View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13021_low_12 (Length: 364)
Name: NF13021_low_12
Description: NF13021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13021_low_12 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 10 - 364
Target Start/End: Original strand, 41209836 - 41210190
Alignment:
| Q |
10 |
attattctatgcatggaagttggggcaataattacattctgtctaccacttttacgatgtataaaaataatcgagacatttttggtacttatattaattt |
109 |
Q |
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| T |
41209836 |
attattctatgtatggaagttggggcaataattacattctgtctaccacttttacgatgtataaaaataatcgagacatttttggtacttatattaattt |
41209935 |
T |
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| Q |
110 |
tgtgacatcaactctagaattattttggtggcaattactgtgacttactcgtattgttcatccataataataaaggatcataatttacgtattcggctca |
209 |
Q |
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| T |
41209936 |
tgtgacatcaactctagaattattttggtggcaattactgtgacttattcatattgtccatccataataataaaggatcataatttacgtattcggctga |
41210035 |
T |
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| Q |
210 |
caattcatgtctgtttttacaaacctgacataggaatgcccaaggtaattaaccagacaaagtctgaagagcaagtaatataatactccgtatagtaaac |
309 |
Q |
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| T |
41210036 |
caattcatgtctgtttttacaaacctgacataggaatgcccgaggtaattaaccagacaaagtctgaagagcaagtaatataatactccgtatagtaaac |
41210135 |
T |
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| Q |
310 |
cataatacagagtttttgaaattttgggcatagagatgtggagtaataaaggcaa |
364 |
Q |
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| T |
41210136 |
cataatacagagtatttgaaattttgggcatagagatgtggagtaataaaggcaa |
41210190 |
T |
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