||| |  ||   |||||||||||| ||||| ||||||||||||| | ||||||  |||||    
T  7269950 aggctaaattacttttttaatcctct--aactatttaattggtattgga---ttggtcctctaactaaaaattgatttatttcggttctctaa--gtttc 7270042  T
Q  495 tcaccgttactacatttagtcatttctgttag--ttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||||| ||||||||||| |||||||||||||    
T  7270043 tcaccgttactacatttagtcatttctgttagttttttatttaaataaatgttagggtttgtgttatgtgggtcc 7270117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 446 - 567
Target Start/End: Original strand, 7270673 - 7270793
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||||||||| ||||||||||| |||| | |||  |||||| |||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  7270673 gattggtcctctaattaaaaattgatttattttgatcttttaa--gtttcttaccgttactatatttagtcttttttgttagttttattcaaataaacgt 7270770  T
Q  545 tagggtttgagttatgtgggtcc 567  Q
    ||||||||| |||||||||||||    
T  7270771 tagggtttgtgttatgtgggtcc 7270793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 446 - 559
Target Start/End: Original strand, 25176707 - 25176819
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||  | ||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25176707 gattggtcctctaactaaaaattgatttattatggtcctctaa--gtttctcaccgttactacatttagtcctttctgttagttttattcaaataaacgt 25176804  T
Q  545 tagggtttgagttat 559  Q
    ||||||||| |||||    
T  25176805 tagggtttgtgttat 25176819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 402 - 567
Target Start/End: Complemental strand, 6137822 - 6137664
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| || ||   |||||||| ||| ||||| ||||||||||||| ||||||||  |||||||||||    
T  6137822 aattacctttttggtcctct--aactatttaattggtatcgga---ttggtcctttaactaaaaattgatttatttcggtcctctaa--gtttctcaccg 6137730  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||| ||| ||||||||||||||||||||| |||||  |||| |||||||||||||    
T  6137729 ttactacatttagtcctttttgttagttttattcaaataaa-gttagattttgtgttatgtgggtcc 6137664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 448 - 567
Target Start/End: Complemental strand, 3423574 - 3423456
Alignment:
Q  448 ttggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgtta 546  Q
    ||||||| |||||||||| ||| ||||||||| ||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3423574 ttggtccgctaattaaaaattggtttatttcggtcctctaat--tttctcaccgttactacatttagtcttttctgttagttttattcaaataaacgtta 3423477  T
Q  547 gggtttgagttatgtgggtcc 567  Q
    | ||||| | |||||||||||    
T  3423476 gagtttgtgatatgtgggtcc 3423456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 488 - 564
Target Start/End: Complemental strand, 25177022 - 25176946
Alignment:
Q  488 aagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtggg 564  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25177022 aagtttctcaccgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtggg 25176946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 421 - 553
Target Start/End: Complemental strand, 26957389 - 26957261
Alignment:
Q  421 tctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcattt 519  Q
    ||||||||||||||||||   |  ||||||||||| ||| | ||||||||||||||||| |||| |  |||||| ||||||||||||||||||||| |||    
T  26957389 tctaactatttaattggt---attagattggtcctttaactaaaaattgatttatttcggtccttt--aagtttttcaccgttactacatttagtccttt 26957295  T
Q  520 ctgttagttttattcaaataaacgttagggtttg 553  Q
    ||||||||||||||||||||||||||||||||||    
T  26957294 ctgttagttttattcaaataaacgttagggtttg 26957261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 397 - 546
Target Start/End: Complemental strand, 2517452 - 2517309
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||    
T  2517452 ggcttaattacctttttggtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttct 2517360  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgtta 546  Q
    ||||||||||||||||| || ||||||||||||||||| ||||||||||||    
T  2517359 caccgttactacatttaatcctttctgttagttttatttaaataaacgtta 2517309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 446 - 562
Target Start/End: Complemental strand, 6236327 - 6236212
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||  |||||| || ||||||| ||||| || ||||||||||||||||||||||||||||    
T  6236327 gattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctaacagttactaaatttaatcctttctgttagttttattcaaataaacgt 6236230  T
Q  545 tagggtttgagttatgtg 562  Q
    ||||||||| ||||||||    
T  6236229 tagggtttgtgttatgtg 6236212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 462 - 558
Target Start/End: Complemental strand, 10412890 - 10412796
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagtta 558  Q
    ||||||||||||||||| ||||||||  ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  10412890 aaaattgatttatttcggtcctctaa--gtttctcaccgttactatatttagtcatttctattaattttattcaaataaacgttagggtttgtgtta 10412796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 421 - 565
Target Start/End: Complemental strand, 5639601 - 5639461
Alignment:
Q  421 tctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcattt 519  Q
    |||||||||||||||||| || ||   || ||||||||| ||||| || |||||||||| ||||||||  |||||| ||||||||||||||||||| |||    
T  5639601 tctaactatttaattggtatcgga---ttagtcctctaactaaaaatttatttatttcggtcctctaa--gtttcttaccgttactacatttagtccttt 5639507  T
Q  520 ctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
     |||||||||||||||||||||| ||| |||||| |||||||||||    
T  5639506 ttgttagttttattcaaataaacattatggtttgtgttatgtgggt 5639461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 447 - 565
Target Start/End: Complemental strand, 24744726 - 24744609
Alignment:
Q  447 attggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgtt 545  Q
    ||||||||||||| ||||| |||||||||||| || || |||  ||||||||| |||| ||||||||||| ||||| |||||||||||||||||||||||    
T  24744726 attggtcctctaactaaaaattgatttatttccattctttaa--gtttctcactgttattacatttagtcttttctattagttttattcaaataaacgtt 24744629  T
Q  546 agggtttgagttatgtgggt 565  Q
    |||||||| |||||||||||    
T  24744628 agggtttgtgttatgtgggt 24744609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 397 - 565
Target Start/End: Complemental strand, 31247566 - 31247404
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| || |||||||||  |||||| || |||| |    
T  31247566 ggcttaattacctttttggtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattaatttatttcagtcctcttaa-gttttt 31247473  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  31247472 caccgttactacatt-agtcatttctgttagttttattcaaataaacgttaaagtttgtgttatgtgggt 31247404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 396 - 562
Target Start/End: Complemental strand, 7271080 - 7270920
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||| ||||||| |||||||  ||||||||||||||| |||||   || ||||||||| ||||| ||||||||||||  ||||||||  |||||    
T  7271080 aggcttaattgcctttttggtcctct--aactatttaattggtatcaga---ttagtcctctaactaaaaattgatttatttcagtcctctaa--gtttc 7270988  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtg 562  Q
    ||| |||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||| ||||||||    
T  7270987 tcatcgttactatatttagtcctttctattagttttatttaaataaacgttggggtttgtgttatgtg 7270920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 393 - 567
Target Start/End: Original strand, 31247112 - 31247280
Alignment:
Q  393 aaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagt 491  Q
    |||||| |||||||| ||||| |||||||  ||||||||||||||| ||    |||| || |||||| | ||||||||||||||||| |  |||  ||||    
T  31247112 aaaaggttaaattacttttttggtcctct--aactatttaattggtatc---ggattagttctctaactaaaaattgatttatttcggtgttct--aagt 31247204  T
Q  492 ttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||  ||||||| ||||    
T  31247205 ttctcaccgttactacatttaatcttttctgttagttttattcaaataaacgttagagtttgttttatgtgagtcc 31247280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 420 - 561
Target Start/End: Original strand, 32993036 - 32993173
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    |||||||||||||||||||   |  ||||||||| ||||| | ||||||||||||||| | ||||||  ||||||||||  |||||||||||| ||| ||    
T  32993036 ctctaactatttaattggt---attagattggtcatctaagtaaaaattgatttattttggtcctct--aagtttctcattgttactacatttggtcctt 32993130  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  32993131 tctgttagttttattcaaataaacgttaggatttgtgttatgt 32993173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 462 - 567
Target Start/End: Original strand, 26957023 - 26957126
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    ||||||||||||||||| ||||||||  |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||  ||||  ||||||     
T  26957023 aaaattgatttatttcggtcctctaa--gtttcttaccgttactacatttagtcctttatgttagttttattcaaataaacgttaaagtttatgttatgg 26957120  T
Q  562 gggtcc 567  Q
    ||||||    
T  26957121 gggtcc 26957126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 397 - 553
Target Start/End: Complemental strand, 34518142 - 34517992
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||||||||| |||||||  ||||||||||||||| || ||   ||||||||| || ||||| |||||||||||||||||  |||  ||||||    
T  34518142 ggctaaattacctttttggtcctct--aactatttaattggtatcgga---ttggtcctcaaactaaaaattgatttatttcgatcccttaa--gtttct 34518050  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    || ||||||||||||||||| |||| ||||  |||| | ||| |||||||||||||||    
T  34518049 catcgttactacatttagtcctttccgttaaatttaattaaaaaaacgttagggtttg 34517992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 462 - 547
Target Start/End: Original strand, 3035941 - 3036025
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcattt-ctgttagttttattcaaataaacgttag 547  Q
    ||||||||||||||||| ||||||||  |||||||||  ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  3035941 aaaattgatttatttcggtcctctaa--gtttctcactcttactacatttagtcattttctgttaattttattcaaataaacgttag 3036025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 491 - 565
Target Start/End: Complemental strand, 7270315 - 7270241
Alignment:
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| | |||||||||    
T  7270315 tttctcatcgttactacatttagtcttttctgttaattttattcaaataaacgttagagtttgtggtatgtgggt 7270241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 394 - 514
Target Start/End: Original strand, 7438801 - 7438915
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtt 492  Q
    ||||||||||||| |||||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| |||  |||  |||    
T  7438801 aaaggctaaattatctttttggtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcccttaa--gtt 7438893  T
Q  493 tctcaccgttactacatttagt 514  Q
    ||||||||||||||||||||||    
T  7438894 tctcaccgttactacatttagt 7438915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 402 - 538
Target Start/End: Original strand, 14276404 - 14276534
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  | ||||||||||||| || ||   ||| |||||||| ||||| |||||||| |||| |||||||||  ||||||||||    
T  14276404 aattacctttttggtcctct--acctatttaattggtatcgga---ttgatcctctaactaaaaattgatttacttcggtcctctaaa--tttctcaccg 14276496  T
Q  501 ttactacatttagtcatttctgttagttttattcaaat 538  Q
    ||||||||||||||| ||| | ||||||||||||||||    
T  14276497 ttactacatttagtcctttgtattagttttattcaaat 14276534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 553
Target Start/End: Original strand, 17244664 - 17244814
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  ||||||||||||||| || |    |||||||||||| ||||| ||||||||||| | ||||||||  |||| |    
T  17244664 ggcttaattacctttttggtcctct--aactatttaattggtatcggt---ttggtcctctaactaaaaattgatttattttggtcctctaa--gtttat 17244756  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    |||||||| || |||| ||||||||||||||||||| |  || |||||||||||||||    
T  17244757 caccgttattatatttcgtcatttctgttagttttaatagaagaaacgttagggtttg 17244814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 394 - 551
Target Start/End: Original strand, 15286342 - 15286492
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtt 492  Q
    ||||| ||||||||||||||  ||||||  |||||||||||||||||| ||   |||||||||| | ||||| |||||||||||| ||||  |||  |||    
T  15286342 aaaggttaaattacctttttgatcctct--aactatttaattggtgtcgga---ttggtcctctgactaaaaattgatttatttcaatcccttaa--gtt 15286434  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtt 551  Q
    ||||||||||||| |||||||||||||| ||||  |||| | ||| |||||||||||||    
T  15286435 tctcaccgttactgcatttagtcatttccgttaaatttaattaaa-aaacgttagggtt 15286492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 508 - 567
Target Start/End: Complemental strand, 35167837 - 35167778
Alignment:
Q  508 atttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||| || |||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  35167837 atttaatcctttctgttagttttattcaagtaaacgttagggtttgtgttatgtgggtcc 35167778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 390 - 478
Target Start/End: Original strand, 34517265 - 34517349
Alignment:
Q  390 ataaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcg 478  Q
    |||||||||||||||||| ||||| |||  ||||||||||||||||||||||    |||||||||||||| | |||||||||||||||||    
T  34517265 ataaaaaggctaaattacttttttggtc--ctctaactatttaattggtgtc---ggattggtcctctaactaaaaattgatttatttcg 34517349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 394 - 503
Target Start/End: Original strand, 15932727 - 15932830
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtt 492  Q
    |||||||||||||||||||| |||  ||||||||||||| ||||| ||    |||||||||||||| | ||||||||||||||| ||||||||  |||||    
T  15932727 aaaggctaaattacctttttggtc--ctctaactatttagttggtatc---ggattggtcctctaactaaaaattgatttattttgatcctct--aagtt 15932819  T
Q  493 tctcaccgtta 503  Q
    ||||| |||||    
T  15932820 tctcatcgtta 15932830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 392 - 525
Target Start/End: Complemental strand, 29261406 - 29261279
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaag 490  Q
    |||||||||||||||  ||||| |||||||  |||||||||||||||   |  ||||||||||||||| | ||||||||||||| ||| |||  |  |||    
T  29261406 aaaaaggctaaattatatttttagtcctct--aactatttaattggt---attagattggtcctctaactaaaaattgatttatgtcggtccctt--aag 29261314  T
Q  491 tttctcaccgttactacatttagtcatttctgtta 525  Q
    |||||||| |||||||||||||||| |||| ||||    
T  29261313 tttctcactgttactacatttagtcctttccgtta 29261279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 553
Target Start/End: Original strand, 6228730 - 6228879
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  || |||||||||||| || |    |||||||||||| ||||| ||||||||||| | ||| ||||  |||| |    
T  6228730 ggcttaattacctttttagtcctct--aattatttaattggtatcggt---ttggtcctctaactaaaaattgatttattttggtcc-ctaa--gtttat 6228821  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    ||||||||||| |||| |||||||||||| |||||| |  || ||| |||||||||||    
T  6228822 caccgttactatatttcgtcatttctgtttgttttaatagaagaaatgttagggtttg 6228879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 525
Target Start/End: Original strand, 29260532 - 29260652
Alignment:
Q  398 gctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctc 496  Q
    |||||||||||||| | |||||||  ||||||||||||||| ||   |||||||||||| || | |||||| |||||||||| |||  |  |||||||||    
T  29260532 gctaaattacctttctggtcctct--aactatttaattggtatc---agattggtcctcaaactaaaaattaatttatttcggtccctt--aagtttctc 29260624  T
Q  497 accgttactacatttagtcatttctgtta 525  Q
    | | |||||||||||||||||||| ||||    
T  29260625 a-cattactacatttagtcatttccgtta 29260652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 478
Target Start/End: Complemental strand, 25180303 - 25180221
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcg 478  Q
    |||||||||||||||||||| | |||  ||||||||||||| ||||| ||    |||||||||||||| | |||||||||||||||||    
T  25180303 aaaaaggctaaattacctttctggtc--ctctaactatttagttggtatc---ggattggtcctctaactaaaaattgatttatttcg 25180221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 524 - 565
Target Start/End: Original strand, 5639294 - 5639335
Alignment:
Q  524 tagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||| ||||| ||||| |||||||||||    
T  5639294 tagttttattcaaataaatgttagagtttgtgttatgtgggt 5639335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 2e-47; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 396 - 567
Target Start/End: Original strand, 9989322 - 9989487
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||| ||||| ||| |||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||    
T  9989322 aggctaaattacttttttggtcatct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttc 9989414  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9989415 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 9989487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 394 - 565
Target Start/End: Complemental strand, 27186326 - 27186161
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtt 492  Q
    |||||||||||||| ||||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||  ||||||||  |||    
T  27186326 aaaggctaaattacatttttggtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcagtcctctaa--gtt 27186234  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  27186233 tctcactgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatatgggt 27186161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 397 - 562
Target Start/End: Original strand, 16860303 - 16860462
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||||||||| |||||| |||||||  ||||||||||| ||| |||||   |||||||||||| ||||| ||||||||||||| |||| |||  ||||||    
T  16860303 ggctaaattatctttttggtcctct--aactatttaatcggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctttaa--gtttct 16860395  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtg 562  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  16860396 caccgttactacatttagtcttttctgttagttttattcaaataaacgttagagtttgtgttatgtg 16860462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 397 - 565
Target Start/End: Original strand, 38958724 - 38958886
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||    
T  38958724 ggcttaattacctttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttct 38958816  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||| | |||||||||    
T  38958817 cactgttactacatttagtcatttctgttagttttattcaaataaacgtcaaggtttgtgctatgtgggt 38958886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 396 - 565
Target Start/End: Original strand, 36440199 - 36440362
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| ||||||||||||  ||||||  ||||||||| ||||| |||||   ||| |||||||| ||||| ||||||||||||| ||||||||  |||||    
T  36440199 aggcttaattacctttttgatcctct--aactatttagttggtatcaga---ttgatcctctaactaaaaattgatttatttcggtcctctaa--gtttc 36440291  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  36440292 tcactgttattacatttagtcatttctgttagttttattcaaataaacgttagagtttgtgttatgtgggt 36440362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 423 - 567
Target Start/End: Original strand, 11315982 - 11316122
Alignment:
Q  423 taactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttct 521  Q
    |||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||||||||||||  |||||| ||  |||||||||||||||||||||    
T  11315982 taactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcgatcctctaa--gtttcttactattactacatttagtcatttct 11316076  T
Q  522 gttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||| |||||||||||||||||| ||||||| |||||    
T  11316077 gttagttttattccaataaacgttagggtttgtgttatgtaggtcc 11316122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 393 - 567
Target Start/End: Original strand, 2182939 - 2183107
Alignment:
Q  393 aaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagt 491  Q
    ||||||||||||||  ||||| |||||||  ||||||||||||||| ||    |||||||||||||| | |||||||||||||||   || |||  ||||    
T  2182939 aaaaggctaaattaattttttggtcctct--aactatttaattggtatc---ggattggtcctctaactaaaaattgatttatttatgtcgtct--aagt 2183031  T
Q  492 ttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| |||||||||||||    
T  2183032 ttctcaccgttactacatttagtcctttatgttagctttattcaaataaacgttagggtttgtgttatgtgggtcc 2183107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 446 - 567
Target Start/End: Complemental strand, 37424671 - 37424551
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||| ||||||||| ||||| ||||||||||| | ||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37424671 gattagtcctctaactaaaaattgatttattttggtcctctaa--gtttctcaccgttactacatttagtcctttctgttagttttattcaaataaacgt 37424574  T
Q  545 tagggtttgagttatgtgggtcc 567  Q
    ||| ||||| |||||||||||||    
T  37424573 tagagtttgtgttatgtgggtcc 37424551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 402 - 564
Target Start/End: Original strand, 39325417 - 39325573
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||   |||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||||| |    
T  39325417 aattacctttttggtcctctg--actatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcactg 39325509  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtggg 564  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  39325510 ttactacatttaatcctttctgttagttttattcaaataaacgttagggtttctgttatgtggg 39325573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 423 - 565
Target Start/End: Original strand, 24040109 - 24040247
Alignment:
Q  423 taactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttct 521  Q
    |||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||| ||||  |||||||||||||||||||||||||| |||||    
T  24040109 taactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtccactaa--gtttctcaccgttactacatttagtcctttct 24040203  T
Q  522 gttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
     ||||||||||||||||||||||||| ||||| |||||||||||    
T  24040204 attagttttattcaaataaacgttagagtttgtgttatgtgggt 24040247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 397 - 566
Target Start/End: Complemental strand, 24040537 - 24040374
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||| ||||| |||  |||||||||||||||| || ||    ||||| |||||||| | |||||||| |||||||  |||| |  ||||||||    
T  24040537 ggctaaattacttttttggtc--ctctaactatttaattagtatc---ggattgatcctctaactaaaaattgacttatttcagtccttt--aagtttct 24040445  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtc 566  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24040444 caccgttcctacatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtc 24040374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 446 - 562
Target Start/End: Original strand, 35569819 - 35569934
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||  ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||    
T  35569819 gattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcactgttactacatttaatcttttctgttagttttattcaaataaacgt 35569916  T
Q  545 tagggtttgagttatgtg 562  Q
    ||||||||| ||||||||    
T  35569917 tagggtttgtgttatgtg 35569934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 420 - 565
Target Start/End: Original strand, 37424283 - 37424424
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||| ||||| |||||   |||||||||||| ||||| ||||||||||||| || |||||  ||||||||| |||||||||||||||| ||    
T  37424283 ctctaactatttatttggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcttctaa--gtttctcactgttactacatttagtcctt 37424377  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  37424378 tctgttagttttattcaaataaacgttagagtttgtgttatttgggt 37424424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 462 - 565
Target Start/End: Complemental strand, 9989712 - 9989611
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    ||||||||||||||||| ||||||||  ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||    
T  9989712 aaaattgatttatttcggtcctctaa--gtttctcactgttactacatttagtcctttctgttagttttattcaaataaacgttagagtttgtgttatgt 9989615  T
Q  562 gggt 565  Q
    ||||    
T  9989614 gggt 9989611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 402 - 565
Target Start/End: Complemental strand, 25183098 - 25182941
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  | ||||||  |    
T  25183098 aattacctttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gcttctcaatg 25183006  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    || ||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25183005 ttgctatatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggt 25182941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 451 - 560
Target Start/End: Original strand, 29199001 - 29199109
Alignment:
Q  451 gtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttaggg 549  Q
    ||||||||||||||| ||||||||||||||| || |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  29199001 gtcctctaattaaaaattgatttatttcgattctttaa--gtttctcaccgttactacatttagtcatttctgttagttttattcaaataaagtttaggg 29199098  T
Q  550 tttgagttatg 560  Q
    |||| ||||||    
T  29199099 tttgtgttatg 29199109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 397 - 563
Target Start/End: Complemental strand, 39325805 - 39325645
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||| ||||| |||||||  || |||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||    
T  39325805 ggctaaattacatttttagtcctct--aattatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttct 39325713  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    ||  |||| ||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||    
T  39325712 cattgttattacatttagtactttctgttagttttattcaaataaacgttagggtttgtgttatgtgg 39325645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 402 - 563
Target Start/End: Original strand, 32288083 - 32288237
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  |||||||||||||||   |  ||||||||| ||||| | ||||||||||||||||| || |||  ||||||||||| |    
T  32288083 aattacctttttggtcctct--aactatttaattggt---attagattggtcatctaactaaaaattgatttatttcggtcatct--aagtttctcactg 32288175  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||    
T  32288176 ttactacatttagtcatttctattagttttattcaaataaacgtta-ggtttgtgttatgtgg 32288237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 36440651 - 36440486
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||||||||| |||||| |||||||  ||||||||||||||| || ||   || ||||||||| ||||| ||||||||||||| ||||||||  |||||    
T  36440651 aggctaaattatctttttggtcctct--aactatttaattggtatcgga---ttagtcctctaactaaaaattgatttatttcggtcctctaa--gtttc 36440559  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||  | |||| |||||||| ||||||||||||||||||||||||||||| ||||||| ||||| |||||||    
T  36440558 tcactataactatatttagtcctttctgttagttttattcaaataaacgttggggtttgtgttatatgggtcc 36440486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 446 - 563
Target Start/End: Complemental strand, 11316360 - 11316244
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||  ||||||||| |||||||||||||||| ||||| ||| |||||||| |||||||||    
T  11316360 gattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcactgttactacatttagtcctttctattaattttattcgaataaacgt 11316263  T
Q  545 tagggtttgagttatgtgg 563  Q
    ||||||||| |||||||||    
T  11316262 tagggtttgtgttatgtgg 11316244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 488 - 567
Target Start/End: Complemental strand, 35570145 - 35570066
Alignment:
Q  488 aagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  35570145 aagtttctcaccgttactacatttagtcacttctgttagttttattcaaataaacgttagggtttgtgttatgtgagtcc 35570066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 38959173 - 38959010
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||    
T  38959173 ggcttaattacctttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttct 38959081  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||| |||||  |||| |||||||| ||||    
T  38959080 caccgttactacatttagtcctttttgttaattttattcaaataaa-gttagattttgtgttatgtgagtcc 38959010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 395 - 567
Target Start/End: Complemental strand, 25567440 - 25567274
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagttt 493  Q
    ||||||||||||| ||||| |||  || |||||||||||||||| ||    ||||||| || ||| | ||||||||||||||| |||||| |  ||||||    
T  25567440 aaggctaaattacttttttagtc--ctttaactatttaattggtatc---ggattggttctttaactaaaaattgatttattttgatccttt--aagttt 25567348  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
     ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||  |||||||| ||||    
T  25567347 ttcaccgttactacatttagtcttttctgttagttttattcaaataaacgttagagtttttgttatgtgagtcc 25567274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 400 - 567
Target Start/End: Complemental strand, 32288523 - 32288363
Alignment:
Q  400 taaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctcac 498  Q
    ||||||||||||||  ||||||  ||||||||||||| |   |  ||||||||||||||| | ||||||||||||||||| ||||||  |||||| ||||    
T  32288523 taaattacctttttgatcctct--aactatttaattgat---attagattggtcctctaactaaaaattgatttatttcggtcctct--aagtttatcac 32288431  T
Q  499 cgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
     |||| |||||||||||||||||||||||||||||||||| || ||||| ||||| |||||||||||||    
T  32288430 tgttaatacatttagtcatttctgttagttttattcaaat-aatgttagagtttgtgttatgtgggtcc 32288363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 420 - 567
Target Start/End: Original strand, 27185895 - 27186037
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| |||||   |||||| ||||| ||||| ||||||||||| | ||||||||  |||||||||  ||||||||||||||| ||    
T  27185895 ctctaactatttaattggtatcaga---ttggtcttctaactaaaaattgatttattttggtcctctaa--gtttctcacttttactacatttagtcctt 27185989  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
     |||| ||||||||||||||||| |||||||||||  ||||||||||||    
T  27185990 cctgt-agttttattcaaataaatgttagggtttgttttatgtgggtcc 27186037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 420 - 565
Target Start/End: Complemental strand, 2183372 - 2183231
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| ||    ||||| |||| ||| | ||||||||||||||||| |  |||  |||||||||||||||||||||||||||| ||    
T  2183372 ctctaactatttaattggtatc---ggattgatcctttaactaaaaattgatttatttcggt--tctgtaagtttctcaccgttactacatttagtcctt 2183278  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||| |||||||||||||||||||| ||| ||||||  ||||||||||    
T  2183277 tctattagttttattcaaataaacattaaggtttgtcttatgtgggt 2183231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 471 - 567
Target Start/End: Complemental strand, 34264728 - 34264634
Alignment:
Q  471 ttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||| ||||||||  ||||||||  |||| |||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||    
T  34264728 ttatttcggtcctctaa--gtttctcattgttattacatttagtcatttctgttggttttattcaaataaacgttagagtttgtgttatgtgggtcc 34264634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 446 - 549
Target Start/End: Complemental strand, 1140171 - 1140077
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||  |||||||||||||||||||||||        ||||||||||||||||||||||||    
T  1140171 gattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttactacattta--------tgttagttttattcaaataaacgt 1140082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 446 - 520
Target Start/End: Original strand, 34264406 - 34264479
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttc 520  Q
    |||||| ||||||| ||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  34264406 gattggccctctaactaaaaattgatttatttcgatcctctaa--gtttctcaccgttactacatttagtcctttc 34264479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 402 - 553
Target Start/End: Original strand, 19184602 - 19184747
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| || |    |||||||||||| ||||| ||||||||||| | |||| |||  |||| ||||||    
T  19184602 aattacctttttggtcctct--aactatttaattggtatcggt---ttggtcctctaactaaaaattgatttattttggtcctttaa--gtttatcaccg 19184694  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    |||||| |||| ||| ||||||||||||||| |  || || ||||||||||||    
T  19184695 ttactatatttcgtcctttctgttagttttaatagaagaaccgttagggtttg 19184747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 34264477 - 34264510
Alignment:
Q  532 ttcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||| |||||||||||    
T  34264477 ttcaaataaacgttagggtttgtgttatgtgggt 34264510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 8e-47; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 10506398 - 10506234
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||||||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||    
T  10506398 ggctaaattacctttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttct 10506306  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10506305 cactgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 10506234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 395 - 565
Target Start/End: Original strand, 39664182 - 39664346
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaat-tgatttatttcgatcctctaaaagttt 493  Q
    |||||| |||||||||||| |||||||  ||||||||||||||| || ||   |||||||||||| |||||  |||||||||||| ||||||||  ||||    
T  39664182 aaggcttaattacctttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaaatgatttatttcggtcctctaa--gttt 39664274  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39664275 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgtgggt 39664346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 395 - 567
Target Start/End: Complemental strand, 5900875 - 5900709
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    ||||||||||||| ||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||    
T  5900875 aaggctaaattacatttttggtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gttt 5900783  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5900782 ctcaccgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 5900709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 393 - 565
Target Start/End: Complemental strand, 27801943 - 27801777
Alignment:
Q  393 aaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaat-tgatttatttcgatcctctaaaagt 491  Q
    |||||||| |||||||||||| |||||||  ||||||||||||||| || |||  ||||||||||||||||||  |||||||||||| ||||||||  ||    
T  27801943 aaaaggcttaattacctttttggtcctct--aactatttaattggtatc-gaa--ttggtcctctaattaaaaaatgatttatttcggtcctctaa--gt 27801851  T
Q  492 ttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27801850 ttctcactgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggt 27801777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 393 - 559
Target Start/End: Original strand, 29818173 - 29818333
Alignment:
Q  393 aaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagt 491  Q
    |||||| |||||||||||||| |||||||  ||||||||||||||| |||||   || ||||||||| ||||| ||||||||||||||||||||||  ||    
T  29818173 aaaaggttaaattacctttttggtcctct--aactatttaattggtatcaga---ttagtcctctaaataaaaattgatttatttcgatcctctaa--gt 29818265  T
Q  492 ttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttat 559  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  29818266 ttctcactgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttat 29818333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 44893740 - 44893904
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||||||||| |||||| ||  |||||||||||||||||||| || ||   |||||| ||||| ||||| ||||||||||||| ||||||||  ||||||    
T  44893740 ggctaaattatctttttggt--tctctaactatttaattggtatcgga---ttggtcttctaactaaaaattgatttatttcggtcctctaa--gtttct 44893832  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  44893833 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagagtttgtgttatgtgggtcc 44893904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 54108352 - 54108188
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||||||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||    
T  54108352 ggctaaattacctttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttct 54108260  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  54108259 cagtgttattacatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 54108188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 394 - 567
Target Start/End: Complemental strand, 4757946 - 4757779
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtt 492  Q
    ||||||| |||||| ||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||    
T  4757946 aaaggcttaattacatttttggtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtt 4757854  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4757853 tctcaccgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 4757779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 393 - 565
Target Start/End: Original strand, 54107898 - 54108064
Alignment:
Q  393 aaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagt 491  Q
    ||||||||  ||||||||||| ||| |||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||    
T  54107898 aaaaggctttattacctttttggtcatct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gt 54107990  T
Q  492 ttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  54107991 ttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagagtttgtgttatgtgggt 54108064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 392 - 567
Target Start/End: Original strand, 47669254 - 47669423
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    ||||| |||||||||||||||| |||||||  ||||||||||||||| || ||   || ||||||||| ||||| || |||||||||| ||||||||  |    
T  47669254 aaaaatgctaaattacctttttggtcctct--aactatttaattggtatcgga---ttagtcctctaactaaaaattaatttatttcggtcctctaa--g 47669346  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  47669347 tttctcaccgttactacatttagtcctttctgttagttttattcaaataaacgttaaggtttgtgttatgtgggtcc 47669423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 420 - 563
Target Start/End: Original strand, 21568767 - 21568906
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| || ||   ||| |||||||||||||| ||||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  21568767 ctctaactatttaattggtatcgga---ttgatcctctaattaaaaattgatttatttcggtcctctaa--gtttctcaccgttactacatttagtcatt 21568861  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||    
T  21568862 tctgttagttttattcaaataaatgttagggtttgtgttatgtgg 21568906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 403 - 565
Target Start/End: Complemental strand, 21569189 - 21569033
Alignment:
Q  403 attaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgt 501  Q
    ||||||||||| |||||||  ||||||||||||||| || ||   || ||||||||| ||||| ||||||||||||||||||||||  ||||||||||||    
T  21569189 attacctttttggtcctct--aactatttaattggtatcgga---ttagtcctctaactaaaaattgatttatttcgatcctctaa--gtttctcaccgt 21569097  T
Q  502 tactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  21569096 tactacatttagtcttttctgttagttttattcaaataaatgttagggtttgtgttatgtgggt 21569033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 398 - 567
Target Start/End: Original strand, 39241359 - 39241522
Alignment:
Q  398 gctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctc 496  Q
    |||||||||| ||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||||    
T  39241359 gctaaattacatttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctc 39241451  T
Q  497 accgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  39241452 actgttactacatttagtcatttctgttagttttattcaaataaacgttaatgtttgtgttatgtgggtcc 39241522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 397 - 553
Target Start/End: Complemental strand, 12791626 - 12791476
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||||||||| |||||| |||||||  ||||||||||||||| || ||   |||||||||||||||||| ||||||||||||| |||||||||  |||||    
T  12791626 ggctaaattatctttttggtcctct--aactatttaattggtatcgga---ttggtcctctaattaaaaattgatttatttcggtcctctaaa--tttct 12791534  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  12791533 caccgttactacatttagtcttttctgttagttttattcaaataaacgttagagtttg 12791476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 397 - 565
Target Start/End: Complemental strand, 24429017 - 24428855
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| ||| |||  ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| || |||||  ||||||    
T  24429017 ggcttaattacctttttggtcatct--aactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcttctaa--gtttct 24428925  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  24428924 caccgttactacatttagtcttttatgttagttttattcaaataaacgttagggtttgtgttatgtgggt 24428855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 396 - 564
Target Start/End: Original strand, 53716294 - 53716455
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||| |||||||||||||  ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||    
T  53716294 aggctaaattac-ttttttgtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttc 53716385  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtggg 564  Q
    |||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||| |||| |||||    
T  53716386 tcaccgttactatatttggtcctttctgttagttttattcaaataaacgttagggtttgtgttacgtggg 53716455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 396 - 563
Target Start/End: Original strand, 24428566 - 24428727
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||||||||| |||||| |||||||  ||||||| ||||||| |||||   |||||||||||| ||||| ||||||||||||||||||||||  |||||    
T  24428566 aggctaaattatctttttggtcctct--aactattcaattggtatcaga---ttggtcctctaactaaaaattgatttatttcgatcctctaa--gtttc 24428658  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||| || |||| |||||||||    
T  24428659 tcactgttactacatttagtcatttctattagttttattcaaataaacgttgggatttgtgttatgtgg 24428727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 392 - 567
Target Start/End: Complemental strand, 32633520 - 32633351
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaag 490  Q
    ||||||||||||||| |||||| |||  ||||||||||||||||| | ||    |||||||||| ||| | ||||||||||||||||| ||||||  |||    
T  32633520 aaaaaggctaaattatctttttggtc--ctctaactatttaattgttatc---ggattggtcctttaactaaaaattgatttatttcggtcctct--aag 32633428  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  32633427 tttctcaccgttactacatttagtcctttatgttagttttattcaaataaacgttagagtttgtgttatgtgggtcc 32633351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 396 - 563
Target Start/End: Complemental strand, 42592235 - 42592074
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||| ||||| |||||||  ||||||||| ||||| ||| |   |||||||||||| ||||| ||||||||||||||||||||||  |||||    
T  42592235 aggcttaattacatttttggtcctct--aactatttagttggtatcaaa---ttggtcctctaactaaaaattgatttatttcgatcctctaa--gtttc 42592143  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||    
T  42592142 tcaccgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgttttatgtgg 42592074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 420 - 567
Target Start/End: Complemental strand, 1994597 - 1994454
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||| ||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||||| |||||||||||||||| ||    
T  1994597 ctctaactatttagttggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcactgttactacatttagtcctt 1994503  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  1994502 tctgttatttttattcaaataaacgttagggtttgtgttatgtgggtcc 1994454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 567
Target Start/End: Complemental strand, 8474293 - 8474132
Alignment:
Q  400 taaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcac 498  Q
    |||||||||||||| |||||||  ||||||||||||||| || |||  || ||||||||||||||| ||||||||||||| ||||||||  |||| | ||    
T  8474293 taaattacctttttggtcctct--aactatttaattggtatc-gaa--ttagtcctctaattaaaaattgatttatttcggtcctctaa--gtttatgac 8474201  T
Q  499 cgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  8474200 cgttactacatttagtcctttctgttagttttattcaaataaacgttagtgtttgtgttatgtgggtcc 8474132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 42591784 - 42591948
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||||||||| |||||||  ||||||||||| ||| || ||   || ||||||||| ||||| ||||||||||||| || |||||  ||||||    
T  42591784 ggctaaattacctttttggtcctct--aactatttaatcggtatcgga---tttgtcctctaactaaaaattgatttatttcggtcttctaa--gtttct 42591876  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42591877 cactgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 42591948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 395 - 565
Target Start/End: Complemental strand, 18464908 - 18464744
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||||| |||||||||||| |||||||  ||||||||||||||| || |||  |||||| ||||| ||||| ||||||||||||| ||||||||  ||||    
T  18464908 aaggcttaattacctttttggtcctct--aactatttaattggtatc-gaa--ttggtcttctaactaaaaattgatttatttcggtcctctaa--gttt 18464816  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||    
T  18464815 atcaccgttactacatttagtcatttctattagttttattcaaataaacattagggtttgtgttatgtgggt 18464744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 397 - 562
Target Start/End: Original strand, 26318182 - 26318341
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||    
T  26318182 ggcttaattacctttttagtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttct 26318274  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtg 562  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||    
T  26318275 caccgttactacatttagtcatttctgttagttttattcaaataaacgttatgatttgtgttatgtg 26318341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 394 - 567
Target Start/End: Complemental strand, 26318635 - 26318468
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtt 492  Q
    |||||||||||||||||||| ||| |||  ||||||||||||||| || ||   ||  |||||||| ||||| ||||||||||||| ||||||||  |||    
T  26318635 aaaggctaaattacctttttggtcatct--aactatttaattggtatcgga---ttaatcctctaactaaaaattgatttatttcggtcctctaa--gtt 26318543  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  26318542 tctgaccgttactacatttagtcttttctgttagttttattcaaataaacgttagtgtttgtgttatgtgggtcc 26318468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 396 - 565
Target Start/End: Original strand, 51509118 - 51509281
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||||||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||||||||||||||  |||||    
T  51509118 aggcttaattacctttttggtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttatttcgatcctctaa--gtttc 51509210  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||| |||||||||||| ||| |||||||||||||||||||||||||||| |||| |||||||||||    
T  51509211 tcaccgttcctacatttagtcctttatgttagttttattcaaataaacgttaggatttgtgttatgtgggt 51509281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 420 - 565
Target Start/End: Complemental strand, 22202045 - 22201904
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||||| ||||||||||||| |||||    
T  22202045 ctctaactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcacggttactacatttaatcatt 22201951  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||    
T  22201950 tctgttagttttattcaaataaacgttagggtttatgctatgtgggt 22201904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 421 - 565
Target Start/End: Complemental strand, 29818605 - 29818465
Alignment:
Q  421 tctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcattt 519  Q
    ||||| |||||||||||| |||||   |||||||||||| ||||| ||||||||||||| |||| |||  |||||||||||||||||||||||||| |||    
T  29818605 tctaattatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctttaa--gtttctcaccgttactacatttagtccttt 29818511  T
Q  520 ctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||    
T  29818510 ctgttagttttattcaaataaacgttagggattgtgttatgtgggt 29818465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 451 - 565
Target Start/End: Original strand, 47303068 - 47303181
Alignment:
Q  451 gtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttaggg 549  Q
    ||||||||||||||| || |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47303068 gtcctctaattaaaaattaatttatttcggtcctctaa--gtttctcaccgttactacatttagtcatttctgttagttttattcaaataaatgttaggg 47303165  T
Q  550 tttgagttatgtgggt 565  Q
    |||| |||||||||||    
T  47303166 tttgtgttatgtgggt 47303181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 39664634 - 39664470
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||| ||||| |||||||  ||||||||||||||| |||||   ||| |||||||| ||||| || |||||||||| ||||||||  ||||||    
T  39664634 ggctaaattacatttttggtcctct--aactatttaattggtatcaga---ttgatcctctaactaaaaattaatttatttcggtcctctaa--gtttct 39664542  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||  |||||||||||||    
T  39664541 caccgttactacatttagtcttttctgttagttttattcaaataaatgttagagtttctgttatgtgggtcc 39664470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 394 - 567
Target Start/End: Original strand, 4773240 - 4773406
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtt 492  Q
    ||||||| |||||||||||| |||||||  ||||||||||||||| |||||   ||| |||||||||||||| ||||||||||||| ||||||||  |||    
T  4773240 aaaggcttaattacctttttggtcctct--aactatttaattggtatcaga---ttgatcctctaattaaaaattgatttatttcggtcctctaa--gtt 4773332  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||| |||||||| ||| ||||||||||||||||||||| |||||| |||  |||||||||||||    
T  4773333 tctcaccgttactatatttagtcctttttgttagttttattcaaataaa-gttaggttttttgttatgtgggtcc 4773406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 422 - 564
Target Start/End: Complemental strand, 12203978 - 12203840
Alignment:
Q  422 ctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttc 520  Q
    ||||||||||||||||| || ||   ||| |||||||||||||| ||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  12203978 ctaactatttaattggtatcgga---ttgatcctctaattaaaaattgatttatttcggtcctctaa--gtttctcaccgttactacatttagtcctttc 12203884  T
Q  521 tgttagttttattcaaataaacgttagggtttgagttatgtggg 564  Q
    || |||||||||||||||||||||||| ||||| ||||||||||    
T  12203883 tgatagttttattcaaataaacgttagagtttgtgttatgtggg 12203840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 398 - 567
Target Start/End: Original strand, 21969630 - 21969793
Alignment:
Q  398 gctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctc 496  Q
    |||||||||||||||| |||  |||||||||||||||||||   |  ||||| ||||||||| | ||||||||||||||||| || |||  |||||||||    
T  21969630 gctaaattacctttttggtc--ctctaactatttaattggt---aacagattagtcctctaactaaaaattgatttatttcggtcttct--aagtttctc 21969722  T
Q  497 accgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  21969723 accgttactacatttagtcctttttgttacttttattcaaataaacgttagagtttgtgttatgtgggtcc 21969793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 398 - 567
Target Start/End: Original strand, 21992066 - 21992229
Alignment:
Q  398 gctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctc 496  Q
    |||||||||||||||| |||  |||||||||||||||||||   |  ||||| ||||||||| | ||||||||||||||||| || |||  |||||||||    
T  21992066 gctaaattacctttttggtc--ctctaactatttaattggt---aacagattagtcctctaactaaaaattgatttatttcggtcttct--aagtttctc 21992158  T
Q  497 accgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  21992159 accgttactacatttagtcctttttgttacttttattcaaataaacgttagagtttgtgttatgtgggtcc 21992229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 392 - 553
Target Start/End: Complemental strand, 45307147 - 45306992
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    |||| |||| |||||||||||| |||||||  ||||||||| ||||| |||||   ||| |||||||| ||||| ||||||||||||| ||||||||  |    
T  45307147 aaaatggcttaattacctttttggtcctct--aactatttagttggtatcaga---ttgatcctctaactaaaaattgatttatttcggtcctctaa--g 45307055  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  45307054 tttctcaccgttactacatttagtcatttttgttagttttattcaaataaatgttagggtttg 45306992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 5900467 - 5900585
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||| | ||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5900467 gattggtcctctaactaaaaattgatttattttggtcctctaa--gtttctcaccgttactacatttagtcatttctattagttttattcaaataaacgt 5900564  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| ||||| |||||    
T  5900565 tagggtttgtgttatatgggt 5900585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 402 - 553
Target Start/End: Original strand, 10505953 - 10506098
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| |||||   || ||||| ||| ||||| ||||||||||||| ||||||||  ||||||||||     
T  10505953 aattacctttttggtcctct--aactatttaattggtatcaga---ttagtcctttaactaaaaattgatttatttcggtcctctaa--gtttctcacca 10506045  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10506046 ttactacatttagtcctttctgttagttttattcaaataaacgttagggtttg 10506098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 396 - 567
Target Start/End: Original strand, 18464455 - 18464620
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||| |||||  ||||||  ||||||||||||||| |  ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||    
T  18464455 aggctaaattacatttttgctcctct--aactatttaattggtattgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttc 18464547  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  18464548 tcactgttactacatttagtcctttatgttagttttattcaaataaacgttagggtttgtgttatgtaggtcc 18464620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 420 - 567
Target Start/End: Complemental strand, 47303445 - 47303304
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| || ||   |||||||||||| ||||| ||||||||||| | |||| |||  |||||||||||||||||||||||||||||    
T  47303445 ctctaactatttaattggtatcgga---ttggtcctctaagtaaaaattgatttattttggtcctttaa--gtttctcaccgttactacatttagtcatt 47303351  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  47303350 tctgttagttttattcaaataaacgttagagttt--gttatgtgggtcc 47303304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 402 - 565
Target Start/End: Complemental strand, 54752608 - 54752451
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||| ||||| |||||   ||||| |||||| ||||| ||||||||||||| | ||||||  |||||||| ||    
T  54752608 aattacctttttggtcctct--aactatttagttggtatcaga---ttggttctctaactaaaaattgatttatttcggtgctctaa--gtttctcatcg 54752516  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  54752515 ttactacatttagtcctttctgttagttttattcaaataaacgttagagtttgtgttatgtgggt 54752451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 446 - 567
Target Start/End: Original strand, 16931650 - 16931770
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    ||||||| |||||| ||||| ||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  16931650 gattggtgctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttactacatttagtcctttctgttagttttatacaaatatacgt 16931747  T
Q  545 tagggtttgagttatgtgggtcc 567  Q
    ||||||||| |||||||||||||    
T  16931748 tagggtttgtgttatgtgggtcc 16931770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 445 - 565
Target Start/End: Original strand, 41834969 - 41835088
Alignment:
Q  445 agattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacg 543  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||||  ||||||||||||||||||||||| || |||||||||||| |||| |||||||||    
T  41834969 agattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttactacatttaatcctttctgttagttgtatttaaataaacg 41835066  T
Q  544 ttagggtttgagttatgtgggt 565  Q
    |||||||||| |||||||||||    
T  41835067 ttagggtttgtgttatgtgggt 41835088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 402 - 563
Target Start/End: Complemental strand, 44894185 - 44894030
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| |||||   || ||||||||| ||||| |||||||||||||  |||||||  |||||||||||    
T  44894185 aattacctttttggtcctct--aactatttaattggtatcaga---ttagtcctctaactaaaaattgatttatttcggacctctaa--gtttctcaccg 44894093  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |||| ||||| |||||||||    
T  44894092 ttactacatttagtcttttatgttagttttattcaaataaacattagagtttgtgttatgtgg 44894030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 4757538 - 4757656
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||| | ||||||||  |||||||||| |||||||||||| || ||||||||||||||||||||||||||||    
T  4757538 gattggtcctctaactaaaaattgatttattttggtcctctaa--gtttctcaccattactacatttattcttttctgttagttttattcaaataaacgt 4757635  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| |||||||||||    
T  4757636 tagggtttgtgttatgtgggt 4757656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 397 - 565
Target Start/End: Original strand, 12203551 - 12203713
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| ||||||||||||| ||||||  ||||||||||||||| || ||   |||||| ||||| ||||| ||| | ||||||| ||||||||  ||||||    
T  12203551 ggcttaattaccttttttatcctct--aactatttaattggtatcgga---ttggtcatctaactaaaaattggtatatttcggtcctctaa--gtttct 12203643  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  12203644 cactgttactacatttagtcttttctgttaattttattcaaataaacgttagggtttgtgttatgtgggt 12203713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 395 - 567
Target Start/End: Original strand, 22201614 - 22201780
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||| |||||||| ||||| |||||||  ||||||||||||||| || ||   ||| |||||||| ||||| ||||||||||||  ||||||||  ||||    
T  22201614 aaggttaaattacatttttggtcctct--aactatttaattggtatcgga---ttgatcctctaaataaaaattgatttatttctgtcctctaa--gttt 22201706  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||| |||||||| ||||    
T  22201707 ctcaccgttactacatttagtcctttctgttaggtttattcaaataaacgttaaggtttgtgttatgtgagtcc 22201780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 396 - 559
Target Start/End: Complemental strand, 28986592 - 28986436
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||||||||| |||||||  || |||||||||||| || ||   |||||||| ||| ||||| ||||||||||||| ||||||||  |||||    
T  28986592 aggctaaattacctttttggtcctct--aattatttaattggtatcgga---ttggtcctttaactaaaaattgatttatttcggtcctctaa--gtttc 28986500  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttat 559  Q
    |||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  28986499 tcactgttacta-atttagtcatttctattagttttattcaaataaacgttagggtttgtgttat 28986436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 446 - 564
Target Start/End: Complemental strand, 47669665 - 47669548
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    ||||||| |||||| ||||| || |||||||||| ||||||||  |||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  47669665 gattggttctctaactaaaaattaatttatttcggtcctctaa--gtttctcaccgttactacatttagtccttactgttagttttattcaaataaacgt 47669568  T
Q  545 tagggtttgagttatgtggg 564  Q
    ||||||||| ||||||||||    
T  47669567 tagggtttgtgttatgtggg 47669548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 395 - 565
Target Start/End: Original strand, 1994167 - 1994331
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||||| |||||| ||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||| | ||||||||  ||||    
T  1994167 aaggcttaattacatttttggtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttattttggtcctctaa--gttt 1994259  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| |||||    
T  1994260 ctcaccgttgctacatttagtcctttctgttagttttattcaaataaacgttcgggtttgtgttatatgggt 1994331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 395 - 565
Target Start/End: Original strand, 1999326 - 1999490
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||||| |||||| ||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||| | ||||||||  ||||    
T  1999326 aaggcttaattacatttttggtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttattttggtcctctaa--gttt 1999418  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| |||||    
T  1999419 ctcaccgttgctacatttagtcctttctgttagttttattcaaataaacgttcgggtttgtgttatatgggt 1999490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 402 - 552
Target Start/End: Complemental strand, 11256548 - 11256404
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaat-tgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| |||||   |||||||||||| |||||  |||||||||||| |||| |||  |||||||||||    
T  11256548 aattacctttttggtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaaatgatttatttcggtcctttaa--gtttctcaccg 11256456  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggttt 552  Q
    |||||| |||||||| ||| ||||||||||||||||||||||||||||||||    
T  11256455 ttactaaatttagtcctttttgttagttttattcaaataaacgttagggttt 11256404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 54752163 - 54752327
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||||||||| |||||| |||||||  ||||||||||||||| |   |||||||||||| ||| ||||| ||||||||||||| || | |||  ||||||    
T  54752163 ggctaaattatctttttggtcctct--aactatttaattggtat---aagattggtcctgtaactaaaaattgatttatttcggtcatataa--gtttct 54752255  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||  || |||||||||||||||||||||||||| ||| |||||| |||||||||||||    
T  54752256 caccgttactacatttgatcctttctgttagttttattcaaataaacattatggtttgtgttatgtgggtcc 54752327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 446 - 562
Target Start/End: Original strand, 8473890 - 8474005
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| | ||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8473890 gattggtcctctaactaaaaattgatttatttcggtactctaa--gtttctcactgttactacatttagtcatttctgttagttttattcaaataaacgt 8473987  T
Q  545 tagggtttgagttatgtg 562  Q
    || | |||| ||||||||    
T  8473988 tatgatttgtgttatgtg 8474005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 445 - 565
Target Start/End: Complemental strand, 21970036 - 21969917
Alignment:
Q  445 agattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacg 543  Q
    ||||||||||||||| ||||| || |||||||||  |||||| |  ||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  21970036 agattggtcctctaactaaaaattcatttatttcagtcctctga--gtttctcactgttactacatttagtcatttctgttagttttatttaaataaacg 21969939  T
Q  544 ttagggtttgagttatgtgggt 565  Q
    |||||||||| |||||||||||    
T  21969938 ttagggtttgtgttatgtgggt 21969917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 445 - 565
Target Start/End: Complemental strand, 21992472 - 21992353
Alignment:
Q  445 agattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacg 543  Q
    ||||||||||||||| ||||| || |||||||||  |||||| |  ||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  21992472 agattggtcctctaactaaaaattcatttatttcagtcctctga--gtttctcactgttactacatttagtcatttctgttagttttatttaaataaacg 21992375  T
Q  544 ttagggtttgagttatgtgggt 565  Q
    |||||||||| |||||||||||    
T  21992374 ttagggtttgtgttatgtgggt 21992353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 396 - 565
Target Start/End: Complemental strand, 53716744 - 53716581
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||||||||| ||| |||  ||||||||||||||| |||||   |||||| ||||| ||||| ||||||||||||| |||| |||  ||||     
T  53716744 aggcttaattacctttttggtcatct--aactatttaattggtatcaga---ttggtcttctaactaaaaattgatttatttcggtcctttaa--gttta 53716652  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||| | ||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||    
T  53716651 tcatcattactacatttagtcatttatgttagttttattcaaattaacgttagggtttgtgttatgtgggt 53716581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 446 - 561
Target Start/End: Complemental strand, 15986640 - 15986526
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||  | ||||||||||||||||||||    
T  15986640 gattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttactacatttagtcctttcaataagttttattcaaataaacgt 15986543  T
Q  545 tagggtttgagttatgt 561  Q
    ||||||||| |||||||    
T  15986542 tagggtttgtgttatgt 15986526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 462 - 565
Target Start/End: Original strand, 15986296 - 15986397
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    ||||||||||||||||| ||||||||  |||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||| ||||| |||||||    
T  15986296 aaaattgatttatttcggtcctctaa--gtttctcaccgttactgcatttagtcctttctgttagttttattcaaataaatgttagagtttgtgttatgt 15986393  T
Q  562 gggt 565  Q
    ||||    
T  15986394 gggt 15986397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 420 - 563
Target Start/End: Original strand, 27801510 - 27801649
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||||| ||||||| ||||| || ||    
T  27801510 ctctaactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcactgttactagatttattcctt 27801604  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgg 563  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||    
T  27801605 tctgttagttttattcaaataaacgttagagtttctgttatgtgg 27801649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 396 - 559
Target Start/End: Original strand, 46152614 - 46152771
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||| | ||| |||||||  ||||||||||||||  || |||  || ||||||||| ||||| ||||||||||||| ||||||||  |||||    
T  46152614 aggctaaattacatctttggtcctct--aactatttaattggcatc-gaa--ttagtcctctaactaaaaattgatttatttcggtcctctaa--gtttc 46152706  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttat 559  Q
    ||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  46152707 tcaccatcactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttat 46152771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 445 - 565
Target Start/End: Complemental strand, 22152252 - 22152133
Alignment:
Q  445 agattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacg 543  Q
    |||||| |||||||| ||||| ||||||||||||  |||||| |  ||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  22152252 agattgatcctctaactaaaaattgatttatttcagtcctctga--gtttctcactgttactacatttagtcgtttctgttagttttattcaaataaacg 22152155  T
Q  544 ttagggtttgagttatgtgggt 565  Q
    |||||||||| ||||| |||||    
T  22152154 ttagggtttgtgttatatgggt 22152133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 462 - 567
Target Start/End: Complemental strand, 51509508 - 51509405
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    ||||||||||||||||| || |||||  ||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||  ||||||    
T  51509508 aaaattgatttatttcggtcatctaa--gtttctcactgttactacatttagtcttttctgttagttttattcaaataaatgttagggtttgtattatgt 51509411  T
Q  562 gggtcc 567  Q
    ||||||    
T  51509410 gggtcc 51509405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 395 - 567
Target Start/End: Original strand, 22151843 - 22152009
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagttt 493  Q
    ||||||||||||| ||||| |||  || ||||||||||||||||   |  ||||| ||||||||| | ||||||||||||||||| |  |||  ||||||    
T  22151843 aaggctaaattacatttttggtc--ctataactatttaattggt---aacagattagtcctctaactaaaaattgatttatttcggttttct--aagttt 22151935  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||||||| ||| ||||| |||||||||||||    
T  22151936 ctcaccgttactacatttagtcctttttgttaattttattcaaataaacgatagagtttgtgttatgtgggtcc 22152009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 488 - 565
Target Start/End: Original strand, 32633150 - 32633227
Alignment:
Q  488 aagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  32633150 aagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttatgatatgtgggt 32633227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 402 - 553
Target Start/End: Complemental strand, 16932051 - 16931906
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  |||| |||||||||| || ||   || ||||||||| ||||| ||||||||||||  ||||||||  |||||||||||    
T  16932051 aattacctttttggtcctct--aactttttaattggtatcgga---tttgtcctctaactaaaaattgatttatttctgtcctctaa--gtttctcaccg 16931959  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  16931958 ttactacatttagtcttttctgttagtcttattcaaataaacgttagagtttg 16931906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 397 - 548
Target Start/End: Original strand, 45306832 - 45306977
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaatt-gatttatttcgatcctctaaaagtttct 495  Q
    |||||||||||||||||  ||||||  ||||||||||||||| || ||   || ||||||||| ||||||| ||||||||||| ||||||||  ||||||    
T  45306832 ggctaaattacctttttgatcctct--aactatttaattggtatcgga---ttagtcctctaactaaaatttgatttatttcggtcctctaa--gtttct 45306924  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagg 548  Q
    ||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  45306925 cactgttactatatttagtcctttctgttagttttattcaaataaatgttagg 45306977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 446 - 567
Target Start/End: Original strand, 39951401 - 39951521
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||| ||||||||||||||| |||||||||||||||||| |||  |||||||| |||||||| |||||||  ||| ||||||||||||||||||||| ||    
T  39951401 gattagtcctctaattaaaaattgatttatttcgatcctttaa--gtttctcatcgttactatatttagttctttatgttagttttattcaaataaatgt 39951498  T
Q  545 tagggtttgagttatgtgggtcc 567  Q
    ||| ||||| |||||||||||||    
T  39951499 tagagtttgtgttatgtgggtcc 39951521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 468 - 565
Target Start/End: Complemental strand, 39241741 - 39241646
Alignment:
Q  468 gatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||| ||||||||  ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||  |||| |||||||||||    
T  39241741 gatttatttcggtcctctaa--gtttctcactgttactacatttagtcctttctgttagttttattcaaataaacgttagaatttgtgttatgtgggt 39241646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 420 - 565
Target Start/End: Complemental strand, 4773671 - 4773530
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| |||||   ||| |||||||| ||||| ||||||||||| | || |||||  ||||||||| |||||||||||||||| ||    
T  4773671 ctctaactatttaattggtatcaga---ttgatcctctaactaaaaattgatttattttggtcttctaa--gtttctcactgttactacatttagtcctt 4773577  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    | |||||||||||||||||||||||| | |||||| | |||||||||    
T  4773576 tatgttagttttattcaaataaacgtcaaggtttgtgctatgtgggt 4773530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 420 - 565
Target Start/End: Complemental strand, 19883669 - 19883528
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaat-tgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| || ||   ||||| |||||| |||||  |||||||||||| ||||||||  ||||||||| ||||||||||||| || ||    
T  19883669 ctctaactatttaattggtatcgga---ttggttctctaactaaaaaatgatttatttcggtcctctaa--gtttctcacagttactacatttaatcgtt 19883575  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    | | ||| ||||||||||||||||||||||||||| |||||||||||    
T  19883574 tttattaattttattcaaataaacgttagggtttgtgttatgtgggt 19883528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 462 - 558
Target Start/End: Complemental strand, 41835315 - 41835221
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagtta 558  Q
    ||||||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||| ||||    
T  41835315 aaaattgatttatttcggtcctctaa--gtttctcaccgttactacatttagtcctttctattagttttatttaaataaacgttagtgtttgtgtta 41835221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 396 - 567
Target Start/End: Original strand, 11256102 - 11256267
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaat-tgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||||||||| |||||||  ||||||||||||||| || ||   ||| |||||||| |||||  | ||||||||||||||| |||  |||||    
T  11256102 aggcttaattacctttttagtcctct--aactatttaattggtatcgga---ttgatcctctaactaaaaaataatttatttcgatcctttaa--gtttc 11256194  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||| ||||||||||||||||| ||| || |||||||||||||||||||||||| ||||  |||||||| ||||    
T  11256195 tcatcgttactacatttagtcctttttgatagttttattcaaataaacgttagagtttctgttatgtgtgtcc 11256267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 462 - 562
Target Start/End: Complemental strand, 46152999 - 46152904
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    ||||||||||||||||| |||| |||  |||||||||   |||||||||||||||||| |||||||||||||||||||||||||  |||||| |||||||    
T  46152999 aaaattgatttatttcggtcctataa--gtttctcac---tactacatttagtcatttatgttagttttattcaaataaacgttgaggtttgtgttatgt 46152905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 504 - 565
Target Start/End: Original strand, 28986261 - 28986322
Alignment:
Q  504 ctacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||    
T  28986261 ctacatttagtcatttctgttagttttattcaaataaacgttagagtttgtattatgtgggt 28986322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 553
Target Start/End: Complemental strand, 44317665 - 44317515
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  ||||||||||||||| || |    |||||||||||| ||||| ||||||||||| | ||||||||  |||| |    
T  44317665 ggcttaattacctttttggtcctct--aactatttaattggtatcggt---ttggtcctctaactaaaaattgatttattttggtcctctaa--gtttat 44317573  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    ||||||||||| |||| ||| ||||||||||||||| |  || |||||||||||||||    
T  44317572 caccgttactatatttcgtcctttctgttagttttaatagaagaaacgttagggtttg 44317515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 553
Target Start/End: Original strand, 49528148 - 49528299
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||||||||| |||||||  ||||||||||||||| || |    |||||||||||  ||||| ||||||||||| | ||||||||  ||||     
T  49528148 aggcttaattacctttttggtcctct--aactatttaattggtatcggt---ttggtcctctagctaaaaattgatttattttggtcctctaa--gttta 49528240  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    |||||||||||| |||| ||| ||||||||||||||| |  || |||||||||||||||    
T  49528241 tcaccgttactatatttcgtcctttctgttagttttaatagaagaaacgttagggtttg 49528299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 462 - 529
Target Start/End: Complemental strand, 7681512 - 7681447
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttt 529  Q
    ||||||||||||||||| ||||||||  ||||||||||||||||||||| |||| |||||||||||||    
T  7681512 aaaattgatttatttcggtcctctaa--gtttctcaccgttactacattcagtcctttctgttagttt 7681447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 402 - 553
Target Start/End: Original strand, 13866025 - 13866170
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||||| || |    |||||||||||| ||||| ||||||||||| | |||| |||  |||| ||||||    
T  13866025 aattacctttttggtcctct--aactatttaattggtatcggt---ttggtcctctaactaaaaattgatttattttggtcctttaa--gtttatcaccg 13866117  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    |||||| |||| ||| ||||||||||||||| |  || |||||||||||||||    
T  13866118 ttactatatttcgtcctttctgttagttttaatagaagaaacgttagggtttg 13866170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 421 - 520
Target Start/End: Original strand, 15790701 - 15790796
Alignment:
Q  421 tctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcattt 519  Q
    |||||||||||||||||| |||||   |||||||||||| ||||| |||||||||||| ||||  |||  |||||||||||||||||||||||||| |||    
T  15790701 tctaactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttccatcccttaa--gtttctcaccgttactacatttagtccttt 15790795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 420 - 514
Target Start/End: Original strand, 28985530 - 28985620
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaatt-gatttatttcgatcctctaaaagtttctcaccgttactacatttagt 514  Q
    ||||||||||||||||||| |||||   |||||||||||| ||||||| ||||||||||| |||| |||  |||||||||||||| ||||||||||    
T  28985530 ctctaactatttaattggtatcaga---ttggtcctctaactaaaatttgatttatttcggtcctataa--gtttctcaccgttattacatttagt 28985620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 462 - 565
Target Start/End: Complemental strand, 39951742 - 39951645
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    |||||||||||||||| || ||||||  |||| ||| ||||| |||||||||||||||||    |||| |||| ||||||| ||||| ||||||||||||    
T  39951742 aaaattgatttatttcaattctctaa--gtttttcaacgttattacatttagtcatttct----gtttcattcgaataaacattaggttttgagttatgt 39951649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 521
Target Start/End: Original strand, 7163494 - 7163568
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttct 521  Q
    |||||||| ||||| ||||| || |||||||||| ||||||||  ||||||||| |||||||||||||||| |||||    
T  7163494 gattggtcatctaactaaaaattaatttatttcggtcctctaa--gtttctcacagttactacatttagtcctttct 7163568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 523 - 562
Target Start/End: Original strand, 19883359 - 19883398
Alignment:
Q  523 ttagttttattcaaataaacgttagggtttgagttatgtg 562  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  19883359 ttagttttatttaaataaacgttagggtttgtgttatgtg 19883398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 1e-45; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 395 - 567
Target Start/End: Original strand, 10991849 - 10992015
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    ||||||||||||||||||| |||||||  ||||||||||||||| |||||   ||| |||||||| ||||| ||||||||||||| |||||||||  |||    
T  10991849 aaggctaaattacctttttggtcctct--aactatttaattggtatcaga---ttgatcctctaactaaaaattgatttatttcggtcctctaaa--ttt 10991941  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  10991942 ttcaccgttactacatttagtcatttctgttagttttattcaaataaacgttacagtttgtgttatgtgggtcc 10992015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 400 - 567
Target Start/End: Original strand, 7469169 - 7469330
Alignment:
Q  400 taaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcac 498  Q
    |||||||||||||| | |||||  ||||||||||||||| |||||   || ||||||||| ||||| ||||||||||||| ||||||||  |||||||||    
T  7469169 taaattacctttttggccctct--aactatttaattggtatcaga---ttagtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcac 7469261  T
Q  499 cgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7469262 cgttactacatttagtcttttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 7469330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 8174336 - 8174171
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||||||||| |||||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| || |||||||||| |||| ||||  ||||    
T  8174336 aggctaaattatctttttggtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaattaatttatttcggtcctttaaa--tttc 8174244  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8174243 tcaccgtttctacatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 8174171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 396 - 562
Target Start/End: Original strand, 24138067 - 24138227
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||||||||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| ||| ||||  |||||    
T  24138067 aggctaaattacctttttggtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtccactaa--gtttc 24138159  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtg 562  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||    
T  24138160 tcaccgttactacatttagtcctttctgttagttttattcaaataaatgttagggtttgtgttatgtg 24138227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 396 - 567
Target Start/End: Original strand, 13192987 - 13193152
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||| ||||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||    
T  13192987 aggctaaattacttttttggtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttc 13193079  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| |||||    
T  13193080 tcactgttactacatttagtcttttctgttagttttattcaaataaacgttagagtttgtgttatgttggtcc 13193152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 392 - 567
Target Start/End: Original strand, 15744452 - 15744621
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    ||||| |||||||||||||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |    
T  15744452 aaaaatgctaaattacctttttggtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--g 15744544  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15744545 tttctaactgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 15744621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 394 - 565
Target Start/End: Original strand, 24371964 - 24372129
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtt 492  Q
    ||||||| |||||||||||| |||||||  ||||||||| ||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||  |||    
T  24371964 aaaggcttaattacctttttggtcctct--aactatttagttggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtt 24372056  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  24372057 tctcaccgttactacatttagttctttctgttagttttattcaaataaacgttagggtttgtattatgtgggt 24372129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 24372418 - 24372253
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||| ||||| |||||||  ||||||||||||||| |||||   || ||||||||| ||||| ||||||||||| | ||||||||  |||||    
T  24372418 aggctaaattacatttttggtcctct--aactatttaattggtatcaga---ttagtcctctaactaaaaattgatttattttggtcctctaa--gtttc 24372326  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  24372325 tcaccgttactacatttagtcatttctgttagttttattcaaataaacattaggatttgtgttatgtgggtcc 24372253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 396 - 565
Target Start/End: Original strand, 15405755 - 15405918
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||| ||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| || |||||  |||||    
T  15405755 aggcttaattacatttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcttctaa--gtttc 15405847  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  15405848 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagagtttgtgttatgtgggt 15405918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 402 - 565
Target Start/End: Original strand, 8173890 - 8174047
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccg 500  Q
    |||||||||||| |||||||  ||||||||||||| | |||||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||||||||    
T  8173890 aattacctttttggtcctct--aactatttaattgatatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccg 8173982  T
Q  501 ttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||| ||||||||| |||||||||||| |||||||||||||| |||||||||||    
T  8173983 ttactacatttagtcctttctgttaattttattcaaatgaacgttagggtttgtgttatgtgggt 8174047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 33470374 - 33470209
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||||||||| |||||||  ||||||||| ||||| |||||   ||| |||||| | ||||| ||||||||||||| ||||||||  |||||    
T  33470374 aggcttaattacctttttggtcctct--aactatttagttggtatcaga---ttgatcctctgactaaaaattgatttatttcggtcctctaa--gtttc 33470282  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33470281 tcactgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 33470209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 448 - 565
Target Start/End: Complemental strand, 10992255 - 10992139
Alignment:
Q  448 ttggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgtta 546  Q
    |||||||||||||||||| ||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10992255 ttggtcctctaattaaaaattgatttatttcggtcctctaa--gtttctcaccgttactacatttagtcctttctgttagttttattcaaataaacgtta 10992158  T
Q  547 gggtttgagttatgtgggt 565  Q
    | ||||| |||||||||||    
T  10992157 gagtttgtgttatgtgggt 10992139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 396 - 565
Target Start/End: Complemental strand, 7496430 - 7496267
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||| ||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||||| |||| |||  |||||    
T  7496430 aggcttaattacatttttagtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctttaa--gtttc 7496338  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7496337 tcaccgttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggt 7496267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 420 - 565
Target Start/End: Complemental strand, 13193417 - 13193276
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| |||||   ||| |||||||| ||||| ||||||||||||| ||||||||  |||||||||||||||||||||||||| ||    
T  13193417 ctctaactatttaattggtatcaga---ttgatcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttactacatttagtcttt 13193323  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||| ||||||||||||||||||||||||| ||||| |||||||||||    
T  13193322 tctattagttttattcaaataaacgttagagtttgtgttatgtgggt 13193276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 396 - 567
Target Start/End: Original strand, 16305024 - 16305189
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||| ||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||    
T  16305024 aggctaaattacattttt-gtcctct--aactatttaattggtatcggat--ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttc 16305116  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||  ||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16305117 tcacaattactacatttagttctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 16305189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 446 - 567
Target Start/End: Complemental strand, 19847724 - 19847604
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| || |||||||||| || |||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19847724 gattggtcctctaactaaaaattaatttatttcggtcttctaa--gtttctcaccgttactacatttagtcctttctgttagttttattcaaataaacgt 19847627  T
Q  545 tagggtttgagttatgtgggtcc 567  Q
    ||||||||| |||||||||||||    
T  19847626 tagggtttgtgttatgtgggtcc 19847604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 29472242 - 29472406
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaatt-gatttatttcgatcctctaaaagtttct 495  Q
    |||| |||||||||||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| | ||||||||| | ||||||||  ||||||    
T  29472242 ggctcaattacctttttggtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaatagatttattttggtcctctaa--gtttct 29472334  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||| ||||    
T  29472335 caccgttcctacatttagtcctttctgttagttttattcaaataaacgttaaggtttgtgttatgtgagtcc 29472406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 402 - 565
Target Start/End: Original strand, 2147890 - 2148048
Alignment:
Q  402 aattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaat--tgatttatttcgatcctctaaaagtttctcacc 499  Q
    |||||||||||| |||||||  |||||||||||| || |||||   |||||||||||| |||||   ||||||||||||  |||||||  ||||||||||    
T  2147890 aattacctttttggtcctct--aactatttaattagtatcaga---ttggtcctctaactaaaaaaatgatttatttcgggcctctaa--gtttctcacc 2147982  T
Q  500 gttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  2147983 gttactacatttagtcctttctgttagttttattcaaataaacgttagagtttgtgttatgtgggt 2148048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 420 - 565
Target Start/End: Complemental strand, 17052483 - 17052342
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    |||||||||||||||||||   |  ||||||||||||||| | ||||||||||||||| | ||||||  |||||||||||| ||||||||||||||||||    
T  17052483 ctctaactatttaattggt---attagattggtcctctaactaaaaattgatttattttggtcctct--aagtttctcaccnttactacatttagtcatt 17052389  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  17052388 tctgttagtttcattcaaataaacgttagtgtttgtgttatgtgggt 17052342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 12860424 - 12860542
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||| | ||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12860424 gattggtcctctaactaaaaattgatttattttggtcctctaa--gtttctcaccgttactacatttagtcctttctgttagttttattcaaataaacgt 12860521  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| ||||| |||||    
T  12860522 tagggtttgtgttatatgggt 12860542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 448 - 567
Target Start/End: Complemental strand, 12860771 - 12860653
Alignment:
Q  448 ttggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgtta 546  Q
    |||||||||||| ||||| ||||||||||||| ||||||||  |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12860771 ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttttcaccgttactacatttagtcctttctgttagttttattcaaataaacgtta 12860674  T
Q  547 gggtttgagttatgtgggtcc 567  Q
     |||||| |||||||||||||    
T  12860673 cggtttgtgttatgtgggtcc 12860653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 462 - 562
Target Start/End: Complemental strand, 29472631 - 29472533
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    ||||||||||||||| | |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29472631 aaaattgatttattttggtcctctaaa--tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgt 29472534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 446 - 565
Target Start/End: Complemental strand, 30898707 - 30898589
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||| | ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30898707 gattggtcctctaactaaaaattgatttattttgttcctctaa--gtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 30898610  T
Q  545 tagggtttgagttatgtgggt 565  Q
    | ||||||| ||||| |||||    
T  30898609 tcgggtttgtgttatatgggt 30898589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 462 - 565
Target Start/End: Original strand, 34735404 - 34735505
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    ||||||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||    
T  34735404 aaaattgatttatttcggtcctctaa--gtttctcaccgttactacatttagtcctttctattagttttattcaaataaacgttagggtttgtgttatgt 34735501  T
Q  562 gggt 565  Q
    ||||    
T  34735502 gggt 34735505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 15406205 - 15406042
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||||||||| |||||||  ||||||||||||||| |  ||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||    
T  15406205 ggctaaattaccttttt-gtcctct--aactatttaattggtattgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttct 15406114  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
     || ||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  15406113 tactgttactacatttaatcttttctgttagttttattcaaataaacgttagggtttgtgttatgtgagtcc 15406042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 446 - 567
Target Start/End: Complemental strand, 26182106 - 26181986
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| |||||||||||||  |||||||  ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  26182106 gattggtcctctaactaaaaattgatttatttcggccctctaa--gtttctcactgttactacatttagtcctttctgttagttttattcaaataaacgt 26182009  T
Q  545 tagggtttgagttatgtgggtcc 567  Q
    ||| ||||| |||||||||||||    
T  26182008 tagagtttgtgttatgtgggtcc 26181986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 34735793 - 34735629
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||| ||||| |||||||  ||||||||||||||| || ||   || ||||||||| ||||| ||||||||||||| |||| |||  ||||||    
T  34735793 ggctaaattacatttttggtcctct--aactatttaattggtatcgga---ttagtcctctaactaaaaattgatttatttcggtcctttaa--gtttct 34735701  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||| ||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  34735700 cactgttactatatttagtcctttctgttagttttattcaaataaacgttagagtttgtgttatgtgggtcc 34735629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 38332704 - 38332868
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttct 495  Q
    ||||||||||| ||||| ||  |||||||||||||||||||| |  ||   ||| |||||||| ||||| ||||||||||||| ||||||||  ||||||    
T  38332704 ggctaaattacatttttggt--tctctaactatttaattggtattgga---ttgatcctctaactaaaaattgatttatttcggtcctctaa--gtttct 38332796  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||  ||||||||||||    
T  38332797 caccgttactatatttagtcctttctgttagttttattcaaataaatgttagggtttgttttatgtgggtcc 38332868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 420 - 565
Target Start/End: Complemental strand, 16305454 - 16305313
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| || ||   |||||||||||| ||||| |||||||||||| |||||||||  |||||||||||||||||||||||||| ||    
T  16305454 ctctaactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcaatcctctaa--gtttctcaccgttactacatttagtcttt 16305360  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    | ||||||||||||||||||||  |||| |||||| |||||||||||    
T  16305359 tttgttagttttattcaaataagagttatggtttgtgttatgtgggt 16305313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 420 - 559
Target Start/End: Complemental strand, 38333109 - 38332974
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| || ||   ||| |||||||| ||||| ||||||||||||| ||||||||  ||||||||| |||||||||||||||||||    
T  38333109 ctctaactatttaattggtatcgga---ttgatcctctaactaaaaattgatttatttcggtcctctaa--gtttctcactgttactacatttagtcatt 38333015  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttat 559  Q
    ||| |||||||||||||||||||||||||| |||| |||||    
T  38333014 tctattagttttattcaaataaacgttaggatttgtgttat 38332974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 446 - 563
Target Start/End: Original strand, 42834466 - 42834582
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| | ||||||  |||||||||  ||||||||||||||| ||||||||||||||||||||||||||||    
T  42834466 gattggtcctctaactaaaaattgatttatttcggttctctaa--gtttctcactattactacatttagtcttttctgttagttttattcaaataaacgt 42834563  T
Q  545 tagggtttgagttatgtgg 563  Q
    ||||||||| |||||||||    
T  42834564 tagggtttgtgttatgtgg 42834582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 396 - 565
Target Start/End: Original strand, 7495979 - 7496142
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||| ||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||    
T  7495979 aggcttaattacatttttggtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttc 7496071  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||| ||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  7496072 tcactgttactatatttagtcctttctgttagttttattcaaataaacgttagagtttgtgttatatgggt 7496142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 446 - 562
Target Start/End: Original strand, 19815748 - 19815863
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    ||||||| |||||| ||||| ||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19815748 gattggttctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttactacatttagtcctttctgttagttttattcaaataaacgt 19815845  T
Q  545 tagggtttgagttatgtg 562  Q
    || | |||| ||||||||    
T  19815846 tatgatttgtgttatgtg 19815863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 395 - 567
Target Start/End: Complemental strand, 19816156 - 19815990
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    ||||||||||||||||||| ||||||   ||||||||||||||| || ||   || ||||||||| ||||| ||||||||||||| ||||||||  ||||    
T  19816156 aaggctaaattacctttttggtcctca--aactatttaattggtatcgga---ttagtcctctaactaaaaattgatttatttcggtcctctaa--gttt 19816064  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |  ||| ||||||||||||||| |||||| |||||||||||||||||||||||| || || |||||||||||||    
T  19816063 cagaccattactacatttagtcctttctgctagttttattcaaataaacgttagagtctgtgttatgtgggtcc 19815990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 423 - 567
Target Start/End: Complemental strand, 2148312 - 2148172
Alignment:
Q  423 taactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttct 521  Q
    |||||||||||||||| || ||   ||| |||||||| ||||| ||||||||||| | |||| |||  |||||||| |||||||||||||||||||||||    
T  2148312 taactatttaattggtatcgga---ttgatcctctaactaaaaattgatttattttggtcctttaa--gtttctcatcgttactacatttagtcatttct 2148218  T
Q  522 gttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||    
T  2148217 gttagttttattcaaataaacgttagagtttctgttatgtgggtcc 2148172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 462 - 567
Target Start/End: Complemental strand, 24138896 - 24138792
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcattt-ctgttagttttattcaaataaacgttagggtttgagttatg 560  Q
    ||||||||||||||||| || |||||  ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||    
T  24138896 aaaattgatttatttcggtcttctaa--gtttctcactgttactacatttagtctttttctgttagttttattcaaataaacgttagggtttgtgttatg 24138799  T
Q  561 tgggtcc 567  Q
    |||||||    
T  24138798 tgggtcc 24138792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 36713588 - 36713752
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttct 495  Q
    |||||||||||||||||  ||||||  ||||||||||||||| ||    ||||| || ||||| | |||||||||||||||   |||||||||  |||||    
T  36713588 ggctaaattacctttttgatcctct--aactatttaattggtatc---ggattgatcttctaactaaaaattgatttatttatgtcctctaaa--tttct 36713680  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||  |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  36713681 cagtgttactacatttagtcttttctgttagttttattcaaataaacgttagagtttgtgttatgtgggtcc 36713752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 446 - 562
Target Start/End: Complemental strand, 41474488 - 41474373
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||| ||||||||| ||||| ||||||||||||| |||||| |  ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  41474488 gattagtcctctaactaaaaattgatttatttcggtcctctga--gtttctcactgttactacatttagtcctttctgttagttttattcaaataaacgt 41474391  T
Q  545 tagggtttgagttatgtg 562  Q
    ||| ||||| ||||||||    
T  41474390 tagagtttgtgttatgtg 41474373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 446 - 562
Target Start/End: Original strand, 26181744 - 26181859
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    ||||||||| |||| ||||| ||||||||||||| ||||||||  |||||||||||||||||||| || || |||||||||||||||||||||||||| |    
T  26181744 gattggtccactaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttactacatatattcctttctgttagttttattcaaataaacct 26181841  T
Q  545 tagggtttgagttatgtg 562  Q
    || |||||| ||||||||    
T  26181842 taaggtttgtgttatgtg 26181859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 421 - 566
Target Start/End: Original strand, 41474104 - 41474245
Alignment:
Q  421 tctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcattt 519  Q
    |||||||||||||||||| || ||   | |||||| ||||||||| || |||||||||| ||||||||  ||||||||| |||| ||||||||||| |||    
T  41474104 tctaactatttaattggtatcgga---tcggtcctgtaattaaaaatttatttatttcggtcctctaa--gtttctcactgttattacatttagtctttt 41474198  T
Q  520 ctgttagttttattcaaataaacgttagggtttgagttatgtgggtc 566  Q
     ||||||||||||| ||||||||||||| ||||| ||||||||||||    
T  41474199 atgttagttttatttaaataaacgttagtgtttgtgttatgtgggtc 41474245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 490 - 565
Target Start/End: Complemental strand, 36713948 - 36713873
Alignment:
Q  490 gtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  36713948 gtttctcaccgttaccacacttagtcatttctgtttgttttattcaaataaacgttagagtttgtgttatgtgggt 36713873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 462 - 532
Target Start/End: Original strand, 8444883 - 8444951
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttat 532  Q
    |||||| |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  8444883 aaaattaatttatttcggtcctctaa--gtttctcaccgttactacatttagtcatttctgttagttttat 8444951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 420 - 565
Target Start/End: Complemental strand, 15744876 - 15744745
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||| ||||| |||||   |||||||||||| ||||| ||||||||||| | ||||||||  ||||||||||||||||||||||||||       
T  15744876 ctctaactatttagttggtatcaga---ttggtcctctaactaaaaattgatttattttggtcctctaa--gtttctcaccgttactacatttagtc--- 15744785  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
           |||||||| ||||||||||||||||||| ||||| |||||    
T  15744784 -------gttttatttaaataaacgttagggtttgtgttatatgggt 15744745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 513
Target Start/End: Original strand, 17032592 - 17032703
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||||||||| |||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||| ||  |||||    
T  17032592 aggctaaattatctttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctcgaa--gtttc 17032684  T
Q  495 tcaccgttactacatttag 513  Q
    |||||||||||||||||||    
T  17032685 tcaccgttactacatttag 17032703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 394 - 553
Target Start/End: Original strand, 8962357 - 8962509
Alignment:
Q  394 aaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtt 492  Q
    ||||| ||||||| |||||| |||||||  |||||||||||| || |||||   |||||||||||| ||||| ||||||||||||| ||| || || |||    
T  8962357 aaagggtaaattatctttttggtcctct--aactatttaattagtatcaga---ttggtcctctaactaaaaattgatttatttcggtcc-ctcaa-gtt 8962449  T
Q  493 tctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    ||||||||||||||||||||||| ||||  |||  |||| | ||| |||||||||||||||    
T  8962450 tctcaccgttactacatttagtcttttccattaaatttaattaaa-aaacgttagggtttg 8962509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 396 - 513
Target Start/End: Original strand, 17050928 - 17051039
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||||||||| |||||| |||||||  ||||||||||||||| |  ||   |||||||||||| ||||| ||||||||||||| ||||| ||  |||||    
T  17050928 aggctaaattatctttttggtcctct--aactatttaattggtattgga---ttggtcctctaactaaaaattgatttatttcggtcctcgaa--gtttc 17051020  T
Q  495 tcaccgttactacatttag 513  Q
    |||||||||||||||||||    
T  17051021 tcaccgttactacatttag 17051039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 519
Target Start/End: Complemental strand, 8445237 - 8445123
Alignment:
Q  399 ctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctca 497  Q
    |||||||||||||||||||||||  ||||||||||||||| || ||   || |  |||||||||||| |||||||| |||| ||||||||  |||| |||    
T  8445237 ctaaattaccttttttgtcctct--aactatttaattggtatcgga---ttagcactctaattaaaaattgatttacttcggtcctctaa--gtttatca 8445145  T
Q  498 ccgttactacatttagtcattt 519  Q
    | ||||||||||||||||||||    
T  8445144 cagttactacatttagtcattt 8445123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 509 - 561
Target Start/End: Complemental strand, 7469510 - 7469458
Alignment:
Q  509 tttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| |||||||    
T  7469510 tttagtcatttatgttagttttattcaaataaacgttatggtttgtgttatgt 7469458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 567
Target Start/End: Original strand, 17052164 - 17052222
Alignment:
Q  510 ttagtcatttctgttagttttattcaaataaa-cgttagggtttgagttatgtgggtcc 567  Q
    |||||| || |||||||||||||||||||||| |||||||||||| |||||||||||||    
T  17052164 ttagtctttgctgttagttttattcaaataaaacgttagggtttgtgttatgtgggtcc 17052222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 513 - 552
Target Start/End: Complemental strand, 13810528 - 13810489
Alignment:
Q  513 gtcatttctgttagttttattcaaataaacgttagggttt 552  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  13810528 gtcatttctgttaattttattcaaaaaaacgttagggttt 13810489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 93; Significance: 5e-45; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 392 - 567
Target Start/End: Original strand, 72757 - 72926
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    ||||||||| |||||||||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |    
T  72757 aaaaaggcttaattacctttttggtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--g 72849  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  72850 tttctcaccgttactacatttattcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 72926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 396 - 565
Target Start/End: Complemental strand, 73212 - 73049
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||| ||||| |||||||  ||||||||| ||||| || ||   |||||||||||| ||||| ||||||||||| | ||||||||  |||||    
T  73212 aggcttaattacatttttggtcctct--aactatttagttggtatcgga---ttggtcctctaactaaaaattgatttattttggtcctctaa--gtttc 73120  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| |||||    
T  73119 tcaccgttactacatttagtcctttctgttagttttattcaaataaacgttcgggtttgtgttatatgggt 73049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 396 - 567
Target Start/End: Original strand, 24161 - 24326
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||||||||| |||||||  ||||||||| ||||| |  |||  |||||||||||| ||||| ||||||||||||||||||||||  |||||    
T  24161 aggctaaattacctttttggtcctct--aactatttagttggtatt-gaa--ttggtcctctaactaaaaattgatttatttcgatcctctaa--gtttc 24253  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  24254 tcaccgttattacatttagtcatttctgttagtttttttcaaataaacgttagggtttgtgttatgtgggtcc 24326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 446 - 559
Target Start/End: Complemental strand, 24568 - 24456
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||| | ||||||||  ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  24568 gattggtcctctaactaaaaattgatttattttggtcctctaa--gtttctcactgttactacatttagtcatttctgttaattttattcaaataaacgt 24471  T
Q  545 tagggtttgagttat 559  Q
    ||||||||| |||||    
T  24470 tagggtttgtgttat 24456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 50927 - 50762
Alignment:
Q  397 ggctaaattaccttttttgtcctctctaactattt-aattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||||||||| ||||| |||||||  |||||||| ||||||| |||||   ||| |||||||| ||||| ||||||||||||| || |||||  |||||    
T  50927 ggctaaattacatttttggtcctct--aactattttaattggtatcaga---ttgatcctctaactaaaaattgatttatttcggtcttctaa--gtttc 50835  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  50834 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 50762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 50520 - 50638
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| |||| |||  |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  50520 gattggtcctctaactaaaaattgatttatttcggtcctttaa--gtttctcaccgttactacatttagtcctttctgttatttttattcaaataaacgt 50617  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| |||||||||||    
T  50618 tagggtttgtgttatgtgggt 50638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 88; Significance: 5e-42; HSPs: 2)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 395 - 565
Target Start/End: Original strand, 14133 - 14297
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||||| |||||||| ||| |||||||  ||||||||||||||| |||||   |||||||||||| ||||| ||||||||||||| |||| |||  ||||    
T  14133 aaggcttaattacctgtttggtcctct--aactatttaattggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctttaa--gttt 14225  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  14226 ctcaccgttactacatttagtcctttctgttagttttattcaaataaacgttagagtttgtgttatgtgggt 14297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 14586 - 14421
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttc 494  Q
    |||||||||||||||||| |||  ||||||||||||||||| | ||    ||||| |||||||| | ||||||||||||||||| ||||||  | |||||    
T  14586 aggctaaattacctttttggtc--ctctaactatttaattgatatc---ggattgatcctctaactaaaaattgatttatttcggtcctct--atgtttc 14494  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  14493 tcaccgttactacatttagtcctttctgttagttttattcaaataaacgttagagtttgtgttatctgggtcc 14421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 395 - 567
Target Start/End: Original strand, 21510 - 21675
Alignment:
Q  395 aaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagttt 493  Q
    |||||| |||||||||||| |||||||  ||||||||||||||| |||||   || ||||||||| ||||| ||||||||||||| ||||||||  ||||    
T  21510 aaggcttaattacctttttggtcctct--aactatttaattggtatcaga---ttagtcctctaactaaaaattgatttatttcggtcctctaa--gttt 21602  T
Q  494 ctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| |||||| |||| |||||||||||||    
T  21603 ctcaccgttactacatttagtcctttttgttagttttattcaaataaa-gttaggttttgtgttatgtgggtcc 21675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 396 - 553
Target Start/End: Complemental strand, 22604 - 22453
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||| |||||||||||| |||||||  ||||||||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||||  |||||    
T  22604 aggcttaattacctttttggtcctct--aactatttaattggtatcgga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttc 22512  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttg 553  Q
    ||||  ||||||||||||||| |||||||||||||||||||||||||||| | ||||||    
T  22511 tcactattactacatttagtcctttctgttagttttattcaaataaacgtcaaggtttg 22453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 82; Significance: 2e-38; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 446 - 565
Target Start/End: Complemental strand, 56542 - 56424
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||| ||||| ||||| ||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56542 gattggtcatctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 56445  T
Q  545 tagggtttgagttatgtgggt 565  Q
    |||||||||  ||||||||||    
T  56444 tagggtttgttttatgtgggt 56424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 446 - 565
Target Start/End: Complemental strand, 63667 - 63549
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||| ||||| ||||| ||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  63667 gattggtcatctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 63570  T
Q  545 tagggtttgagttatgtgggt 565  Q
    |||||||||  ||||||||||    
T  63569 tagggtttgttttatgtgggt 63549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 396 - 567
Target Start/End: Original strand, 45755 - 45920
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||||||||||  |||| |||||||  || |||||||||||| || ||   || ||||||||| ||||| ||||||||||||| ||||||||  |||||    
T  45755 aggctaaattactattttggtcctct--aattatttaattggtatcgga---ttagtcctctaactaaaaattgatttatttcggtcctctaa--gtttc 45847  T
Q  495 tcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  45848 tcacggttactacatttagtcctttctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 45920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 81; Significance: 7e-38; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 392 - 567
Target Start/End: Original strand, 19703 - 19872
Alignment:
Q  392 aaaaaggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaag 490  Q
    ||||||| |||||||||||||| |||||||  ||||||||| ||||| |  ||   || ||||||||| ||||| ||||||||||||| ||||||||  |    
T  19703 aaaaaggttaaattacctttttggtcctct--aactatttagttggtattgga---ttagtcctctaactaaaaattgatttatttcggtcctctaa--g 19795  T
Q  491 tttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  19796 tttcttaccgttactacatttagtcatttctgttagttttattcaaataaacgttagagtttgtattatgtgggtcc 19872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 446 - 565
Target Start/End: Complemental strand, 20114 - 19996
Alignment:
Q  446 gattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| | ||||||||||  |||   ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20114 gattggtcctctaactaaaaattgattattttttgtcctct--aagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 20017  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| ||||| |||||    
T  20016 tagggtttgtgttatatgggt 19996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 81; Significance: 7e-38; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 445 - 567
Target Start/End: Original strand, 349116 - 349237
Alignment:
Q  445 agattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacg 543  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  349116 agattagtcctctaactaaaaattgatttatttcgatcctctaa--gtttctcaccgtttttacatttagtcatttctgttagttttattcaaataaacg 349213  T
Q  544 ttagggtttgagttatgtgggtcc 567  Q
    |||| ||||| |||||||||||||    
T  349214 ttagagtttgcgttatgtgggtcc 349237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 445 - 565
Target Start/End: Complemental strand, 113773 - 113654
Alignment:
Q  445 agattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacg 543  Q
    ||||||||||| ||| ||||| ||||||| ||||| || ||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  113773 agattggtcctgtaactaaaaattgatttctttcggtcatctaaa--tttctcactgttactacatttagtcatttctgttagttttattcaaataaacg 113676  T
Q  544 ttagggtttgagttatgtgggt 565  Q
    ||| |||| | |||||||||||    
T  113675 ttaaggttagtgttatgtgggt 113654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 422 - 565
Target Start/End: Complemental strand, 349499 - 349361
Alignment:
Q  422 ctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttc 520  Q
    ||||||||||| ||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||    |||||||  ||||||||||||||| ||||    
T  349499 ctaactatttagttggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaag---ttctcacttttactacatttagtcctttc 349406  T
Q  521 tgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||| ||||||||||||||| ||||||||||| |||||||||||    
T  349405 tgttaattttattcaaataaatgttagggtttgtgttatgtgggt 349361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 532
Target Start/End: Original strand, 113392 - 113522
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttc 494  Q
    ||||||||| || ||||| |||||||  |||| |||||||||| || ||   |||||||||||| ||||| ||||||||||||| ||||||  ||||||     
T  113392 aggctaaataacatttttggtcctct--aactgtttaattggtatccga---ttggtcctctaactaaaaattgatttatttcggtcctct--aagtttt 113484  T
Q  495 tcaccgttactacatttagtcatttctgttagttttat 532  Q
    ||| ||||| || ||||| || |||| |||||||||||    
T  113485 tcatcgttagtaaatttattcctttccgttagttttat 113522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 420 - 567
Target Start/End: Original strand, 18294 - 18437
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    |||||||||||||||||||   |  ||||||||||||||| | ||||||||||||||| | || |||  ||||||||||||| |||||||||||||| ||    
T  18294 ctctaactatttaattggt---attagattggtcctctaactaaaaattgatttatttaggtcttct--aagtttctcaccgctactacatttagtcctt 18388  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18389 tctgttagttttattcaaataaacgttagggtttgtgttatgtgggtcc 18437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 565
Target Start/End: Complemental strand, 18679 - 18561
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||| | ||||||||  |||| |||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  18679 gattggtcctctaactaaaaattgatttattttggtcctctaa--gtttttcactgttactacatttagtcttttctgttagttttattcaaataaacgt 18582  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| |||||||||||    
T  18581 tagggtttgtgttatgtgggt 18561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 78; Significance: 5e-36; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 420 - 553
Target Start/End: Original strand, 81879 - 82008
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||| ||||| |||||   |||||||||||| ||||| ||||||||||||| ||||||||  ||||||||| |||||||||||||||| ||    
T  81879 ctctaactatttatttggtatcaga---ttggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcactgttactacatttagtcctt 81973  T
Q  519 tctgttagttttattcaaataaacgttagggtttg 553  Q
    |||||||||||||||||||||||||||||||||||    
T  81974 tctgttagttttattcaaataaacgttagggtttg 82008  T

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Target: scaffold0032; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 488 - 567
Target Start/End: Complemental strand, 82223 - 82144
Alignment:
Q  488 aagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  82223 aagtttctcaccgttactacatttagtcctttctgttagttttattcaaataaacgttagagtttgtgttatgtgggtcc 82144  T

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Target: scaffold0032; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 509
Target Start/End: Complemental strand, 90844 - 90782
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacat 509  Q
    |||| ||||||||| ||||| ||||||||||||| ||||||||  ||||||||||||||||||||    
T  90844 gattagtcctctaactaaaaattgatttatttcggtcctctaa--gtttctcaccgttactacat 90782  T

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Target: scaffold0246 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 447 - 565
Target Start/End: Complemental strand, 6399 - 6283
Alignment:
Q  447 attggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgtt 545  Q
    ||||||||||||| ||||| |||||| |||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6399 attggtcctctaactaaaaattgatt-atttcggtcctctaa--gtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgtt 6303  T
Q  546 agggtttgagttatgtgggt 565  Q
    || ||||| |||||||||||    
T  6302 agagtttgtgttatgtgggt 6283  T

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Target: scaffold0246; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 448 - 563
Target Start/End: Original strand, 6044 - 6158
Alignment:
Q  448 ttggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgtta 546  Q
    |||||||||||| ||||| ||||||||||||| || |||||  ||||||||  ||||||| ||||||||||||||||||||||||||||||||||| |||    
T  6044 ttggtcctctaactaaaaattgatttatttcggtcttctaa--gtttctcattgttactatatttagtcatttctgttagttttattcaaataaacatta 6141  T
Q  547 gggtttgagttatgtgg 563  Q
    | ||||| |||||||||    
T  6142 gagtttgtgttatgtgg 6158  T

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Target: scaffold0220 (Bit Score: 76; Significance: 7e-35; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 446 - 567
Target Start/End: Original strand, 20795 - 20915
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||  ||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  20795 gattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttcacactgttactacatttagtcctttctgttagttttattcaaataaacgt 20892  T
Q  545 tagggtttgagttatgtgggtcc 567  Q
    ||| ||||| |||||||||||||    
T  20893 tagagtttgtgttatgtgggtcc 20915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 517 - 565
Target Start/End: Complemental strand, 21086 - 21038
Alignment:
Q  517 tttctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||| ||||||||||||||||||||||| ||||||| ||||| |||||    
T  21086 tttctattagttttattcaaataaacgttcgggtttgtgttatatgggt 21038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 420 - 565
Target Start/End: Complemental strand, 8857 - 8716
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaa-ttaaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| ||    |||||||||||||| | |||||||||||||||  ||  |||  |||||||||||||||||||||||||||| ||    
T  8857 ctctaactatttaattggtatc---ggattggtcctctaactaaaaattgatttattt--atgttctctaagtttctcaccgttactacatttagtcttt 8763  T
Q  519 tctgttagttttattcaaataaacgttagggtttgagttatgtgggt 565  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  8762 tctgttagttttattcaaataaacgttagggtttgtgttatgcgggt 8716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 396 - 567
Target Start/End: Original strand, 8428 - 8592
Alignment:
Q  396 aggctaaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaattaaaattgatttatttcgatcctctaaaagtttct 495  Q
    |||||||||||||||||| |||||||  ||||||||||||||| |||||   ||| || |  | | |||||||||||||||||||||| |||  ||||||    
T  8428 aggctaaattacctttttggtcctct--aactatttaattggtatcaga---ttgatctttaactaaaaattgatttatttcgatcctttaa--gtttct 8520  T
Q  496 caccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
    ||| ||||| | |||||||  |||||||||||||||||||||||||||||  |||||| |||||||||||||    
T  8521 cactgttacaatatttagtattttctgttagttttattcaaataaacgttgaggtttgtgttatgtgggtcc 8592  T

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Target: scaffold0260 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 462 - 562
Target Start/End: Original strand, 14252 - 14350
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgt 561  Q
    ||||||||||||||||| ||||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  14252 aaaattgatttatttcggtcctctaa--gtttctcaccgttgctatatttagtcatttctgttagttttattcaaataaacgttagagtttgtgttatgt 14349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 66; Significance: 7e-29; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 446 - 565
Target Start/End: Complemental strand, 15854 - 15736
Alignment:
Q  446 gattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgt 544  Q
    |||||||| ||||| ||||| ||||||||||||| ||||||||  |||||||||| | |||||||||| ||  |||||||||||||||||||||||||||    
T  15854 gattggtcatctaactaaaaattgatttatttcggtcctctaa--gtttctcaccatgactacatttaatcccttctgttagttttattcaaataaacgt 15757  T
Q  545 tagggtttgagttatgtgggt 565  Q
    ||||||||| |||||||||||    
T  15756 tagggtttgtgttatgtgggt 15736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 400 - 567
Target Start/End: Original strand, 15456 - 15612
Alignment:
Q  400 taaattaccttttttgtcctctctaactatttaattggtgtcagaagattggtcctctaatt-aaaattgatttatttcgatcctctaaaagtttctcac 498  Q
    ||||||||||||||| ||  ||||||||||| ||||||| ||    ||||| |||||||||| ||||||||||||||| | || | |  |||||||||||    
T  15456 taaattaccttttttatc--ctctaactattcaattggtatc---ggattgatcctctaattaaaaattgatttattttggtcattt--aagtttctcac 15548  T
Q  499 cgttactacatttagtcatttctgttagttttattcaaataaacgttagggtttgagttatgtgggtcc 567  Q
     ||||||||||||||||||||||||||     ||||||||||| ||| | ||||| |||||||||||||    
T  15549 tgttactacatttagtcatttctgtta-----attcaaataaatgtttgagtttgtgttatgtgggtcc 15612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 44; Significance: 9e-16; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 462 - 548
Target Start/End: Complemental strand, 147229 - 147145
Alignment:
Q  462 aaaattgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagg 548  Q
    ||||||||||||||||| |||  |||  |||||||| |||||||| ||||||||||||| |||| |||||||| |||||||||||||    
T  147229 aaaattgatttatttcggtccgttaa--gtttctcatcgttactatatttagtcatttccgttaattttattcgaataaacgttagg 147145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 420 - 550
Target Start/End: Original strand, 144041 - 144166
Alignment:
Q  420 ctctaactatttaattggtgtcagaagattggtcctctaattaaaa-ttgatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatt 518  Q
    ||||||||||||||||||| ||| |   ||||| |||||| ||||| ||||||||||||| |||  ||||  ||||||||||||||||| ||||||| ||    
T  144041 ctctaactatttaattggtatcata---ttggttctctaactaaaaattgatttatttcggtcccttaaa--tttctcaccgttactacttttagtcttt 144135  T
Q  519 tctgttagttttattcaaataaacgttagggt 550  Q
    ||  || |||||||| ||| ||||||||||||    
T  144136 tccattggttttatt-aaaaaaacgttagggt 144166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 452 - 553
Target Start/End: Original strand, 9832 - 9931
Alignment:
Q  452 tcctctaattaaaatt-gatttatttcgatcctctaaaagtttctcaccgttactacatttagtcatttctgttagttttattcaaataaacgttagggt 550  Q
    |||||||| ||||||| ||||||||| | |||| |||  ||||||  |||||||||| ||||||| |||| |||||||||||| ||| ||||||||||||    
T  9832 tcctctaactaaaatttgatttattttggtcctttaa--gtttctatccgttactacttttagtcctttccgttagttttatt-aaaaaaacgttagggt 9928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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