View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13022_low_24 (Length: 324)
Name: NF13022_low_24
Description: NF13022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13022_low_24 |
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Alignment Details
Target: chr2 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 12 - 308
Target Start/End: Complemental strand, 4103184 - 4102888
Alignment:
| Q |
12 |
ttctatgatgttaactatgaaaagtacaatccaacaatgtatggtgattcatctagaggagtgaacaacaataataactggtacaacaataataataact |
111 |
Q |
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| T |
4103184 |
ttctatgatgttaactatgaaaagtacaatccaacaatgtatggtgattcatctagaggagtgaacaacaataataactggtacaacaataataataact |
4103085 |
T |
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| Q |
112 |
atggtaacaacaatgagtaccagaataaccatggcaactacaatggttacaagaaccaagaggagttgaaaaatgaacaacatgagtttgatgttgaacc |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4103084 |
atggtaacaacaatgagtaccagaataaccatggcaactacaatggttacaagaaccaagaggagttgaaaaatgaacaacatgagtttgatgttgaacc |
4102985 |
T |
|
| Q |
212 |
ataagaatttggttttatatcattagcaaagtgaagaattcgctttacttttgaagtgttctctgtgtgagtgtgttctatgtttcaatgtgctttg |
308 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4102984 |
ataagaatttgattttatatcattagcaaagtgaagaattcgctttacttttgaagtgttctctgtgtgagtgtgttctatgtttcaatgtgctttg |
4102888 |
T |
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