View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13024_low_14 (Length: 236)
Name: NF13024_low_14
Description: NF13024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13024_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 46355708 - 46355925
Alignment:
| Q |
1 |
aagaacaaactggtaaactgatttctaatgaaactaattttaaaggtttctagtcttcaaatccttgtccannnnnnnngtttcttttgcggcatcgtnn |
100 |
Q |
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| T |
46355708 |
aagaacaaactggtaaactgatttctaatgaaactaattttaaaggtttctagtcttcaaatccttgtccgttttttttgtttcttttgcggcatcgtaa |
46355807 |
T |
|
| Q |
101 |
nnnnnttgcatggatccaatgtgtagaacgagggaatcacacacattatttacaccaaatatacaaggtattggtttactggtccataaacttgaagaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46355808 |
aaaaattgcatggatccaatgtgtagaacgagggaatcacacacattatttacaccaaatatacaaggtattggtttactggtccataaacttgaagaat |
46355907 |
T |
|
| Q |
201 |
aattcaggtgtgcatatt |
218 |
Q |
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|||||||||||||||||| |
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| T |
46355908 |
aattcaggtgtgcatatt |
46355925 |
T |
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