View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13021_low_21 (Length: 252)
Name: NF13021_low_21
Description: NF13021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13021_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 31705030 - 31705169
Alignment:
| Q |
1 |
cttatcaaaataacaatcttcataattctctaaagctaacagtggggttggtttactttattgatccaagtagctagacattgttcaccaacttttgtag |
100 |
Q |
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| T |
31705030 |
cttatcaaaataacaatcttcataattctctaaagctaacagtggggttggtttactttattgatccaagtagctagacattgttcatcaacttttgtag |
31705129 |
T |
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| Q |
101 |
atggtatgcatgtaaatttataagatttaagttttaaatt |
140 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
31705130 |
atggtatgcatgtaaatttataagatttaagttttaaatt |
31705169 |
T |
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