View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13028_low_1 (Length: 894)

Name: NF13028_low_1
Description: NF13028
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13028_low_1
NF13028_low_1
[»] chr4 (37 HSPs)
chr4 (1-884)||(27724909-27725788)
chr4 (1-107)||(27737379-27737485)
chr4 (437-547)||(53315357-53315467)
chr4 (439-559)||(2996592-2996712)
chr4 (475-547)||(6987708-6987780)
chr4 (438-547)||(27123282-27123391)
chr4 (437-521)||(6428075-6428159)
chr4 (475-547)||(11264332-11264404)
chr4 (441-510)||(18628486-18628555)
chr4 (471-528)||(52419581-52419638)
chr4 (439-559)||(21157787-21157907)
chr4 (489-545)||(28749888-28749944)
chr4 (491-550)||(2874607-2874666)
chr4 (439-526)||(3549486-3549573)
chr4 (443-558)||(56007699-56007814)
chr4 (441-519)||(8328052-8328130)
chr4 (475-521)||(19429479-19429525)
chr4 (437-515)||(24370880-24370958)
chr4 (438-520)||(25896842-25896924)
chr4 (437-547)||(45128239-45128349)
chr4 (439-521)||(46187840-46187922)
chr4 (438-559)||(14011253-14011374)
chr4 (475-552)||(28406938-28407015)
chr4 (475-532)||(41097223-41097280)
chr4 (440-520)||(4691906-4691986)
chr4 (481-521)||(21953005-21953045)
chr4 (437-521)||(33534098-33534182)
chr4 (440-560)||(47970314-47970434)
chr4 (427-531)||(54277242-54277346)
chr4 (440-531)||(7063539-7063630)
chr4 (426-521)||(7730657-7730751)
chr4 (439-518)||(25717653-25717732)
chr4 (439-546)||(29375935-29376042)
chr4 (437-495)||(2811554-2811612)
chr4 (440-518)||(25583652-25583730)
chr4 (427-521)||(32071925-32072014)
chr4 (440-521)||(51560221-51560302)
[»] chr6 (34 HSPs)
chr6 (437-559)||(2455829-2455951)
chr6 (440-547)||(8420129-8420236)
chr6 (439-559)||(9833042-9833161)
chr6 (440-518)||(733109-733187)
chr6 (438-547)||(2460081-2460190)
chr6 (437-521)||(32917254-32917338)
chr6 (478-521)||(9027635-9027678)
chr6 (462-541)||(27595521-27595600)
chr6 (437-514)||(30865547-30865624)
chr6 (437-521)||(31338033-31338118)
chr6 (475-547)||(32171350-32171422)
chr6 (484-547)||(725631-725694)
chr6 (427-521)||(8348283-8348377)
chr6 (475-541)||(27693406-27693472)
chr6 (449-531)||(34538159-34538241)
chr6 (475-524)||(2027765-2027814)
chr6 (492-545)||(27615257-27615310)
chr6 (440-521)||(27857415-27857496)
chr6 (440-521)||(32848528-32848609)
chr6 (479-559)||(32577957-32578037)
chr6 (597-629)||(32980491-32980523)
chr6 (442-522)||(33385585-33385665)
chr6 (479-559)||(34939532-34939612)
chr6 (496-547)||(9667973-9668024)
chr6 (440-547)||(32171498-32171605)
chr6 (440-559)||(33887849-33887968)
chr6 (437-515)||(3180998-3181076)
chr6 (477-547)||(29957891-29957961)
chr6 (597-630)||(2514651-2514684)
chr6 (475-524)||(9202957-9203006)
chr6 (473-546)||(20368145-20368218)
chr6 (589-626)||(27595647-27595684)
chr6 (480-517)||(31594356-31594393)
chr6 (481-518)||(34404600-34404637)
[»] chr2 (43 HSPs)
chr2 (438-511)||(3973609-3973682)
chr2 (437-521)||(28803459-28803543)
chr2 (436-553)||(43985234-43985351)
chr2 (462-562)||(1741986-1742086)
chr2 (438-544)||(43456637-43456743)
chr2 (439-524)||(4350744-4350829)
chr2 (475-559)||(25661126-25661210)
chr2 (475-559)||(34652003-34652087)
chr2 (495-559)||(36852491-36852555)
chr2 (477-532)||(11344739-11344794)
chr2 (427-546)||(18884899-18885018)
chr2 (437-512)||(22878164-22878239)
chr2 (426-521)||(30552561-30552656)
chr2 (476-529)||(4550796-4550849)
chr2 (489-546)||(10285892-10285949)
chr2 (427-512)||(14277812-14277897)
chr2 (477-529)||(1494415-1494467)
chr2 (427-531)||(32821856-32821960)
chr2 (437-531)||(9478346-9478440)
chr2 (473-515)||(43808621-43808663)
chr2 (468-521)||(12785920-12785973)
chr2 (440-529)||(17221472-17221561)
chr2 (442-518)||(1318296-1318371)
chr2 (440-531)||(787379-787470)
chr2 (438-521)||(5759505-5759587)
chr2 (440-519)||(29430817-29430896)
chr2 (444-499)||(34927042-34927097)
chr2 (438-500)||(6988197-6988259)
chr2 (487-521)||(9878661-9878695)
chr2 (489-531)||(12215854-12215896)
chr2 (438-488)||(17775396-17775446)
chr2 (438-559)||(43141890-43142012)
chr2 (437-531)||(43529787-43529881)
chr2 (479-520)||(1830103-1830144)
chr2 (502-547)||(1939326-1939371)
chr2 (437-522)||(9996794-9996879)
chr2 (462-499)||(10190345-10190382)
chr2 (441-514)||(13866942-13867015)
chr2 (478-515)||(15120246-15120283)
chr2 (589-630)||(25609745-25609786)
chr2 (439-512)||(25609862-25609935)
chr2 (486-531)||(43065428-43065473)
chr2 (482-547)||(43205340-43205405)
[»] chr5 (33 HSPs)
chr5 (437-553)||(11297125-11297241)
chr5 (437-545)||(29590559-29590666)
chr5 (437-521)||(14980566-14980650)
chr5 (440-531)||(32172700-32172791)
chr5 (440-559)||(37611147-37611266)
chr5 (440-559)||(37787877-37787996)
chr5 (437-558)||(11457119-11457239)
chr5 (476-521)||(38047847-38047892)
chr5 (439-559)||(36639541-36639661)
chr5 (479-547)||(41052899-41052967)
chr5 (438-521)||(35960470-35960552)
chr5 (437-515)||(499660-499738)
chr5 (441-547)||(35095720-35095825)
chr5 (440-521)||(11095427-11095508)
chr5 (439-524)||(25720348-25720433)
chr5 (437-521)||(16016355-16016439)
chr5 (477-521)||(16944944-16944988)
chr5 (439-531)||(34117479-34117570)
chr5 (439-523)||(39257325-39257409)
chr5 (462-521)||(10152391-10152450)
chr5 (486-545)||(11700356-11700415)
chr5 (437-520)||(12459930-12460013)
chr5 (486-521)||(40499704-40499739)
chr5 (438-508)||(12407660-12407730)
chr5 (484-558)||(13604825-13604899)
chr5 (477-531)||(28586735-28586789)
chr5 (439-521)||(40534256-40534338)
chr5 (439-521)||(42646948-42647029)
chr5 (440-501)||(7550450-7550511)
chr5 (481-514)||(12242683-12242716)
chr5 (442-531)||(29336677-29336766)
chr5 (437-502)||(37968953-37969018)
chr5 (427-496)||(38028618-38028687)
[»] chr8 (36 HSPs)
chr8 (477-559)||(31875564-31875646)
chr8 (437-543)||(12361227-12361335)
chr8 (478-529)||(30987961-30988012)
chr8 (439-531)||(43709309-43709403)
chr8 (478-547)||(8558691-8558760)
chr8 (439-515)||(30191072-30191148)
chr8 (477-531)||(4055585-4055639)
chr8 (437-547)||(4560533-4560643)
chr8 (442-519)||(21130671-21130748)
chr8 (475-531)||(14949913-14949969)
chr8 (442-500)||(24326109-24326167)
chr8 (473-547)||(27645935-27646009)
chr8 (428-545)||(4511061-4511178)
chr8 (437-521)||(5069754-5069836)
chr8 (478-531)||(6509273-6509326)
chr8 (438-531)||(9700048-9700141)
chr8 (474-515)||(37461205-37461246)
chr8 (437-518)||(39551138-39551219)
chr8 (437-517)||(7008660-7008739)
chr8 (475-559)||(7918413-7918497)
chr8 (437-493)||(11059658-11059714)
chr8 (437-521)||(40071806-40071890)
chr8 (437-488)||(3634613-3634664)
chr8 (446-521)||(11569395-11569470)
chr8 (437-532)||(43368629-43368724)
chr8 (437-547)||(6950353-6950463)
chr8 (479-521)||(9540967-9541009)
chr8 (475-521)||(9572927-9572973)
chr8 (440-510)||(18931230-18931300)
chr8 (486-544)||(37740405-37740462)
chr8 (597-630)||(1470944-1470977)
chr8 (589-630)||(4558747-4558788)
chr8 (439-547)||(11183576-11183682)
chr8 (443-512)||(25881350-25881419)
chr8 (485-530)||(29168642-29168687)
chr8 (492-541)||(29262858-29262907)
[»] chr7 (40 HSPs)
chr7 (437-559)||(27626052-27626174)
chr7 (437-546)||(48157049-48157158)
chr7 (439-531)||(36598287-36598379)
chr7 (437-531)||(1418468-1418560)
chr7 (437-516)||(39542229-39542308)
chr7 (439-521)||(33894684-33894766)
chr7 (475-553)||(44808183-44808261)
chr7 (440-524)||(8427067-8427151)
chr7 (437-521)||(23214912-23214996)
chr7 (440-519)||(30748966-30749045)
chr7 (443-542)||(45078314-45078413)
chr7 (486-528)||(5269536-5269578)
chr7 (437-547)||(12234818-12234928)
chr7 (449-547)||(22387837-22387935)
chr7 (437-515)||(25670515-25670593)
chr7 (438-531)||(30751566-30751659)
chr7 (438-521)||(24048599-24048680)
chr7 (437-513)||(31341200-31341276)
chr7 (487-559)||(36370688-36370760)
chr7 (437-521)||(39551477-39551561)
chr7 (480-528)||(47427275-47427323)
chr7 (481-544)||(3500940-3501003)
chr7 (444-547)||(28165122-28165225)
chr7 (491-550)||(29290361-29290420)
chr7 (437-512)||(34754739-34754814)
chr7 (487-522)||(44989908-44989943)
chr7 (439-513)||(3836614-3836688)
chr7 (441-547)||(27121527-27121632)
chr7 (479-521)||(36537965-36538007)
chr7 (475-521)||(39360080-39360126)
chr7 (588-630)||(49060489-49060531)
chr7 (497-558)||(2013214-2013275)
chr7 (440-517)||(2727290-2727367)
chr7 (462-531)||(12834916-12834985)
chr7 (439-524)||(20547321-20547406)
chr7 (475-524)||(25422380-25422429)
chr7 (484-521)||(33645937-33645974)
chr7 (492-521)||(39568308-39568337)
chr7 (437-559)||(44151405-44151531)
chr7 (487-532)||(44686976-44687021)
[»] chr3 (37 HSPs)
chr3 (475-559)||(37273153-37273237)
chr3 (427-542)||(52323813-52323928)
chr3 (438-524)||(21872225-21872311)
chr3 (437-529)||(25182919-25183008)
chr3 (450-547)||(20192548-20192645)
chr3 (439-500)||(22667481-22667542)
chr3 (439-500)||(22724120-22724181)
chr3 (481-562)||(49465909-49465990)
chr3 (439-531)||(24624257-24624349)
chr3 (441-559)||(33965421-33965540)
chr3 (442-500)||(11041160-11041218)
chr3 (438-508)||(50211805-50211875)
chr3 (426-531)||(36646300-36646405)
chr3 (440-521)||(41724269-41724350)
chr3 (437-516)||(11039707-11039786)
chr3 (428-521)||(24281104-24281197)
chr3 (437-514)||(40880877-40880954)
chr3 (475-519)||(1810036-1810080)
chr3 (439-507)||(24158447-24158515)
chr3 (440-512)||(27792938-27793010)
chr3 (437-521)||(36200153-36200237)
chr3 (441-521)||(37155058-37155138)
chr3 (441-521)||(37200413-37200493)
chr3 (444-515)||(50004715-50004787)
chr3 (476-515)||(2606278-2606317)
chr3 (440-515)||(10540425-10540500)
chr3 (478-521)||(14598523-14598566)
chr3 (478-521)||(42817192-42817235)
chr3 (475-521)||(11039306-11039352)
chr3 (475-521)||(21574547-21574593)
chr3 (437-547)||(26603224-26603334)
chr3 (479-521)||(31403075-31403117)
chr3 (475-521)||(49772635-49772681)
chr3 (589-630)||(1395620-1395661)
chr3 (439-496)||(25699129-25699186)
chr3 (450-547)||(43115087-43115184)
chr3 (449-518)||(53735913-53735982)
[»] chr1 (45 HSPs)
chr1 (439-529)||(1662622-1662712)
chr1 (437-547)||(30259415-30259525)
chr1 (437-546)||(5591896-5592004)
chr1 (437-518)||(23373242-23373323)
chr1 (439-531)||(15581301-15581393)
chr1 (439-522)||(4549472-4549555)
chr1 (476-519)||(38867799-38867842)
chr1 (447-521)||(44422756-44422830)
chr1 (481-530)||(11560535-11560584)
chr1 (437-545)||(3597210-3597318)
chr1 (441-521)||(32515374-32515454)
chr1 (437-520)||(4033946-4034029)
chr1 (474-521)||(15579539-15579586)
chr1 (437-496)||(27807197-27807256)
chr1 (439-562)||(31517671-31517794)
chr1 (437-559)||(12564428-12564550)
chr1 (437-515)||(28467496-28467574)
chr1 (439-521)||(43420315-43420397)
chr1 (440-529)||(14737658-14737747)
chr1 (485-526)||(17631079-17631120)
chr1 (475-520)||(23407489-23407534)
chr1 (440-513)||(26679419-26679492)
chr1 (437-550)||(29723517-29723630)
chr1 (453-558)||(44031944-44032049)
chr1 (438-531)||(45327627-45327720)
chr1 (475-520)||(49692019-49692064)
chr1 (437-521)||(10199337-10199421)
chr1 (438-531)||(17628646-17628735)
chr1 (437-521)||(27140535-27140619)
chr1 (437-513)||(51929391-51929467)
chr1 (440-547)||(4868431-4868537)
chr1 (437-500)||(6279477-6279540)
chr1 (484-547)||(15515572-15515635)
chr1 (437-524)||(16980857-16980944)
chr1 (427-466)||(33204313-33204352)
chr1 (437-520)||(34536216-34536299)
chr1 (478-521)||(37941955-37941998)
chr1 (589-628)||(45234148-45234187)
chr1 (479-522)||(49521776-49521819)
chr1 (437-559)||(37593613-37593735)
chr1 (477-543)||(37811887-37811953)
chr1 (437-510)||(5157140-5157213)
chr1 (424-469)||(6292601-6292646)
chr1 (486-531)||(27145589-27145634)
chr1 (589-630)||(50319241-50319282)
[»] scaffold0024 (1 HSPs)
scaffold0024 (443-514)||(27640-27711)
[»] scaffold0110 (1 HSPs)
scaffold0110 (439-509)||(4154-4224)
[»] scaffold0311 (1 HSPs)
scaffold0311 (450-555)||(10559-10664)
[»] scaffold0012 (1 HSPs)
scaffold0012 (492-521)||(38649-38678)


Alignment Details
Target: chr4 (Bit Score: 684; Significance: 0; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 684; E-Value: 0
Query Start/End: Original strand, 1 - 884
Target Start/End: Complemental strand, 27725788 - 27724909
Alignment:
Q  1 acaaggcagtgaatatgaaacaaaattgaattcttattaatattttatttgcgttttagatgtaaaaactaaatgaactgacaaaatgtttgtctgtcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27725788 acaaggcagtgaatatgaaacaaaattgaattcttataaatattttatttgtgttttagatgtaaaaactaaatgaactgacaaaatgtttgtctgtcaa 27725689  T
Q  101 aaacaaagatgaatcttcccaggtattttttgctacnnnnnnnnnnnnnnnnnnnnnnnttgagctcatggactccatcaacttcaccaaccaaatcact 200  Q
    |||||||||||||||||||||||||||||||||||                        |||||||||||||||||||||||||||||||||||||||||    
T  27725688 aaacaaagatgaatcttcccaggtattttttgctaaaaaaaaataaaacaaacaaaaaattgagctcatggactccatcaacttcaccaaccaaatcact 27725589  T
Q  201 actagctcaactcatccacacttcacttggattgcaagcgtcttcacaatatctggacaaccatcattgccaccggtgaaagttgctttgaccattggaa 300  Q
    |   ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27725588 a---gctcaactcatccacacttcacttggattgcaagcgtcttcacaacatctggacaaccatcattgccaccggtgaaagttgctttgaccattggaa 27725492  T
Q  301 ccgaacaagttggttttcctaagcatagctgctcaaattacagtcacacagaacatgttatttatcaccttcatatttgtcacaacatataaaacagaaa 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27725491 ccgaacaagttggttttcctaagcatagctgctcaaattacagtcacacagaacatgttatttatcaccttcatatttgtcacagcatataaaacagaaa 27725392  T
Q  401 atgataaaaataaaagagaaagagtttgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27725391 atgataaaaataaaagagaaagagtttgtttagaccgacttatttgagcttatctactgagataagcacatatacgactgtttgagagagcttatggaaa 27725292  T
Q  501 taacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatagattgtnnnnnnnncttatcgcttttaccaaaaataacttga 600  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| |||||||| ||||||||||||    
T  27725291 taacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatagattgtaaaaaaaacttatcacttttaccgaaaataacttga 27725192  T
Q  601 ctttattttatgttttattatagaaatagcaaacacttatagtactataagtgcttaatcaagccgttaatccaaacatgatcaaagttagtttgctagc 700  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27725191 c-ttattttatgttttattatagaaatagcaaacacttatagtactataagtgcttaatcaagccgttaatccaaacatgaccaaagttagtttgctagc 27725093  T
Q  701 aaagaaacgagagcgctacctgctcaacaatcttcttggaggaaggtgcattacattttcccatagtaaagcttccacagaaacccgaaggatcaccaaa 800  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27725092 aaagaaacgagagctctacctgctcaacaatcttcttggaggaaggtgcattacattttcccataataaagcttccacagaaacccgaaggatcaccaaa 27724993  T
Q  801 gcttgcaaattcaacagccgtaannnnnnnctggtctggacatgtgataaaagcttctggagtcagattctctcccacaggttc 884  Q
    ||||||||| |||||||||||||       |||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  27724992 gcttgcaaactcaacagccgtaatttttttctggtccggacacgtgataaaagcttctggagtcagattctcccccacacgttc 27724909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 27737485 - 27737379
Alignment:
Q  1 acaaggcagtgaatatgaaacaaaattgaattcttattaatattttatttgcgttttagatgtaaaaactaaatgaactgacaaaatgtttgtctgtcaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  27737485 acaaggcagtgaatatgaaacaaaattgaattcttataaattttttatttgtgttttagatgtaaaaactaaatgaactaacaaaatgtttgtttgtcaa 27737386  T
Q  101 aaacaaa 107  Q
    | |||||    
T  27737385 atacaaa 27737379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 437 - 547
Target Start/End: Complemental strand, 53315467 - 53315357
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    |||||||||||||||||| ||||  |||||||||||||||||| |||| ||||||||||| ||| ||| ||| |||||||||||| ||||||| || | |    
T  53315467 gacttatttgagcttatccactggtataagcacatataagactatttgtgagagcttatgaaaacaacatatcacatgtccataagctatttttaactta 53315368  T
Q  537 tttccataagc 547  Q
    ||| |||||||    
T  53315367 ttttcataagc 53315357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 439 - 559
Target Start/End: Complemental strand, 2996712 - 2996592
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatt 538  Q
    ||||||||| ||||| || ||| |||||||| | | |||||||||||||||||||||| ||| |||||||||||||||||||| || ||||||| | |||    
T  2996712 cttatttgaacttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttatt 2996613  T
Q  539 tccataagcacttcaagatag 559  Q
    | |||| || || ||||||||    
T  2996612 ttcatacgctctccaagatag 2996592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 475 - 547
Target Start/End: Original strand, 6987708 - 6987780
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 547  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||| | ||||||||||||    
T  6987708 agactgtttgggagagcttatggatacaacttatgacatgtccataaactattttcaacttatttccataagc 6987780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 438 - 547
Target Start/End: Original strand, 27123282 - 27123391
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgat 537  Q
    ||||||||||||||||  |||   ||||| || | | |||||||||||||||||||||||||| |||||||||||||||  |||  | ||||||| | ||    
T  27123282 acttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttat 27123381  T
Q  538 ttccataagc 547  Q
    ||||||||||    
T  27123382 ttccataagc 27123391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 437 - 521
Target Start/End: Complemental strand, 6428159 - 6428075
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||||||||| || ||  |||||||| | | |||| ||||||||||| ||||| ||| ||||||||||||||||||||    
T  6428159 gacttatttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaacaacttatgacatgtccataa 6428075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 475 - 547
Target Start/End: Complemental strand, 11264404 - 11264332
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 547  Q
    |||||||||| |||||| ||| |||  ||||||||||||||||||||||| ||||||| | ||||||||||||    
T  11264404 agactgtttgggagagcatatagaatcaacttatgacatgtccataaactgttttcaacttatttccataagc 11264332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 441 - 510
Target Start/End: Original strand, 18628486 - 18628555
Alignment:
Q  441 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatga 510  Q
    |||||||||||||||||||| |||| ||| | | |||||||||| ||||||||||| ||| |||||||||    
T  18628486 tatttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaacttatga 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 471 - 528
Target Start/End: Original strand, 52419581 - 52419638
Alignment:
Q  471 tataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattt 528  Q
    ||||||||||||||||||| |||||| ||| ||||||| |||||| ||||||||||||    
T  52419581 tataagactgtttgagagaccttatgaaaacaacttattacatgttcataaactattt 52419638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 439 - 559
Target Start/End: Complemental strand, 21157907 - 21157787
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatt 538  Q
    |||||||||||| ||||||||| |||||||| | ||||||||||||  ||||||||  |||| | |||||||||| | || || || |||| |  | |||    
T  21157907 cttatttgagctcatctactgacataagcacttgtaagactgtttggaagagcttacagaaacagcttatgacatttacaaaagctgtttttagcttatt 21157808  T
Q  539 tccataagcacttcaagatag 559  Q
    ||||||||| ||||| |||||    
T  21157807 tccataagctcttcaggatag 21157787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 28749888 - 28749944
Alignment:
Q  489 agcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataa 545  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| | |||| |||||    
T  28749888 agcttatggaaataacttattacatgtccataaactgttttcaactcattttcataa 28749944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 491 - 550
Target Start/End: Original strand, 2874607 - 2874666
Alignment:
Q  491 cttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcact 550  Q
    |||||||||| |||||||||||||||||||| ||||||||   | |||||||||||||||    
T  2874607 cttatggaaacaacttatgacatgtccataatctattttccgcttatttccataagcact 2874666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 439 - 526
Target Start/End: Original strand, 3549486 - 3549573
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactat 526  Q
    ||||||| || ||||||| ||  |||||||| ||| ||||||||||||||| |||||| |||||   ||||||||||||| |||||||    
T  3549486 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaactat 3549573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 443 - 558
Target Start/End: Complemental strand, 56007814 - 56007699
Alignment:
Q  443 tttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttcca 542  Q
    ||||| |||||||||||  |||| ||| | |||||||||||||||||||| ||  || |||||||||||||||| ||   ||||||| || | ||||| |    
T  56007814 tttgaacttatctactggcataatcacttgtaagactgtttgagagagctaatacaagtaacttatgacatgtcgattgtctattttgaacttatttcta 56007715  T
Q  543 taagcacttcaagata 558  Q
    ||||| || |||||||    
T  56007714 taagctctccaagata 56007699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 441 - 519
Target Start/End: Original strand, 8328052 - 8328130
Alignment:
Q  441 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccat 519  Q
    |||||||||||||||| ||  |||||||| ||| ||||||||||  | |||||||| ||| || |||||||||||||||    
T  8328052 tatttgagcttatctattggcataagcacttatgagactgtttggaatagcttatgaaaacaatttatgacatgtccat 8328130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 475 - 521
Target Start/End: Original strand, 19429479 - 19429525
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||||    
T  19429479 agactgtttgggagagcttatggagaaaacttatgacatgtccataa 19429525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 437 - 515
Target Start/End: Original strand, 24370880 - 24370958
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 515  Q
    |||||||||||||||||||| |   |||||||||| | ||| ||||||| | | |||||||||| ||||||||||||||    
T  24370880 gacttatttgagcttatctattcgcataagcacatgtgagaatgtttgataaaacttatggaaacaacttatgacatgt 24370958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 520
Target Start/End: Complemental strand, 25896924 - 25896842
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 520  Q
    ||||||||||| |||||||||   || ||||| | | |||||||||  |||||||||| |||||| |||||||||||||||||    
T  25896924 acttatttgagtttatctactagcattagcacttgtgagactgtttaggagagcttatagaaatagcttatgacatgtccata 25896842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 437 - 547
Target Start/End: Original strand, 45128239 - 45128349
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    ||||||||||| ||||||||| |  |||| ||||| | | | |||||||||||||||||||||| |||| ||  ||||||||| | || ||||||  | |    
T  45128239 gacttatttgaacttatctaccggcataaccacatgtgatattgtttgagagagcttatggaaacaactgatatcatgtccatgagctgttttcagctta 45128338  T
Q  537 tttccataagc 547  Q
    |||||||||||    
T  45128339 tttccataagc 45128349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 521
Target Start/End: Original strand, 46187840 - 46187922
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||||||||||||||  |||| ||| ||| ||||||||| |||| | ||||||||| || |||||| ||||| ||||    
T  46187840 cttatttgagcttatctactggcataaacacttatgagactgtttaagagggtttatggaaacaatttatgatatgtctataa 46187922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 559
Target Start/End: Complemental strand, 14011374 - 14011253
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgat 537  Q
    |||| ||||| |||||||||| | |||||||||| ||| ||| |||| ||||||||||| ||| |  |||| |||||||  ||| || ||||||  | ||    
T  14011374 acttctttgaacttatctacttacataagcacatgtaaaactatttgggagagcttatgcaaagagtttatcacatgtctttaagctgttttcagcttat 14011275  T
Q  538 ttccataagcacttcaagatag 559  Q
    |||||||||| || ||||||||    
T  14011274 ttccataagctctccaagatag 14011253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 552
Target Start/End: Complemental strand, 28407015 - 28406938
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttc 552  Q
    |||||| ||||||||||||| ||||| |||| ||||||| | |||||||||||| ||  | |||||||||||| ||||    
T  28407015 agactggttgagagagcttacggaaacaactcatgacatattcataaactatttgcagcttatttccataagctcttc 28406938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 532
Target Start/End: Original strand, 41097223 - 41097280
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 532  Q
    |||||||| | |||||||||| |||| |||| ||||||||||||||| ||||||||||    
T  41097223 agactgttcgggagagcttatagaaacaactaatgacatgtccataagctattttcaa 41097280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 440 - 520
Target Start/End: Complemental strand, 4691986 - 4691906
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 520  Q
    ||||||||||||||||||||  | || ||| | | ||||| ||||||| | |||||||||| ||||||||||||| |||||    
T  4691986 ttatttgagcttatctactgtcacaatcacttgtgagactatttgagaaaacttatggaaacaacttatgacatgcccata 4691906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 481 - 521
Target Start/End: Complemental strand, 21953045 - 21953005
Alignment:
Q  481 tttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||| ||||||||||||||| ||||||||||||||||||||    
T  21953045 tttgggagagcttatggaaagaacttatgacatgtccataa 21953005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 437 - 521
Target Start/End: Original strand, 33534098 - 33534182
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||||||||||||| ||| ||||| || | | ||| | |||||||||||||||| ||| || || |||||| |||||||    
T  33534098 gacttatttgagcttatctagtgacataagtacttgtgagagtatttgagagagcttatgaaaacaaattgtgacatatccataa 33534182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 440 - 560
Target Start/End: Complemental strand, 47970434 - 47970314
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgattt 539  Q
    ||||||||||||||||||||| |||||||| | | | ||||||   || ||||||||||||  |||| |||||| |||||||| | ||||||  | ||||    
T  47970434 ttatttgagcttatctactgacataagcacttgtgaaactgttatggaaagcttatggaaactacttgtgacatttccataaattgttttcagcttattt 47970335  T
Q  540 ccataagcacttcaagataga 560  Q
     ||||||| || || ||||||    
T  47970334 gcataagctctccatgataga 47970314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 427 - 531
Target Start/End: Original strand, 54277242 - 54277346
Alignment:
Q  427 tgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactat 526  Q
    ||||||||  ||||||||||| |||||||| ||| |||| ||| ||| |||||||| | |||||||||  |||| | ||||| |||||| |||||  |||    
T  54277242 tgtttagattgacttatttgaacttatctagtgacataaacacttatgagactgttagcgagagcttacagaaacagcttatcacatgttcataagttat 54277341  T
Q  527 tttca 531  Q
    |||||    
T  54277342 tttca 54277346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 531
Target Start/End: Complemental strand, 7063630 - 7063539
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    ||||||||||| ||||| ||| ||| | || | | ||||||||| ||||| ||||||| || || ||||||||| ||||||| |||||||||    
T  7063630 ttatttgagctcatctaatgatataggtacttgtgagactgtttaagagatcttatgggaacaatttatgacatttccataagctattttca 7063539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 521
Target Start/End: Complemental strand, 7730751 - 7730657
Alignment:
Q  426 ttgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||| || ||||||||||||||| ||||| ||| |||| |||   | ||||| |||  ||||||||| ||||| ||||||||||||||||||||    
T  7730751 ttgtttggatcgacttatttgagct-atctaatgacataaacacgcgtgagactattttggagagcttaaggaaacaacttatgacatgtccataa 7730657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 439 - 518
Target Start/End: Complemental strand, 25717732 - 25717653
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 518  Q
    ||||||||||||||| ||| || |||||||| | | | | ||||||  |||||||||||||| |||||||||| ||||||    
T  25717732 cttatttgagcttatgtaccgacataagcacttgtgaaattgtttggaagagcttatggaaacaacttatgacttgtcca 25717653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 439 - 546
Target Start/End: Complemental strand, 29376042 - 29375935
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatt 538  Q
    ||||||||| |||||||| ||| |||||||| | | |  || ||| |||||||||||||||| | ||||||||| |||||||   | ||||||| | |||    
T  29376042 cttatttgaacttatctattgacataagcacttgtgacgctatttcagagagcttatggaaacagcttatgacaggtccatattttgttttcaacttatt 29375943  T
Q  539 tccataag 546  Q
    ||||||||    
T  29375942 tccataag 29375935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 437 - 495
Target Start/End: Complemental strand, 2811612 - 2811554
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttat 495  Q
    |||||||||||| ||||||||||  |||||||  ||| |||||||||||||||| ||||    
T  2811612 gacttatttgaggttatctactggcataagcatttatgagactgtttgagagagattat 2811554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 440 - 518
Target Start/End: Complemental strand, 25583730 - 25583652
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 518  Q
    ||||||||| |||||| |||| |||| ||  | | |||||||||| ||| ||||||| ||| |||||||||||||||||    
T  25583730 ttatttgagtttatcttctgacataaacatgtgtgagactgtttgggagcgcttatgcaaacaacttatgacatgtcca 25583652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 427 - 521
Target Start/End: Complemental strand, 32072014 - 32071925
Alignment:
Q  427 tgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||| ||| |||||||||||| ||||||| ||| |||||||| | | |||| |||||||     ||||||||| ||||||||||| ||||||||    
T  32072014 tgtttggactgacttatttgagtttatctattgacataagcacttgtgagacagtttgag-----ttatggaaacaacttatgacacgtccataa 32071925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 521
Target Start/End: Original strand, 51560221 - 51560302
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||| |||||||||||||||  |||||||| ||| ||||| |||| |||| |||||| ||| | ||||| |||||| |||||    
T  51560221 ttatatgagcttatctactggcataagcacttatgagactctttgggagaccttatgaaaacaccttatcacatgttcataa 51560302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 4e-22; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 437 - 559
Target Start/End: Complemental strand, 2455951 - 2455829
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    ||||||||||||||||||||| |  |||||||| |   ||| |||||   |||||||||||||| ||||||||||||| ||||||||||||||||| | |    
T  2455951 gacttatttgagcttatctaccggcataagcacttgcgagattgtttagaagagcttatggaaacaacttatgacatgcccataaactattttcaactta 2455852  T
Q  537 tttccataagcacttcaagatag 559  Q
    ||||||||||| || ||||||||    
T  2455851 tttccataagctctccaagatag 2455829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 440 - 547
Target Start/End: Original strand, 8420129 - 8420236
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgattt 539  Q
    ||||||||||||||||| ||| |||| ||| | | |||||||| | |||||||||| |||||| ||||||||||||||| || |||||||||| | ||||    
T  8420129 ttatttgagcttatctattgacataaacacttgtgagactgttagtgagagcttatagaaatagcttatgacatgtccacaagctattttcaacttattt 8420228  T
Q  540 ccataagc 547  Q
    ||||||||    
T  8420229 ccataagc 8420236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 439 - 559
Target Start/End: Original strand, 9833042 - 9833161
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatt 538  Q
    |||||||||| ||||||| ||   |||| || ||| ||||| ||||||||| |||||||||| ||| |||| |||||||||||| ||||||||| | |||    
T  9833042 cttatttgagtttatctattggcgtaagtacttatgagactatttgagagatcttatggaaa-aacatatggcatgtccataaattattttcaacttatt 9833140  T
Q  539 tccataagcacttcaagatag 559  Q
    ||||||||| ||||| |||||    
T  9833141 tccataagctcttcatgatag 9833161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 440 - 518
Target Start/End: Original strand, 733109 - 733187
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 518  Q
    |||||||||||||||||||   |||||||| ||||  ||| ||||| |||||| |||||||||||||||||||||||||    
T  733109 ttatttgagcttatctactaccataagcacttatagaactctttgatagagctgatggaaataacttatgacatgtcca 733187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 438 - 547
Target Start/End: Original strand, 2460081 - 2460190
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgat 537  Q
    ||||||||||||||||  |||   ||||| || | | |||||||||||||||||||||||||| |||||||||||||||  |||  | ||||||| | ||    
T  2460081 acttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttat 2460180  T
Q  538 ttccataagc 547  Q
    ||||||||||    
T  2460181 ttccataagc 2460190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 437 - 521
Target Start/End: Complemental strand, 32917338 - 32917254
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||| ||||||| |||||   |||| ||| | | |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  32917338 gacttattagagcttacctactagaataaacacttgtgagactgtttgggagagcttatggaaacaacttatgacatgtccataa 32917254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 478 - 521
Target Start/End: Complemental strand, 9027678 - 9027635
Alignment:
Q  478 ctgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  9027678 ctgtttgaaagagcttatggaaataacttatgacatgtccataa 9027635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 462 - 541
Target Start/End: Original strand, 27595521 - 27595600
Alignment:
Q  462 ataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttcc 541  Q
    |||||||| ||| |||||||||| ||||  ||||||||| |||||||||||||| ||||| |||||||||| | ||||||    
T  27595521 ataagcacttatgagactgtttgggagaatttatggaaacaacttatgacatgttcataagctattttcaagtaatttcc 27595600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 437 - 514
Target Start/End: Complemental strand, 30865624 - 30865547
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatg 514  Q
    |||||||||||||||||||  | | |||| ||| | | |||| |||| ||||||||||||||||||||||||||||||    
T  30865624 gacttatttgagcttatctgttaacataaacacttgttagacagtttaagagagcttatggaaataacttatgacatg 30865547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 437 - 521
Target Start/End: Complemental strand, 31338118 - 31338033
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgttt-gagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||||||||||||||   |||||||| || || ||| ||| | ||||||||||| ||| ||||||||||||||||||||    
T  31338118 gacttatttgagcttatctactagcataagcacgtacaaaactcttttgtgagagcttatgaaaacaacttatgacatgtccataa 31338033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 475 - 547
Target Start/End: Original strand, 32171350 - 32171422
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 547  Q
    |||||||||||||||||||||| ||| | ||||||||| ||||| || |||||||||  | ||||||||||||    
T  32171350 agactgtttgagagagcttatgaaaacagcttatgacaagtccagaagctattttcagcttatttccataagc 32171422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 484 - 547
Target Start/End: Original strand, 725631 - 725694
Alignment:
Q  484 gagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 547  Q
    ||||||||||||| ||| |||||||||||||||| || ||||||||||  | ||||||||||||    
T  725631 gagagagcttatgaaaacaacttatgacatgtccgtagactattttcagcttatttccataagc 725694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 427 - 521
Target Start/End: Complemental strand, 8348377 - 8348283
Alignment:
Q  427 tgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||| |||||||||| ||||||||||| || |||| ||  | | | |||||||||||||||||| | ||| ||||||| ||||| ||||||    
T  8348377 tgtttagatcgacttattttagcttatctaccgatataatcatttttgatactgtttgagagagcttacgaaaacaacttataacatgaccataa 8348283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 475 - 541
Target Start/End: Original strand, 27693406 - 27693472
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttcc 541  Q
    ||||| |||||||||  ||||||||| |||||||||||||| ||||| |||||||||| | ||||||    
T  27693406 agactatttgagagaatttatggaaacaacttatgacatgttcataagctattttcaagtaatttcc 27693472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 449 - 531
Target Start/End: Original strand, 34538159 - 34538241
Alignment:
Q  449 cttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    |||||||||| | |||||||| | | ||||| ||||||||| |||||  ||| | |||| |||||||||||||||||||||||    
T  34538159 cttatctactcatataagcacttgtgagactatttgagagatcttataaaaacagcttacgacatgtccataaactattttca 34538241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 524
Target Start/End: Original strand, 2027765 - 2027814
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataaact 524  Q
    |||||||||| |||||||||| |||| ||||||||||||||| |||||||    
T  2027765 agactgtttgggagagcttatagaaacaacttatgacatgtcaataaact 2027814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 27615257 - 27615310
Alignment:
Q  492 ttatggaaataacttatgacatgtccataaactattttcaaatgatttccataa 545  Q
    ||||||||| |||||||||||||| ||||| |||||||||| | ||||||||||    
T  27615257 ttatggaaacaacttatgacatgttcataagctattttcaagtaatttccataa 27615310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 521
Target Start/End: Complemental strand, 27857496 - 27857415
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||| ||||||||||| |||  ||| | | | |||||||| ||||||||||| ||| |||||||||||| |||||||    
T  27857496 ttatttgagtttatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaacaacttatgacatctccataa 27857415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 521
Target Start/End: Original strand, 32848528 - 32848609
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||||||||||||| |||||||  | | || | ||| | ||||||||||||||||| ||||||| || |||||||    
T  32848528 ttatttgagcttatctactgacataagcatttgtgagtccgttggggagagcttatggaaatagcttatgatatttccataa 32848609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 479 - 559
Target Start/End: Original strand, 32577957 - 32578037
Alignment:
Q  479 tgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 559  Q
    |||||||||||||||||| ||| |||||||||||||||| | | || ||||||  | ||||||||| || ||||| |||||    
T  32577957 tgtttgagagagcttatgaaaacaacttatgacatgtccttgagctgttttcagcttatttccatatgctcttcaggatag 32578037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 597 - 629
Target Start/End: Complemental strand, 32980523 - 32980491
Alignment:
Q  597 ttgactttattttatgttttattatagaaatag 629  Q
    |||||||||||||||||||||||||||||||||    
T  32980523 ttgactttattttatgttttattatagaaatag 32980491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 442 - 522
Target Start/End: Complemental strand, 33385665 - 33385585
Alignment:
Q  442 atttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaa 522  Q
    |||||| |||||||||||| |||||||| | | | ||||||||  |||| ||||||||| | || ||||||||||||||||    
T  33385665 atttgaacttatctactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 33385585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 479 - 559
Target Start/End: Complemental strand, 34939612 - 34939532
Alignment:
Q  479 tgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 559  Q
    |||||||||||||||||||||| ||||||||||| |||| |||  | ||||||  | |||||||||| | ||||| |||||    
T  34939612 tgtttgagagagcttatggaaacaacttatgacacgtccgtaagttgttttcagcttatttccataacctcttcaggatag 34939532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 547
Target Start/End: Original strand, 9667973 - 9668024
Alignment:
Q  496 ggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 547  Q
    ||||| |||||||||||||||||||| || ||||||| | ||||||||||||    
T  9667973 ggaaacaacttatgacatgtccataagctgttttcaacttatttccataagc 9668024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 547
Target Start/End: Complemental strand, 32171605 - 32171498
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgattt 539  Q
    |||||||| ||||| |||||| |||||||  | | |||||| ||| ||||||||| ||||| ||||||||| |  ||||| |||| ||||||  | ||||    
T  32171605 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 32171506  T
Q  540 ccataagc 547  Q
    ||||||||    
T  32171505 ccataagc 32171498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 559
Target Start/End: Complemental strand, 33887968 - 33887849
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgattt 539  Q
    ||||||||| |||| |||||| || ||||| | | | | |||||||||||  ||||| ||||| |||||||||||| || ||  | ||||||| | ||||    
T  33887968 ttatttgagtttatttactgacattagcacttgtgacattgtttgagagaatttatgaaaatagcttatgacatgttcacaagttgttttcaacttattt 33887869  T
Q  540 ccataagcacttcaagatag 559  Q
    ||||||||| |||| |||||    
T  33887868 ccataagcatttcaggatag 33887849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 437 - 515
Target Start/End: Original strand, 3180998 - 3181076
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 515  Q
    ||||||||||| ||||||||| || |||||||| | | ||||| ||||| |||||| ||| ||| ||||||||| ||||    
T  3180998 gacttatttgaacttatctacagacataagcacttgtgagactatttgaaagagctaatgtaaacaacttatgaaatgt 3181076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 477 - 547
Target Start/End: Original strand, 29957891 - 29957961
Alignment:
Q  477 actgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 547  Q
    ||||||||||||||||||||| ||  ||| ||||||||| ||| | |||||||||  | ||||||||||||    
T  29957891 actgtttgagagagcttatgggaaatactcatgacatgttcatgatctattttcagcttatttccataagc 29957961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 630
Target Start/End: Complemental strand, 2514684 - 2514651
Alignment:
Q  597 ttgactttattttatgttttattatagaaatagc 630  Q
    ||||||||||||||| ||||||||||||||||||    
T  2514684 ttgactttattttatcttttattatagaaatagc 2514651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 524
Target Start/End: Original strand, 9202957 - 9203006
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataaact 524  Q
    ||||||||||||||| |||||| |||||||| ||| ||||| ||||||||    
T  9202957 agactgtttgagagaacttatgaaaataactcatggcatgttcataaact 9203006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 473 - 546
Target Start/End: Original strand, 20368145 - 20368218
Alignment:
Q  473 taagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataag 546  Q
    ||||||| |||| |||| |||||| ||| |||||||||||||| ||||| ||| |||||| | |||| ||||||    
T  20368145 taagactatttgggagaacttatgaaaacaacttatgacatgttcataagctagtttcaacttattttcataag 20368218  T

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Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 589 - 626
Target Start/End: Original strand, 27595647 - 27595684
Alignment:
Q  589 aaaataacttgactttattttatgttttattatagaaa 626  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  27595647 aaaataatttgactttattttatcttttattatagaaa 27595684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 517
Target Start/End: Original strand, 31594356 - 31594393
Alignment:
Q  480 gtttgagagagcttatggaaataacttatgacatgtcc 517  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  31594356 gtttgagagaggttatggaaacaacttatgacatgtcc 31594393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 518
Target Start/End: Complemental strand, 34404637 - 34404600
Alignment:
Q  481 tttgagagagcttatggaaataacttatgacatgtcca 518  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  34404637 tttgggagagcttatggaaacaacttatgacatgtcca 34404600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 2e-21; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 438 - 511
Target Start/End: Complemental strand, 3973682 - 3973609
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgac 511  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| |||||||| ||||||||||    
T  3973682 acttatttgagcttatccactgatataagcacttataagactgtttgagagagcatatggaaacaacttatgac 3973609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 437 - 521
Target Start/End: Original strand, 28803459 - 28803543
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||||||||||||| |  |||||||||| | ||||||||||||||| | |||||||| ||||||||||||||||||||    
T  28803459 gacttatttgagcttatctaccggcataagcacatgtgagactgtttgagagaacatatggaaacaacttatgacatgtccataa 28803543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 436 - 553
Target Start/End: Complemental strand, 43985351 - 43985234
Alignment:
Q  436 cgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatg 535  Q
    |||||||||| || ||||||||||| |||| ||| | ||| |||||||||||||| |||  |||| |||||||||||||||||||| || ||||||| |     
T  43985351 cgacttatttaagtttatctactgacataaacacttgtaaaactgtttgagagagattactgaaacaacttatgacatgtccataagcttttttcaactt 43985252  T
Q  536 atttccataagcacttca 553  Q
     ||||||||||| |||||    
T  43985251 gtttccataagctcttca 43985234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 462 - 562
Target Start/End: Original strand, 1741986 - 1742086
Alignment:
Q  462 ataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatagat 561  Q
    ||||||||  || ||||| |||| ||||||||||||||| |||||||||||||| ||||| |||| ||||| | |||||||||| | ||||| |||||||    
T  1741986 ataagcacccatgagactatttgggagagcttatggaaacaacttatgacatgtgcataagctatcttcaacttatttccataaactcttcatgatagat 1742085  T
Q  562 t 562  Q
    |    
T  1742086 t 1742086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 438 - 544
Target Start/End: Original strand, 43456637 - 43456743
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgat 537  Q
    |||||||||| ||||| |||| | |||| ||| | ||||||||||||| ||||||| || ||| |||| |||||||||||||||||| ||||||  | ||    
T  43456637 acttatttgaacttatttactcacataaacacttgtaagactgtttgaaagagcttgtgaaaacaactcatgacatgtccataaactgttttcagcttat 43456736  T
Q  538 ttccata 544  Q
    |||||||    
T  43456737 ttccata 43456743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 439 - 524
Target Start/End: Complemental strand, 4350829 - 4350744
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaact 524  Q
    ||||||||||||| |||||||| |||||||| ||  ||| ||||||||||| |||||| ||| | |||||||||||| ||||||||    
T  4350829 cttatttgagcttctctactgacataagcacttaagagattgtttgagagaacttatgaaaacagcttatgacatgttcataaact 4350744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 475 - 559
Target Start/End: Complemental strand, 25661210 - 25661126
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 559  Q
    ||||||||||  |||||||| ||||||| ||||||| |||||| |||||| |||||| || |||||||||||| ||||| |||||    
T  25661210 agactgtttggcagagcttacggaaatagcttatgaaatgtccttaaactgttttcagattatttccataagctcttcaggatag 25661126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 475 - 559
Target Start/End: Original strand, 34652003 - 34652087
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 559  Q
    |||| ||| |||| ||||||| |||| |||||||||||||||||||| || ||||||| | |||||||||||| || ||||||||    
T  34652003 agacggttggagaaagcttatagaaacaacttatgacatgtccataagctgttttcaacttatttccataagctctccaagatag 34652087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 495 - 559
Target Start/End: Complemental strand, 36852555 - 36852491
Alignment:
Q  495 tggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 559  Q
    |||| ||||||||||||||||| |||||||||||||| || |||||||||||| || ||||||||    
T  36852555 tggatataacttatgacatgtctataaactattttcagattatttccataagctctccaagatag 36852491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 477 - 532
Target Start/End: Original strand, 11344739 - 11344794
Alignment:
Q  477 actgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 532  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||||||| |||||||    
T  11344739 actgtttgacagaccttatggaaacaacttatgacatgtccataaactgttttcaa 11344794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 427 - 546
Target Start/End: Complemental strand, 18885018 - 18884899
Alignment:
Q  427 tgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactat 526  Q
    ||||| || ||||||||| |||| |||||| ||| ||||| || | |||| ||||||| |||||||||| |||| | |||||||||| ||||| | || |    
T  18885018 tgtttggatcgacttattcgagcgtatctattgacataagaacttgtaaggctgtttgggagagcttatagaaacagcttatgacatttccattagctgt 18884919  T
Q  527 tttcaaatgatttccataag 546  Q
    ||||| || |||||||||||    
T  18884918 tttcagattatttccataag 18884899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 437 - 512
Target Start/End: Complemental strand, 22878239 - 22878164
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgaca 512  Q
    |||||||||||||||||| ||||| |||||||| | | |||||||||| |||| |||||||||| || ||||||||    
T  22878239 gacttatttgagcttatccactgacataagcacttgtgagactgtttgggagaccttatggaaacaaattatgaca 22878164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 426 - 521
Target Start/End: Original strand, 30552561 - 30552656
Alignment:
Q  426 ttgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||  ||| |||||||||||||||||||  |||||||| | | | ||||||||||| || |||| |||| ||||||||||||||| ||||    
T  30552561 ttgtttagattgacatatttgagcttatctactggtataagcacttttgaaactgtttgagataggttatcgaaacaacttatgacatgtcaataa 30552656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 476 - 529
Target Start/End: Complemental strand, 4550849 - 4550796
Alignment:
Q  476 gactgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 529  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||||| |||||||    
T  4550849 gactgtttgggagagcttatggaaacaacttatgacatgttcataagctatttt 4550796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 489 - 546
Target Start/End: Complemental strand, 10285949 - 10285892
Alignment:
Q  489 agcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataag 546  Q
    |||||||| |||||||||||||||||||||||| || ||||||| | |||||||||||    
T  10285949 agcttatgaaaataacttatgacatgtccataagctgttttcaacttatttccataag 10285892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 427 - 512
Target Start/End: Original strand, 14277812 - 14277897
Alignment:
Q  427 tgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgaca 512  Q
    |||||||||||||||||||||| |||||||| || ||||| || | | ||| ||||||  |||||| ||||||| |||||||||||    
T  14277812 tgtttagaccgacttatttgagtttatctacggacataagtacttgtgagagtgtttggaagagctcatggaaacaacttatgaca 14277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 529
Target Start/End: Original strand, 1494415 - 1494467
Alignment:
Q  477 actgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 529  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||| ||||    
T  1494415 actgtttgagagagcttatgaaaacagcttatgacatgtccataaactgtttt 1494467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 427 - 531
Target Start/End: Complemental strand, 32821960 - 32821856
Alignment:
Q  427 tgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactat 526  Q
    ||||||||  |||||||||||||||||||||  |  ||||||  |  |||||||||||  |||| |||| |||| |||||||||||||||||||| || |    
T  32821960 tgtttagattgacttatttgagcttatctaccaacgtaagcatttgcaagactgtttggaagagtttatagaaacaacttatgacatgtccataagctgt 32821861  T
Q  527 tttca 531  Q
    |||||    
T  32821860 tttca 32821856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 437 - 531
Target Start/End: Complemental strand, 9478440 - 9478346
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    ||||||||||| |||||||||  | ||||| || | |  ||||||||||||||| ||||| ||| ||||||| |||||||||||| || ||||||    
T  9478440 gacttatttgaacttatctaccaacataagtacttgtgtgactgtttgagagagtttatgcaaacaacttattacatgtccataagctgttttca 9478346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 43808663 - 43808621
Alignment:
Q  473 taagactgtttgagagagcttatggaaataacttatgacatgt 515  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  43808663 taagactatttgagagagcttatgaaaataacttatgacatgt 43808621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 468 - 521
Target Start/End: Complemental strand, 12785973 - 12785920
Alignment:
Q  468 acatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||| |||||| |||||||||||||| ||||| |||||| |||||||||||||    
T  12785973 acataaaagactatttgagagagcttacggaaacaacttacgacatgtccataa 12785920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 529
Target Start/End: Original strand, 17221472 - 17221561
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 529  Q
    ||||||||  ||||||||||  || ||||| | | |||||||| |  |||||||||||||||| |||||||||| |||||||||| ||||    
T  17221472 ttatttgaaattatctactgtcattagcacttctgagactgttcggaagagcttatggaaatatcttatgacatatccataaactttttt 17221561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 442 - 518
Target Start/End: Complemental strand, 1318371 - 1318296
Alignment:
Q  442 atttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 518  Q
    ||||||| ||||||||||  |||||||| | | |||||||||| ||||||||||| ||| | |||||||||||||||    
T  1318371 atttgagattatctactgc-ataagcacttgtgagactgtttgtgagagcttatgaaaacatcttatgacatgtcca 1318296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 531
Target Start/End: Complemental strand, 787470 - 787379
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    ||||| |||| |||||||||  |||||||| | | | |||||||| |||| |||||| ||| | |||||||||||||||||| || ||||||    
T  787470 ttattcgagcatatctactggcataagcacttgtgacactgtttgtgagaacttatgaaaacagcttatgacatgtccataagctgttttca 787379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 521
Target Start/End: Original strand, 5759505 - 5759587
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||| ||||||| ||  ||||| || | | |||||||||| ||||||||||||||| | |||| |||||||||||||    
T  5759505 acttatttgagtttatctattggtataagtacttgtgagactgtttgggagagcttatggaaacagctta-gacatgtccataa 5759587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 519
Target Start/End: Complemental strand, 29430896 - 29430817
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccat 519  Q
    ||||||||||||||||||||| |||| ||| | |  |||| ||||  ||| |||||| ||||| ||||||||||||||||    
T  29430896 ttatttgagcttatctactgacataaacacttgtgggactatttggaagaacttatgaaaatagcttatgacatgtccat 29430817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 444 - 499
Target Start/End: Complemental strand, 34927097 - 34927042
Alignment:
Q  444 ttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaa 499  Q
    |||||||||| |||||| |||||||| ||||||||||||||  ||| |||||||||    
T  34927097 ttgagcttatttactgacataagcacttataagactgtttggaagaacttatggaa 34927042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 438 - 500
Target Start/End: Complemental strand, 6988259 - 6988197
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 500  Q
    |||||||||| |||||||||||| |||| ||| ||  ||| ||||||||||||||||| ||||    
T  6988259 acttatttgaacttatctactgatataatcacctacgagattgtttgagagagcttatagaaa 6988197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 487 - 521
Target Start/End: Original strand, 9878661 - 9878695
Alignment:
Q  487 agagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||||||| ||||||||||||||||||||    
T  9878661 agagcttatggaaacaacttatgacatgtccataa 9878695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 489 - 531
Target Start/End: Complemental strand, 12215896 - 12215854
Alignment:
Q  489 agcttatggaaataacttatgacatgtccataaactattttca 531  Q
    |||||||||||||| |||||||||||||||||| || ||||||    
T  12215896 agcttatggaaatagcttatgacatgtccataagctgttttca 12215854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 438 - 488
Target Start/End: Original strand, 17775396 - 17775446
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagag 488  Q
    |||||||||||| |||||||||| |||||| | | ||||||||||||||||    
T  17775396 acttatttgagcatatctactgacataagctcttttaagactgtttgagag 17775446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 438 - 559
Target Start/End: Complemental strand, 43142012 - 43141890
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttat-ggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    ||||||||||||||||||||| | |||||||  | | | || |||||| || |||||| ||||| ||||||||||||| ||||||  | ||||||  | |    
T  43142012 acttatttgagcttatctactaacataagcaattgtgaaacagtttgacagcgcttatgggaaacaacttatgacatgcccataagttgttttcatttta 43141913  T
Q  537 tttccataagcacttcaagatag 559  Q
    ||||||||| | ||||| |||||    
T  43141912 tttccataaactcttcaggatag 43141890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 437 - 531
Target Start/End: Original strand, 43529787 - 43529881
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    |||||||||||||||||||| ||  |||||||| | | | |||||||| ||||  ||||| ||| | |||||| ||||| ||||| |||||||||    
T  43529787 gacttatttgagcttatctattggtataagcacttctgacactgtttgggagaatttatgaaaacagcttatgccatgttcataagctattttca 43529881  T

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Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 479 - 520
Target Start/End: Complemental strand, 1830144 - 1830103
Alignment:
Q  479 tgtttgagagagcttatggaaataacttatgacatgtccata 520  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  1830144 tgtttgggagagcttatggaaacatcttatgacatgtccata 1830103  T

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Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 547
Target Start/End: Original strand, 1939326 - 1939371
Alignment:
Q  502 aacttatgacatgtccataaactattttcaaatgatttccataagc 547  Q
    |||||||||||||||||||| || ||||||| | ||||||||||||    
T  1939326 aacttatgacatgtccataagctgttttcaacttatttccataagc 1939371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 522
Target Start/End: Complemental strand, 9996879 - 9996794
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaa 522  Q
    |||||||||||||||||| |||   ||||| || | | |||||| ||| |||||||||| |||| ||||||||||||  |||||||    
T  9996879 gacttatttgagcttatcaactagcataagtacttgtgagactgcttgggagagcttatagaaacaacttatgacatacccataaa 9996794  T

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Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 499
Target Start/End: Complemental strand, 10190382 - 10190345
Alignment:
Q  462 ataagcacatataagactgtttgagagagcttatggaa 499  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  10190382 ataaacacttataagactgtttgagagagcttatggaa 10190345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 441 - 514
Target Start/End: Complemental strand, 13867015 - 13866942
Alignment:
Q  441 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatg 514  Q
    |||||||||||||||||||  |||| ||| | | ||||||||||||||| |||| | ||| ||| |||||||||    
T  13867015 tatttgagcttatctactgccataaacacttgtgagactgtttgagagaacttaagaaaacaacctatgacatg 13866942  T

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Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 478 - 515
Target Start/End: Complemental strand, 15120283 - 15120246
Alignment:
Q  478 ctgtttgagagagcttatggaaataacttatgacatgt 515  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  15120283 ctgtttgggagagcttatggaaacaacttatgacatgt 15120246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 589 - 630
Target Start/End: Complemental strand, 25609786 - 25609745
Alignment:
Q  589 aaaataacttgactttattttatgttttattatagaaatagc 630  Q
    ||||||| ||||||||||||||| |||| |||||||||||||    
T  25609786 aaaataaattgactttattttatcttttcttatagaaatagc 25609745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 512
Target Start/End: Complemental strand, 25609935 - 25609862
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgaca 512  Q
    |||||||||||||||||||| | ||||| || | | |||||| |||  | |||||||||||| |||||||||||    
T  25609935 cttatttgagcttatctactaacataagaacttgtgagactgcttggaatagcttatggaaacaacttatgaca 25609862  T

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Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 486 - 531
Target Start/End: Original strand, 43065428 - 43065473
Alignment:
Q  486 gagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    ||||||||||| ||| ||||||||||||||||||||| | ||||||    
T  43065428 gagagcttatgaaaacaacttatgacatgtccataaattgttttca 43065473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 482 - 547
Target Start/End: Complemental strand, 43205405 - 43205340
Alignment:
Q  482 ttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 547  Q
    ||||||| ||||||||||| ||| ||| ||||||||  ||||| ||||||| | ||||||||||||    
T  43205405 ttgagagtgcttatggaaacaacatataacatgtccgcaaactgttttcaacttatttccataagc 43205340  T

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Target: chr5 (Bit Score: 49; Significance: 1e-18; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 437 - 553
Target Start/End: Original strand, 11297125 - 11297241
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    ||||||||| |||||||||| ||  |||| ||| | ||||||||||||| |||||||||||||| |||||| |||||||| || | |||||||||  | |    
T  11297125 gacttatttaagcttatctagtggcataaacacttgtaagactgtttgaaagagcttatggaaacaacttaagacatgtcaattagctattttcagctta 11297224  T
Q  537 tttccataagcacttca 553  Q
    ||| |||||||||||||    
T  11297225 ttttcataagcacttca 11297241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 437 - 545
Target Start/End: Original strand, 29590559 - 29590666
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    ||||||||||||||||||||| || |||||||| ||| ||||||||||||  |||||||||| | |||||||||| |||||||||  | ||||||| | |    
T  29590559 gacttatttgagcttatctacagacataagcac-tatgagactgtttgagttagcttatggacaaaacttatgacttgtccataagttgttttcaactta 29590657  T
Q  537 tttccataa 545  Q
    |||||||||    
T  29590658 tttccataa 29590666  T

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Target: chr5; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 437 - 521
Target Start/End: Complemental strand, 14980650 - 14980566
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatata-agactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||||||||||||||||  |||||||| |||| |||||||||||||||||||||  |||| ||||||||||||| |||||    
T  14980650 gacttatttgagcttatctactggcataagcac-tatagagactgtttgagagagcttataaaaatgacttatgacatgtacataa 14980566  T

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Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 440 - 531
Target Start/End: Complemental strand, 32172791 - 32172700
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    |||||||||||||| ||||   |||||||| | | |||  ||||| ||||||||||||||| |||||||||||||||||||| | |||||||    
T  32172791 ttatttgagcttatatactagcataagcacttgtgagatagtttgggagagcttatggaaacaacttatgacatgtccataagccattttca 32172700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 440 - 559
Target Start/End: Original strand, 37611147 - 37611266
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgattt 539  Q
    |||||||| |||||||||||  | ||| || | | ||| |||||||||||||||||| ||| ||||| |||||||| ||||| || ||||||  | ||||    
T  37611147 ttatttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttattt 37611246  T
Q  540 ccataagcacttcaagatag 559  Q
    |||||||| || ||||||||    
T  37611247 ccataagctctccaagatag 37611266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 440 - 559
Target Start/End: Original strand, 37787877 - 37787996
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgattt 539  Q
    |||||||| |||||||||||  | ||| || | | ||| |||||||||||||||||| ||| ||||| |||||||| ||||| || ||||||  | ||||    
T  37787877 ttatttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttattt 37787976  T
Q  540 ccataagcacttcaagatag 559  Q
    |||||||| || ||||||||    
T  37787977 ccataagctctccaagatag 37787996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 437 - 558
Target Start/End: Complemental strand, 11457239 - 11457119
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    |||||||||||||||||||| ||  | || ||| | | |||||||||   |||||||||||||| |||||||||||||||||||| ||  ||||| || |    
T  11457239 gacttatttgagcttatctattggcagaaacacttgtgagactgttttgaagagcttatggaaacaacttatgacatgtccataagct-gtttcatatta 11457141  T
Q  537 tttccataagcacttcaagata 558  Q
    |||| |||||| || |||||||    
T  11457140 tttctataagctctccaagata 11457119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 476 - 521
Target Start/End: Original strand, 38047847 - 38047892
Alignment:
Q  476 gactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||    
T  38047847 gactgtttgggagagcttatggaaacaacttatgacatgtccataa 38047892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 439 - 559
Target Start/End: Complemental strand, 36639661 - 36639541
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatt 538  Q
    ||||||||| |||| ||| | | |||||||| ||||||||||||||||||| |||| | ||||  |||||||| |||||||||  | |||||   | |||    
T  36639661 cttatttgaacttacctatttacataagcacttataagactgtttgagagaacttacgaaaattgcttatgacgtgtccataagttgttttcctcttatt 36639562  T
Q  539 tccataagcacttcaagatag 559  Q
    | ||||||| |||||||||||    
T  36639561 ttcataagctcttcaagatag 36639541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 547
Target Start/End: Complemental strand, 41052967 - 41052899
Alignment:
Q  479 tgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 547  Q
    |||||| |||||||||| |||| ||| |||||||||| ||||||||||||| || | ||||||||||||    
T  41052967 tgtttgggagagcttatagaaacaacctatgacatgttcataaactatttttaacttatttccataagc 41052899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 438 - 521
Target Start/End: Complemental strand, 35960552 - 35960470
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||||||||| | ||  ||||||| || | ||||| |||||||||||||||||||  |||||| |||||||||||||    
T  35960552 acttatttgagcttatcaattggcataagca-atgtcagactatttgagagagcttatggaagcaacttacgacatgtccataa 35960470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 437 - 515
Target Start/End: Original strand, 499660 - 499738
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 515  Q
    |||||||||||||||| ||||||| |||||||| | | || ||||||| |||| |||||| ||| | ||||||||||||    
T  499660 gacttatttgagcttacctactgacataagcacctgttaggctgtttgggagaacttatgaaaacagcttatgacatgt 499738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 441 - 547
Target Start/End: Original strand, 35095720 - 35095825
Alignment:
Q  441 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttc 540  Q
    |||||||| ||||||||| | |||| |||  || ||||||||||  |||||||||||||||| |||||||||||| ||||  |  ||||||| | |||||    
T  35095720 tatttgagtttatctactaa-ataaacactaatgagactgtttggaagagcttatggaaatatcttatgacatgtacatatgccgttttcaacttatttc 35095818  T
Q  541 cataagc 547  Q
    |||||||    
T  35095819 cataagc 35095825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 521
Target Start/End: Original strand, 11095427 - 11095508
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||| |||||||||||||| |||| ||| | | | | ||||||||||| ||| |||||| | ||||||||||||||||||    
T  11095427 ttatttaagcttatctactgacataaacacttgtgatattgtttgagagaacttgtggaaacagcttatgacatgtccataa 11095508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 439 - 524
Target Start/End: Original strand, 25720348 - 25720433
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaact 524  Q
    |||||||||| ||||||||||  |||||||| | | ||||||| |||||||||||||  ||| || | ||||||||| ||||||||    
T  25720348 cttatttgaggttatctactggcataagcacttgtgagactgtctgagagagcttataaaaacaattcatgacatgttcataaact 25720433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 437 - 521
Target Start/End: Original strand, 16016355 - 16016439
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||||||||||| | ||| |||||||| | | ||||||||| | | |||| || |||||||||||||| ||| ||||||    
T  16016355 gacttatttgagcttatcaaatgacataagcacttgtcagactgttttacaaagctaatagaaataacttatgaaatgcccataa 16016439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 477 - 521
Target Start/End: Original strand, 16944944 - 16944988
Alignment:
Q  477 actgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||    
T  16944944 actgtttgagagaggtcatggaaataacttatgatatgtccataa 16944988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 439 - 531
Target Start/End: Original strand, 34117479 - 34117570
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    |||||| ||||||||||||||  |||| ||| | | ||||||| || ||||||||||||| | ||||||||||||| |||||| || ||||||    
T  34117479 cttattggagcttatctactggcataaacacttgttagactgtctg-gagagcttatggagacaacttatgacatgcccataagctgttttca 34117570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 439 - 523
Target Start/End: Original strand, 39257325 - 39257409
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaac 523  Q
    ||||||| |||||||||||| | |||||||| | | ||||||| || || ||||||  |||| |||| |||||||||||||||||    
T  39257325 cttatttaagcttatctactaacataagcacttgtgagactgtgtgcgaaagcttagagaaacaactaatgacatgtccataaac 39257409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 521
Target Start/End: Complemental strand, 10152450 - 10152391
Alignment:
Q  462 ataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||| | ||||| |||  ||||||||||| ||| ||||||||||||||||||||    
T  10152450 ataagcacatgtgagactattttggagagcttatgaaaacaacttatgacatgtccataa 10152391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 11700356 - 11700415
Alignment:
Q  486 gagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataa 545  Q
    ||||| ||||||||| |||||||||||||||||||| || |||||| || |||| |||||    
T  11700356 gagagtttatggaaacaacttatgacatgtccataagctgttttcagattattttcataa 11700415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 520
Target Start/End: Original strand, 12459930 - 12460013
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 520  Q
    |||||||||  |||||||| |||| |||||||| | | |||||||||| |||| | |||| ||| |||||||||||||| ||||    
T  12459930 gacttatttcggcttatctgctgacataagcacctgtgagactgtttgggagaacctatgaaaacaacttatgacatgttcata 12460013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 486 - 521
Target Start/End: Original strand, 40499704 - 40499739
Alignment:
Q  486 gagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||||||| ||||||||||||||||||||    
T  40499704 gagagcttatggaaacaacttatgacatgtccataa 40499739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 438 - 508
Target Start/End: Original strand, 12407660 - 12407730
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttat 508  Q
    |||||||||| |||||||| ||| |||| ||| | | |||| ||||||||||||||||| |||| ||||||    
T  12407660 acttatttgaacttatctattgacataaacacttgtgagacggtttgagagagcttatgaaaatgacttat 12407730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 484 - 558
Target Start/End: Original strand, 13604825 - 13604899
Alignment:
Q  484 gagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagata 558  Q
    ||||||||||||| ||| | |||||||||||||||||   | ||||||| | |||| ||||||| ||||||||||    
T  13604825 gagagagcttatgaaaacagcttatgacatgtccatacgttgttttcaacttattttcataagctcttcaagata 13604899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 477 - 531
Target Start/End: Original strand, 28586735 - 28586789
Alignment:
Q  477 actgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    |||||||| ||||||||||||||||| |||||||||| ||| ||| || ||||||    
T  28586735 actgtttgggagagcttatggaaatagcttatgacatatccgtaagctgttttca 28586789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 439 - 521
Target Start/End: Complemental strand, 40534338 - 40534256
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||| |||| |||||| |||| ||| | | | |||||||  |||||||||||||| || |||||||||||| |||||    
T  40534338 cttatttgagtttatttactgacataaacacttgtgatactgtttaggagagcttatggaagtagcttatgacatgttcataa 40534256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 439 - 521
Target Start/End: Complemental strand, 42647029 - 42646948
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||||||||||||||| || ||||| |  |||||| ||||  ||| |||||| ||||| |||||||||||| |||||    
T  42647029 cttatttgagcttatctactgacattagcac-ttgaagactatttggaagaacttatgaaaatagcttatgacatgttcataa 42646948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 501
Target Start/End: Original strand, 7550450 - 7550511
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaat 501  Q
    ||||||||||||||| ||||| ||||  || | | ||||| |||||||||||||||||||||    
T  7550450 ttatttgagcttatccactgacataattacttgtgagactctttgagagagcttatggaaat 7550511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 514
Target Start/End: Original strand, 12242683 - 12242716
Alignment:
Q  481 tttgagagagcttatggaaataacttatgacatg 514  Q
    |||||||||||||||||||| |||||||||||||    
T  12242683 tttgagagagcttatggaaaaaacttatgacatg 12242716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 442 - 531
Target Start/End: Complemental strand, 29336766 - 29336677
Alignment:
Q  442 atttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    ||||||| ||||||| ||  | |||||| | | |||||| ||||||||||||||||||| |||||||| |||  ||||||| | ||||||    
T  29336766 atttgagtttatctattggcaaaagcacttgtgagactgattgagagagcttatggaaacaacttatggcatacccataaaatgttttca 29336677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 502
Target Start/End: Complemental strand, 37969018 - 37968953
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaata 502  Q
    ||||| |||||||||||||||||| ||||| || | | | ||||||||||||| |||||| |||||    
T  37969018 gacttgtttgagcttatctactgacataagtacttgtgaaactgtttgagagatcttatgaaaata 37968953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 427 - 496
Target Start/End: Complemental strand, 38028687 - 38028618
Alignment:
Q  427 tgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatg 496  Q
    ||||| |||||||||||||||||||||||||||  || |  || ||| ||||| ||| ||||||||||||    
T  38028687 tgtttggaccgacttatttgagcttatctactggtatgaaaacttatgagactatttcagagagcttatg 38028618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 477 - 559
Target Start/End: Original strand, 31875564 - 31875646
Alignment:
Q  477 actgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 559  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| | |||||||| | |||| ||||||| ||| |||||||    
T  31875564 actgtttgagaaagcttatggaaacaacttatgacatgtccataagccattttcaacttattttcataagctcttgaagatag 31875646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 437 - 543
Target Start/End: Complemental strand, 12361335 - 12361227
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagag--cttatggaaataacttatgacatgtccataaactattttcaaat 534  Q
    ||||||||||| |||||||||||| ||||| || | | ||||| ||||||||||  ||||| |||||| |||||||||||||||||| || ||||||| |    
T  12361335 gacttatttgaacttatctactgatataagtacttgttagactctttgagagagatcttatagaaatagcttatgacatgtccataagctgttttcaact 12361236  T
Q  535 gatttccat 543  Q
     ||||||||    
T  12361235 tatttccat 12361227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 529
Target Start/End: Original strand, 30987961 - 30988012
Alignment:
Q  478 ctgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 529  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  30987961 ctgtttgagagagcttatggaaacaacttatgacatgtccataagctatttt 30988012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 439 - 531
Target Start/End: Complemental strand, 43709403 - 43709309
Alignment:
Q  439 cttatttgagcttatctactgagataagcaca--tataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    |||||||||||||||||| || || | |||||  ||| ||| |||||| | ||||||||||||||||||||||||||||| |||| |||||||||    
T  43709403 cttatttgagcttatctattgtgacatgcacacttatgagagtgtttgggtgagcttatggaaataacttatgacatgtctataagctattttca 43709309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 478 - 547
Target Start/End: Complemental strand, 8558760 - 8558691
Alignment:
Q  478 ctgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 547  Q
    ||||||| ||||||||||||||| ||||| |||||||||||| ||||||||||| || |||| |||||||    
T  8558760 ctgtttgggagagcttatggaaacaacttgtgacatgtccatcaactattttcagattattttcataagc 8558691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 439 - 515
Target Start/End: Original strand, 30191072 - 30191148
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 515  Q
    |||||||||| ||||||| ||  |||||||| | | |||||||||| ||||||||||||||| ||||||||||||||    
T  30191072 cttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgt 30191148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 477 - 531
Target Start/End: Original strand, 4055585 - 4055639
Alignment:
Q  477 actgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    |||||||| ||||| |||| |||||||||||||||||||||||||||| ||||||    
T  4055585 actgtttgggagagtttatagaaataacttatgacatgtccataaactgttttca 4055639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 437 - 547
Target Start/End: Complemental strand, 4560643 - 4560533
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    |||||||||||||||||||| ||| |||||||| | | ||  ||||||  ||| |||||||||||||||||| |||||||  ||| || |||||| || |    
T  4560643 gacttatttgagcttatctattgacataagcacttgtgaggttgtttggaagaacttatggaaataacttataacatgtcagtaagctgttttcagatta 4560544  T
Q  537 tttccataagc 547  Q
    |||| ||||||    
T  4560543 tttcgataagc 4560533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 442 - 519
Target Start/End: Complemental strand, 21130748 - 21130671
Alignment:
Q  442 atttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccat 519  Q
    |||||||||||| | |||| ||||  || | | |||||||||||||||||||||||||||| ||| ||||||||||||    
T  21130748 atttgagcttatgtgctgacataaatacttgtgagactgtttgagagagcttatggaaatagcttttgacatgtccat 21130671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 475 - 531
Target Start/End: Complemental strand, 14949969 - 14949913
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    |||||||||  ||||||||||| |||||||||||||||||||||||| || ||||||    
T  14949969 agactgtttaggagagcttatgaaaataacttatgacatgtccataagctgttttca 14949913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 442 - 500
Target Start/End: Complemental strand, 24326167 - 24326109
Alignment:
Q  442 atttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 500  Q
    ||||||||||||||||||  |||||||| | | |||||||||| |||||||||||||||    
T  24326167 atttgagcttatctactggcataagcacttgtgagactgtttgggagagcttatggaaa 24326109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 547
Target Start/End: Complemental strand, 27646009 - 27645935
Alignment:
Q  473 taagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 547  Q
    |||||| ||||||||||||||||| | | |||||||||||| || |||| |||||||||| | ||||| ||||||    
T  27646009 taagaccgtttgagagagcttatgcatacaacttatgacatatctataagctattttcaacttatttctataagc 27645935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 428 - 545
Target Start/End: Complemental strand, 4511178 - 4511061
Alignment:
Q  428 gtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatt 527  Q
    |||| ||||||||| ||| |||||||||||||  |||||||| | | ||||| || || ||| |||||| ||| |||||| |||||| || ||| |||||    
T  4511178 gtttggaccgacttgttttagcttatctactggtataagcacttgtgagactattcgaaagaacttatgaaaacaacttaagacatgcccgtaagctatt 4511079  T
Q  528 ttcaaatgatttccataa 545  Q
    ||||  | ||||||||||    
T  4511078 ttcattttatttccataa 4511061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 437 - 521
Target Start/End: Complemental strand, 5069836 - 5069754
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||| ||||||||||||| | ||  || ||  |||||||||||||||||||||||||| | ||||| |||||| |||||    
T  5069836 gacttatttgtgcttatctactgacagaatgacgta--agactgtttgagagagcttatggaaacatcttataacatgttcataa 5069754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 478 - 531
Target Start/End: Original strand, 6509273 - 6509326
Alignment:
Q  478 ctgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    |||||||||||||||||| |||| | ||||||||||| | ||||||||||||||    
T  6509273 ctgtttgagagagcttatagaaacagcttatgacatgcctataaactattttca 6509326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 531
Target Start/End: Complemental strand, 9700141 - 9700048
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    |||||||||||||||||||||   |||| ||| | | ||||| ||||||||||||| || ||  || ||||||||||||||||| || ||||||    
T  9700141 acttatttgagcttatctactagcataaacacttgtgagactatttgagagagcttgtgaaatcaatttatgacatgtccataagctgttttca 9700048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 474 - 515
Target Start/End: Complemental strand, 37461246 - 37461205
Alignment:
Q  474 aagactgtttgagagagcttatggaaataacttatgacatgt 515  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  37461246 aagactgtatgagagagtttatggaaataacttatgacatgt 37461205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 437 - 518
Target Start/End: Original strand, 39551138 - 39551219
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 518  Q
    |||||||||||| |||||||| || |||||||  | | | |||||||| ||||  ||||||||| |||||||||||||||||    
T  39551138 gacttatttgagattatctacggatataagcatttgtgaaactgtttgggagaatttatggaaacaacttatgacatgtcca 39551219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 437 - 517
Target Start/End: Complemental strand, 7008739 - 7008660
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcc 517  Q
    |||||||||||| ||||||||||  |||||||| | | |||| ||| |||||||||||| |||| ||| ||||||||||||    
T  7008739 gacttatttgagtttatctactggcataagcacttgtgagac-gttagagagagcttatagaaacaacctatgacatgtcc 7008660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 475 - 559
Target Start/End: Original strand, 7918413 - 7918497
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 559  Q
    |||||||||| ||||||||||| ||| |||||| ||||||| ||||| || ||| ||| | ||||| |||||| || ||||||||    
T  7918413 agactgtttgggagagcttatgaaaacaacttaagacatgttcataagctgtttccaacttatttcaataagctctccaagatag 7918497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 437 - 493
Target Start/End: Original strand, 11059658 - 11059714
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagctt 493  Q
    ||||||| |||||||||||| ||| |||||||| ||||||||||| || ||||||||    
T  11059658 gacttatgtgagcttatctaatgacataagcacttataagactgtctgggagagctt 11059714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 437 - 521
Target Start/End: Complemental strand, 40071890 - 40071806
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||| ||||||||||||| ||   ||| | |||| | ||| |||||| ||||||||||||||| |||||||||||||| |||||    
T  40071890 gacttctttgagcttatctcctaccatatgaacatgtgagagtgtttgggagagcttatggaaacaacttatgacatgttcataa 40071806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 488
Target Start/End: Original strand, 3634613 - 3634664
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagag 488  Q
    ||||||||||||||||||| |||| ||| |||| | ||||||||||||||||    
T  3634613 gacttatttgagcttatctgctgacatatgcacttgtaagactgtttgagag 3634664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 521
Target Start/End: Original strand, 11569395 - 11569470
Alignment:
Q  446 gagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||| |||  |||| ||| | | ||||||||| |||||||||||||||| | |||||||||||| |||||    
T  11569395 gagcttatctgctggcataaccacttgtgagactgtttaagagagcttatggaaacagcttatgacatgtacataa 11569470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 532
Target Start/End: Original strand, 43368629 - 43368724
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 532  Q
    ||||||||||| |||||||||| | |||||||  | | |||||| |||  | |||||||| ||| |||||||||||||| ||| | ||||||||||    
T  43368629 gacttatttgatcttatctactaacataagcatttgtgagactggttgtaacagcttatgaaaacaacttatgacatgttcattagctattttcaa 43368724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 437 - 547
Target Start/End: Complemental strand, 6950463 - 6950353
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    |||||||||||| ||||||||||  |||| ||  | | ||| |||||| ||||||||||| ||| ||| ||||||||||| ||||  | ||||||  | |    
T  6950463 gacttatttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgtcgataagttgttttcagctta 6950364  T
Q  537 tttccataagc 547  Q
    |||||||||||    
T  6950363 tttccataagc 6950353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 479 - 521
Target Start/End: Original strand, 9540967 - 9541009
Alignment:
Q  479 tgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||| ||||||||||||||| | ||||||||||||||||||    
T  9540967 tgtttgggagagcttatggaaacatcttatgacatgtccataa 9541009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 475 - 521
Target Start/End: Complemental strand, 9572973 - 9572927
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||| |||| |||| | ||||||||||||||||||||||||    
T  9572973 agactgtttgtgagaacttacgaaaataacttatgacatgtccataa 9572927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 440 - 510
Target Start/End: Original strand, 18931230 - 18931300
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatga 510  Q
    |||||||||||||||||  || ||||||||  |  ||||||||| |||||||||||||||  |||||||||    
T  18931230 ttatttgagcttatctatagacataagcactcaagagactgtttaagagagcttatggaagaaacttatga 18931300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 486 - 544
Target Start/End: Original strand, 37740405 - 37740462
Alignment:
Q  486 gagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccata 544  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||  | |||||||||    
T  37740405 gagagtttatggaaacaacttatgacatgtccat-aactattttcagcttatttccata 37740462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 630
Target Start/End: Original strand, 1470944 - 1470977
Alignment:
Q  597 ttgactttattttatgttttattatagaaatagc 630  Q
    ||||||||||||||| ||||||||||||||||||    
T  1470944 ttgactttattttatcttttattatagaaatagc 1470977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 589 - 630
Target Start/End: Complemental strand, 4558788 - 4558747
Alignment:
Q  589 aaaataacttgactttattttatgttttattatagaaatagc 630  Q
    ||||||| || |||||||||||| ||||||||||||||||||    
T  4558788 aaaataatttaactttattttatcttttattatagaaatagc 4558747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 547
Target Start/End: Complemental strand, 11183682 - 11183576
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatt 538  Q
    |||||||||||||||||||||| | |||| |||   ||||| ||  |||||||||||  ||| ||||||||| ||||| |||| || ||||||  | |||    
T  11183682 cttatttgagcttatctactgacaaaagctcatgggagactctt--agagagcttataaaaacaacttatgatatgtctataagctgttttcagcttatt 11183585  T
Q  539 tccataagc 547  Q
    |||||||||    
T  11183584 tccataagc 11183576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 512
Target Start/End: Original strand, 25881350 - 25881419
Alignment:
Q  443 tttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgaca 512  Q
    |||||| ||||||||||| ||||| || | | ||||||||||| ||||||||  |||| |||||||||||    
T  25881350 tttgagtttatctactgacataagtacttgtgagactgtttgaaagagcttagagaaacaacttatgaca 25881419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 485 - 530
Target Start/End: Original strand, 29168642 - 29168687
Alignment:
Q  485 agagagcttatggaaataacttatgacatgtccataaactattttc 530  Q
    |||||||||||| ||| | |||||||||||||||||| ||||||||    
T  29168642 agagagcttatgaaaacagcttatgacatgtccataagctattttc 29168687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 541
Target Start/End: Original strand, 29262858 - 29262907
Alignment:
Q  492 ttatggaaataacttatgacatgtccataaactattttcaaatgatttcc 541  Q
    ||||||||| |||||||||||||| ||||| |||||||||| | ||||||    
T  29262858 ttatggaaacaacttatgacatgttcataagctattttcaagtaatttcc 29262907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 437 - 559
Target Start/End: Original strand, 27626052 - 27626174
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    ||||| ||| ||||||||||||||  | ||| | | | ||| ||||||||| |||||||||||| | ||||||||||||||||||||| |||| || | |    
T  27626052 gacttgtttcagcttatctactgacgtcagctcttgtgagattgtttgagaaagcttatggaaacagcttatgacatgtccataaactgttttaaactta 27626151  T
Q  537 tttccataagcacttcaagatag 559  Q
    ||||||||||| ||||| |||||    
T  27626152 tttccataagctcttcatgatag 27626174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 437 - 546
Target Start/End: Original strand, 48157049 - 48157158
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    ||||||||||||||||| ||||||  ||||||  | | |||||||||| |||||||||| |||| |||||||| ||||||||||| || ||||||  | |    
T  48157049 gacttatttgagcttatttactgatttaagcatttgtgagactgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagctta 48157148  T
Q  537 tttccataag 546  Q
    ||||||||||    
T  48157149 tttccataag 48157158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 439 - 531
Target Start/End: Original strand, 36598287 - 36598379
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    ||||||||| |||| ||||||| |||||||  | | ||| |||||||||||||||||||||| | |||||||||||| ||||| || ||||||    
T  36598287 cttatttgaacttaactactgacataagcaattgtgagattgtttgagagagcttatggaaacatcttatgacatgttcataagctgttttca 36598379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 437 - 531
Target Start/End: Complemental strand, 1418560 - 1418468
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    |||||||||||||||||||||||  |||||||| ||| || ||||||| |||||||||| |||| |  |||   |||||||||||||||||||||    
T  1418560 gacttatttgagcttatctactggcataagcacttatgaggctgtttgtgagagcttatagaaaca--ttacaccatgtccataaactattttca 1418468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 437 - 516
Target Start/End: Original strand, 39542229 - 39542308
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtc 516  Q
    |||||||||||| |||||||||   |||||||| |   |||| |||| ||||||||||||||||||||||||||||||||    
T  39542229 gacttatttgagtttatctactagcataagcacttgcgagacagttttagagagcttatggaaataacttatgacatgtc 39542308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 521
Target Start/End: Complemental strand, 33894766 - 33894684
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||||||||| | ||| |||||||| | | |||||||||| ||||||||||| ||| | | ||||||||||||||||    
T  33894766 cttatttgagcttatcaaatgacataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataa 33894684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 475 - 553
Target Start/End: Complemental strand, 44808261 - 44808183
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttca 553  Q
    ||||||||||| ||| |||||| |||||||||||||||||||||||| || ||||||  | |||| ||||||| |||||    
T  44808261 agactgtttgatagaccttatgaaaataacttatgacatgtccataacctgttttcagcttattttcataagcccttca 44808183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 440 - 524
Target Start/End: Complemental strand, 8427151 - 8427067
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaact 524  Q
    ||||||||||||||||||| | ||||| || | | |||||||||| | |||| |||||||| |||||| ||| ||||||||||||    
T  8427151 ttatttgagcttatctactaacataagtacttgtgagactgtttgggggagcctatggaaacaacttacgacgtgtccataaact 8427067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 437 - 521
Target Start/End: Complemental strand, 23214996 - 23214912
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||| ||||||||||   |||| ||| ||| |||||||||||||||  ||||| ||| |||||||||||| |||||||    
T  23214996 gacttatttgaccttatctactagcataaacacttatgagactgtttgagagaatttatgaaaacaacttatgacatttccataa 23214912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 440 - 519
Target Start/End: Original strand, 30748966 - 30749045
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccat 519  Q
    ||||||||||||||||||||| ||||||  || | ||||||||||||||| |||||| ||| ||  ||| ||||||||||    
T  30748966 ttatttgagcttatctactgacataagccaatgtgagactgtttgagagaacttatgaaaacaatctataacatgtccat 30749045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 443 - 542
Target Start/End: Complemental strand, 45078413 - 45078314
Alignment:
Q  443 tttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttcca 542  Q
    |||||| ||||||||||| |||||||| | |  ||| |||   |||| ||||| ||||||||||||||||||||||||| || ||||||| | |||||||    
T  45078413 tttgagtttatctactgatataagcacttgtgtgacagttcaggagaacttatagaaataacttatgacatgtccataagctgttttcaacttatttcca 45078314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 486 - 528
Target Start/End: Complemental strand, 5269578 - 5269536
Alignment:
Q  486 gagagcttatggaaataacttatgacatgtccataaactattt 528  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  5269578 gagagcttatggaaatagcttacgacatgtccataaactattt 5269536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 437 - 547
Target Start/End: Original strand, 12234818 - 12234928
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    |||||| ||||||||||||||||  || ||||| | | |||||| |||  | ||||||| |||| ||||||||||||||| |||| || ||||||  | |    
T  12234818 gacttagttgagcttatctactggcattagcacgtgtgagactgcttggaatagcttatagaaacaacttatgacatgtctataagctgttttcagctta 12234917  T
Q  537 tttccataagc 547  Q
    |||||||||||    
T  12234918 tttccataagc 12234928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 449 - 547
Target Start/End: Original strand, 22387837 - 22387935
Alignment:
Q  449 cttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 547  Q
    ||||| |||||| |||| ||| | | |||||||||| ||||||||||| ||| |||||||| |||||  ||||||| |||| || | ||||||||||||    
T  22387837 cttatttactgacataaacacgtgtgagactgtttgggagagcttatgaaaacaacttatggcatgtttataaactgtttttaacttatttccataagc 22387935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 437 - 515
Target Start/End: Original strand, 25670515 - 25670593
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 515  Q
    |||||| ||||||||||||| ||| |||||| | | | ||||||||||||| | |||||| ||| ||||||||||||||    
T  25670515 gacttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgacatgt 25670593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 531
Target Start/End: Complemental strand, 30751659 - 30751566
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    |||||||| | |||||||||||| |||||||| | |  ||||||||| |||||||||| |||| |  ||||  |||||||||||||| ||||||    
T  30751659 acttatttaaacttatctactgacataagcacttgtgcgactgtttgggagagcttatagaaacagtttatagcatgtccataaactgttttca 30751566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 438 - 521
Target Start/End: Complemental strand, 24048680 - 24048599
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||| ||||||||||| ||||| || || |||||||||||  ||||||||||  | || |||||| |||||||||||    
T  24048680 acttatttgagtttatctactgacataagtacttaaaagactgtttggaagagcttatg--attagcttatgtcatgtccataa 24048599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 437 - 513
Target Start/End: Complemental strand, 31341276 - 31341200
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacat 513  Q
    ||||||||||||||| ||||||   |||| ||| | |||||||||||| ||||| ||||||||| |||| |||||||    
T  31341276 gacttatttgagcttttctacttgcataaacacttttaagactgtttgggagagtttatggaaacaactaatgacat 31341200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 487 - 559
Target Start/End: Complemental strand, 36370760 - 36370688
Alignment:
Q  487 agagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 559  Q
    |||||||||| ||| |||||  ||||||||||||||| ||||| || | |||||||||||| ||||| |||||    
T  36370760 agagcttatgaaaaaaacttgggacatgtccataaacgatttttaatttatttccataagctcttcaggatag 36370688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 437 - 521
Target Start/End: Original strand, 39551477 - 39551561
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||||| || |||||| | ||||  || ||||| | ||| ||| |||| ||||||||| ||||||||||||||||||||    
T  39551477 gacttatttgagtttttctacttacataatgacttataaaattgtctgaaagaggttatggaaacaacttatgacatgtccataa 39551561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 480 - 528
Target Start/End: Original strand, 47427275 - 47427323
Alignment:
Q  480 gtttgagagagcttatggaaataacttatgacatgtccataaactattt 528  Q
    ||||||||||||||||||||| |||||||||||| || |||| ||||||    
T  47427275 gtttgagagagcttatggaaacaacttatgacatctctataagctattt 47427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 481 - 544
Target Start/End: Original strand, 3500940 - 3501003
Alignment:
Q  481 tttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccata 544  Q
    |||| |||||||||||||||||||||||||||||| ||| | || ||||||  | |||||||||    
T  3500940 tttgtgagagcttatggaaataacttatgacatgtacatcagctgttttcagcttatttccata 3501003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 444 - 547
Target Start/End: Complemental strand, 28165225 - 28165122
Alignment:
Q  444 ttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccat 543  Q
    ||||||||||||||    |||||||| ||| ||||| ||||||| |||||||||||| | || | ||| ||| ||||| || ||||||| | ||||||||    
T  28165225 ttgagcttatctaccagcataagcacttatgagactctttgagatagcttatggaaacagctcaagacctgttcataagctgttttcaacttatttccat 28165126  T
Q  544 aagc 547  Q
    ||||    
T  28165125 aagc 28165122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 491 - 550
Target Start/End: Complemental strand, 29290420 - 29290361
Alignment:
Q  491 cttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcact 550  Q
    |||||||||| |||||||||||||||||||| || |||||||   |||||| ||||||||    
T  29290420 cttatggaaacaacttatgacatgtccataagctgttttcaacatatttccgtaagcact 29290361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 512
Target Start/End: Original strand, 34754739 - 34754814
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgaca 512  Q
    ||||| |||||||||||||| ||| | || ||| ||| |||||||||||||||||||| | ||| | |||||||||    
T  34754739 gacttgtttgagcttatctattgacacaaacacttatgagactgtttgagagagcttaagaaaacatcttatgaca 34754814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 522
Target Start/End: Original strand, 44989908 - 44989943
Alignment:
Q  487 agagcttatggaaataacttatgacatgtccataaa 522  Q
    |||||||||||||||| |||||||||||||||||||    
T  44989908 agagcttatggaaatagcttatgacatgtccataaa 44989943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 439 - 513
Target Start/End: Original strand, 3836614 - 3836688
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacat 513  Q
    |||||||||||||||||||||   ||||||| | | | |||||||| |||| |||||| ||||| ||||||||||    
T  3836614 cttatttgagcttatctactggcttaagcacttgtgaaactgtttgggagaacttatgaaaatagcttatgacat 3836688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 441 - 547
Target Start/End: Original strand, 27121527 - 27121632
Alignment:
Q  441 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttc 540  Q
    ||||||||||||| |||| | |||||||  | | ||| |||||| ||||| ||||||||||| |||||||||| || |||| || ||||||| |  ||||    
T  27121527 tatttgagcttatttactaatataagcatctgtgagattgtttgggagagtttatggaaatagcttatgacat-tcaataagctgttttcaacttgtttc 27121625  T
Q  541 cataagc 547  Q
    |||||||    
T  27121626 cataagc 27121632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 479 - 521
Target Start/End: Complemental strand, 36538007 - 36537965
Alignment:
Q  479 tgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||| |||||||||| |||||||||||||| |||||    
T  36538007 tgtttgagagaacttatggaaacaacttatgacatgttcataa 36537965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 475 - 521
Target Start/End: Complemental strand, 39360126 - 39360080
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||| |||| ||||||||| |||||||||||| |||||||    
T  39360126 agactgtttgatagagtttatggaaacaacttatgacatatccataa 39360080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 588 - 630
Target Start/End: Complemental strand, 49060531 - 49060489
Alignment:
Q  588 aaaaataacttgactttattttatgttttattatagaaatagc 630  Q
    |||||||| ||||||||||||||| |||| |||||||||||||    
T  49060531 aaaaataatttgactttattttattttttgttatagaaatagc 49060489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 497 - 558
Target Start/End: Complemental strand, 2013275 - 2013214
Alignment:
Q  497 gaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagata 558  Q
    |||| |||||||||| ||||||| |||| | ||||| | |||||||||| ||||||||||||    
T  2013275 gaaacaacttatgacttgtccatcaactgtcttcaatttatttccataatcacttcaagata 2013214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 517
Target Start/End: Original strand, 2727290 - 2727367
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcc 517  Q
    |||||||| |||||||||||| |||||||| | | |   |||||||||||||||||| |||||  ||| |||||||||    
T  2727290 ttatttgaacttatctactgacataagcacgtgtcaatttgtttgagagagcttatgaaaataggttacgacatgtcc 2727367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 531
Target Start/End: Original strand, 12834916 - 12834985
Alignment:
Q  462 ataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    |||||||| | | |||||| |||  |||| ||||||||| | ||||||||||||||||||||| ||||||    
T  12834916 ataagcacttctgagactgattggtagagattatggaaacagcttatgacatgtccataaactgttttca 12834985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 524
Target Start/End: Original strand, 20547321 - 20547406
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaact 524  Q
    ||||||| || ||||||| ||| |||| ||| | | | |||||||||||||||||||||| | | | ||||||||||| |||||||    
T  20547321 cttattttagtttatctaatgacataaacacttgtgatactgtttgagagagcttatggagacagcctatgacatgtcgataaact 20547406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 524
Target Start/End: Complemental strand, 25422429 - 25422380
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataaact 524  Q
    |||||||||| ||||||||||||||| | ||||||||||||  |||||||    
T  25422429 agactgtttgggagagcttatggaaacaccttatgacatgtttataaact 25422380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 521
Target Start/End: Original strand, 33645937 - 33645974
Alignment:
Q  484 gagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  33645937 gagagagcttatggaaacaacttatgacatgtctataa 33645974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 521
Target Start/End: Original strand, 39568308 - 39568337
Alignment:
Q  492 ttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||||||||||||||||||||||    
T  39568308 ttatggaaataacttatgacatgtccataa 39568337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 559
Target Start/End: Original strand, 44151405 - 44151531
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataa----cttatgacatgtccataaactattttcaa 532  Q
    ||||||||||| ||||| |||||| ||||| || | | ||| | |||||||||||||||| ||| ||     |||||||||||||||||  | ||||||     
T  44151405 gacttatttgaacttatatactgacataagtacttgtgagattatttgagagagcttatgaaaacaatttttttatgacatgtccataagatgttttcag 44151504  T
Q  533 atgatttccataagcacttcaagatag 559  Q
     | ||||||||||||  ||||||||||    
T  44151505 cttatttccataagcttttcaagatag 44151531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 487 - 532
Target Start/End: Complemental strand, 44687021 - 44686976
Alignment:
Q  487 agagcttatggaaataacttatgacatgtccataaactattttcaa 532  Q
    |||||||||||||| |||||||||||||||||| | || |||||||    
T  44687021 agagcttatggaaacaacttatgacatgtccatgagctgttttcaa 44686976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 4e-16; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 475 - 559
Target Start/End: Complemental strand, 37273237 - 37273153
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 559  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||  | ||||||| | |||||||||||  || ||||||||    
T  37273237 agactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatag 37273153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 427 - 542
Target Start/End: Original strand, 52323813 - 52323928
Alignment:
Q  427 tgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactat 526  Q
    ||||||||  |||||| ||||| | ||||||| | |||||||| |  ||||||||||| |||||||||| ||||||| |||||||| |||||||| || |    
T  52323813 tgtttagattgacttaattgagttgatctactaacataagcacttgcaagactgtttgtgagagcttattgaaataatttatgacacgtccataagctgt 52323912  T
Q  527 tttcaaatgatttcca 542  Q
    |||||| | |||||||    
T  52323913 tttcaacttatttcca 52323928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 438 - 524
Target Start/End: Original strand, 21872225 - 21872311
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaact 524  Q
    |||||||||| |||||||||||| |||||||| | | ||||||||||  | ||||| || ||||| |||||||||||||||||||||    
T  21872225 acttatttgatcttatctactgacataagcacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccataaact 21872311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 437 - 529
Target Start/End: Original strand, 25182919 - 25183008
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 529  Q
    |||||||||||||||| |||||   ||||| || | | |||||||||||||||||||||| ||| |||||||||||| ||||||| |||||||    
T  25182919 gacttatttgagcttacctact---ataagaacttgtgagactgtttgagagagcttatgaaaacaacttatgacatatccataagctatttt 25183008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 450 - 547
Target Start/End: Original strand, 20192548 - 20192645
Alignment:
Q  450 ttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 547  Q
    ||||||| ||| |||||||| | | | ||||| ||||||||||||| |||| | |||||||||||||||||| || ||||||| | ||||||||||||    
T  20192548 ttatctattgacataagcacttcttacactgtatgagagagcttatagaaacagcttatgacatgtccataagctgttttcaactcatttccataagc 20192645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 439 - 500
Target Start/End: Complemental strand, 22667542 - 22667481
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 500  Q
    |||||||||||||||||||||| |||||||| | | |||||||||||||||| |||||||||    
T  22667542 cttatttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaa 22667481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 439 - 500
Target Start/End: Complemental strand, 22724181 - 22724120
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 500  Q
    |||||||||||||||||||||| |||||||| | | |||||||||||||||| |||||||||    
T  22724181 cttatttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaa 22724120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 562
Target Start/End: Original strand, 49465909 - 49465990
Alignment:
Q  481 tttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatagatt 562  Q
    |||| |||||||||| |||| |||||||||||||||||| |||||||||||| | |||||||||| | ||| | ||||||||    
T  49465909 tttgtgagagcttatagaaacaacttatgacatgtccatgaactattttcaacttatttccataaactctttaggatagatt 49465990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 439 - 531
Target Start/End: Complemental strand, 24624349 - 24624257
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    |||| |||| |||||||||| | || ||||| | ||||||||||||  |||||||||| ||| | ||||||||||||||||||||| ||||||    
T  24624349 cttagttgaacttatctactcacattagcacttgtaagactgtttggaagagcttatgaaaacagcttatgacatgtccataaactgttttca 24624257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 441 - 559
Target Start/End: Original strand, 33965421 - 33965540
Alignment:
Q  441 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca-aatgattt 539  Q
    ||||||||||||||||||||  ||| ||||| | |||||||||  |||| |||||||||||| | ||||||||| ||||||  ||||||||   |  |||    
T  33965421 tatttgagcttatctactgacttaaacacatgtgagactgtttaggagaccttatggaaatagcatatgacatgcccataagttattttcagcttttttt 33965520  T
Q  540 ccataagcacttcaagatag 559  Q
    |||||||| |||||||||||    
T  33965521 ccataagctcttcaagatag 33965540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 442 - 500
Target Start/End: Original strand, 11041160 - 11041218
Alignment:
Q  442 atttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 500  Q
    ||||||||||||||||| |||||||||| | |  |||||||||||||||||||||||||    
T  11041160 atttgagcttatctactaagataagcacttgtgggactgtttgagagagcttatggaaa 11041218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 508
Target Start/End: Complemental strand, 50211875 - 50211805
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttat 508  Q
    |||||||| |||||||||||| | |||||||| | ||||||||||||||||| |||||| ||| |||||||    
T  50211875 acttattttagcttatctactaacataagcacttgtaagactgtttgagagaacttatgaaaacaacttat 50211805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 426 - 531
Target Start/End: Original strand, 36646300 - 36646405
Alignment:
Q  426 ttgtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaacta 525  Q
    |||||| || |||||||||| ||| |||||| ||  ||| |||| | ||||||| |||| |||||||||||||||  ||||||| ||||||||||| ||     
T  36646300 ttgtttggatcgacttatttaagcatatctattggcataggcacttgtaagactatttgggagagcttatggaaaccacttatggcatgtccataagctg 36646399  T
Q  526 ttttca 531  Q
    ||||||    
T  36646400 ttttca 36646405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 440 - 521
Target Start/End: Complemental strand, 41724350 - 41724269
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||| |||||||||||| ||||| || | | |||| ||||| || | |||||||||| ||||||||||||||||||||    
T  41724350 ttatttgaacttatctactgacataagtacttgtcagacagtttgtgaaaacttatggaaacaacttatgacatgtccataa 41724269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 437 - 516
Target Start/End: Original strand, 11039707 - 11039786
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtc 516  Q
    ||||||| |||||||| ||||| |||||| ||||| |||| |||||||||||||| | |||||| |||| || |||||||    
T  11039707 gacttatctgagcttagctactaagataaacacatgtaaggctgtttgagagagcatttggaaacaactaataacatgtc 11039786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 428 - 521
Target Start/End: Complemental strand, 24281197 - 24281104
Alignment:
Q  428 gtttagaccgacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||  ||||||||||||  |||||||||  |||||||| | |  || |||||||||||||||||| ||| ||||||||| || |||||||    
T  24281197 gtttagattgacttatttgagtctatctactggtataagcacttgtgtgattgtttgagagagcttatgaaaacaacttatgatatctccataa 24281104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 437 - 514
Target Start/End: Original strand, 40880877 - 40880954
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatg 514  Q
    ||||||||| |||||||||| ||| || | || |  | |||||||||||||||||||||| ||| |||||||||||||    
T  40880877 gacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 40880954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 1810080 - 1810036
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccat 519  Q
    ||||| |||||||||||||| ||||| ||||||||||||||||||    
T  1810080 agactatttgagagagcttacggaaacaacttatgacatgtccat 1810036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 439 - 507
Target Start/End: Original strand, 24158447 - 24158515
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataactta 507  Q
    ||||||| |||||||||||||| ||||| || | | | |||||||| ||||||||||||||| ||||||    
T  24158447 cttatttaagcttatctactgacataagtacttgtgaaactgtttgcgagagcttatggaaacaactta 24158515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 440 - 512
Target Start/End: Complemental strand, 27793010 - 27792938
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgaca 512  Q
    ||||||||||||||||| ||| |||| ||||  | ||||||||||| |||| ||||||||||| ||| |||||    
T  27793010 ttatttgagcttatctattgacataaacacacgtgagactgtttgatagagtttatggaaatagcttttgaca 27792938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 437 - 521
Target Start/End: Complemental strand, 36200237 - 36200153
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||||||||||||| ||| |  ||||| | | ||| |||| ||||||| || || ||| ||||||||||||||||||||    
T  36200237 gacttatttgagcttatctaatgaaaacagcacttgtgagaatgttggagagagtttttgtaaacaacttatgacatgtccataa 36200153  T

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Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 441 - 521
Target Start/End: Complemental strand, 37155138 - 37155058
Alignment:
Q  441 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||| ||||||| | |||| ||  | | |||||||| || |||| ||||||||||||||||| ||||||||||||    
T  37155138 tatttgagctaatctacttacataaacatttgtgagactgttcgaaagagtttatggaaataacttattacatgtccataa 37155058  T

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Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 441 - 521
Target Start/End: Complemental strand, 37200493 - 37200413
Alignment:
Q  441 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||| ||||||| | |||| ||  | | |||||||| || |||| ||||||||||||||||| ||||||||||||    
T  37200493 tatttgagctaatctacttacataaacatttgtgagactgttcgaaagagtttatggaaataacttattacatgtccataa 37200413  T

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Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 444 - 515
Target Start/End: Complemental strand, 50004787 - 50004715
Alignment:
Q  444 ttgagcttatctactgagataagcacatataagactgtttgagagagc-ttatggaaataacttatgacatgt 515  Q
    ||||| |||| |||||| |||||||  | |||||||||||||||| || ||||||||| ||||||||||||||    
T  50004787 ttgagtttatttactgacataagcaattgtaagactgtttgagagggccttatggaaacaacttatgacatgt 50004715  T

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Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 515
Target Start/End: Original strand, 2606278 - 2606317
Alignment:
Q  476 gactgtttgagagagcttatggaaataacttatgacatgt 515  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  2606278 gactgtttgagagatcttatggaaacaacttatgacatgt 2606317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 515
Target Start/End: Original strand, 10540425 - 10540500
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 515  Q
    ||||||||| ||||||| | | |||||||| ||| ||||| |||  ||||||||||||||| || |||||||||||    
T  10540425 ttatttgagtttatctattcacataagcacttatcagactctttaggagagcttatggaaacaatttatgacatgt 10540500  T

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Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 521
Target Start/End: Original strand, 14598523 - 14598566
Alignment:
Q  478 ctgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||    
T  14598523 ctgtttgggggagtttatggaaataacttatgacatgtccataa 14598566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 521
Target Start/End: Original strand, 42817192 - 42817235
Alignment:
Q  478 ctgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||||||||||||||| | | ||||||||||||||||    
T  42817192 ctgtttgagagagcttatggaaacagcatatgacatgtccataa 42817235  T

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Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 475 - 521
Target Start/End: Original strand, 11039306 - 11039352
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||| |||||||||||||| |  |||||||||||||||||    
T  11039306 agactgtttgaaagagcttatggaaacatattatgacatgtccataa 11039352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 475 - 521
Target Start/End: Complemental strand, 21574593 - 21574547
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||| ||||||||||| ||| |||||||||||||| |||||    
T  21574593 agactgtttgggagagcttatgaaaacaacttatgacatgttcataa 21574547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 437 - 547
Target Start/End: Complemental strand, 26603334 - 26603224
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    |||| ||||||  ||| ||||||  |||||||||| | ||| ||||||   ||||| ||||||| |||||||||||||||||||   || |||||| | |    
T  26603334 gactgatttgaatttacctactgtcataagcacatgtgagattgtttggtggagctcatggaaacaacttatgacatgtccatattttaatttcaactta 26603235  T
Q  537 tttccataagc 547  Q
    |||||||||||    
T  26603234 tttccataagc 26603224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 479 - 521
Target Start/End: Complemental strand, 31403117 - 31403075
Alignment:
Q  479 tgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||    
T  31403117 tgtttgagagagcttatggaaacaacttattacatgtctataa 31403075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 475 - 521
Target Start/End: Original strand, 49772635 - 49772681
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||  ||||||||||||||| ||||||||| ||||||||||    
T  49772635 agactgtttaggagagcttatggaaacaacttatgagatgtccataa 49772681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 589 - 630
Target Start/End: Complemental strand, 1395661 - 1395620
Alignment:
Q  589 aaaataacttgactttattttatgttttattatagaaatagc 630  Q
    ||||||| ||||||||||||||| |||| |||||||||||||    
T  1395661 aaaataatttgactttattttatcttttgttatagaaatagc 1395620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 496
Target Start/End: Original strand, 25699129 - 25699186
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatg 496  Q
    |||||||||| ||||||| ||| |||||||| ||| |||||  |||||||||||||||    
T  25699129 cttatttgagtttatctattgacataagcacttatgagacttcttgagagagcttatg 25699186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 450 - 547
Target Start/End: Complemental strand, 43115184 - 43115087
Alignment:
Q  450 ttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 547  Q
    ||||||| ||| |||| ||| | | ||| ||||||  |||| ||||||||| ||||||||||||||||||||  | ||||||  | ||||||||||||    
T  43115184 ttatctattgacataatcacttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataagc 43115087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 449 - 518
Target Start/End: Original strand, 53735913 - 53735982
Alignment:
Q  449 cttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 518  Q
    ||||| |||||| |||| |||  || ||| ||||||||||| ||||| |||| |||||||||||||||||    
T  53735913 cttatttactgacataaacactaatgagattgtttgagagaacttattgaaacaacttatgacatgtcca 53735982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 439 - 529
Target Start/End: Complemental strand, 1662712 - 1662622
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 529  Q
    ||||||||||||||||||||   ||||| ||||   ||||| |||| ||||||||| ||||| ||||||||||||||||||||| ||||||    
T  1662712 cttatttgagcttatctactagcataagtacatgcgagactatttgcgagagcttacggaaacaacttatgacatgtccataaaatatttt 1662622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 437 - 547
Target Start/End: Original strand, 30259415 - 30259525
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    |||||||||||| ||| |||| |  |||| ||||| |||| |||||||| ||||||||| |||| |||||| |||||||| ||||| | ||||||| | |    
T  30259415 gacttatttgagtttacctaccggcataaacacatttaaggctgtttgaaagagcttatagaaacaacttacgacatgtcaataaattgttttcaactta 30259514  T
Q  537 tttccataagc 547  Q
    |||||||||||    
T  30259515 tttccataagc 30259525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 437 - 546
Target Start/End: Original strand, 5591896 - 5592004
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    |||||||||||||||||||||||  |||||||  | || ||||||||||||||||||||| ||| | ||||||||| || ||||| |  ||||||| | |    
T  5591896 gacttatttgagcttatctactggtataagcatgtgta-gactgtttgagagagcttatgaaaacagcttatgacacgtgcataagccgttttcaattta 5591994  T
Q  537 tttccataag 546  Q
    ||||||||||    
T  5591995 tttccataag 5592004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 437 - 518
Target Start/End: Original strand, 23373242 - 23373323
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 518  Q
    ||||||||||| ||| |||||||| |||||||| | | ||| |||||| |||||||||| |||| |||||||||||||||||    
T  23373242 gacttatttgaacttgtctactgatataagcacttgtgagattgtttgggagagcttatagaaacaacttatgacatgtcca 23373323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 439 - 531
Target Start/End: Complemental strand, 15581393 - 15581301
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    ||||||| |||||||||||||| |||||||| | | ||| ||||||  |||||| ||||||| ||||||||||||||| |||| || ||||||    
T  15581393 cttattttagcttatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtctataagctgttttca 15581301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 439 - 522
Target Start/End: Original strand, 4549472 - 4549555
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaa 522  Q
    |||||||||| ||||||||||  |||||||  | | |||||||||| |||||||||| |||| ||||||||||||||| |||||    
T  4549472 cttatttgagattatctactggcataagcatttctgagactgtttgggagagcttatagaaacaacttatgacatgtctataaa 4549555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 38867799 - 38867842
Alignment:
Q  476 gactgtttgagagagcttatggaaataacttatgacatgtccat 519  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  38867799 gactgtttgagagagcttatggaaataacttatgatatgtccat 38867842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 447 - 521
Target Start/End: Complemental strand, 44422830 - 44422756
Alignment:
Q  447 agcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||||| ||||| ||| | | ||||||| || ||||||||||| ||||| ||||||||||||||||||    
T  44422830 agcttatctactgggataaacacttttgagactgtctgggagagcttatgaaaatagcttatgacatgtccataa 44422756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 481 - 530
Target Start/End: Original strand, 11560535 - 11560584
Alignment:
Q  481 tttgagagagcttatggaaataacttatgacatgtccataaactattttc 530  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||||    
T  11560535 tttgatagagcttatggaaacaacttatgacatatccataaactattttc 11560584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 437 - 545
Target Start/End: Original strand, 3597210 - 3597318
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    |||||||||||| ||||||| ||| |||| ||| | | ||||||||||  |||| | ||  ||||||||||||||||| |||||| |||||||||  | |    
T  3597210 gacttatttgaggttatctaatgatataaccacttgtgagactgtttggaagagttgataaaaataacttatgacatggccataagctattttcagctta 3597309  T
Q  537 tttccataa 545  Q
    |||||||||    
T  3597310 tttccataa 3597318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 441 - 521
Target Start/End: Original strand, 32515374 - 32515454
Alignment:
Q  441 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||| ||||||||| | |||||||| | | |||||||||| ||||||||||||||| | | ||||||||||| ||||    
T  32515374 tatttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataa 32515454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 437 - 520
Target Start/End: Original strand, 4033946 - 4034029
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 520  Q
    |||| |||||| ||| |||||||  |||| ||| | | ||| |||||||||||||||||| |||||||||||||| ||||||||    
T  4033946 gactcatttgaacttgtctactggcataaacacttgtgagattgtttgagagagcttatgaaaataacttatgacttgtccata 4034029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 474 - 521
Target Start/End: Complemental strand, 15579586 - 15579539
Alignment:
Q  474 aagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  15579586 aagactgtttgggagagcttgtggaaacaacttatgacatgtccataa 15579539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 437 - 496
Target Start/End: Complemental strand, 27807256 - 27807197
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatg 496  Q
    ||||||||||| ||| |||||||| |||||||  | ||||||||||||||||||||||||    
T  27807256 gacttatttgaacttttctactgacataagcatttgtaagactgtttgagagagcttatg 27807197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 439 - 562
Target Start/End: Original strand, 31517671 - 31517794
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatt 538  Q
    ||||||||||||||| |||||  |||||||| | | |||||||||| |||| |||||  ||| |||| ||||||||| ||||| || ||||||  | |||    
T  31517671 cttatttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttatt 31517770  T
Q  539 tccataagcacttcaagatagatt 562  Q
    | ||||||| || ||||| |||||    
T  31517771 ttcataagctctccaagacagatt 31517794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 437 - 559
Target Start/End: Original strand, 12564428 - 12564550
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    ||||||||||||||||| |||||| |||||||| | |  ||||||||| ||||||||| | | ||| ||||||||| ||| ||||  | ||||||  | |    
T  12564428 gacttatttgagcttatatactgatataagcacttgtgtgactgtttgggagagcttacgtatatagcttatgacaagtcaataagttgttttcagctta 12564527  T
Q  537 tttccataagcacttcaagatag 559  Q
    ||||||||||  || ||||||||    
T  12564528 tttccataagttctccaagatag 12564550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 437 - 515
Target Start/End: Complemental strand, 28467574 - 28467496
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 515  Q
    |||||||||||| |||| ||||   || ||||| ||| ||||| |||| ||||| ||||||||||||||||||||||||    
T  28467574 gacttatttgagtttatttactagcattagcacttatgagactatttgggagagattatggaaataacttatgacatgt 28467496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 521
Target Start/End: Complemental strand, 43420397 - 43420315
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||||||||||| || |||| ||| | | |||||| ||| |||| |||||||||| | |||||||||||| |||||    
T  43420397 cttatttgagcttatctacagacataaacacttgtgagactgcttgtgagatcttatggaaacagcttatgacatgttcataa 43420315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 529
Target Start/End: Original strand, 14737658 - 14737747
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 529  Q
    |||||||||||||| ||||   |||||||| | | |||||||||| || | ||| || ||||||||||| |||||||||||| |||||||    
T  14737658 ttatttgagcttatttactagaataagcacttgtgagactgtttgggaaaacttgtgaaaataacttataacatgtccataagctatttt 14737747  T

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Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 485 - 526
Target Start/End: Original strand, 17631079 - 17631120
Alignment:
Q  485 agagagcttatggaaataacttatgacatgtccataaactat 526  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  17631079 agagagcttatggaaacaacttatgacatgtccataagctat 17631120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 23407534 - 23407489
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccata 520  Q
    ||||||| ||||||||||||| |||||| |||||||||||||||||    
T  23407534 agactgtctgagagagcttattgaaatagcttatgacatgtccata 23407489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 513
Target Start/End: Complemental strand, 26679492 - 26679419
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacat 513  Q
    ||||||||||||||||||||  || |||||   |||||| ||||| ||||||||||||||| | ||||||||||    
T  26679492 ttatttgagcttatctactgtcattagcactggtaagacagtttgcgagagcttatggaaaaatcttatgacat 26679419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 437 - 550
Target Start/End: Complemental strand, 29723630 - 29723517
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    |||| |||||||||||| ||||   |||||||| | | | || |||||| ||| || ||||||| | ||||||||||||||||||||| ||||||| | |    
T  29723630 gactaatttgagcttatttactagcataagcacttgtgatacagtttgaaagaactaatggaaacagcttatgacatgtccataaactgttttcaactta 29723531  T
Q  537 tttccataagcact 550  Q
    ||| ||||| ||||    
T  29723530 tttacataaccact 29723517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 453 - 558
Target Start/End: Original strand, 44031944 - 44032049
Alignment:
Q  453 tctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttc 552  Q
    |||||||  |||||||| | | ||||||| |  ||||||||||| ||  | || ||||||||||||||| |||||||||  | |||||||||||| ||||    
T  44031944 tctactgtcataagcacttgttagactgtctaggagagcttatgtaagcagctaatgacatgtccataagctattttcagctaatttccataagctcttc 44032043  T
Q  553 aagata 558  Q
    ||||||    
T  44032044 aagata 44032049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 531
Target Start/End: Complemental strand, 45327720 - 45327627
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    ||||||| ||||||||||||||  |  ||||| | | |||||  ||| | ||||||||||||| ||||||||||||||||||||| | ||||||    
T  45327720 acttattggagcttatctactggcacgagcacttgtgagactagttgggggagcttatggaaacaacttatgacatgtccataaattgttttca 45327627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 49692019 - 49692064
Alignment:
Q  475 agactgtttgagagagcttatggaaataacttatgacatgtccata 520  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||    
T  49692019 agactgtttgagagaacttatgaaaatagcttatgacatgtccata 49692064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 437 - 521
Target Start/End: Original strand, 10199337 - 10199421
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||||||||||||||| | |||||||| | | | ||| |||| |||| || ||| ||||| |||||||||||| |||||    
T  10199337 gacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatgacatgttcataa 10199421  T

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Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 438 - 531
Target Start/End: Complemental strand, 17628735 - 17628646
Alignment:
Q  438 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    ||||||| ||||||| ||||||| | |||||| | | |||||||| |||    |||||||||| |||||||||||||||||||| || ||||||    
T  17628735 acttattggagcttacctactgacacaagcacttgtgagactgttggag----cttatggaaacaacttatgacatgtccataagctgttttca 17628646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 437 - 521
Target Start/End: Complemental strand, 27140619 - 27140535
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    ||||||| |||||||||||| ||| |||| ||  | |||| || |||||||||| ||| ||||| | ||||||||||||||||||    
T  27140619 gacttatatgagcttatctattgacataaacaattgtaagtctctttgagagagtttaaggaaacagcttatgacatgtccataa 27140535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 437 - 513
Target Start/End: Original strand, 51929391 - 51929467
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacat 513  Q
    ||||| |||||||||||||||||| |||||||| | | | ||||||| ||||| |||||| ||| | ||||||||||    
T  51929391 gacttttttgagcttatctactgacataagcacctgtgacactgtttaagagaacttatgaaaacagcttatgacat 51929467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 547
Target Start/End: Complemental strand, 4868537 - 4868431
Alignment:
Q  440 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgattt 539  Q
    ||||||||  ||||||| ||| ||| |||| | | |||||||||||||||| |||| |||| ||||||||||||||| ||||  | ||||||| | ||||    
T  4868537 ttatttgaatttatctattgacataggcacttgtgagactgtttgagagagtttat-gaaacaacttatgacatgtcaataagttgttttcaacttattt 4868439  T
Q  540 ccataagc 547  Q
     |||||||    
T  4868438 acataagc 4868431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 500
Target Start/End: Complemental strand, 6279540 - 6279477
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 500  Q
    ||||||||| |||||| ||||||| |||||||| | |  | |||||||||||||||||||||||    
T  6279540 gacttatttcagcttaactactgacataagcacttgtgtggctgtttgagagagcttatggaaa 6279477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 547
Target Start/End: Complemental strand, 15515635 - 15515572
Alignment:
Q  484 gagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 547  Q
    ||||||| ||||| ||| ||||||||||||||| |||  |||||||||| | ||||||||||||    
T  15515635 gagagagtttatgaaaacaacttatgacatgtcaatacgctattttcaatttatttccataagc 15515572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 524
Target Start/End: Complemental strand, 16980944 - 16980857
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaact 524  Q
    ||||||||||| ||||| |||  | ||||| || | | ||||| |||||||||||||||||||| |||||| ||||| | ||||||||    
T  16980944 gacttatttgaacttatataccaacataagtacttgtgagactatttgagagagcttatggaaacaacttacgacattttcataaact 16980857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 466
Target Start/End: Original strand, 33204313 - 33204352
Alignment:
Q  427 tgtttagaccgacttatttgagcttatctactgagataag 466  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  33204313 tgtttagatcgacttatttgagcttatctactgacataag 33204352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 520
Target Start/End: Complemental strand, 34536299 - 34536216
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 520  Q
    ||||||||||| | |||||| ||| |||| ||| | | |||||||||||||  ||||||| ||| | |||||||||||||||||    
T  34536299 gacttatttgaacgtatctattgacataaacacttgtgagactgtttgagatggcttatgaaaacagcttatgacatgtccata 34536216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 521
Target Start/End: Original strand, 37941955 - 37941998
Alignment:
Q  478 ctgtttgagagagcttatggaaataacttatgacatgtccataa 521  Q
    |||||||||||||||||| |||| || |||||||||||||||||    
T  37941955 ctgtttgagagagcttatagaaacaatttatgacatgtccataa 37941998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 628
Target Start/End: Complemental strand, 45234187 - 45234148
Alignment:
Q  589 aaaataacttgactttattttatgttttattatagaaata 628  Q
    ||||||| ||||||||||||||| ||||||||||||||||    
T  45234187 aaaataatttgactttattttatcttttattatagaaata 45234148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 522
Target Start/End: Original strand, 49521776 - 49521819
Alignment:
Q  479 tgtttgagagagcttatggaaataacttatgacatgtccataaa 522  Q
    ||||||||||||||| |||||| |||||||||||||| ||||||    
T  49521776 tgtttgagagagcttgtggaaacaacttatgacatgttcataaa 49521819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 437 - 559
Target Start/End: Original strand, 37593613 - 37593735
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 536  Q
    ||||||||||||||||| |||||  |||| ||| | | |||||||||| || | || ||| | | |||||||||||||| ||||| || ||||||  | |    
T  37593613 gacttatttgagcttatatactggcataaacacttgttagactgtttgggaaaactaatgaacacaacttatgacatgttcataagctgttttcagctta 37593712  T
Q  537 tttccataagcacttcaagatag 559  Q
    ||| ||||||| |||||| ||||    
T  37593713 ttttcataagctcttcaaaatag 37593735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 477 - 543
Target Start/End: Complemental strand, 37811953 - 37811887
Alignment:
Q  477 actgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccat 543  Q
    |||| |||||||| |||||| ||| | |||||||||||| |||||||| ||||||| | ||||||||    
T  37811953 actggttgagagaacttatgaaaacagcttatgacatgttcataaactgttttcaacttatttccat 37811887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 510
Target Start/End: Complemental strand, 5157213 - 5157140
Alignment:
Q  437 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatga 510  Q
    ||||||||||| ||||||||| || |||| ||| | | | |||||||| |||||||||| |||| |||||||||    
T  5157213 gacttatttgaacttatctacggacataaacacttgtgaaactgtttgggagagcttatagaaacaacttatga 5157140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 424 - 469
Target Start/End: Complemental strand, 6292646 - 6292601
Alignment:
Q  424 gtttgtttagaccgacttatttgagcttatctactgagataagcac 469  Q
    |||||||| ||  |||||||||||||||||||||||| ||||||||    
T  6292646 gtttgtttggattgacttatttgagcttatctactgacataagcac 6292601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 486 - 531
Target Start/End: Complemental strand, 27145634 - 27145589
Alignment:
Q  486 gagagcttatggaaataacttatgacatgtccataaactattttca 531  Q
    ||||||||||||||| | ||||||||||||||||||  ||||||||    
T  27145634 gagagcttatggaaaaagcttatgacatgtccataagttattttca 27145589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 589 - 630
Target Start/End: Complemental strand, 50319282 - 50319241
Alignment:
Q  589 aaaataacttgactttattttatgttttattatagaaatagc 630  Q
    |||| |||||||||||||||||| |||| |||||||||||||    
T  50319282 aaaacaacttgactttattttatcttttgttatagaaatagc 50319241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 443 - 514
Target Start/End: Complemental strand, 27711 - 27640
Alignment:
Q  443 tttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatg 514  Q
    |||||||| ||||||||| ||| | || | | |||||||||| ||||||||||||||||| |||||||||||    
T  27711 tttgagctgatctactgacatatgtacttctgagactgtttgggagagcttatggaaatagcttatgacatg 27640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 439 - 509
Target Start/End: Original strand, 4154 - 4224
Alignment:
Q  439 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatg 509  Q
    ||||||||||||| |||||||| |||||||| | | ||  |||||| ||||| ||||||||| ||||||||    
T  4154 cttatttgagcttgtctactgacataagcacttgtgagcttgtttgtgagagtttatggaaacaacttatg 4224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 450 - 555
Target Start/End: Original strand, 10559 - 10664
Alignment:
Q  450 ttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcac 549  Q
    |||| |||||| ||||| || | | ||||||||||| | |||||||| ||| |||| |||||||||||||||  | ||||||  | |||||||||| |||    
T  10559 ttatgtactgacataagtacttgtgagactgtttgacaaagcttatgtaaacaactaatgacatgtccataagttgttttcagcttatttccataaacac 10658  T
Q  550 ttcaag 555  Q
    | ||||    
T  10659 tacaag 10664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 521
Target Start/End: Complemental strand, 38678 - 38649
Alignment:
Q  492 ttatggaaataacttatgacatgtccataa 521  Q
    ||||||||||||||||||||||||||||||    
T  38678 ttatggaaataacttatgacatgtccataa 38649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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