View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13028_low_6 (Length: 370)

Name: NF13028_low_6
Description: NF13028
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13028_low_6
NF13028_low_6
[»] chr5 (51 HSPs)
chr5 (18-317)||(25556876-25557174)
chr5 (25-319)||(18695015-18695309)
chr5 (25-325)||(245607-245907)
chr5 (41-317)||(16900996-16901272)
chr5 (25-246)||(26639108-26639330)
chr5 (25-313)||(40428642-40428930)
chr5 (82-318)||(31055313-31055550)
chr5 (18-318)||(38408633-38408933)
chr5 (83-319)||(16307474-16307712)
chr5 (82-317)||(19169411-19169648)
chr5 (82-246)||(36641211-36641376)
chr5 (83-317)||(10379351-10379585)
chr5 (25-234)||(17704670-17704875)
chr5 (85-246)||(38476541-38476703)
chr5 (25-246)||(23765462-23765682)
chr5 (25-246)||(23815310-23815530)
chr5 (98-246)||(17825568-17825716)
chr5 (25-248)||(10293156-10293378)
chr5 (98-242)||(37961323-37961468)
chr5 (97-318)||(7835794-7836014)
chr5 (84-246)||(41663594-41663756)
chr5 (85-246)||(34125130-34125293)
chr5 (97-246)||(2373229-2373378)
chr5 (38-246)||(35301986-35302193)
chr5 (97-226)||(15885256-15885384)
chr5 (84-229)||(23040039-23040182)
chr5 (82-243)||(462835-462996)
chr5 (98-226)||(7187274-7187401)
chr5 (25-151)||(8645808-8645935)
chr5 (202-318)||(31648173-31648290)
chr5 (18-173)||(32465979-32466132)
chr5 (136-220)||(20732628-20732713)
chr5 (148-220)||(38322335-38322408)
chr5 (18-132)||(31648060-31648174)
chr5 (136-220)||(18739837-18739923)
chr5 (136-246)||(8673928-8674038)
chr5 (140-205)||(16287612-16287678)
chr5 (136-220)||(38545373-38545459)
chr5 (138-217)||(36954471-36954551)
chr5 (159-213)||(28538515-28538569)
chr5 (209-246)||(8645946-8645983)
chr5 (98-196)||(20653905-20654003)
chr5 (84-159)||(23040196-23040272)
chr5 (258-318)||(38408627-38408687)
chr5 (25-72)||(16901008-16901055)
chr5 (149-188)||(24025188-24025227)
chr5 (149-220)||(42757595-42757668)
chr5 (27-72)||(10497382-10497427)
chr5 (25-62)||(31648240-31648277)
chr5 (261-317)||(26639286-26639342)
chr5 (36-72)||(37961270-37961306)
[»] chr2 (40 HSPs)
chr2 (25-318)||(18537827-18538121)
chr2 (25-316)||(15735075-15735367)
chr2 (25-318)||(30714273-30714567)
chr2 (25-246)||(11175918-11176140)
chr2 (37-246)||(38716217-38716426)
chr2 (27-316)||(9787573-9787861)
chr2 (25-316)||(9051028-9051320)
chr2 (25-319)||(2986697-2986993)
chr2 (25-318)||(15700758-15701052)
chr2 (27-318)||(6763715-6764008)
chr2 (27-313)||(25298804-25299091)
chr2 (25-246)||(22191057-22191278)
chr2 (111-316)||(17368314-17368518)
chr2 (25-194)||(4587871-4588042)
chr2 (82-318)||(25884176-25884413)
chr2 (85-243)||(22387141-22387300)
chr2 (84-246)||(28365581-28365743)
chr2 (82-319)||(36464342-36464578)
chr2 (101-246)||(4104895-4105040)
chr2 (98-246)||(26829160-26829308)
chr2 (84-221)||(2190605-2190741)
chr2 (98-226)||(331797-331926)
chr2 (98-226)||(14743402-14743531)
chr2 (136-208)||(15147835-15147908)
chr2 (149-220)||(2123511-2123583)
chr2 (155-318)||(21773331-21773493)
chr2 (101-177)||(1020478-1020554)
chr2 (140-217)||(35844843-35844922)
chr2 (140-220)||(11919772-11919854)
chr2 (136-209)||(19618881-19618956)
chr2 (259-318)||(22191044-22191103)
chr2 (140-217)||(22698947-22699026)
chr2 (149-212)||(36199581-36199644)
chr2 (84-146)||(43301725-43301787)
chr2 (136-217)||(28319106-28319188)
chr2 (82-123)||(15147813-15147854)
chr2 (258-319)||(15735061-15735122)
chr2 (36-72)||(11176153-11176189)
chr2 (118-178)||(21494555-21494615)
chr2 (28-72)||(25884192-25884236)
[»] chr7 (83 HSPs)
chr7 (18-314)||(13577789-13578084)
chr7 (18-317)||(11843177-11843477)
chr7 (18-316)||(31493915-31494214)
chr7 (25-319)||(21224351-21224645)
chr7 (25-246)||(3562504-3562725)
chr7 (25-317)||(27869195-27869488)
chr7 (18-318)||(48175960-48176262)
chr7 (37-317)||(20636642-20636923)
chr7 (25-325)||(19919595-19919894)
chr7 (25-318)||(24597515-24597808)
chr7 (37-317)||(19195213-19195494)
chr7 (27-246)||(41452320-41452540)
chr7 (27-317)||(42271346-42271637)
chr7 (82-316)||(35337523-35337758)
chr7 (37-317)||(8526819-8527099)
chr7 (25-246)||(17305775-17305998)
chr7 (25-246)||(36746574-36746795)
chr7 (25-243)||(2331025-2331243)
chr7 (18-246)||(18754337-18754566)
chr7 (25-229)||(14624619-14624818)
chr7 (97-319)||(10023783-10024004)
chr7 (84-246)||(4193621-4193783)
chr7 (32-245)||(44077942-44078157)
chr7 (98-317)||(39182020-39182238)
chr7 (25-246)||(26385274-26385494)
chr7 (18-246)||(10655334-10655562)
chr7 (105-319)||(24448042-24448256)
chr7 (104-246)||(15681720-15681863)
chr7 (37-185)||(20638514-20638663)
chr7 (98-246)||(26126339-26126487)
chr7 (97-245)||(21225621-21225767)
chr7 (84-246)||(3403122-3403286)
chr7 (84-246)||(19493391-19493551)
chr7 (25-317)||(25002722-25003010)
chr7 (136-246)||(5087118-5087229)
chr7 (41-246)||(33237485-33237689)
chr7 (121-246)||(9822171-9822296)
chr7 (121-246)||(10724096-10724221)
chr7 (98-246)||(24464660-24464809)
chr7 (136-246)||(6650632-6650743)
chr7 (82-199)||(4571461-4571578)
chr7 (98-225)||(3769489-3769616)
chr7 (26-246)||(7365233-7365456)
chr7 (98-227)||(3148008-3148137)
chr7 (133-318)||(42303266-42303452)
chr7 (82-226)||(23439661-23439807)
chr7 (85-197)||(5111512-5111623)
chr7 (118-225)||(39440212-39440320)
chr7 (140-246)||(5348153-5348261)
chr7 (136-220)||(38722900-38722986)
chr7 (98-246)||(21264127-21264276)
chr7 (98-226)||(23461112-23461241)
chr7 (82-191)||(9157176-9157284)
chr7 (98-246)||(43251349-43251499)
chr7 (101-213)||(47113202-47113315)
chr7 (98-157)||(6798074-6798133)
chr7 (136-217)||(14196923-14197006)
chr7 (98-226)||(23473074-23473203)
chr7 (139-217)||(9154398-9154478)
chr7 (150-220)||(46267343-46267414)
chr7 (180-226)||(1921042-1921088)
chr7 (168-246)||(15093822-15093900)
chr7 (98-158)||(15681682-15681743)
chr7 (152-220)||(43516977-43517046)
chr7 (138-220)||(24730855-24730939)
chr7 (25-72)||(20636864-20636911)
chr7 (25-72)||(27869207-27869254)
chr7 (159-220)||(39296673-39296735)
chr7 (156-217)||(45782122-45782184)
chr7 (149-217)||(23373490-23373559)
chr7 (258-318)||(26385261-26385321)
chr7 (266-317)||(2331272-2331323)
chr7 (258-317)||(6650543-6650602)
chr7 (104-186)||(6798013-6798095)
chr7 (191-246)||(9157100-9157155)
chr7 (25-72)||(39182179-39182226)
chr7 (34-72)||(26385507-26385545)
chr7 (98-184)||(29051704-29051789)
chr7 (258-319)||(18754512-18754573)
chr7 (258-319)||(21690413-21690474)
chr7 (27-72)||(23373667-23373712)
chr7 (82-130)||(5348128-5348175)
chr7 (18-62)||(25002961-25003005)
[»] scaffold0025 (2 HSPs)
scaffold0025 (18-316)||(19289-19585)
scaffold0025 (37-246)||(61837-62049)
[»] chr3 (64 HSPs)
chr3 (27-318)||(26628023-26628316)
chr3 (25-317)||(8542621-8542915)
chr3 (25-246)||(48907363-48907584)
chr3 (25-319)||(4521965-4522259)
chr3 (25-316)||(8338940-8339233)
chr3 (25-317)||(3328812-3329106)
chr3 (25-316)||(27852753-27853044)
chr3 (25-318)||(13080905-13081200)
chr3 (93-316)||(28154882-28155106)
chr3 (100-318)||(34878527-34878746)
chr3 (27-245)||(23428691-23428910)
chr3 (25-319)||(25179589-25179882)
chr3 (32-318)||(28173727-28174015)
chr3 (18-246)||(30155216-30155443)
chr3 (25-318)||(22447738-22448037)
chr3 (82-319)||(22500593-22500831)
chr3 (27-315)||(40836181-40836469)
chr3 (82-246)||(25022734-25022899)
chr3 (26-246)||(10743421-10743640)
chr3 (35-234)||(3780904-3781099)
chr3 (25-246)||(46673118-46673339)
chr3 (25-317)||(26633360-26633648)
chr3 (136-318)||(32960643-32960823)
chr3 (25-317)||(33279585-33279877)
chr3 (34-317)||(20001731-20002012)
chr3 (25-246)||(22416344-22416567)
chr3 (136-313)||(6927593-6927770)
chr3 (83-226)||(26126997-26127139)
chr3 (83-246)||(26177027-26177189)
chr3 (25-246)||(36311163-36311384)
chr3 (82-246)||(46387652-46387809)
chr3 (97-234)||(48860786-48860924)
chr3 (98-246)||(23320446-23320593)
chr3 (136-234)||(3821004-3821103)
chr3 (98-318)||(1743334-1743555)
chr3 (82-221)||(9496312-9496451)
chr3 (98-314)||(32315004-32315219)
chr3 (98-246)||(33105026-33105174)
chr3 (93-236)||(35201076-35201218)
chr3 (97-246)||(31039048-31039197)
chr3 (82-200)||(4775919-4776038)
chr3 (156-226)||(43668571-43668641)
chr3 (148-245)||(20626794-20626891)
chr3 (84-244)||(25336427-25336587)
chr3 (149-220)||(32463516-32463588)
chr3 (140-220)||(24312760-24312843)
chr3 (83-246)||(49657864-49658013)
chr3 (164-217)||(36033738-36033791)
chr3 (149-216)||(9662347-9662415)
chr3 (258-318)||(36311150-36311209)
chr3 (25-72)||(8338951-8338998)
chr3 (101-218)||(34296445-34296564)
chr3 (156-217)||(2683091-2683153)
chr3 (18-67)||(20626755-20626804)
chr3 (39-130)||(32960798-32960889)
chr3 (149-220)||(48743228-48743302)
chr3 (33-72)||(20001954-20001993)
chr3 (25-72)||(26633372-26633418)
chr3 (101-167)||(34296529-34296596)
chr3 (84-146)||(18388871-18388933)
chr3 (258-319)||(25179575-25179636)
chr3 (25-62)||(40836191-40836228)
chr3 (82-126)||(3820983-3821026)
chr3 (258-318)||(40836424-40836484)
[»] chr1 (48 HSPs)
chr1 (18-317)||(24196265-24196566)
chr1 (82-316)||(19077926-19078160)
chr1 (82-316)||(19125816-19126050)
chr1 (25-316)||(3616810-3617102)
chr1 (25-317)||(4059521-4059815)
chr1 (25-320)||(46432212-46432509)
chr1 (25-246)||(24961964-24962186)
chr1 (97-315)||(48471864-48472083)
chr1 (99-318)||(27092851-27093070)
chr1 (25-246)||(24749808-24750031)
chr1 (18-315)||(43706655-43706953)
chr1 (18-318)||(2425229-2425529)
chr1 (25-246)||(28920727-28920944)
chr1 (83-246)||(29676148-29676312)
chr1 (18-318)||(51719121-51719420)
chr1 (82-315)||(16551645-16551880)
chr1 (25-246)||(2657584-2657804)
chr1 (98-246)||(47685186-47685334)
chr1 (84-245)||(29182072-29182234)
chr1 (98-234)||(4455125-4455262)
chr1 (98-318)||(16971935-16972156)
chr1 (84-246)||(2260449-2260611)
chr1 (25-246)||(18606755-18606976)
chr1 (85-246)||(31084683-31084844)
chr1 (36-246)||(22786053-22786260)
chr1 (85-314)||(26605281-26605507)
chr1 (82-246)||(9387761-9387929)
chr1 (85-246)||(21185278-21185436)
chr1 (149-246)||(9554272-9554369)
chr1 (149-218)||(16858466-16858536)
chr1 (84-160)||(21148048-21148126)
chr1 (187-246)||(21148121-21148180)
chr1 (136-208)||(18106817-18106891)
chr1 (83-226)||(28750346-28750490)
chr1 (140-218)||(23279691-23279772)
chr1 (82-184)||(10684861-10684965)
chr1 (136-220)||(28552412-28552499)
chr1 (25-72)||(48471874-48471921)
chr1 (159-226)||(6285266-6285334)
chr1 (149-197)||(36486315-36486363)
chr1 (25-72)||(4059533-4059580)
chr1 (25-72)||(28552316-28552363)
chr1 (34-72)||(14601738-14601776)
chr1 (267-317)||(24750024-24750074)
chr1 (18-72)||(24962199-24962253)
chr1 (18-72)||(50334722-50334776)
chr1 (258-314)||(28552307-28552363)
chr1 (258-318)||(28920897-28920957)
[»] scaffold0419 (2 HSPs)
scaffold0419 (25-316)||(2961-3253)
scaffold0419 (25-72)||(2972-3019)
[»] chr4 (60 HSPs)
chr4 (82-318)||(13826418-13826654)
chr4 (16-313)||(27018219-27018516)
chr4 (25-316)||(13397675-13397968)
chr4 (27-316)||(35475304-35475592)
chr4 (18-318)||(43793629-43793930)
chr4 (18-317)||(25011739-25012039)
chr4 (82-317)||(15058819-15059054)
chr4 (25-246)||(5304418-5304638)
chr4 (25-313)||(4357263-4357552)
chr4 (18-246)||(19232414-19232644)
chr4 (25-246)||(41877099-41877317)
chr4 (39-314)||(41034661-41034936)
chr4 (84-316)||(4098726-4098960)
chr4 (18-317)||(1588414-1588712)
chr4 (25-246)||(6789029-6789251)
chr4 (85-318)||(2931392-2931625)
chr4 (25-234)||(4433266-4433474)
chr4 (103-227)||(2715807-2715930)
chr4 (98-246)||(51291240-51291389)
chr4 (25-246)||(45633449-45633669)
chr4 (97-246)||(52838313-52838462)
chr4 (25-246)||(9195734-9195955)
chr4 (27-213)||(55780400-55780586)
chr4 (27-213)||(55844580-55844766)
chr4 (84-246)||(6209310-6209475)
chr4 (136-246)||(25618699-25618809)
chr4 (84-247)||(15734469-15734631)
chr4 (101-217)||(23362519-23362635)
chr4 (98-316)||(9397276-9397493)
chr4 (82-317)||(24626221-24626452)
chr4 (108-245)||(15795412-15795549)
chr4 (136-246)||(36729159-36729270)
chr4 (185-316)||(13394536-13394668)
chr4 (84-319)||(20919332-20919564)
chr4 (169-317)||(47869811-47869958)
chr4 (139-217)||(33978856-33978936)
chr4 (159-226)||(12101217-12101284)
chr4 (136-246)||(14804441-14804552)
chr4 (37-130)||(25618783-25618877)
chr4 (136-220)||(14612234-14612320)
chr4 (136-208)||(14784668-14784741)
chr4 (149-217)||(14857467-14857536)
chr4 (101-220)||(16291777-16291898)
chr4 (136-217)||(7540189-7540272)
chr4 (98-148)||(48158681-48158731)
chr4 (139-209)||(40259673-40259745)
chr4 (25-72)||(4357497-4357544)
chr4 (25-72)||(13826431-13826478)
chr4 (258-316)||(25011735-25011793)
chr4 (34-72)||(27018460-27018498)
chr4 (204-246)||(33621110-33621152)
chr4 (34-72)||(36729109-36729147)
chr4 (84-130)||(36729244-36729290)
chr4 (140-220)||(47645542-47645624)
chr4 (150-206)||(5931971-5932028)
chr4 (97-130)||(14784715-14784748)
chr4 (25-62)||(20919346-20919383)
chr4 (101-217)||(43336039-43336156)
chr4 (258-318)||(4433181-4433241)
chr4 (155-210)||(22057365-22057421)
[»] chr8 (37 HSPs)
chr8 (18-318)||(8802398-8802699)
chr8 (25-318)||(4518867-4519160)
chr8 (82-319)||(19391385-19391623)
chr8 (25-317)||(5192271-5192564)
chr8 (27-246)||(38630068-38630288)
chr8 (25-318)||(44146983-44147276)
chr8 (25-324)||(19924276-19924577)
chr8 (25-243)||(17648254-17648473)
chr8 (83-318)||(33895443-33895679)
chr8 (18-313)||(22452176-22452473)
chr8 (25-246)||(12723332-12723554)
chr8 (25-246)||(30784336-30784557)
chr8 (25-318)||(18881502-18881794)
chr8 (25-246)||(21666345-21666566)
chr8 (82-315)||(32400325-32400558)
chr8 (83-319)||(4807597-4807836)
chr8 (38-246)||(7117185-7117393)
chr8 (85-243)||(18252960-18253117)
chr8 (138-319)||(23565214-23565396)
chr8 (97-235)||(3208064-3208202)
chr8 (82-246)||(1824675-1824837)
chr8 (82-246)||(1859120-1859282)
chr8 (25-153)||(21929967-21930094)
chr8 (99-246)||(31268365-31268512)
chr8 (82-225)||(41688202-41688344)
chr8 (98-246)||(4423101-4423250)
chr8 (97-246)||(15869408-15869557)
chr8 (192-246)||(21929918-21929972)
chr8 (98-180)||(3380283-3380365)
chr8 (138-226)||(16233581-16233671)
chr8 (108-238)||(41385569-41385700)
chr8 (169-217)||(132538-132586)
chr8 (136-220)||(8137635-8137721)
chr8 (102-217)||(16236552-16236668)
chr8 (25-72)||(19392812-19392859)
chr8 (101-217)||(2053264-2053382)
chr8 (34-72)||(4423049-4423087)
[»] chr6 (47 HSPs)
chr6 (97-318)||(35102489-35102711)
chr6 (25-317)||(18791369-18791663)
chr6 (25-316)||(25819696-25819988)
chr6 (25-319)||(4597402-4597698)
chr6 (25-243)||(24603372-24603591)
chr6 (82-317)||(34833993-34834229)
chr6 (82-312)||(14572182-14572413)
chr6 (25-246)||(31210805-31211027)
chr6 (25-248)||(22269421-22269641)
chr6 (25-246)||(26710379-26710600)
chr6 (25-318)||(32451737-32452032)
chr6 (25-246)||(24051020-24051241)
chr6 (22-246)||(3118689-3118912)
chr6 (25-246)||(22968227-22968446)
chr6 (25-246)||(23819947-23820166)
chr6 (104-319)||(18749094-18749309)
chr6 (28-246)||(15298500-15298717)
chr6 (25-207)||(8412769-8412952)
chr6 (84-246)||(26240025-26240190)
chr6 (25-192)||(4013791-4013958)
chr6 (82-246)||(4370966-4371125)
chr6 (18-234)||(19282296-19282510)
chr6 (102-248)||(24615762-24615908)
chr6 (149-246)||(20863799-20863896)
chr6 (83-176)||(32682419-32682512)
chr6 (33-246)||(34528171-34528381)
chr6 (102-243)||(9241742-9241882)
chr6 (82-246)||(12427299-12427466)
chr6 (82-246)||(2636846-2637011)
chr6 (84-246)||(16415403-16415564)
chr6 (25-146)||(18749299-18749421)
chr6 (140-243)||(23124794-23124898)
chr6 (118-246)||(12291488-12291617)
chr6 (317-363)||(7644073-7644119)
chr6 (35-146)||(2058993-2059103)
chr6 (85-246)||(14195631-14195792)
chr6 (138-226)||(11661010-11661100)
chr6 (200-246)||(8414952-8414998)
chr6 (169-246)||(2058905-2058982)
chr6 (258-315)||(4013911-4013968)
chr6 (83-166)||(8149060-8149142)
chr6 (27-72)||(12291430-12291475)
chr6 (101-218)||(12293663-12293783)
chr6 (101-220)||(29365378-29365499)
chr6 (25-72)||(32451972-32452019)
chr6 (136-215)||(19176499-19176579)
chr6 (27-71)||(19176812-19176856)
[»] scaffold0406 (1 HSPs)
scaffold0406 (18-318)||(2001-2296)
[»] scaffold0607 (1 HSPs)
scaffold0607 (82-317)||(2047-2285)
[»] scaffold0087 (1 HSPs)
scaffold0087 (27-292)||(24988-25255)
[»] scaffold0062 (2 HSPs)
scaffold0062 (25-318)||(49670-49964)
scaffold0062 (25-318)||(62209-62503)
[»] scaffold0179 (1 HSPs)
scaffold0179 (25-319)||(5647-5942)
[»] scaffold0001 (2 HSPs)
scaffold0001 (25-246)||(142018-142239)
scaffold0001 (267-316)||(141945-141994)
[»] scaffold0150 (1 HSPs)
scaffold0150 (97-318)||(5915-6136)
[»] scaffold0267 (1 HSPs)
scaffold0267 (82-235)||(3650-3802)
[»] scaffold0060 (1 HSPs)
scaffold0060 (97-246)||(66258-66407)
[»] scaffold1875 (1 HSPs)
scaffold1875 (25-246)||(827-1048)
[»] scaffold0007 (1 HSPs)
scaffold0007 (132-316)||(250518-250703)
[»] scaffold0002 (3 HSPs)
scaffold0002 (98-246)||(455111-455260)
scaffold0002 (98-165)||(455015-455083)
scaffold0002 (25-72)||(455274-455321)
[»] scaffold0174 (1 HSPs)
scaffold0174 (85-246)||(29789-29949)
[»] scaffold1202 (1 HSPs)
scaffold1202 (82-185)||(1906-2010)
[»] scaffold0291 (2 HSPs)
scaffold0291 (84-246)||(9992-10154)
scaffold0291 (258-318)||(10169-10229)
[»] scaffold0014 (1 HSPs)
scaffold0014 (101-246)||(112214-112360)
[»] scaffold0103 (1 HSPs)
scaffold0103 (82-246)||(2998-3163)
[»] scaffold0024 (1 HSPs)
scaffold0024 (98-226)||(43915-44043)
[»] scaffold0171 (1 HSPs)
scaffold0171 (149-246)||(9168-9266)
[»] scaffold0683 (1 HSPs)
scaffold0683 (180-318)||(5118-5258)
[»] scaffold0064 (1 HSPs)
scaffold0064 (136-220)||(54492-54576)
[»] scaffold0474 (1 HSPs)
scaffold0474 (168-230)||(8067-8129)
[»] scaffold0005 (4 HSPs)
scaffold0005 (136-246)||(35175-35286)
scaffold0005 (136-208)||(54989-55062)
scaffold0005 (136-220)||(205057-205143)
scaffold0005 (97-130)||(54982-55015)
[»] scaffold0084 (1 HSPs)
scaffold0084 (140-217)||(4616-4694)
[»] scaffold0187 (1 HSPs)
scaffold0187 (209-246)||(4943-4980)
[»] scaffold0173 (1 HSPs)
scaffold0173 (155-208)||(22928-22983)
[»] scaffold0010 (1 HSPs)
scaffold0010 (149-217)||(128451-128518)


Alignment Details
Target: chr5 (Bit Score: 180; Significance: 4e-97; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 18 - 317
Target Start/End: Complemental strand, 25557174 - 25556876
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgct 116  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||         ||||||||||||||  ||||||||||||||||||||    
T  25557174 aaactctacttttcgccccctaagtttcaaaatgttgcgattttgaccccctattaaaaaaat-ggcaaaagtgaccccctatgtttagggaaatatgct 25557076  T
Q  117 tttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
     |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25557075 cttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 25556976  T
Q  217 agcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    |||||||||||||||||||||||||||||| |||       |||||||| ||||||| |||  ||||| ||||||||||| ||| |||||||||||||||    
T  25556975 agcaattttgggatgaaaggggccaaaattgccaattttttaatagggggccaaaattgcaacattttgaaacatagggg-cgataagtgcagtttagcc 25556877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 25 - 319
Target Start/End: Original strand, 18695015 - 18695309
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    |||||||| || |||||||| ||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||||| |||||||    
T  18695015 acttttcgccctctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgacccctatgtttagggaaatatgctcttttgac 18695114  T
Q  125 cccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattt 224  Q
    | | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18695115 ctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaattt 18695214  T
Q  225 tgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcctat 319  Q
    || ||||||||||||||||||| |||       |||||||| |||||||||||  ||||| ||||||||||| ||| ||||||| ||||||||||    
T  18695215 tgagatgaaaggggccaaaattgccatttttttaatagggggccaaaatcgcaatattttgaaacatagggggcgaaaagtgcactttagcctat 18695309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 25 - 325
Target Start/End: Original strand, 245607 - 245907
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    |||||||| || |||||||||||||| ||||  ||||| |||||||||         |||||||||||||| |||||||||||||||||||| |||||||    
T  245607 acttttcgccctctaagtttcaaaatattgcaattttggccccctattaaaaaaat-ggcaaaagtgacccctatgtttagggaaatatgctcttttgac 245705  T
Q  125 cccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattt 224  Q
    | | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  245706 ctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaattt 245805  T
Q  225 tgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcctatgttt 323  Q
    | ||||||| |||||||||||| |||        |||||||||| |||||||||  ||||||||||||||| | ||| ||||||| |||||||| |||||    
T  245806 tcggatgaagggggccaaaattgccattttttttaataggggactaaaatcgcaacattttaaaacataggtggcgaaaagtgcactttagcctttgttt 245905  T
Q  324 ta 325  Q
    ||    
T  245906 ta 245907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 41 - 317
Target Start/End: Complemental strand, 16901272 - 16900996
Alignment:
Q  41 gtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataaggga 140  Q
    |||||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||    
T  16901272 gtttcaaaatgttgcgattttgaccccctattaaaaaaat-ggcaaaagtgacccctatgtttagggaaatatgctcttttgacctcctaacataaggga 16901174  T
Q  141 aatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggcc 240  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16901173 aatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaatgggcc 16901074  T
Q  241 aaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    |||||| |||        ||||||||  ||||||||||  ||||| ||||||||| | ||| ||||||||||||||||    
T  16901073 aaaattgccattttttttaatagggggtcaaaatcgcaacattttgaaacataggaggcgaaaagtgcagtttagcct 16900996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 26639330 - 26639108
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccc-atatgtttagggaaatatgcttttttga 123  Q
    ||||||||||| |||||||||||||||||||| |||||  ||||| ||         |||||||||||||| ||||||||||||||||||||| ||||||    
T  26639330 acttttcgtcctctaagtttcaaaatgttgcgattttggtcccctgttaaaaaaaatggcaaaagtgaccccatatgtttagggaaatatgctcttttga 26639231  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  26639230 cctcctaacataagggaaatatgcgttttgaccccttatctttacaaaaagttgcaattatggcctcttttttgggacacgtggcgtcttctcaacaatt 26639131  T
Q  224 ttgggatgaaaggggccaaaatt 246  Q
    |||||||||| ||||||||||||    
T  26639130 ttgggatgaagggggccaaaatt 26639108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 25 - 313
Target Start/End: Complemental strand, 40428930 - 40428642
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    |||||||| || |||||||||||||||||||| |||||||||| ||||         ||||||||| |||| | |||||||||||||||| | |||||||    
T  40428930 acttttcgccctctaagtttcaaaatgttgcgattttgacccc-tattaaaaaatatggcaaaagtcacccctgtgtttagggaaatatgttcttttgac 40428832  T
Q  125 cccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattt 224  Q
    | | ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  40428831 ctcctaacataagggaaatatgctttttgaccccttatctttacaaaaaattgcgattatgaccccttttttgggacacgtggcgtcttctcagcaattt 40428732  T
Q  225 tgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagttta 313  Q
    ||||| ||| |||||||||||| |||        ||||||||||||||||||||  ||||| ||||||||||| ||| ||||||| ||||    
T  40428731 tgggacgaagggggccaaaattgccattttttttaataggggaccaaaatcgcaacattttgaaacatagggggcgaaaagtgcacttta 40428642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 82 - 318
Target Start/End: Complemental strand, 31055550 - 31055313
Alignment:
Q  82 ggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |    
T  31055550 ggcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccttaacataagggaaatatgttttttgaccccttatctttacaaaaaattgcga 31055451  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataa 280  Q
    ||||| |||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||| | |       |||||||| ||||||| |||  |    
T  31055450 ttatgaccccttttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaattgctatttttttaatagggggccaaaattgcaaca 31055351  T
Q  281 ttttaaaacataggggacgagaagtgcagtttagccta 318  Q
    || | ||||||||||| ||| |||||||||||||||||    
T  31055350 ttatgaaacatagggggcgaaaagtgcagtttagccta 31055313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 18 - 318
Target Start/End: Original strand, 38408633 - 38408933
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgct 116  Q
    |||||| |||||||||||||||||||||||||| ||||| ||||| |||||||||         ||||||||||||||  ||||||||| ||||||||||    
T  38408633 aaactccacttttcgtcccctaagtttcaaaatattgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagagaaatatgct 38408732  T
Q  117 tttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
     |||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||| |||| ||||||||||||| ||||||     
T  38408733 cttttgaccact-aacataagggaaatatgttttttgaccccttatctttacaaaaagttgctattatgacccattttctgggacacgtggcatcttctg 38408831  T
Q  217 agcaattttgggatgaaaggggccaaaatttc-cannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagc 315  Q
    |||||||||||||||||| ||||||||||| |  |       ||||||||||||||||||||  ||| |||||||||| |||||| || |||||||||||    
T  38408832 agcaattttgggatgaaa-gggccaaaattgctaatttttttaataggggaccaaaatcgcaacattataaaacatagaggacgaaaaatgcagtttagc 38408930  T
Q  316 cta 318  Q
    |||    
T  38408931 cta 38408933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 83 - 319
Target Start/End: Complemental strand, 16307712 - 16307474
Alignment:
Q  83 gcaaaagtgaccca-tatgtttagggaaatatgcttttttgacccct-taacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaa 180  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||  |||||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  16307712 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacccccctaacataaggaaaatatgttttttgactccttatctttacaaaaagttgcaa 16307613  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataa 280  Q
    ||||| |||||||||| ||||| ||||||||||||||||||||||  ||||||||||||||||||| |||       ||||||||||||||||| ||  |    
T  16307612 ttatgacccctttttttggacatgtggcgtcttctcagcaattttaagatgaaaggggccaaaattgccatttttttaataggggaccaaaatcacaaca 16307513  T
Q  281 ttttaaaacataggggacgagaagtgcagtttagcctat 319  Q
    ||||||||||||||||  || |||||||||||| |||||    
T  16307512 ttttaaaacatagggggtgaaaagtgcagtttaacctat 16307474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 19169411 - 19169648
Alignment:
Q  82 ggcaaaagtga-cccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||| ||| |||||||||| |||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19169411 ggcaaaagtgatcccctatgtttaggaaaatatgctcatttgacctcttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaa 19169510  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcata 279  Q
    ||||||||| |||||| | |||||||||||||||||||||||||| |||| || |||||||||||| |||        |||||| | |||||||| ||      
T  19169511 ttatggcccatttttttgaacacgtggcgtcttctcagcaattttaggatcaagggggccaaaattgccattttttttaataggaggccaaaatcacaac 19169610  T
Q  280 attttaaaacataggggacgagaagtgcagtttagcct 317  Q
    ||||| ||| ||||||||||| ||||||| ||||||||    
T  19169611 attttgaaatataggggacgaaaagtgcactttagcct 19169648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 82 - 246
Target Start/End: Original strand, 36641211 - 36641376
Alignment:
Q  82 ggcaaaagtga-cccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||| ||| ||||||||| |||||||||| |||||||| | ||||||||||||||||||||||||||||| ||||||||| |||||||||| |    
T  36641211 ggcaaaagtgagcccctatgtttagagaaatatgctcttttgacctcctaacataagggaaatatgctttttgacccgttatctttataaaaagttgcga 36641310  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||  |||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||    
T  36641311 ttatgatcccttttttgggacacatggcgtcttctcagcaattttttgatgaaaggggccaaaatt 36641376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 83 - 317
Target Start/End: Original strand, 10379351 - 10379585
Alignment:
Q  83 gcaaaagtgacc-catatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaat 181  Q
    |||||||||||| | |||||||||| ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  10379351 gcaaaagtgacctcctatgtttaggaaaatatgctcttttgacccct-aacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgat 10379449  T
Q  182 tatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataat 281  Q
    |||| |||||||| || |||| ||||| |||||| || |||||||||||||||||| |||||||| | |       ||||  |||||||||| |||  ||    
T  10379450 tatgaccccttttctgagacaagtggcatcttctgagaaattttgggatgaaagggaccaaaattgctatttttttaataaaggaccaaaattgcaacat 10379549  T
Q  282 tttaaaacataggggacgagaagtgcagtttagcct 317  Q
    | ||||||||| ||| ||| ||||||||||||||||    
T  10379550 tataaaacataaggggcgaaaagtgcagtttagcct 10379585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 17704875 - 17704670
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||||||         | ||||||| ||||||  ||||||| ||||||||| |||||||    
T  17704875 acttttcgtcccctaagtttcaaaatattgcgattttggccccctattaaaaaaatag-caaaagtaacccat--gtttaggaaaatatgctcttttgac 17704779  T
Q  125 cccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattt 224  Q
    || | |||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||| | ||||| | |||||||||||||    
T  17704778 ccat-aacataagggaaatatactttttgaccctttatctttacaaaaagttgaaattatggccccttttttgggataagtggcatgttctcagcaattt 17704680  T
Q  225 tgggatgaaa 234  Q
    ||||| ||||    
T  17704679 tgggacgaaa 17704670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 85 - 246
Target Start/End: Complemental strand, 38476703 - 38476541
Alignment:
Q  85 aaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaatt 182  Q
    |||||||||||  ||| |||||||||||||||| |||||||||| |||||||||||||||||| | |||||||||||||||||  ||||||||||| |||    
T  38476703 aaaagtgaccccctatatttagggaaatatgctcttttgaccccataacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgatt 38476604  T
Q  183 atggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||| ||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  38476603 atgaccc-ttttttgggacacgtggcgtcttctcagcaattttgggacgaaatgggccaaaatt 38476541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 23765682 - 23765462
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    |||||||| || |||||||| ||||||||||  ||||| |||||||||         |  ||||||||||| |||||||||||||||||||| |||||||    
T  23765682 acttttcgccctctaagttttaaaatgttgcaattttggccccctattaaaaaaaatgataaaagtgacccctatgtttagggaaatatgctcttttgac 23765583  T
Q  125 cccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattt 224  Q
    | | |||||||||||||||||||||||||| |  |||||||||||||||||||| |||||||   ||||||| ||||||||||||||||||||| |||||    
T  23765582 ctcctaacataagggaaatatgctttttgatcatttatctttacaaaaagttgcgattatgg--tctttttttggacacgtggcgtcttctcagaaattt 23765485  T
Q  225 tggga-tgaaaggggccaaaatt 246  Q
    | ||| | |||||||||||||||    
T  23765484 ttggatttaaaggggccaaaatt 23765462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 23815530 - 23815310
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    |||||||| || |||||||| ||||||||||  ||||| |||||||||         |  ||||||||||| |||||||||||||||||||| |||||||    
T  23815530 acttttcgccctctaagttttaaaatgttgcaattttggccccctattaaaaaaaatgataaaagtgacccctatgtttagggaaatatgctcttttgac 23815431  T
Q  125 cccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattt 224  Q
    | | |||||||||||||||||||||||||| |  |||||||||||||||||||| |||||||   ||||||| ||||||||||||||||||||| |||||    
T  23815430 ctcctaacataagggaaatatgctttttgatcatttatctttacaaaaagttgcgattatgg--tctttttttggacacgtggcgtcttctcagaaattt 23815333  T
Q  225 tggga-tgaaaggggccaaaatt 246  Q
    | ||| | |||||||||||||||    
T  23815332 ttggatttaaaggggccaaaatt 23815310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 98 - 246
Target Start/End: Complemental strand, 17825716 - 17825568
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||||||||||||||| ||||||||||| |||||||| |||||||| | ||||||||| |||||||  ||||||||||| |||||||||||||||||    
T  17825716 atgtttagggaaatatgctcttttgacccct-aacataagagaaatatgttcttttgaccctttatcttgtcaaaaagttgcgattatggcccctttttt 17825618  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||||||||||||||||||| |  ||||||| |||||||||||||||||||    
T  17825617 gggacacgtggcgtcttctaaaaaattttgagatgaaaggggccaaaatt 17825568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 25 - 248
Target Start/End: Complemental strand, 10293378 - 10293156
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    ||||||||||| |||||||||||||||||| | ||||||||| |||||         ||||||| ||||||  ||||||| |||||||||||| ||||||    
T  10293378 acttttcgtccactaagtttcaaaatgttgtgattttgacccgctattaaaaaat--ggcaaaaatgaccccctatgttttgggaaatatgctcttttga 10293281  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||| |||||||| |||||||||| ||||||||||| |||||| || |||||||  |||| ||||||||||||||||| ||    
T  10293280 cctcctaacataagggaaatatgttttttgactccttatctttccaaaaagttgcgattatgacctcttttttaagacatgtggcgtcttctcagcattt 10293181  T
Q  224 ttgggatgaaaggggccaaaatttc 248  Q
    || ||| |||| |||||||| ||||    
T  10293180 ttaggacgaaatgggccaaattttc 10293156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 98 - 242
Target Start/End: Complemental strand, 37961468 - 37961323
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||||||||||| ||| |||||||| | |||||||||||||| ||| | ||||||||||||| |||  |||||||||||||||||||||||||||      
T  37961468 atgtttagggaaatacgctcttttgaccgcctaacataagggaaaaatgatcttttgaccccttaacttctcaaaaagttgcaattatggccccttttaa 37961369  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaa 242  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  37961368 gggacacgtggtgtcttctcagcaattttgggatgaaagggaccaa 37961323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 97 - 318
Target Start/End: Original strand, 7835794 - 7836014
Alignment:
Q  97 tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    |||||||||||||||||||| ||||||||| | ||||||||| ||||||| |||||||||||||||||||||||| || ||  |||||||||| ||||||    
T  7835794 tatgtttagggaaatatgctcttttgacccat-aacataaggaaaatatgttttttgaccccttatctttacaaagaggtgggattatggcccttttttt 7835892  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacatagggg 296  Q
      |||| |||||||||||||| ||| ||||||||||||| ||| | |||| |||       ||||||   |||||||||||  ||||||||||||| | |    
T  7835893 tagacatgtggcgtcttctcaacaactttgggatgaaagaggctagaattgccatttttttaataggaagccaaaatcgcaatattttaaaacataagag 7835992  T
Q  297 acgagaagtgcagtttagccta 318  Q
     ||| |||||||||||||||||    
T  7835993 gcgaaaagtgcagtttagccta 7836014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 84 - 246
Target Start/End: Complemental strand, 41663756 - 41663594
Alignment:
Q  84 caaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgcttttt-gaccccttatctttacaaaaagttgcaatt 182  Q
    ||||||||||||  ||||||||||||||||||| |||||||||| |||||||||||||||||| ||||| ||| | |||| ||  |||||| |||| |||    
T  41663756 caaaagtgacccc-atgtttagggaaatatgctcttttgaccccataacataagggaaatatgattttttgactctttattttctcaaaaaattgcgatt 41663658  T
Q  183 atggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||| |||| ||| |||||||    
T  41663657 atggccccttttttgggacacgtggcatcttcttagcaattttgggacgaaatgggtcaaaatt 41663594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 85 - 246
Target Start/End: Original strand, 34125130 - 34125293
Alignment:
Q  85 aaaagtgacccat-atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctt-tttgaccccttatctttacaaaaagttgcaatt 182  Q
    ||||||||||| | ||||||||||||||||||| |||||| ||| |||||||||| ||||||| |  ||||||| ||||||||  ||||||||||| |||    
T  34125130 aaaagtgacccttcatgtttagggaaatatgctcttttgatcccctaacataaggaaaatatgatcatttgacctcttatcttctcaaaaagttgcgatt 34125229  T
Q  183 atggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||| ||| | |||||| ||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  34125230 atgacccatgttttggaacacgtggcgtattctcagtaattttgggatgaagggggccaaaatt 34125293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 97 - 246
Target Start/End: Original strand, 2373229 - 2373378
Alignment:
Q  97 tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttt-tgaccccttatctttacaaaaagttgcaattatggccccttttt 195  Q
    |||||||| | ||||||||| ||||||||| | ||||||||||||||||| | || ||||||||||| ||  |||||| |||| |||||| |||||||||    
T  2373229 tatgtttaagaaaatatgctcttttgacccat-aacataagggaaatatgatattatgaccccttattttctcaaaaatttgcgattatgaccccttttt 2373327  T
Q  196 tgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
     ||||||||||||||||||| ||||||||||||| || |||||||||||||    
T  2373328 ggggacacgtggcgtcttcttagcaattttgggacgacaggggccaaaatt 2373378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 38 - 246
Target Start/End: Complemental strand, 35302193 - 35301986
Alignment:
Q  38 taagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataag 137  Q
    ||||||||||||||||||| ||||||||| |||||         ||||||||||||||  || |||||||||||||||| |||||||||| ||||||||     
T  35302193 taagtttcaaaatgttgcgattttgaccctctattataaaaat-ggcaaaagtgacccccatatttagggaaatatgctcttttgaccccctaacataat 35302095  T
Q  138 ggaaatatg--ctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaag 235  Q
    | |||||||  |||||||| ||||||||||   |||||| ||| |||||||||||| || ||||||||||||||||| |||| ||| |||||||  || |    
T  35302094 gtaaatatgatctttttga-cccttatcttctaaaaaagctgcgattatggcccctgttctgggacacgtggcgtctgctcaacaa-tttgggacaaagg 35301997  T
Q  236 gggccaaaatt 246  Q
    |||||||||||    
T  35301996 gggccaaaatt 35301986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 226
Target Start/End: Complemental strand, 15885384 - 15885256
Alignment:
Q  97 tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    |||||||| |||||||| || |||||||| |||||||||||||||||||| || ||||||| |||||||||||||||||| | ||||||| |  ||||||    
T  15885384 tatgtttatggaaatattctcttttgacctcttaacataagggaaatatgtttgttgaccc-ttatctttacaaaaagtttcgattatggtcattttttt 15885286  T
Q  197 gggacacgtggcgtcttctcagcaattttg 226  Q
    |||||| |||| || |||||||||||||||    
T  15885285 gggacatgtggtgttttctcagcaattttg 15885256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 84 - 229
Target Start/End: Complemental strand, 23040182 - 23040039
Alignment:
Q  84 caaaagtgacccatatgtttagggaaatatgcttttttgacc--ccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||||  ||||||||||||||||| ||||||||  || |||||||||||||||||| | |||||||||||||||||  ||||||||||| |    
T  23040182 caaaagtgacccat--gtttagggaaatatgctcttttgacctcccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcga 23040085  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttggga 229  Q
    ||||| ||| |||||||| | ||||||   |||||||||||||||||||    
T  23040084 ttatgaccctttttttggaaaacgtgg---cttctcagcaattttggga 23040039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 82 - 243
Target Start/End: Original strand, 462835 - 462996
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||| ||||  |||||||||||||||||| |||||||||  | || ||||| |||||||| | |||||||||||||||||||||||||||||| |    
T  462835 ggcaaaagtaaccctcatgtttagggaaatatgcctttttgacctat-aatataagagaaatatgttcttttgaccccttatctttacaaaaagttgcga 462933  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaa 243  Q
    ||||| ||   |||||  ||||||||||||||| ||| ||||||| |||  ||| ||||||||    
T  462934 ttatgaccttcttttttagacacgtggcgtcttttcaacaatttttggaccaaaagggccaaa 462996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 98 - 226
Target Start/End: Original strand, 7187274 - 7187401
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttg 197  Q
    ||||||||||||||||  | |||||||||  |||||||||||||||||| ||| |||||  |||| ||||||||||||||| ||||| | ||||||||||    
T  7187274 atgtttagggaaatatattcttttgaccctctaacataagggaaatatgttttatgaccaattatttttacaaaaagttgcgattat-gacccttttttg 7187372  T
Q  198 ggacacgtggcgtcttctcagcaattttg 226  Q
    ||||| |||||||||| | | ||||||||    
T  7187373 ggacatgtggcgtcttttaaacaattttg 7187401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 8645808 - 8645935
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccata-tgtttagggaaatatgcttttttga 123  Q
    |||||||| || || ||||||||||||||||| |||||||||||||||         ||||||| ||||||  | |||||||||||||||||| ||||||    
T  8645808 acttttcgccctcttagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaattgacccccaatgtttagggaaatatgctcttttga 8645907  T
Q  124 ccccttaacataagggaaatatgctttt 151  Q
    || | |||||||||||||||||| ||||    
T  8645908 cctcctaacataagggaaatatgatttt 8645935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 31648173 - 31648290
Alignment:
Q  202 acgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacga 300  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| |||        |||||  | |||||||||||  ||||| |||||||||||||||    
T  31648173 acgtggcgtcttctcagcagttttgggatgaaaggggtcaaaattgccattttttttaatagaaggccaaaatcgcaacattttgaaacataggggacga 31648272  T
Q  301 gaagtgcagtttagccta 318  Q
     |||||||||||||||||    
T  31648273 aaagtgcagtttagccta 31648290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 32466132 - 32465979
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgctt 117  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||         ||||||| |||  |  ||||||||| |||||||||     
T  32466132 aaactgtacttttcgtcccctaagtttcaaaatgttgcgattttgatcccctatt-aaaaaagtggcaaaaatgattctcatgtttaggaaaatatgctc 32466034  T
Q  118 ttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaa 173  Q
    |||||||||| ||| |||||  || || | ||||||||||||||||||||| ||||    
T  32466033 ttttgacccc-taatataagataattaagttttttgaccccttatctttaccaaaa 32465979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 20732713 - 20732628
Alignment:
Q  136 agggaaatatgctttttgaccccttatctttac-aaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagca 220  Q
    ||||||||||||| |||   ||||||||||||| |||||||||| ||| |||||||||| ||||||||||||||| ||||||||||    
T  20732713 agggaaatatgctcttttggcccttatctttaccaaaaagttgcgattttggcccctttgttgggacacgtggcggcttctcagca 20732628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 38322335 - 38322408
Alignment:
Q  148 tttttgaccccttatctttacaaaaa-gttgcaattatggccccttttttgggacacgtggcgtcttctcagca 220  Q
    ||||||||| |||||||||||||||| ||||| ||| || ||||||||||||||||||||||| ||||||||||    
T  38322335 tttttgacctcttatctttacaaaaaagttgcgattttgaccccttttttgggacacgtggcggcttctcagca 38322408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 31648060 - 31648174
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccat-atgtttagggaaatatgct 116  Q
    |||||| |||||||||||| ||| ||||||||||||||| ||||  |||||||||         |||||||||||||| | |||||||||||||||||||    
T  31648060 aaactccacttttcgtcccataaatttcaaaatgttgcgattttcgccccctattaaaaaaat-ggcaaaagtgaccccttatgtttagggaaatatgct 31648158  T
Q  117 tttttgaccccttaac 132  Q
    ||||||||||| ||||    
T  31648159 tttttgaccccctaac 31648174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 18739837 - 18739923
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatcttta-caaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagca 220  Q
    ||||||||||||| ||||| ||| ||||||||| ||||||||| | ||| || ||||||||||||||||||||||| ||||||||||    
T  18739837 agggaaatatgctcttttggccctttatctttatcaaaaagttacgattttgaccccttttttgggacacgtggcggcttctcagca 18739923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 8674038 - 8673928
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaa 234  Q
    ||||||||||||| |||||||||||||||||||||||||||||  |||||  ||| ||||||  |||||||| | |||||||| ||||||| | | |||     
T  8674038 agggaaatatgctcttttgaccccttatctttacaaaaagttgtgattataacccatttttt-agacacgtgacatcttctcaacaattttagaacgaat 8673940  T
Q  235 ggggccaaaatt 246  Q
    |||| |||||||    
T  8673939 ggggtcaaaatt 8673928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 16287612 - 16287678
Alignment:
Q  140 aaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgt 205  Q
    ||||||||| |||||  ||||||||||||||||||||||||||| |||||| ||||||| |||||||    
T  16287612 aaatatgctcttttggtcccttatctttacaaaaagttgcaattttggccctttttttgagacacgt 16287678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 38545459 - 38545373
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttacaaaaag-ttgcaattatggccccttttttgggacacgtggcgtcttctcagca 220  Q
    ||||| ||||||| ||||| ||| |||||||||||||||  |||| |||||| ||||||||| ||||||||||||| ||||||||||    
T  38545459 agggatatatgctcttttggcccattatctttacaaaaaaattgcgattatgacccctttttcgggacacgtggcggcttctcagca 38545373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 36954551 - 36954471
Alignment:
Q  138 ggaaatatgctt-tttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctca 217  Q
    |||||||||||  ||| |||| |||||||||||||||||||||||| ||| | || |||||||||||||| | ||||||||    
T  36954551 ggaaatatgctcattttaccctttatctttacaaaaagttgcaattttggtcactgttttgggacacgtgacctcttctca 36954471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 28538569 - 28538515
Alignment:
Q  159 ttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtctt 213  Q
    |||||||||| ||||| ||||||| || ||||| |||||||||||||||||||||    
T  28538569 ttatctttacgaaaagctgcaattttgacccctattttgggacacgtggcgtctt 28538515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 8645946 - 8645983
Alignment:
Q  209 gtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  8645946 gtcttctcaacaattttgggatgaaaggggccaaaatt 8645983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 20653905 - 20654003
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatg--ctttttgaccccttatctttacaaaaagttgcaattatggccccttttt 195  Q
    ||||||||||||||||||| |||||||||| ||||||||| ||||||||  |||||| | | ||||||||  ||||||||||| | || ||||| |||||    
T  20653905 atgtttagggaaatatgctcttttgacccc-taacataagtgaaatatgaacttttt-atctcttatcttctcaaaaagttgcgaatagggccctttttt 20654002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 23040272 - 23040196
Alignment:
Q  84 caaaagtgacccatatgtttagggaaatatgcttttttga-ccccttaacataagggaaatatg-ctttttgacccct 159  Q
    ||||||||||||  || |||||||||||||||| |||||| |||| |||||||||||||||||| | |||||||||||    
T  23040272 caaaagtgacccc-atatttagggaaatatgctcttttgacccccctaacataagggaaatatgaccttttgacccct 23040196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 38408687 - 38408627
Alignment:
Q  258 aataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    |||||||| |||||||||||  ||||| |||| |||||||||| ||||| |||||||||||    
T  38408687 aatagggggccaaaatcgcaatattttgaaacttaggggacgaaaagtggagtttagccta 38408627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 16901008 - 16901055
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||||| | |||| |||||||||||||||| |||||||||||||||    
T  16901008 acttttcgcctcctatgtttcaaaatgttgcgattttgaccccctatt 16901055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 24025188 - 24025227
Alignment:
Q  149 ttttgaccccttatctttacaaaaagttgcaattatggcc 188  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  24025188 ttttgaccctttatctttacaaaaagttgcaattttggcc 24025227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 42757595 - 42757668
Alignment:
Q  149 ttttgaccccttatctttacaaaaagttgcaattatggcccc--ttttttgggacacgtggcgtcttctcagca 220  Q
    ||||||||| |||||||||||||||||| | ||| || ||||  |||||| ||||||||||||  |||||||||    
T  42757595 ttttgaccctttatctttacaaaaagttacgattttgaccccattttttttggacacgtggcggtttctcagca 42757668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 10497427 - 10497382
Alignment:
Q  27 ttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    ||||||| |||||||||||||||||||||| |||| ||||| ||||    
T  10497427 ttttcgttccctaagtttcaaaatgttgcgattttaaccccttatt 10497382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 31648277 - 31648240
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttg 62  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  31648277 acttttcgtcccctatgtttcaaaatgttgcgattttg 31648240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 26639286 - 26639342
Alignment:
Q  261 aggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    |||||||||||||||||  ||||| |||| ||| |||||| ||||| ||||||||||    
T  26639286 aggggaccaaaatcgcaacattttgaaacttagaggacgaaaagtgaagtttagcct 26639342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 37961270 - 37961306
Alignment:
Q  36 cctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  37961270 cctaagtttcaaaatattgcgattttgaccccctatt 37961306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 179; Significance: 2e-96; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 25 - 318
Target Start/End: Complemental strand, 18538121 - 18537827
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||| ||||| |||||||||         ||||||||||||||  |||||||||||||||||||||||||||    
T  18538121 acttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgcttttttga 18538022  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18538021 cctcataacattagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 18537922  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    || |||||||||||||||||||| | |       |||||||||||||||| |||  ||||||||||||||||||||| |||||||||||||||||    
T  18537921 tttggatgaaaggggccaaaattgctatttttttaataggggaccaaaattgcaacattttaaaacataggggacgaaaagtgcagtttagccta 18537827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 25 - 316
Target Start/End: Original strand, 15735075 - 15735367
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||| |||||  ||||||||         ||||||||||||||  ||||||| |||||||||||| ||||||    
T  15735075 acttttcgccctctaagtttcaaaatgttgcgattttggtcccctattaaaagaaatggcaaaagtgaccccctatgttttgggaaatatgctcttttga 15735174  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | ||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  15735175 cctcgtaacataagggaaatatgtattttgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcaacaatt 15735274  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    ||||||||||||||||||||||| |||       || ||||||||||||| |||  ||||||||||||||||| ||| ||||| |||||||||    
T  15735275 ttgggatgaaaggggccaaaattgccatttttttaaaaggggaccaaaattgcaacattttaaaacatagggggcgaaaagtggagtttagcc 15735367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 25 - 318
Target Start/End: Complemental strand, 30714567 - 30714273
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||| ||| ||||||||||  ||||| |||||||||         ||||||||||||||  ||||||| |||||||||||| ||||||    
T  30714567 acttttcgccctctaaattttaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttcgggaaatatgctcttttga 30714468  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | ||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  30714467 cctcctaacataagggaaatatgctttttgacccgttatctttacaaaaagttgtgattatggccccttttttgggacatgtggcgtcttctcagcaatt 30714368  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    ||||||||||||||||||||||| |||       |||||||| |||||||||||  ||||||||||||||||| ||| ||||||| |||||||||    
T  30714367 ttgggatgaaaggggccaaaattgccatttttttaatagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagccta 30714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 11175918 - 11176140
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||| ||||| |||||||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  11175918 acttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttga 11176017  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  11176018 cctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgtgattatggccccttttttgggacacgtggcgtcttctcagcaatt 11176117  T
Q  224 ttgggatgaaaggggccaaaatt 246  Q
    ||||||||||||||  |||||||    
T  11176118 ttgggatgaaagggatcaaaatt 11176140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 38716217 - 38716426
Alignment:
Q  37 ctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccc-atatgtttagggaaatatgcttttttgaccccttaacata 135  Q
    |||||||| ||||||||||| |||||||||||||||         |||||||||||||| ||||||||||||||||||||| |||||||| | |||||||    
T  38716217 ctaagttttaaaatgttgcgattttgaccccctattaaaaaaat-ggcaaaagtgaccccatatgtttagggaaatatgctcttttgacctcctaacata 38716315  T
Q  136 agggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaag 235  Q
    || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38716316 agagaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaag 38716415  T
Q  236 gggccaaaatt 246  Q
    |||||||||||    
T  38716416 gggccaaaatt 38716426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 27 - 316
Target Start/End: Original strand, 9787573 - 9787861
Alignment:
Q  27 ttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgacc 125  Q
    |||||| |||||| |||| ||||||||||  |||||||||||||||         ||||||||||||||| |||||||||||||||||||| ||||||||    
T  9787573 ttttcgccccctatgttttaaaatgttgcaattttgaccccctattaaaaaaat-ggcaaaagtgacccactatgtttagggaaatatgctcttttgacc 9787671  T
Q  126 ccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatttt 225  Q
       |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  9787672 tgctaacataagggaaatatgctttttgaccccttatctttacaaaaagttacgattatggccccttttttgggacacgtggcgtcttctcagcaatttt 9787771  T
Q  226 gggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
     ||||||||||||||||||||  ||       |||||||| ||||||| |||  ||||| ||||||||||| ||| ||||| |||||||||    
T  9787772 tggatgaaaggggccaaaattgtca-ttttttaatagggggccaaaattgcaatattttgaaacatagggggcgaaaagtgtagtttagcc 9787861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 25 - 316
Target Start/End: Complemental strand, 9051320 - 9051028
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgac-ccatatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||| ||||||||||| |||||||||||||||         |||||||||||| || |||||||||||||||||||| ||||||    
T  9051320 acttttcgccctctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgactccctatgtttagggaaatatgctcttttga 9051221  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||    
T  9051220 cctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgg-cccttttttgggacacggggcgtcttctcagcaatt 9051122  T
Q  224 ttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    ||| |||||| |||||||||||| |||        ||||||||| ||||||||||  ||||||||||||||| | ||| || |||| |||||||    
T  9051121 ttgagatgaagggggccaaaattgccattttttttaataggggatcaaaatcgcaacattttaaaacataggaggcgaaaaatgcactttagcc 9051028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 25 - 319
Target Start/End: Original strand, 2986697 - 2986993
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| ||  ||||||||||||||||||| ||||| |||||||||         | ||||||||||||  |||||||||||||||||||| ||||||    
T  2986697 acttttcgccctttaagtttcaaaatgttgcgattttggccccctattaaaaaaaatgacaaaagtgaccccctatgtttagggaaatatgctcttttga 2986796  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||    
T  2986797 cctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccctttttttggacacatggcgtcttctcagcaatt 2986896  T
Q  224 ttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcctat 319  Q
    |||||||||| |||||||||||| |||        |||||||| |||||||||||  ||||| |||||||| |   || ||||||| ||||||||||    
T  2986897 ttgggatgaagggggccaaaattgccattttttttaatagggggccaaaatcgcaacattttgaaacatagagagtgaaaagtgcactttagcctat 2986993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 25 - 318
Target Start/End: Original strand, 15700758 - 15701052
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| ||| ||||||| ||||||||||| |||||  ||||||||         |||| |||||||||  ||||||| |||||||||||| ||||||    
T  15700758 acttttcgccccttaagttttaaaatgttgcgattttggacccctattaaaaaaaatggcacaagtgaccccctatgtttcgggaaatatgctcttttga 15700857  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||| |||||| |||||||    
T  15700858 ccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctgagcaatt 15700957  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    ||||||||||||||||||||||| | |       ||||||||| ||||||||||  ||| | ||||||||||| ||| ||||||| |||||||||    
T  15700958 ttgggatgaaaggggccaaaattgctattttttaaataggggatcaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagccta 15701052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 27 - 318
Target Start/End: Complemental strand, 6764008 - 6763715
Alignment:
Q  27 ttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgacc 125  Q
    |||||| || |||||||||||||||||||| |||||  ||||||||         ||||||||||||||  |||||||||||||||||||| ||||||||    
T  6764008 ttttcgccctctaagtttcaaaatgttgcgattttggtcccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttgacc 6763909  T
Q  126 ccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatttt 225  Q
     | |||||||||| |||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||    
T  6763908 tcctaacataaggaaaatatgctttttgaccccttatctttacaaaaagtagcgattacggccccttttttgggacacgtggcgtcttctcagcaatttt 6763809  T
Q  226 gggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    ||||| ||| || |||||||| |||        ||||||||||||||||| ||  |||||||||||||  || | | || ||||||||||||||    
T  6763808 gggataaaatggaccaaaattgccattttttttaataggggaccaaaatcacaacattttaaaacataaagggcaaaaaatgcagtttagccta 6763715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 27 - 313
Target Start/End: Complemental strand, 25299091 - 25298804
Alignment:
Q  27 ttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgacc 125  Q
    |||||| || |||||||||||||||||||| ||||  |||||||||         ||||||||||||||  |||||||||||||||||||| ||||||||    
T  25299091 ttttcgccctctaagtttcaaaatgttgcgattttagccccctattaaaaaaat-ggcaaaagtgaccccctatgtttagggaaatatgctcttttgacc 25298993  T
Q  126 ccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatttt 225  Q
     |||||||||| ||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||    
T  25298992 tcttaacataaaggaaatatgttttttgatcccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcatcttctcaacaatttt 25298893  T
Q  226 gggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagttta 313  Q
    |||||||| |||||||||||| | |        |||||| | |||||||||||  ||||||||||||||||| ||| ||||||| ||||    
T  25298892 gggatgaagggggccaaaattgcaattttttttaataggaggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcacttta 25298804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 22191057 - 22191278
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    ||||||||||||||| |||| ||||||||||  ||||| ||||||||          ||||||||||||||  |||||||||||||||||||| ||||||    
T  22191057 acttttcgtcccctatgttttaaaatgttgcaattttggccccctatcaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttga 22191156  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    |  | ||||||||||||||||||| |||||||||||||||||||||||||||| | ||||| | |||||||||||||||||||||| |||||||||||||    
T  22191157 cttcctaacataagggaaatatgccttttgaccccttatctttacaaaaagttacgattat-gacccttttttgggacacgtggcgccttctcagcaatt 22191255  T
Q  224 ttgggatgaaaggggccaaaatt 246  Q
    |||||||||||||||||||||||    
T  22191256 ttgggatgaaaggggccaaaatt 22191278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 111 - 316
Target Start/End: Original strand, 17368314 - 17368518
Alignment:
Q  111 tatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgt 210  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17368314 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgt 17368413  T
Q  211 cttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagt 310  Q
    ||||||| || |||| |||||||||||||||||||| | |       |||||||| ||||||| |||  ||||| ||||||||||| ||| |||||  ||    
T  17368414 cttctcaacattttttggatgaaaggggccaaaattgctatttttttaatagggg-ccaaaattgcaacattttgaaacatagggggcgaaaagtgttgt 17368512  T
Q  311 ttagcc 316  Q
    ||||||    
T  17368513 ttagcc 17368518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 4587871 - 4588042
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnn-ggcaaaagtgaccca-tatgtttagggaaatatgcttttttg 122  Q
    |||||||| ||||||||||||||||||||||| ||||| |||||||||          ||||||||||||||  |||||||||||||||||||| |||||    
T  4587871 acttttcgccccctaagtttcaaaatgttgcgattttggccccctattaaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttg 4587970  T
Q  123 accccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccctttt 194  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| ||||||||    
T  4587971 accccctaacataagggaaatatgttttttaaccccttatctttacaaaaagttgcgattatgacccctttt 4588042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 82 - 318
Target Start/End: Complemental strand, 25884413 - 25884176
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||||  |||||||| |||||||| | |||| | ||| |||||||||||||||||| | |||| ||||||||||||  ||||||||||| |    
T  25884413 ggcaaaagtgacccccatgtttagagaaatatgttattttaatcccctaacataagggaaatatgatattttaaccccttatcttctcaaaaagttgcga 25884314  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataa 280  Q
    |||| |||||| |||||||||  || | || |||||||||||||||||| |||| ||||||||||| |||       |||||||| |||||||||||  |    
T  25884313 ttattgcccctgttttgggacgtgtagtgttttctcagcaattttgggacgaaaagggccaaaattaccatttttttaatagggggccaaaatcgcaaca 25884214  T
Q  281 ttttaaaacataggggacgagaagtgcagtttagccta 318  Q
    ||||||||| |||||| ||| | |||||||||||||||    
T  25884213 ttttaaaacttagggggcgaaatgtgcagtttagccta 25884176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 85 - 243
Target Start/End: Complemental strand, 22387300 - 22387141
Alignment:
Q  85 aaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattat 184  Q
    ||||||||||   |||||||| |||||||||| |||||||||| ||||||| | |||||||| ||||||||||||||||| |||||| |||||  |||||    
T  22387300 aaaagtgaccttcatgtttagtgaaatatgctcttttgaccccctaacatatgagaaatatgttttttgaccccttatctatacaaagagttgtgattat 22387201  T
Q  185 gg-ccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaa 243  Q
    || |||||||||||||||| ||||||||||||||||||||||| || |||||||| ||||    
T  22387200 ggcccccttttttgggacaagtggcgtcttctcagcaattttgagacgaaaggggtcaaa 22387141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 84 - 246
Target Start/End: Original strand, 28365581 - 28365743
Alignment:
Q  84 caaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaatt 182  Q
    |||||||||||| ||| ||||||||||||||||  |||||||||| ||||| ||||||||||| | |||| ||||||||||||  ||||||||||| |||    
T  28365581 caaaagtgacccctatatttagggaaatatgctcgtttgacccct-aacatgagggaaatatgatcttttaaccccttatcttctcaaaaagttgcgatt 28365679  T
Q  183 atggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||| ||| ||||||||||| | ||||||||||||||||||||||||| |||||||| |||||||    
T  28365680 atgaccctttttttgggacgcatggcgtcttctcagcaattttgggacgaaagggggcaaaatt 28365743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 82 - 319
Target Start/End: Original strand, 36464342 - 36464578
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||||  ||||||||||||||||| | |||||||||| |||||||||||||||||  | ||||||| |||||||||  ||||||||||| |    
T  36464342 ggcaaaagtgacccc-atgtttagggaaatatgatcttttgaccccctaacataagggaaatataatcttttgactccttatcttctcaaaaagttgcga 36464440  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataa 280  Q
    | ||||||||||||||| |||||||| | |||||||||||||||||||| |||| || ||||||||  ||       |||| |||| ||||||||||  |    
T  36464441 t-atggccccttttttgagacacgtgacatcttctcagcaattttgggacgaaatggaccaaaattgtcatttttttaataagggatcaaaatcgcaaca 36464539  T
Q  281 ttttaaaacataggggacgagaagtgcagtttagcctat 319  Q
    |||| |||| |||| | ||| |||||||||||| |||||    
T  36464540 ttttgaaacttaggaggcgaaaagtgcagtttaacctat 36464578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 101 - 246
Target Start/End: Complemental strand, 4105040 - 4104895
Alignment:
Q  101 tttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttggg 199  Q
    |||||||||||||  | |||||||| || |||||||||| |||||||| ||||||| |||||| ||||||||||||||| |||||| ||||||||| ||     
T  4105040 tttagggaaatatattcttttgacctct-aacataaggggaatatgctcttttgacaccttatatttacaaaaagttgcgattatgacccctttttagga 4104942  T
Q  200 acacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||||||||||||||||||||||||||| |||| ||| |||||||    
T  4104941 acacgtggcgtcttctcagcaattttgggacgaaatgggtcaaaatt 4104895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 98 - 246
Target Start/End: Complemental strand, 26829308 - 26829160
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccc-ttttt 195  Q
    ||||||| ||||||||||| ||| ||||||| ||||||||||||||||| | ||||||||||||||| |  ||||||||||  ||||||||||| |||||    
T  26829308 atgtttaaggaaatatgctctttggacccct-aacataagggaaatatgatcttttgaccccttatcatctcaaaaagttgtgattatggcccccttttt 26829210  T
Q  196 tgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||||| |||| ||||||||||| |||||||| || ||||||||||||||||    
T  26829209 tggga-acgtagcgtcttctcaacaattttgagacgaaaggggccaaaatt 26829160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 84 - 221
Target Start/End: Original strand, 2190605 - 2190741
Alignment:
Q  84 caaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctt-tttgaccccttatctttacaaaaagttgcaatt 182  Q
    ||||||||||||||  ||||||||||||||||| |||||||||  |||| ||||| |||||||||  |||| ||||||||||||||||||||||||  ||    
T  2190605 caaaagtgacccat--gtttagggaaatatgctcttttgaccctctaacttaaggaaaatatgctcgtttggccccttatctttacaaaaagttgcggtt 2190702  T
Q  183 atggccccttttttgggacacgtggcgtcttctcagcaa 221  Q
    ||| ||| | |||||||||| || ||| |||||||||||    
T  2190703 atgacccatattttgggacatgttgcggcttctcagcaa 2190741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 98 - 226
Target Start/End: Original strand, 331797 - 331926
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgc-tttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||||||||||||||| |||||||||  |||| |||||||||||||| ||||||| || |||||||| ||||||||||| |||||| ||||| ||||    
T  331797 atgtttagggaaatatgctcttttgaccctctaacttaagggaaatatgcttttttgatccattatctttgcaaaaagttgcgattatgacccctatttt 331896  T
Q  197 gggacacgtggcgtcttctcagcaattttg 226  Q
     | ||| |||||| |||||| |||| ||||    
T  331897 tgaacatgtggcggcttctcggcaactttg 331926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 98 - 226
Target Start/End: Original strand, 14743402 - 14743531
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    |||||| |||||||||| | |||||||||  |||| |||| |||||||||| ||||| |||||||| ||| |||||| |||| ||||| |||||| ||||    
T  14743402 atgttttgggaaatatgatcttttgaccctataacttaagagaaatatgctcttttggccccttatttttgcaaaaatttgcgattatagcccctatttt 14743501  T
Q  197 gggacacgtggcgtcttctcagcaattttg 226  Q
    ||||||||||| | ||||||||||| ||||    
T  14743502 gggacacgtggtggcttctcagcaactttg 14743531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 15147835 - 15147908
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggc 208  Q
    ||||||||||||| |||||| || ||||||| |||||||||||| ||||| |||||||||||||||||||||||    
T  15147835 agggaaatatgctcttttgatccattatcttaacaaaaagttgcgattatagccccttttttgggacacgtggc 15147908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 2123511 - 2123583
Alignment:
Q  149 ttttgaccccttatctttacaaaaagttgcaattatggc-cccttttttgggacacgtggcgtcttctcagca 220  Q
    ||||||||| |||||||||||||||||||||||| || | |||| |||||||||| |||||||||||||||||    
T  2123511 ttttgaccctttatctttacaaaaagttgcaattttgacaccctgttttgggacatgtggcgtcttctcagca 2123583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 21773493 - 21773331
Alignment:
Q  155 ccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnn 254  Q
    |||||||||||   |||||||||| ||| | |||||| || ||||||||||||| |||||||| ||||||||||| |||| |||||||||||  ||        
T  21773493 ccccttatcttctaaaaaagttgcgattttagcccctgttctgggacacgtggcttcttctcaacaattttgggacgaaa-gggccaaaattgtcatttt 21773395  T
Q  255 nnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
       || ||| || ||||||||||  |||||||||| |||||| |   |||||||||||||||||    
T  21773394 tttaacaggagatcaaaatcgcaacattttaaaacttagggggcagaaagtgcagtttagccta 21773331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 1020478 - 1020554
Alignment:
Q  101 tttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttg 177  Q
    |||| ||||||||||| |||||||||  ||||||||| |||||||| |||||| ||| |||||||| ||||||||||    
T  1020478 tttatggaaatatgctattttgaccctctaacataagagaaatatgatttttgtccctttatcttttcaaaaagttg 1020554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 35844843 - 35844922
Alignment:
Q  140 aaatatgct-ttttgaccccttatctttacaaaaa-gttgcaattatggccccttttttgggacacgtggcgtcttctca 217  Q
    ||||||||| ||||| ||||||||||||||||||| ||||  ||| |||||||||||||||| ||||||||| |||||||    
T  35844843 aaatatgctcttttggccccttatctttacaaaaaagttgtgattttggccccttttttggggcacgtggcggcttctca 35844922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 11919772 - 11919854
Alignment:
Q  140 aaatatgct-ttttgaccccttatctttacaaaaa-gttgcaattatggccccttttttgggacacgtggcgtcttctcagca 220  Q
    ||||||||| ||||| ||||||||||||||||||| ||||| ||| ||  | |||||||||||||||||||| ||||||||||    
T  11919772 aaatatgctcttttgcccccttatctttacaaaaaagttgcgattttgatcacttttttgggacacgtggcggcttctcagca 11919854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 19618956 - 19618881
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttacaaaaa-gttgcaattatggccccttttttgggacacgtggcg 209  Q
    ||||||||||||| |||| |||||||||||||||||||| ||||   ||||| |||||||||||||||| ||||||    
T  19618956 agggaaatatgctcttttaaccccttatctttacaaaaaagttgtgtttatgaccccttttttgggacatgtggcg 19618881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 22191103 - 22191044
Alignment:
Q  259 ataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    ||||||| ||||||| |||  ||||||||||||||||||||| ||||| |||||||||||    
T  22191103 atagggggccaaaattgcaacattttaaaacataggggacgaaaagtgtagtttagccta 22191044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 22699026 - 22698947
Alignment:
Q  140 aaatatgctttt-tgaccccttatctttacaaaaa-gttgcaattatggccccttttttgggacacgtggcgtcttctca 217  Q
    ||||||||| || ||||||||||||||| |||||| ||||  ||| || ||||||||||||||||| ||||| |||||||    
T  22699026 aaatatgctcttctgaccccttatctttgcaaaaatgttgtgattttgaccccttttttgggacacatggcggcttctca 22698947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 36199581 - 36199644
Alignment:
Q  149 ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtct 212  Q
    |||| |||| |||||||||||||||||||||||| || ||||| |||||| |||  ||||||||    
T  36199581 ttttaaccctttatctttacaaaaagttgcaattttgacccctattttggaacatatggcgtct 36199644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 43301725 - 43301787
Alignment:
Q  84 caaaagtgaccc-atatgtttagggaaatatgcttttttgaccccttaacataagggaaatatg 146  Q
    |||||||||||| |||||||||||||| |||| | |||||||||| |||| |||||||||||||    
T  43301725 caaaagtgaccccatatgtttagggaagtatgttcttttgacccc-taacttaagggaaatatg 43301787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 28319188 - 28319106
Alignment:
Q  136 agggaaatatgctttttgaccccttatctttacaaaa-agttgcaattatggccccttttttgggacacgtggcgtcttctca 217  Q
    |||||||||||||||||    |||||||||||||||| |||||| |||||| ||| |||||||  ||||||| || |||||||    
T  28319188 agggaaatatgcttttttggtccttatctttacaaaatagttgcgattatgacccattttttgatacacgtgacggcttctca 28319106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 15147813 - 15147854
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttga 123  Q
    ||||||||||||||  ||||||||||||||||||| ||||||    
T  15147813 ggcaaaagtgacccccatgtttagggaaatatgctcttttga 15147854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 15735122 - 15735061
Alignment:
Q  258 aataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcctat 319  Q
    ||||||||||||||||||||  ||||| |||| ||| || ||| ||||| ||||||||||||    
T  15735122 aataggggaccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcctat 15735061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 11176189 - 11176153
Alignment:
Q  36 cctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||| |||||||||||||||| |||||||||||||||    
T  11176189 cctatgtttcaaaatgttgcgattttgaccccctatt 11176153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 21494555 - 21494615
Alignment:
Q  118 ttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgc 178  Q
    |||||||||  ||||| ||| |||||||| ||||||  | |||||||||||||||||||||    
T  21494555 ttttgaccctctaacagaagagaaatatgttttttgttctcttatctttacaaaaagttgc 21494615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 25884192 - 25884236
Alignment:
Q  28 tttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    ||||| ||||||||||| ||||||||||| ||||| |||||||||    
T  25884192 tttcgccccctaagttttaaaatgttgcgattttggccccctatt 25884236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 169; Significance: 1e-90; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 13578084 - 13577789
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgctt 117  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||         |||||||||||||| |||||||| |||||||||||     
T  13578084 aaactctacttttcgccccctaagtttcaaaatgttgcgattttgaccctctattaaaaaaaatggcaaaagtgacccctatgtttaaggaaatatgctc 13577985  T
Q  118 ttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctca 217  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  13577984 ttttgacccct-aacataagggaaatatgctttttgaccctttatctatacaaaaagttgaaattatggccccttttttggaacacgtggcgtcttctca 13577886  T
Q  218 gcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttag 314  Q
    ||||||||||||||||||||||||||||| |||       |||||||| |||||||||||  ||||| |||||||| |  |||||||||||||||||    
T  13577885 gcaattttgggatgaaaggggccaaaattgccatttttttaatagggggccaaaatcgcaacattttgaaacatagagagcgagaagtgcagtttag 13577789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 18 - 317
Target Start/End: Complemental strand, 11843477 - 11843177
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacc-catatgtttagggaaatatgct 116  Q
    |||||||||||||||  || ||||||||||||||||||| |||||||||||||||         ||||||||||||| | ||||||||||||||||||||    
T  11843477 aaactctacttttcgctccttaagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgacctcctatgtttagggaaatatgct 11843378  T
Q  117 tttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
     ||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | | |||||||||||||||    
T  11843377 cttttgacccct-aacataaggaaaatatgctttttgaccccttatccttacaaaaagttgcaattatggcccctttttttgaatacgtggcgtcttctc 11843279  T
Q  217 agcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagc 315  Q
    |||||||||||||||||||||||||||||| |||        |||||||  |||||||||||  ||||| ||||||||||| ||||||||||||||||||    
T  11843278 agcaattttgggatgaaaggggccaaaattgccattttttttaatagggagccaaaatcgcaacattttgaaacatagggggcgagaagtgcagtttagc 11843179  T
Q  316 ct 317  Q
    ||    
T  11843178 ct 11843177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 18 - 316
Target Start/End: Original strand, 31493915 - 31494214
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgctt 117  Q
    |||||| |||||||| |||||||||||||||||||| || ||||| |||||||||         |||||||||||||| ||||||||||||||||||||     
T  31493915 aaactccacttttcggcccctaagtttcaaaatgttacgattttggccccctattaacaaaaatggcaaaagtgacccctatgtttagggaaatatgctc 31494014  T
Q  118 ttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctca 217  Q
    |||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  31494015 ttttgaccctctaacataaggaaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttggaacacgtggcgtcttctca 31494114  T
Q  218 gcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    |||||||| |||||||||||||||||||| |||        |||||||| |||||||||||  ||||| |||||||| |  ||| || ||||||||||||    
T  31494115 gcaattttaggatgaaaggggccaaaattgccattttttttaatagggggccaaaatcgcaacattttgaaacatagagtgcgaaaaatgcagtttagcc 31494214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 25 - 319
Target Start/End: Complemental strand, 21224645 - 21224351
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||| |||||||||||| ||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  21224645 acttttcgccctctaagtttcaaaatgttgcgattttgaccccctgttaaaaaaaaaggcaaaagtgaccccctatgtttagggaaatatgctcttttga 21224546  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  21224545 cctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccctttttttgagacacgtggcgtcttctcagcaatt 21224446  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcctat 319  Q
    || |||||||||||||||||||| | |       |||||||||||||||| |||  ||||| ||||||| ||| ||| || |||||||||||||||    
T  21224445 tttggatgaaaggggccaaaattgctatttttttaataggggaccaaaattgcaacattttgaaacataaggg-cgaaaaatgcagtttagcctat 21224351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 3562725 - 3562504
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    ||||||||||| ||||||||||||||||| || ||||| |||||||||         |||||||||||||| |||||||||||||||||||| |||||||    
T  3562725 acttttcgtcctctaagtttcaaaatgttacgattttggccccctattaaaaaaaatggcaaaagtgacccctatgtttagggaaatatgctcttttgac 3562626  T
Q  125 cccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattt 224  Q
    | | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||    
T  3562625 ctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttaggacacgtggcgtcttctcagcaagtt 3562526  T
Q  225 tgggatgaaaggggccaaaatt 246  Q
    | ||||||| ||||||||||||    
T  3562525 taggatgaagggggccaaaatt 3562504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 25 - 317
Target Start/End: Complemental strand, 27869488 - 27869195
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||| |||||   |||||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  27869488 acttttcgccctctaagtttcaaaatgttgcgattttggagccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttga 27869389  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  27869388 cctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacatggcgtcttctcagcaatt 27869289  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    |||||||||| | ||||||||||  ||       ||||||||  ||||||||||  ||||| ||||||||||| ||| ||||||| ||||||||    
T  27869288 ttgggatgaaggaggccaaaattgtcatttttttaatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcct 27869195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 18 - 318
Target Start/End: Complemental strand, 48176262 - 48175960
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgac-ccatatgtttagggaaatatgct 116  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||         ||||||||| || || ||||||||||||||||||||    
T  48176262 aaactctacttttcgccccctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtaactccctatgtttagggaaatatgct 48176163  T
Q  117 tttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
     ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||| ||||||     
T  48176162 cttttgacccct-aacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctg 48176064  T
Q  217 agcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacg-agaagtgcagtttag 314  Q
    |||||||||||||||||||||||||||||| | |        |||||||| |||||||||||  ||| | ||||||||||| || | |||||||||||||    
T  48176063 agcaattttgggatgaaaggggccaaaattgctattttttctaatagggggccaaaatcgcaacattatgaaacatagggggcgaaaaagtgcagtttag 48175964  T
Q  315 ccta 318  Q
    ||||    
T  48175963 ccta 48175960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 37 - 317
Target Start/End: Original strand, 20636642 - 20636923
Alignment:
Q  37 ctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacata 135  Q
    |||||||| ||||||||||| ||||| |||||||||         ||||||||||||||  |||||||||||||||||||| |||||||| | |||||||    
T  20636642 ctaagttttaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacata 20636741  T
Q  136 agggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaag 235  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||| |||    
T  20636742 agggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgttttctcagcaattttgggatg-aag 20636840  T
Q  236 gggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    ||||||||||| |||        ||||||||  ||||||||||  ||||| ||||||||||| ||| ||||||| ||||||||    
T  20636841 gggccaaaattgccatttttttaaatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcct 20636923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 25 - 325
Target Start/End: Complemental strand, 19919894 - 19919595
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    |||||||| || |||||||||||||||||||| |||||||||||||||         ||||||||||||||  ||||||||| ||||||||| |||||||    
T  19919894 acttttcgccctctaagtttcaaaatgttgcgattttgaccccctattaaaaaaaaaggcaaaagtgacccccatgtttagg-aaatatgctcttttgac 19919796  T
Q  125 cccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattt 224  Q
    | | |||||||||| ||||||| ||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||| |||| |||||||||||||    
T  19919795 ctcctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgtgattatagccccttttttgggacacgtagcgttttctcagcaattt 19919696  T
Q  225 tgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcctatgtttt 324  Q
    ||||||||| || ||||||||| |||       |||| ||| |||||||||||  ||||||||| ||||||| ||| ||||||| |||| ||||| ||||    
T  19919695 tgggatgaagggtgccaaaattgccatttttttaataaggggccaaaatcgcaacattttaaaatatagggggcgaaaagtgcactttaacctatttttt 19919596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 25 - 318
Target Start/End: Complemental strand, 24597808 - 24597515
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||| ||||||||||| ||||| |||||||||         ||||||||| ||||  |||||||||||||||||||| ||||||    
T  24597808 acttttcgccctctaagttttaaaatgttgcgattttgtccccctattaaaaaaaatggcaaaagtaaccccctatgtttagggaaatatgctcttttga 24597709  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||    
T  24597708 cctcctaacataagggaaatatgttttttgaccccttctctttacaaaaagttgcgattatggccccttgtttgagacacgtggcgtcttctcagcaatt 24597609  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    |||||||| |||||||||||||| |||       |||||||| |||||||| ||  ||||| ||||||||| | ||| ||||||| |||||||||    
T  24597608 ttgggatg-aaggggccaaaattgccatttttttaatagggggccaaaatcacaacattttgaaacataggaggcgaaaagtgcactttagccta 24597515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 37 - 317
Target Start/End: Complemental strand, 19195494 - 19195213
Alignment:
Q  37 ctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacata 135  Q
    |||||||| ||||||||||  |||||||||||||||         ||||||||||||||  |||||||||||||||| ||| |||||||| | |||||||    
T  19195494 ctaagttttaaaatgttgcaattttgaccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatacgctcttttgacctcctaacata 19195395  T
Q  136 agggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaag 235  Q
    ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  19195394 agggaaatatgttttttgaccccttatctttacaaaaagttgtgattatggccccttttttgggacatgtggcgtcttctcaacaatttttggatgaaag 19195295  T
Q  236 gggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    ||||||||||| | |       |||||||||||||||| |||  ||||| |||||||||||  || || |||||||||||||    
T  19195294 gggccaaaattgctatttttttaataggggaccaaaattgcaatattttgaaacatagggggtgaaaaatgcagtttagcct 19195213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 27 - 246
Target Start/End: Complemental strand, 41452540 - 41452320
Alignment:
Q  27 ttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccat-atgtttagggaaatatgcttttttgacc 125  Q
    ||||||||| ||||||||||||||||||   ||||| |||||||||         |||||||||||||| | |||||||||||||||| || || |||||    
T  41452540 ttttcgtcctctaagtttcaaaatgttgtaattttggccccctattaaaaaaaatggcaaaagtgaccccttatgtttagggaaatatactcttctgacc 41452441  T
Q  126 ccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatttt 225  Q
     | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||    
T  41452440 tcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtgtcgtcttctcagcaatttt 41452341  T
Q  226 gggatgaaaggggccaaaatt 246  Q
     ||||||||||||||||||||    
T  41452340 tggatgaaaggggccaaaatt 41452320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 27 - 317
Target Start/End: Original strand, 42271346 - 42271637
Alignment:
Q  27 ttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgacc 125  Q
    |||||| || |||||||||||||||||||| ||||| || ||||||         ||||||||||||||  |||||||||||||||||||| ||||||||    
T  42271346 ttttcgccctctaagtttcaaaatgttgcgattttggcctcctattaaaaaaat-ggcaaaagtgaccccctatgtttagggaaatatgctcttttgacc 42271444  T
Q  126 ccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatttt 225  Q
     | |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||    
T  42271445 tcctaacataagggaaatatgctttttgaccccttatgtttacaaaaagttgcgattatggccctttttttggaacacgtggcgtcttctcagcaatttt 42271544  T
Q  226 gggatgaaaggggccaaaatt-tccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
     ||||||| |||||||||||| ||         |||||||| | ||||| |||  ||||||||||||||||| ||| ||||||| ||||||||    
T  42271545 cggatgaagggggccaaaattgtcattttttttaatagggggcaaaaattgcaacattttaaaacatagggggcgaaaagtgcactttagcct 42271637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 82 - 316
Target Start/End: Complemental strand, 35337758 - 35337523
Alignment:
Q  82 ggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||||  |||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  35337758 ggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcga 35337659  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataa 280  Q
    ||||| |||||||||||||||||||||||||||||||  ||||||  ||||||||||||||||||| | |       |||||||||||||||  |||  |    
T  35337658 ttatgaccccttttttgggacacgtggcgtcttctcaataattttttgatgaaaggggccaaaattgctatttttttaataggggaccaaaactgcaata 35337559  T
Q  281 ttttaaaacataggggacgagaagtgcagtttagcc 316  Q
    ||||||||||||  || ||| ||||||| |||||||    
T  35337558 ttttaaaacataaagggcgaaaagtgcaatttagcc 35337523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 37 - 317
Target Start/End: Original strand, 8526819 - 8527099
Alignment:
Q  37 ctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacata 135  Q
    |||||||||||||| ||||  |||||||||||||||         ||||||| ||||||  |||||||||| |||||||||  ||||||| | |||||||    
T  8526819 ctaagtttcaaaattttgcaattttgaccccctattaataaaaatggcaaaaatgaccccctatgtttaggaaaatatgctcatttgacctcctaacata 8526918  T
Q  136 agggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaag 235  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||      
T  8526919 agggaaatatgctttttgacccct-atttttacaaaaagttgcaattatggccccttttttgagacacgtggcatcttctcagcaattttgggatgaaga 8527017  T
Q  236 gggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    ||||||||||| |||       |||||||| |||||||||||  ||||| ||| ||||||| ||| ||||||| ||||||||    
T  8527018 gggccaaaattgccatttttttaatagggggccaaaatcgcaacattttgaaatatagggggcgaaaagtgcactttagcct 8527099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 17305775 - 17305998
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnn-ggcaaaagtgacccatatgtttagggaaatatgcttttttga 123  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||||          |||||||||||||| |||||||||| ||||||||| ||||||    
T  17305775 acttttcgtcctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaaatggcaaaagtgacccctatgtttaggaaaatatgctcttttga 17305874  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatg-gccccttttttgggacacgtggcgtcttctcagcaat 222  Q
    || | |||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||  |||||||||||||||| |||||||||||||| ||||    
T  17305875 cctcctaacataagggaaatatgctttttgaccccttatttttacaaaaagttgtgattatgacccccttttttgggacatgtggcgtcttctcatcaat 17305974  T
Q  223 tttgggatgaaaggggccaaaatt 246  Q
    ||||||||||||||| ||||||||    
T  17305975 tttgggatgaaagggcccaaaatt 17305998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 36746795 - 36746574
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| |||||| |||| ||||||||||  ||||| |||||||||         ||||||||| ||||| |||||||||||||||||||| ||||||    
T  36746795 acttttcg-cccctatgttttaaaatgttgcaattttggccccctattaaaaaaaaaggcaaaagtaacccactatgtttagggaaatatgctcttttga 36746697  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | ||||||||| ||||||||| |||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||    
T  36746696 cctcctaacataagagaaatatgccttttaaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcaacaatt 36746597  T
Q  224 ttgggatgaaaggggccaaaatt 246  Q
    |||||||||||||||||||||||    
T  36746596 ttgggatgaaaggggccaaaatt 36746574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 2331025 - 2331243
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    ||||||||||| |||||||| ||||||||||  ||||| |||| ||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  2331025 acttttcgtcctctaagttttaaaatgttgcaattttggccccttattaaaaaaat-ggcaaaagtgaccccctatgtttagggaaatatgctcttttga 2331123  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||  |||||||||||| ||||||||||||||||||||    
T  2331124 cctcctaacataagggaaatatgctttttgactccttatctttacaaaaagttgcgattatggcctattttttgggacaagtggcgtcttctcagcaatt 2331223  T
Q  224 ttgggatgaaaggggccaaa 243  Q
    || |||||||||||||||||    
T  2331224 tttggatgaaaggggccaaa 2331243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 18754566 - 18754337
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgct 116  Q
    |||||| |||||||| ||||||||||||||||||||||| |||||  ||||||||         ||||||||||| ||  ||||||||||||||||||||    
T  18754566 aaactccacttttcgccccctaagtttcaaaatgttgcgattttggtcccctattaaaaaaaatggcaaaagtgatcctctatgtttagggaaatatgct 18754467  T
Q  117 tttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
     |||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||| | | |||| ||||||||||||  ||||||     
T  18754466 cttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaatgttgcgattatgacacattttctgggacacgtggtatcttctg 18754367  T
Q  217 agcaattttgggatgaaaggggccaaaatt 246  Q
    | |||||||||||||||||||| |||||||    
T  18754366 atcaattttgggatgaaaggggtcaaaatt 18754337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 25 - 229
Target Start/End: Original strand, 14624619 - 14624818
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    |||||||||||||||||||||||||| ||||| ||||| |||| ||||         ||||||||| ||||| ||||||||| ||||||||| |||||||    
T  14624619 acttttcgtcccctaagtttcaaaatattgcgattttggcccc-tattaaaaaat--ggcaaaagtaaccca-atgtttaggaaaatatgctcttttgac 14624714  T
Q  125 cccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattt 224  Q
    || | |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  14624715 ccat-aacataagggaaatatactttttgaccctttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcatgttctcagcaattt 14624813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 97 - 319
Target Start/End: Complemental strand, 10024004 - 10023783
Alignment:
Q  97 tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    |||||||||||||||||||| |||||||||| | |||||||| ||||||  ||||||||||||||||||||||||||||||| | |||||||||| ||||    
T  10024004 tatgtttagggaaatatgctcttttgacccccttacataaggaaaatattttttttgaccccttatctttacaaaaagttgcgaatatggcccct-tttt 10023906  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacatagggg 296  Q
    ||||||||||| |||||||||||||||||| ||  |||||||||||||||  ||       ||||||||  |||| |||||  ||||||||| |||||||    
T  10023905 gggacacgtggtgtcttctcagcaattttgagacaaaaggggccaaaattgacatttttttaatagggggtcaaactcgcaacattttaaaatatagggg 10023806  T
Q  297 acgagaagtgcagtttagcctat 319  Q
     ||| |||||||||||| |||||    
T  10023805 gcgaaaagtgcagtttaacctat 10023783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 84 - 246
Target Start/End: Original strand, 4193621 - 4193783
Alignment:
Q  84 caaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaatt 182  Q
    |||||||||||| |  ||||||||||||||||| ||||||||| |||||||||| |||||||| | |||||||||||||||||| |||||||||||||||    
T  4193621 caaaagtgacccctgcgtttagggaaatatgctcttttgaccc-ttaacataagagaaatatgatcttttgaccccttatcttttcaaaaagttgcaatt 4193719  T
Q  183 atggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||| | ||||||||||||||||    
T  4193720 atggccccttttttgagacacgtgacgtcttttcagcaattttggaaggaaaggggccaaaatt 4193783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 32 - 245
Target Start/End: Complemental strand, 44078157 - 44077942
Alignment:
Q  32 gtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccat-atgtttagggaaatatgcttttttgacccctta 130  Q
    |||| |||||||| |||| |||||| |||||||||||||||         ||| ||||||||| || ||||||||||||||||||| |||||||| | ||    
T  44078157 gtcctctaagttttaaaacgttgcgattttgaccccctatttaaaaaaatggcgaaagtgacctatcatgtttagggaaatatgctcttttgacctccta 44078058  T
Q  131 acataagggaaatatgctttttgaccccttatctttaca-aaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttggga 229  Q
    ||||||| |||||||| |||||||||||||||||||||| ||||||||| |||||| |  | |||||||||||| ||||||||||| |||||||||||||    
T  44078057 acataagagaaatatgttttttgaccccttatctttacaaaaaagttgcgattatgacatcctttttgggacacatggcgtcttcttagcaattttggga 44077958  T
Q  230 tgaaaggggccaaaat 245  Q
     ||||||| |||||||    
T  44077957 cgaaagggaccaaaat 44077942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 98 - 317
Target Start/End: Original strand, 39182020 - 39182238
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||||||||||||||| ||||||||   |||||||||||||||||| | |||||||||||||||||  ||||||||||| ||||||||| || ||||    
T  39182020 atgtttagggaaatatgctcttttgacca--taacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatggcctctgtttt 39182117  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacatagggg 296  Q
    ||||||||||| || ||||||||||||||||||  |||||||||||||||  ||       ||||||||  |||||| |||  ||||| |||| ||||||    
T  39182118 gggacacgtggtgttttctcagcaattttgggacaaaaggggccaaaattgtcatttttttaatagggggtcaaaattgcaacatttttaaacttagggg 39182217  T
Q  297 acgagaagtgcagtttagcct 317  Q
     ||| ||||||||||||||||    
T  39182218 gcgaaaagtgcagtttagcct 39182238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 26385274 - 26385494
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccat-atgtttagggaaatatgcttttttga 123  Q
    |||||||||||||||| ||||||||| ||||| |||||  ||||||||         |||||||||||||||| ||||||||||||||||||| ||||||    
T  26385274 acttttcgtcccctaaatttcaaaatattgcgtttttggtcccctattaaaaaat--ggcaaaagtgacccatcatgtttagggaaatatgctattttga 26385371  T
Q  124 ccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaat 222  Q
    ||||| |||||||| |||||||| | |||||||| ||||||||  ||||||||||| |||||||||| | |||||||||| |||||||||| | ||||||    
T  26385372 cccct-aacataagagaaatatgatattttgacctcttatcttctcaaaaagttgcgattatggcccatgttttgggacatgtggcgtcttattagcaat 26385470  T
Q  223 tttgggatgaaaggggccaaaatt 246  Q
    ||| |||  |||||||||||||||    
T  26385471 tttaggacaaaaggggccaaaatt 26385494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 10655334 - 10655562
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtga-cccatatgtttagggaaatatgct 116  Q
    |||||| |||||| | ||||||||||| ||||||||||  ||||| |||| ||||          |||||| ||| ||| ||||||||||||||||||||    
T  10655334 aaactccactttttgccccctaagttttaaaatgttgcagttttggccccttattaaaaaaaattgcaaaaatgatcccctatgtttagggaaatatgct 10655433  T
Q  117 tttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
     |||| | ||| ||| ||||| |||||||  ||||| ||||||||||||||||||||||||| |||||| ||| |||| ||||||||||||| ||||||     
T  10655434 cttttaatcccctaatataagagaaatatt-tttttaaccccttatctttacaaaaagttgcgattatgacccattttctgggacacgtggcatcttctg 10655532  T
Q  217 agcaattttgggatgaaaggggccaaaatt 246  Q
    ||||||||||||||||||||||||||||||    
T  10655533 agcaattttgggatgaaaggggccaaaatt 10655562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 105 - 319
Target Start/End: Complemental strand, 24448256 - 24448042
Alignment:
Q  105 gggaaatatgcttttttgaccccttaacataagggaaatatgctttt-tgaccccttatctttacaaaaagttgcaattatggccccttttt-tgggaca 202  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||  ||  ||||||||||||||||  ||||||    
T  24448256 gggaaatatgcttttttgaccccctaacataagggaaatatgtttttatgaccccttatctttacaaaaaaatgtgattatggcccctttttaagggaca 24448157  T
Q  203 cgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgaga 302  Q
    || | |||||||||||||||||||| | ||||||| ||||||  ||         ||||||||| ||||||||||  |||||||||| | |||| ||| |    
T  24448156 cgcgacgtcttctcagcaattttggaacgaaagggaccaaaa--tcgcattttttaataggggatcaaaatcgcaacattttaaaacttggggggcgaaa 24448059  T
Q  303 agtgcagtttagcctat 319  Q
    |||||||||||||||||    
T  24448058 agtgcagtttagcctat 24448042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 104 - 246
Target Start/End: Original strand, 15681720 - 15681863
Alignment:
Q  104 agggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggaca 202  Q
    |||||| |||| | |||||||||| ||||||||||||| |||| | |||||||||||||||||  ||||||||||| ||||||||| |||||||||||||    
T  15681720 agggaactatgatcttttgaccccctaacataagggaactatgatcttttgaccccttatcttgtcaaaaagttgcgattatggcctcttttttgggaca 15681819  T
Q  203 cgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||||||||||||  |||||||||| ||||||||||||||||    
T  15681820 cgtggcgtcttctcataaattttgggacgaaaggggccaaaatt 15681863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 37 - 185
Target Start/End: Original strand, 20638514 - 20638663
Alignment:
Q  37 ctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacata 135  Q
    |||||||| ||||||||||| ||||| |||||||||         ||||||||||||||  |||||||||||||||||||| |||||||| | |||||||    
T  20638514 ctaagttttaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacata 20638613  T
Q  136 agggaaatatgctttttgaccccttatctttacaaaaagttgcaattatg 185  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20638614 agggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 20638663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 26126339 - 26126487
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||  ||||||||||| |||||||||||| ||||    
T  26126339 atgtttagggaaatatgcttttttgacccct-aacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatggcccctgtttt 26126437  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||||| | | ||||||| |||||||||| |  ||||||||| |||||    
T  26126438 gggacacgagacatcttctctgcaattttggaacaaaaggggccgaaatt 26126487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 97 - 245
Target Start/End: Complemental strand, 21225767 - 21225621
Alignment:
Q  97 tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||  ||||||||||||||||| ||||| | || ||||||    
T  21225767 tatgtttagggaaatatgctcttttgacccct-aacataagggaaatatgctatttgacccctcgtctttacaaaaagttgcgattat-gaccatttttt 21225670  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaat 245  Q
    || ||||||| |||||||||| ||||||| ||| ||||||| |||||||    
T  21225669 ggaacacgtgacgtcttctcaacaattttaggacgaaagggaccaaaat 21225621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 84 - 246
Target Start/End: Complemental strand, 3403286 - 3403122
Alignment:
Q  84 caaaagtgacccat-atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaat 181  Q
    |||||||||||| | |||| |||| ||||||||| |||||||||| |||||||||||||||||| | |||||| ||||||| ||  |||||| |||| ||    
T  3403286 caaaagtgacccctcatgtataggaaaatatgctcttttgaccccctaacataagggaaatatgatcttttgatcccttatgttctcaaaaacttgcgat 3403187  T
Q  182 tatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||| || ||||||||||||| ||||||||| ||||| |||||||||| ||||||||||||||||    
T  3403186 tatgaccacttttttgggacatgtggcgtctcctcaggaattttgggacgaaaggggccaaaatt 3403122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 84 - 246
Target Start/End: Original strand, 19493391 - 19493551
Alignment:
Q  84 caaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgcttttt-gaccccttatctttacaaaaagttgcaatt 182  Q
    ||||||||||||  ||||||| ||||||||||| ||||||||||  ||||||||| ||||||| ||||| ||||| |||||||  |||||||| |  |||    
T  19493391 caaaagtgacccc-atgtttatggaaatatgctattttgacccca-aacataaggaaaatatgattttttgaccctttatcttctcaaaaagt-gtgatt 19493487  T
Q  183 atggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19493488 atggcccctgttttaggacacgtggcgtcttctcagccattttgggatgaaaggggccaaaatt 19493551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 25 - 317
Target Start/End: Original strand, 25002722 - 25003010
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    ||||||||| |||||||||||||||||||| | ||||| |||| ||||         ||||||| ||||||  ||||||||||||| ||||| |||||||    
T  25002722 acttttcgtgccctaagtttcaaaatgttgtgattttggcccc-tattaaataaat-ggcaaaaatgacccc-atgtttagggaaacatgctcttttgac 25002818  T
Q  125 cccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    |||| ||||||| ||||||||| | |||||||||||||||||  || ||| |||| |||||| ||| | ||||||||||| ||||||| ||| ||||| |    
T  25002819 ccct-aacataaaggaaatatgatcttttgaccccttatcttctcataaatttgcgattatgacccgtgttttgggacacatggcgtcctcttagcaact 25002917  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    ||||||| |||||||||||||||  ||       |||| |||||||||||||||  |||||||||| |||||| ||| |||| |||||||||||    
T  25002918 ttgggataaaaggggccaaaattgtca-ttttttaataagggaccaaaatcgcaacattttaaaacttagggggcgaaaagtacagtttagcct 25003010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 136 - 246
Target Start/End: Original strand, 5087118 - 5087229
Alignment:
Q  136 agggaaatatgctttt-tgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaa 234  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||| ||||||  |||| ||||||||||||||||||||||||| ||||||||||| ||||    
T  5087118 agggaaatatgattttttgaccccttatcttttcaaaaagttgcgattatgatccctattttgggacacgtggcgtcttctcatcaattttgggacgaaa 5087217  T
Q  235 ggggccaaaatt 246  Q
    ||||||||||||    
T  5087218 ggggccaaaatt 5087229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 246
Target Start/End: Complemental strand, 33237689 - 33237485
Alignment:
Q  41 gtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataaggga 140  Q
    |||| ||||||||||| ||||||| |||||||         ||||||||| ||||  |||||||||| |||||||| |||| ||||| ||| |||||||     
T  33237689 gttttaaaatgttgcgattttgactccctattaaaaaatatggcaaaagtcacccc-atgtttagggcaatatgctcttttcaccccctaaaataagggt 33237591  T
Q  141 aatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggc 239  Q
    |||||| | ||||||||||||| |||   |||||||||  |||||| || || |||||||||||||||||||||||||||||||||||||||||| ||||    
T  33237590 aatatgatattttgaccccttaccttctaaaaaagttgtgattatgaccactgttttgggacacgtggcgtcttctcagcaattttgggatgaaa-gggc 33237492  T
Q  240 caaaatt 246  Q
    |||||||    
T  33237491 caaaatt 33237485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 121 - 246
Target Start/End: Complemental strand, 9822296 - 9822171
Alignment:
Q  121 tgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagc 219  Q
    ||||||| |||||||||||||||| | | |||||||||||||||||  ||||||||||| |||||| ||||||||| ||||||| |||||||||||||||    
T  9822296 tgaccccctaacataagggaaatacgatcttttgaccccttatcttctcaaaaagttgcgattatgaccccttttt-gggacacatggcgtcttctcagc 9822198  T
Q  220 aattttgggatgaaaggggccaaaatt 246  Q
    |||||||||| ||||||||| ||||||    
T  9822197 aattttgggacgaaaggggctaaaatt 9822171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 121 - 246
Target Start/End: Complemental strand, 10724221 - 10724096
Alignment:
Q  121 tgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagc 219  Q
    ||||||| |||||||||||||||| | | |||||||||||||||||  ||||||||||| |||||| ||||||||| ||||||| |||||||||||||||    
T  10724221 tgaccccctaacataagggaaatacgatcttttgaccccttatcttctcaaaaagttgcgattatgaccccttttt-gggacacatggcgtcttctcagc 10724123  T
Q  220 aattttgggatgaaaggggccaaaatt 246  Q
    |||||||||| ||||||||| ||||||    
T  10724122 aattttgggacgaaaggggctaaaatt 10724096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 24464660 - 24464809
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||||||||||||| | |||||||||| |||||||||||||||||| | |||||||||||||||||  ||||| ||||| ||||||| |  | ||||    
T  24464660 atgtttagggaaatatgttcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaatgttgcgattatggtcattgtttt 24464759  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    | |||| |||||||||||||||||||||| | ||||| |||| |||||||    
T  24464760 gtgacatgtggcgtcttctcagcaattttagaatgaagggggacaaaatt 24464809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 136 - 246
Target Start/End: Original strand, 6650632 - 6650743
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaa 234  Q
    ||||||||||||| |||||||||||||||||  ||||||||||| |||||||||||| ||||| |||| |||||||||||||| ||||||||||| ||||    
T  6650632 agggaaatatgctcttttgaccccttatcttctcaaaaagttgcgattatggcccctgttttgagacatgtggcgtcttctcatcaattttgggacgaaa 6650731  T
Q  235 ggggccaaaatt 246  Q
    ||||| ||||||    
T  6650732 ggggctaaaatt 6650743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 82 - 199
Target Start/End: Complemental strand, 4571578 - 4571461
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||||| ||||||||||||||||||| |||| ||||| |||||||||||||||||| | |||||||||||||||||  ||||||||||| |    
T  4571578 ggcaaaagtgaccca-atgtttagggaaatatgctctttttaccccataacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcga 4571480  T
Q  181 ttatggccccttttttggg 199  Q
    || |||||||| |||||||    
T  4571479 ttgtggcccctgttttggg 4571461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 98 - 225
Target Start/End: Original strand, 3769489 - 3769616
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttac-aaaaagttgcaattatggcccctttttt 196  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||||||||| | ||||||||||| |||||||||| ||||||  ||| ||||     
T  3769489 atgtttagagaaatatgcttttttgaccccttaacatatgagaaatatgctttttgatctcttatctttacaaaaaagttgcgattatgatccc-ttttc 3769587  T
Q  197 gggacacgtggcgtcttctcagcaatttt 225  Q
    |||||| ||||| |||||||| |||||||    
T  3769588 gggacatgtggcatcttctcaacaatttt 3769616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 7365233 - 7365456
Alignment:
Q  26 cttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgacc 125  Q
    ||||||| |||||| |||| |||||||| || ||||  |||||||||         ||||||||||||||| |||||| || ||||||||| | ||||||    
T  7365233 cttttcgccccctatgttttaaaatgttacgatttttgccccctattaaaaaaaatggcaaaagtgaccca-atgttttggcaaatatgctctattgacc 7365331  T
Q  126 ccttaa---cataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaa 221  Q
    |||      ||||||||||||||| | ||||||| |||||||||  ||||||||||| ||||| ||| || |||||||||||||| | ||||||||||||    
T  7365332 cctaccatgcataagggaaatatgatattttgactccttatcttctcaaaaagttgcgattattgcctctgttttgggacacgtgacatcttctcagcaa 7365431  T
Q  222 ttttgggatgaaaggggccaaaatt 246  Q
    |||||||| |||| |||||||||||    
T  7365432 ttttgggacgaaaagggccaaaatt 7365456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 98 - 227
Target Start/End: Original strand, 3148008 - 3148137
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctt-tttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||||||| ||||||| |||||| ||| ||| |||| |||||||||||  |||||||| ||| ||||||||||| |||||||||| |||| ||||||    
T  3148008 atgtttagggatatatgctcttttgatcccctaaaataatggaaatatgctcctttgaccctttaactttacaaaaaattgcaattatagccc-tttttt 3148106  T
Q  197 gggacacgtggcgtcttctcagcaattttgg 227  Q
    |||||||| |||||||||||| |||||||||    
T  3148107 gggacacgaggcgtcttctcaacaattttgg 3148137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 133 - 318
Target Start/End: Original strand, 42303266 - 42303452
Alignment:
Q  133 ataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatg 231  Q
    |||||||||||||| | |||||||||||||||||  |||||| |||| || ||| |||||||| |||||||||||| |||||||||||||||||| ||      
T  42303266 ataagggaaatatgatcttttgaccccttatcttctcaaaaacttgcgatcatgacccctttt-tgggacacgtggtgtcttctcagcaattttgagaca 42303364  T
Q  232 aaaggggccaaaatt-tccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    ||||||||||||||| ||         ||||| ||||||||||||||   |||| |||| |||||| |||||||||||||||||||||    
T  42303365 aaaggggccaaaattgtcatttttttaaatagaggaccaaaatcgcaactttttgaaacttaggggtcgagaagtgcagtttagccta 42303452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 82 - 226
Target Start/End: Original strand, 23439661 - 23439807
Alignment:
Q  82 ggcaaaagtgac-ccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgca 179  Q
    |||||||||||| ||  ||||||| ||||||||| | ||||||| |  |||| ||||||||||||||| |||||| |||||||||||  ||||||||||     
T  23439661 ggcaaaagtgactccccatgtttaaggaaatatgatattttgactctctaacttaagggaaatatgctcttttgatcccttatcttttaaaaaagttgcg 23439760  T
Q  180 attatggccccttttttgggacacgtggcgtcttctcagcaattttg 226  Q
    |||||| ||||| ||||||||||||||||| ||||||| ||| ||||    
T  23439761 attatgacccctgttttgggacacgtggcggcttctcaacaactttg 23439807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 85 - 197
Target Start/End: Original strand, 5111512 - 5111623
Alignment:
Q  85 aaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaatta 183  Q
    |||||||||||  ||||||||| ||||||| | ||||||||||| ||||||||||||||||| | |||||||||||||||||  ||||||||||| ||||    
T  5111512 aaaagtgacccc-atgtttaggaaaatatgttcttttgacccct-aacataagggaaatatgatattttgaccccttatcttctcaaaaagttgcgatta 5111609  T
Q  184 tggccccttttttg 197  Q
    ||||||||||||||    
T  5111610 tggccccttttttg 5111623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 118 - 225
Target Start/End: Complemental strand, 39440320 - 39440212
Alignment:
Q  118 ttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
    |||||||| | |||||||||||||||||| | |||||| ||||||||||| ||||||||||| |||||| ||||| |||| ||||| |||||||||||||    
T  39440320 ttttgacctcctaacataagggaaatatgatcttttgatcccttatcttttcaaaaagttgcgattatgacccctgttttaggacatgtggcgtcttctc 39440221  T
Q  217 agcaatttt 225  Q
    | |||||||    
T  39440220 aacaatttt 39440212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 246
Target Start/End: Original strand, 5348153 - 5348261
Alignment:
Q  140 aaatatgct-ttttgaccccttatctt-tacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggg 237  Q
    ||||||||| ||||||||||||||||| || |||||||||| |||||||| ||| |||||||| | ||| |||||||||||||||||||||| ||||| |    
T  5348153 aaatatgctcttttgaccccttatcttctaaaaaaagttgcgattatggctcctgttttgggatatgtgacgtcttctcagcaattttgggacgaaagag 5348252  T
Q  238 gccaaaatt 246  Q
    | |||||||    
T  5348253 gtcaaaatt 5348261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 38722986 - 38722900
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttac-aaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagca 220  Q
    ||||||||||||| |||||  ||||||||||||| |||||||||| ||| |||||||||||||||||||||||||| ||||||||||    
T  38722986 agggaaatatgctcttttggacccttatctttaccaaaaagttgcgattttggccccttttttgggacacgtggcggcttctcagca 38722900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 246
Target Start/End: Complemental strand, 21264276 - 21264127
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgcttttt-gaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||||||||||||||| |||||| ||  ||||| ||| ||||||| |||||| ||||  ||||||||| |||||  ||  ||| ||| |||| ||||    
T  21264276 atgtttagggaaatatgctattttgatcctctaacagaagagaaatatacttttttgaccttttatctttataaaaaactgtgattgtggaccctatttt 21264177  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    | |||| ||| |||||||||||||||| | ||||||||| ||||||||||    
T  21264176 gagacatgtgacgtcttctcagcaattcttggatgaaagaggccaaaatt 21264127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 226
Target Start/End: Complemental strand, 23461241 - 23461112
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||| ||||||||| | |||||||||  |||| |||| ||||||| || |||||| || ||||| || ||||||||||| |||||| ||||| ||||    
T  23461241 atgtttaaggaaatatgttattttgaccctctaacttaagagaaatattctcttttgatcctttatcatttcaaaaagttgcgattatgacccctgtttt 23461142  T
Q  197 gggacacgtggcgtcttctcagcaattttg 226  Q
    ||||||||||||| ||||||| ||| ||||    
T  23461141 gggacacgtggcggcttctcaacaactttg 23461112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 82 - 191
Target Start/End: Complemental strand, 9157284 - 9157176
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||| | ||||||||| ||||||||| ||||||||||| |||||||| |||||||| | |||||||| ||||||||  ||||||||||| |    
T  9157284 ggcaaaagtgaccaa-atgtttaggaaaatatgctcttttgacccct-aacataagtgaaatatgatcttttgaccacttatcttctcaaaaagttgcga 9157187  T
Q  181 ttatggcccct 191  Q
    |||| ||||||    
T  9157186 ttatagcccct 9157176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 43251349 - 43251499
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||||| |||| | || |||||||||  |||||||||||||||||| | ||||||| | |||||||  ||||||||| | |||| | ||| ||||||    
T  43251349 atgtttaggaaaatgtactcttttgaccctctaacataagggaaatatgatcttttgactctttatcttctcaaaaagttacgattaagacccttttttt 43251448  T
Q  197 gggacacgt-ggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
     |||||||| |||||||||||| || |||| |||||||||  |||||||||    
T  43251449 tggacacgtgggcgtcttctcaacatttttaggatgaaagaagccaaaatt 43251499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 47113202 - 47113315
Alignment:
Q  101 tttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttggg 199  Q
    |||||||||||||||| ||||| |||  || | | ||||||||| | | ||||| ||| ||||||||| |||||||||| ||| |||||||| |||||||    
T  47113202 tttagggaaatatgctcttttggccctctatctttagggaaataagatcttttggccctttatctttataaaaagttgcgattttggcccctgttttggg 47113301  T
Q  200 acacgtggcgtctt 213  Q
    ||||||||||||||    
T  47113302 acacgtggcgtctt 47113315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 6798133 - 6798074
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccc 157  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||| ||||||||||    
T  6798133 atgtttagggaaatatgctcttttgaccctctaacataagggaaatatgatttttgaccc 6798074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 14197006 - 14196923
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttacaaaaa--gttgcaattatggccccttttttgggacacgtggcgtcttctca 217  Q
    ||||||||||||| ||||||||| |||||||||||||||  |||||||||||||||||| |||||| ||| |||||| |||||||    
T  14197006 agggaaatatgctcttttgaccctttatctttacaaaaaaagttgcaattatggcccct-ttttggaacatgtggcggcttctca 14196923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 98 - 226
Target Start/End: Original strand, 23473074 - 23473203
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||| |||||| || | |||||||||  |||| ||||||||||||||| |||||    ||||||||| ||||||||||  |||||| || || ||||    
T  23473074 atgtttaaggaaatgtgttattttgaccctctaacttaagggaaatatgctcttttggtatcttatcttttcaaaaagttgtgattatgacctctgtttt 23473173  T
Q  197 gggacacgtggcgtcttctcagcaattttg 226  Q
    ||||||||||||| ||||||| ||| ||||    
T  23473174 gggacacgtggcggcttctcaacaactttg 23473203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 9154478 - 9154398
Alignment:
Q  139 gaaatatgct-ttttgaccccttatctttacaaaaa-gttgcaattatggccccttttttgggacacgtggcgtcttctca 217  Q
    |||||||||| |||||  ||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||| |||||||    
T  9154478 gaaatatgctcttttggtcccttatctttgcaaaaaagttgcgattatggccccttttatgggacacgtggcggcttctca 9154398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 46267414 - 46267343
Alignment:
Q  150 tttgaccccttatctttacaaaaa-gttgcaattatggccccttttttgggacacgtggcgtcttctcagca 220  Q
    |||||||  ||||||||||||||| ||||| ||||||||||||||||||||||| |||||| ||||| ||||    
T  46267414 tttgacctattatctttacaaaaaagttgcgattatggccccttttttgggacatgtggcggcttctaagca 46267343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 1921042 - 1921088
Alignment:
Q  180 attatggccccttttttgggacacgtggcgtcttctcagcaattttg 226  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  1921042 attatggccccttttttgggacacgtggcggcttctcagcaactttg 1921088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 15093900 - 15093822
Alignment:
Q  168 caaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||||||||||| ||||| |||| | ||||| | |||||| |||||||||||||||||||| | ||||||| ||||||||    
T  15093900 caaaaagttgcgattatagcccatgttttgaggcacgtgacgtcttctcagcaattttggaacgaaagggaccaaaatt 15093822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 15681682 - 15681743
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgacccc 158  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| |||| | ||||||||||    
T  15681682 atgtttagggaaatatgctcttttgaccccctaacataagggaactatgatcttttgacccc 15681743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 43517046 - 43516977
Alignment:
Q  152 tgaccccttatctttacaaaaagttgcaattatggc-cccttttttgggacacgtggcgtcttctcagca 220  Q
    |||||| |||||||||||||||||| ||||| || | |||| ||||| ||||||||||||||||||||||    
T  43517046 tgaccctttatctttacaaaaagtttcaattttgacaccctgttttgagacacgtggcgtcttctcagca 43516977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 220
Target Start/End: Original strand, 24730855 - 24730939
Alignment:
Q  138 ggaaatatgct-ttttgaccccttatctttacaaaaa-gttgcaattatggccccttttttgggacacgtggcgtcttctcagca 220  Q
    ||||||||||| ||||| |||| |||||||||||||| ||||| |  |||| ||||||||||| |||||||||| ||||||||||    
T  24730855 ggaaatatgctcttttggccccgtatctttacaaaaaagttgcgaccatggtcccttttttggaacacgtggcggcttctcagca 24730939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 20636911 - 20636864
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||||| |||||| |||||||||||||||| |||||||||||||||    
T  20636911 acttttcgccccctatgtttcaaaatgttgcgattttgaccccctatt 20636864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 27869207 - 27869254
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||||| |||||| |||||||||||||||| |||||||||||||||    
T  27869207 acttttcgccccctatgtttcaaaatgttgcgattttgaccccctatt 27869254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 39296673 - 39296735
Alignment:
Q  159 ttatctttacaaaaagttgcaattatggcccctt-ttttgggacacgtggcgtcttctcagca 220  Q
    ||||| |||||||||||||||||| || |||| | ||||||| ||||||||||||||||||||    
T  39296673 ttatcattacaaaaagttgcaattttgaccccctattttggggcacgtggcgtcttctcagca 39296735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 45782184 - 45782122
Alignment:
Q  156 cccttatctttacaaaaag-ttgcaattatggccccttttttgggacacgtggcgtcttctca 217  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||||| || | |||||||    
T  45782184 cccttatctttacaaaaaaattgcgattatggccccttttttgggacacgcggtggcttctca 45782122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 23373559 - 23373490
Alignment:
Q  149 ttttgaccccttatctttacaaaaagttgcaattatggcccctt-ttttgggacacgtggcgtcttctca 217  Q
    ||||||||| |||| |||||||| ||||||||||  ||||| || ||||||| |||||||||||||||||    
T  23373559 ttttgaccctttatatttacaaatagttgcaatttcggcccattgttttgggtcacgtggcgtcttctca 23373490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 26385321 - 26385261
Alignment:
Q  258 aataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    ||||||||||||||| ||||  ||||| |||  |||||||||| |||||||||||||||||    
T  26385321 aataggggaccaaaaacgcaatattttgaaatttaggggacgaaaagtgcagtttagccta 26385261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 317
Target Start/End: Original strand, 2331272 - 2331323
Alignment:
Q  266 accaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    |||||||| |||  ||||||||||||||||| ||| ||||||||||||||||    
T  2331272 accaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcct 2331323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 317
Target Start/End: Complemental strand, 6650602 - 6650543
Alignment:
Q  258 aataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    |||| ||| ||||||||||| ||||||||||| |||||| |||  |||||||||||||||    
T  6650602 aataaggggccaaaatcgcaaaattttaaaacttagggggcgaacagtgcagtttagcct 6650543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 6798095 - 6798013
Alignment:
Q  104 agggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatgg 186  Q
    ||||||||||| ||||| |||||  |||||||||| ||||||| | |||||||||||||||||   |||||||||| |||||||    
T  6798095 agggaaatatgattttt-gaccctctaacataaggaaaatatgatcttttgaccccttatcttctaaaaaagttgcgattatgg 6798013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 9157155 - 9157100
Alignment:
Q  191 ttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||||||||||||| || ||||||||||||||||||| || ||||| | ||||||||    
T  9157155 ttttttgggacacatgacgtcttctcagcaattttgagacgaaagagaccaaaatt 9157100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 39182226 - 39182179
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||||| ||||||||||| ||||||||||  |||||||||||||||    
T  39182226 acttttcgccccctaagtttaaaaatgttgcaattttgaccccctatt 39182179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 26385545 - 26385507
Alignment:
Q  34 cccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  26385545 cccctaagtttcaaaatgttgcgattttggccccctatt 26385507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 29051704 - 29051789
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattat 184  Q
    ||||||||  |||||||||  |||||||| | || ||||| |||| ||| ||||||||||||||||||  ||||||||||| |||||    
T  29051704 atgtttagaaaaatatgctcctttgacccat-aatataagagaaaaatgatttttgaccccttatcttctcaaaaagttgcgattat 29051789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 18754512 - 18754573
Alignment:
Q  258 aataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcctat 319  Q
    ||||||||||||||||||||  ||||| |||| |||||| ||| ||||| |||||| |||||    
T  18754512 aataggggaccaaaatcgcaacattttgaaacttagggggcgaaaagtggagtttaacctat 18754573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 21690474 - 21690413
Alignment:
Q  258 aataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcctat 319  Q
    |||| ||| ||||||| |||  ||||| ||||||||||||||| ||||| ||||||||||||    
T  21690474 aataaggggccaaaattgcaagattttgaaacataggggacgaaaagtgtagtttagcctat 21690413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 23373712 - 23373667
Alignment:
Q  27 ttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||| ||||||||||| ||||||||||| |||| ||||||||||    
T  23373712 ttttcgccccctaagttttaaaatgttgcgattttaaccccctatt 23373667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 5348128 - 5348175
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgacccctta 130  Q
    ||||||| |||||| |||||||||| ||||||||| |||||||||||||    
T  5348128 ggcaaaaatgaccc-tatgtttaggaaaatatgctcttttgacccctta 5348175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 25003005 - 25002961
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttg 62  Q
    ||||| ||||||||| ||||||||||| ||||||||||| |||||    
T  25003005 aaactgtacttttcgccccctaagttttaaaatgttgcgattttg 25002961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 158; Significance: 5e-84; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 18 - 316
Target Start/End: Original strand, 19289 - 19585
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgctt 117  Q
    ||||||||||||||| | ||||||||||||||||||||| |||||||||||||||         |||||||||||||| ||||||||||||||||||||     
T  19289 aaactctacttttcgcctcctaagtttcaaaatgttgcgattttgaccccctattaaaaaaat-ggcaaaagtgacccctatgtttagggaaatatgctc 19387  T
Q  118 ttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctca 217  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19388 ttttgacccct-aacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctca 19486  T
Q  218 gcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    |||||||| |||||||| ||||||||||| |||       |||||||| ||||||||| |  | ||| |||| || ||| ||| || ||||||||||||    
T  19487 gcaatttttggatgaaatgggccaaaattgccatttttttaatagggggccaaaatcgaaacagtttgaaacttaaggggcgaaaaatgcagtttagcc 19585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 61837 - 62049
Alignment:
Q  37 ctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacata 135  Q
    |||||||||||||||||||| ||||| |||||||||         ||||||||||||||  |||||||||||||||||||| |||||||  | |||||||    
T  61837 ctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttgacatcctaacata 61936  T
Q  136 agggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccc--ttttttgggacacgtggcgtcttctcagcaattttgggatgaa 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||    
T  61937 agggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttttgggacacgtggcgtcttctcaacaatttttggatgaa 62036  T
Q  234 aggggccaaaatt 246  Q
    |||||||||||||    
T  62037 aggggccaaaatt 62049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 158; Significance: 5e-84; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 27 - 318
Target Start/End: Complemental strand, 26628316 - 26628023
Alignment:
Q  27 ttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgacc 125  Q
    |||||| || |||||||||||||||||||| ||||| |||||||||         ||||||||||||||  |||||||||||||||||||| ||||||||    
T  26628316 ttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttgacc 26628217  T
Q  126 ccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatttt 225  Q
     | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26628216 tcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatttt 26628117  T
Q  226 gggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    ||||||||||||||||||||| |||        |||||||| ||||||| |||  ||||| ||||||||||| ||| ||||| |||||||||||    
T  26628116 gggatgaaaggggccaaaattgccattttttttaatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgtagtttagccta 26628023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 25 - 317
Target Start/End: Original strand, 8542621 - 8542915
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  8542621 acttttcgtcctctaagtttcaaaatgttgcaattttgaccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttga 8542720  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8542721 cctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgtgacacgtggcgtcttctcagcaatt 8542820  T
Q  224 ttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    |||||||||| || ||||||||| |||        |||||||| |||||||| ||  ||||||||||||||||   || ||||||| ||||||||    
T  8542821 ttgggatgaagggagccaaaattgccatttttattaatagggggccaaaatcacaacattttaaaacatagggagtgaaaagtgcactttagcct 8542915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 48907584 - 48907363
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||| ||||| |||||||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  48907584 acttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaat-ggcaaaagtgaccccctatgtttagggaaatatgctcttttga 48907486  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48907485 cctcctaacataagggaaatatgctttttgaccccttatctttaaaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatt 48907386  T
Q  224 ttgggatgaaaggggccaaaatt 246  Q
    |||||||||||||||||||||||    
T  48907385 ttgggatgaaaggggccaaaatt 48907363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 25 - 319
Target Start/End: Original strand, 4521965 - 4522259
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccc-atatgtttagggaaatatgcttttttga 123  Q
    |||||||| ||  ||||||| ||||||||||| ||||| |||||||||          ||||||||||||| ||||||||||||||||||||| ||||||    
T  4521965 acttttcgccctataagttttaaaatgttgcgattttggccccctattaaaaaaagtagcaaaagtgaccccatatgtttagggaaatatgctcttttga 4522064  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  4522065 cctcttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattattgccccttttttgggacacgtggcgtcttctcagcaatt 4522164  T
Q  224 ttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcctat 319  Q
    || |||||||||||||||||||| |||        |||||||| |||||||  ||  |||||||||||||| || ||| ||||||| ||||||||||    
T  4522165 ttaggatgaaaggggccaaaattgccattttttttaatagggggccaaaat--cactattttaaaacatagagggcgaaaagtgcactttagcctat 4522259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 25 - 316
Target Start/End: Complemental strand, 8339233 - 8338940
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccat-atgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||  ||||| |||||||||         |||||||||||||| | ||||||||||||||||||||||||||    
T  8339233 acttttcgccctctaagtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccttatgtttagggaaatatgcttttttga 8339134  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | ||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  8339133 cctcctaacataatagaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcctcttttttgggacacgtggcgtcttctcagcaatt 8339034  T
Q  224 ttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    |||||||||| |||||||||||| |||        ||||||||  ||||||||||  ||||| ||||||||||| ||| ||||||| |||||||    
T  8339033 ttgggatgaagggggccaaaattgccattttttttaatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 8338940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 25 - 317
Target Start/End: Complemental strand, 3329106 - 3328812
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||| ||||| |||||||||         || |||||||||||  || ||||||||||||||||| ||||||    
T  3329106 acttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggaaaaagtgaccccctaagtttagggaaatatgctcttttga 3329007  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3329006 cctcctaacataagggaaatatgccttttgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatt 3328907  T
Q  224 ttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    || |||||||||||||||||||| | |        |||||||| ||||||| | |  ||||| ||||||||||| ||| ||||||||||||||||    
T  3328906 tttggatgaaaggggccaaaattgctattttttttaatagggggccaaaattgtaacattttgaaacatagggggcgaaaagtgcagtttagcct 3328812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 25 - 316
Target Start/End: Complemental strand, 27853044 - 27852753
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||  ||||| |||||||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  27853044 acttttcgccctctaagtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttga 27852945  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  27852944 cctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccct-ttttgggacacgtggcgtcttctcaacaatt 27852846  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    ||||| |||| |||||||||||| |||       |||||||| | ||||| |||  ||||| ||||||||||| ||| ||||||| |||||||    
T  27852845 ttgggctgaagggggccaaaattgccatttttttaatagggggctaaaattgcaacattttgaaacatagggggcgaaaagtgcactttagcc 27852753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 25 - 318
Target Start/End: Original strand, 13080905 - 13081200
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||| ||||| | |||||||         ||||||||||||||  ||| |||||||||||||||| ||||||    
T  13080905 acttttcgccctctaagtttcaaaatgttgcgattttggctccctattaaaaaaaatggcaaaagtgaccccctatatttagggaaatatgctcttttga 13081004  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||    
T  13081005 cctcataacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttgggacatgtggagtcttctcagcaatt 13081104  T
Q  224 ttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    |||||||||| |||||||||||| |||        |||||||| |||||||||||  ||||| ||||||||| | ||| ||| ||| |||||||||    
T  13081105 ttgggatgaagggggccaaaattgccattttttttaatagggggccaaaatcgcaacattttgaaacataggaggcgaaaagcgcactttagccta 13081200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 93 - 316
Target Start/End: Complemental strand, 28155106 - 28154882
Alignment:
Q  93 cccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccctt 192  Q
    |||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||    
T  28155106 cccatatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatggcccttt 28155007  T
Q  193 ttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacat 291  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||        |||||||| ||||||| |||  ||||| ||||||    
T  28155006 ttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgccattttttttaatagggggccaaaattgcaacattttgaaacat 28154907  T
Q  292 aggggacgagaagtgcagtttagcc 316  Q
    ||||| ||| ||||| |||||||||    
T  28154906 agggggcgaaaagtgtagtttagcc 28154882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 100 - 318
Target Start/End: Complemental strand, 34878746 - 34878527
Alignment:
Q  100 gtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttggg 199  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||    
T  34878746 gtttagggaaatatgctcttttgaccccctaatataagggaaatatgctttttgatcccttatctttacaaaaagtttcaattatggcaccttttttggg 34878647  T
Q  200 acacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggac 298  Q
    ||||||||||||||||||||||||||| ||||||| ||| ||||||| |||        |||||||| |||||||||||  ||||| ||||||||||| |    
T  34878646 acacgtggcgtcttctcagcaattttgagatgaaatgggtcaaaattgccattttttttaatagggggccaaaatcgcaacattttgaaacatagggggc 34878547  T
Q  299 gagaagtgcagtttagccta 318  Q
    ||||||||||||||||||||    
T  34878546 gagaagtgcagtttagccta 34878527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 27 - 245
Target Start/End: Complemental strand, 23428910 - 23428691
Alignment:
Q  27 ttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgacc 125  Q
    |||||| |||||||||||||||||||| |  ||||| |||||||||         ||||||||||||||  |||||||||||||||||||| ||||||||    
T  23428910 ttttcgccccctaagtttcaaaatgttacaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttgacc 23428811  T
Q  126 ccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatttt 225  Q
    || |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||| |||||| |||||||||    
T  23428810 ccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctgagcaatttt 23428711  T
Q  226 gggatgaaaggggccaaaat 245  Q
    ||||||||||||||||||||    
T  23428710 gggatgaaaggggccaaaat 23428691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 25 - 319
Target Start/End: Original strand, 25179589 - 25179882
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||| ||||||||||| ||||| |||||||||          |||||||||||||  |||||||||||||||||||| ||||||    
T  25179589 acttttcgccctctaagttttaaaatgttgcgattttggccccctattaaaaaaaatagcaaaagtgaccccctatgtttagggaaatatgctcttttga 25179688  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||| |||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||    
T  25179689 cctcctaacgtaagagaaatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttttttgggacac--ggcgtcttctcagcaatt 25179786  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcctat 319  Q
    |||||||||| ||||||| |||| |||       |||| ||| |||| ||||||  ||||| ||||||||||| ||| ||||||| ||||||||||    
T  25179787 ttgggatgaagggggccataattgccatttttttaataaggggccaatatcgcaacattttgaaacatagggggcgaaaagtgcactttagcctat 25179882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 32 - 318
Target Start/End: Complemental strand, 28174015 - 28173727
Alignment:
Q  32 gtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgacccctta 130  Q
    ||||| ||||||||||||||||||| ||||| |||||||||         ||||||| ||| ||  |||||||||||||||||||| |||||||||| ||    
T  28174015 gtcccttaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaaatgatcctctatgtttagggaaatatgctcttttgacccccta 28173916  T
Q  131 acataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggat 230  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||| |||||  ||||||||||||||    
T  28173915 acataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttccgagcaattttgggat 28173816  T
Q  231 gaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    |||||||||||||||| | |        |||||||| |||||||||||  ||| | ||||||||||| ||| ||||||| |||||||||    
T  28173815 gaaaggggccaaaattgctactttttttaatagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagccta 28173727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 30155443 - 30155216
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtga-cccatatgtttagggaaatatgct 116  Q
    ||||| || |||||| || |||||||| ||||||||||| |||||| ||||||||         ||||||||||| ||| ||||||||||||||||||||    
T  30155443 aaactttatttttcgccctctaagttttaaaatgttgcgattttgatcccctattaaaaaat--ggcaaaagtgatcccctatgtttagggaaatatgct 30155346  T
Q  117 tttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
     |||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |    
T  30155345 cttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacatggcgtcttcgc 30155246  T
Q  217 agcaattttgggatgaaaggggccaaaatt 246  Q
    |||||||||  |||||||||||||||||||    
T  30155245 agcaattttttgatgaaaggggccaaaatt 30155216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 25 - 318
Target Start/End: Complemental strand, 22448037 - 22447738
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacc-catatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||| ||||||||||  ||||| |||||||||         ||||||||||||| | |||||||||||||||||||| ||||||    
T  22448037 acttttcgccctctaagttttaaaatgttgcaattttggccccctattaaaaaatatggcaaaagtgacctcctatgtttagggaaatatgctcttttga 22447938  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttat----ctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagc 219  Q
    || | ||||||||||||||||||||||||||||||||||    |||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||     
T  22447937 cctcctaacataagggaaatatgctttttgaccccttatatatctttacaaaaagttgcgattatggcccctttttttggatacgtggcgtcttctcaga 22447838  T
Q  220 aattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    |||||| ||||||||||| |||||||| | |        |||||||| ||||||| |||  ||||| ||||||||||| ||| |||||||||||||||||    
T  22447837 aatttttggatgaaagggtccaaaattgctattttttttaatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagccta 22447738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 82 - 319
Target Start/End: Complemental strand, 22500831 - 22500593
Alignment:
Q  82 ggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||||  |||||||||| ||||||||| |||||||| | |||||||||||||||||||||||||| ||||||| ||||||||||||||| |    
T  22500831 ggcaaaagtgaccccctatgtttaggaaaatatgctcttttgacctcctaacataagggaaatatgctttttgatcccttatatttacaaaaagttgcga 22500732  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataa 280  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||||   |       |||||||| ||||||| |||  |    
T  22500731 ttatggtccctttttttggacacgtggcgtcttctcagaaatttttggatgaaaggggctaaaattgatatttttttaatagggggccaaaattgcaata 22500632  T
Q  281 ttttaaaacataggggacgagaagtgcagtttagcctat 319  Q
    |||| ||||||||||| ||| ||||||||||||||||||    
T  22500631 ttttgaaacataggggccgaaaagtgcagtttagcctat 22500593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 27 - 315
Target Start/End: Complemental strand, 40836469 - 40836181
Alignment:
Q  27 ttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnn-ggcaaaagtgacccatatgtttagggaaatatgcttttttgacc 125  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||||          ||||||||||||||  ||||||||||||||||| | ||||||||    
T  40836469 ttttcgccccctaagttttaaaatgttgcgattttgaccccctattaaaaaaaaatggcaaaagtgacccc-atgtttagggaaatatgttcttttgacc 40836371  T
Q  126 ccttaacataagggaaatatgctttttgaccccttatcttt-acaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattt 224  Q
    || ||| |||||||||||||| ||||||||||||||| | | | |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  40836370 ccctaatataagggaaatatgttttttgaccccttatatctcaaaaaaagttgcgattatggccccttttttgggacacgtggcggcttctcagcaattt 40836271  T
Q  225 tgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagc 315  Q
    ||| | |||||||||||||| |  ||       ||||| ||||||||||||||  |||||||||| |||||||||| ||||| ||||||||    
T  40836270 tggaacgaaaggggccaaaa-tcgcatttttttaatagaggaccaaaatcgcaacattttaaaacttaggggacgaaaagtgtagtttagc 40836181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 82 - 246
Target Start/End: Complemental strand, 25022899 - 25022734
Alignment:
Q  82 ggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||||  |||||||||||||||||||| |||||||||| |||||||||||| ||||| ||||||| ||||||||||||||||||||||| |    
T  25022899 ggcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccataacataagggatatatgttttttgaacccttatctttacaaaaagttgcga 25022800  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||||| |||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  25022799 ttatgaccccttttctgggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaatt 25022734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 10743421 - 10743640
Alignment:
Q  26 cttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgac-ccatatgtttagggaaatatgcttttttgac 124  Q
    ||||||| ||||||||||| ||||||||||| ||||| |||||||||         | |||||||||| || |||||||||||||||||||| |||| ||    
T  10743421 cttttcgccccctaagttttaaaatgttgcgattttggccccctattaaaaaaat-gacaaaagtgactccctatgtttagggaaatatgctcttttaac 10743519  T
Q  125 cccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattt 224  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| |||| |||||||| |||| | ||||||||    
T  10743520 ccct-aacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctgggtcacgtggcatcttttgagcaattt 10743618  T
Q  225 tgggatgaaaggggccaaaatt 246  Q
    ||||||||||||||||||||||    
T  10743619 tgggatgaaaggggccaaaatt 10743640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 35 - 234
Target Start/End: Original strand, 3780904 - 3781099
Alignment:
Q  35 ccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacat 134  Q
    |||||||||||||||||||||| |||||||||| ||||         ||||||||||||||  ||||||||||||||||||| ||||||||||| |||||    
T  3780904 ccctaagtttcaaaatgttgcgattttgacccc-tattaaaaaaat-ggcaaaagtgacccc-atgtttagggaaatatgctcttttgacccct-aacat 3780999  T
Q  135 aagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaa 234  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | |||| ||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  3781000 aagggaaatatgctttttgaccctttatctttacaaaaagttgcgaatatgaccccttttttgggacacgtggtgtcttctcagcaattttaggatgaaa 3781099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 46673339 - 46673118
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtga-cccatatgtttagggaaatatgcttttttga 123  Q
    |||||||| ||| |||||||  |||||||||| |||||||||||||||         ||||||||||| ||| |||||||||||||||||||| ||||||    
T  46673339 acttttcgccccttaagttttcaaatgttgcgattttgaccccctattaaaaaaat-ggcaaaagtgatcccctatgtttagggaaatatgctcttttga 46673241  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaa-gttgcaattatggccccttttttgggacacgtggcgtcttctcagcaat 222  Q
    | || |||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| |||||||| | ||||||||||| |||||| ||||||    
T  46673240 ctccctaacataagggaaatatg-tttttgaccccttatctttacaaaaaagttgcgattatgaccccttttctaggacacgtggcatcttctgagcaat 46673142  T
Q  223 tttgggatgaaaggggccaaaatt 246  Q
    ||||||||||||||||||||||||    
T  46673141 tttgggatgaaaggggccaaaatt 46673118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 25 - 317
Target Start/End: Complemental strand, 26633648 - 26633360
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    |||||||  |||||||||||| |||||||||| |||||||||||||||         ||||||| ||||||  || |||||||||||||||| |||||||    
T  26633648 acttttcaccccctaagtttctaaatgttgcgattttgaccccctattaaaaaaat-ggcaaaaatgacccc-atctttagggaaatatgctcttttgac 26633551  T
Q  125 cccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattt 224  Q
    |||| |||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  |||||| |||||||    
T  26633550 ccct-aacataagagaaatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttttttggggcacgtggcaccttctcggcaattt 26633452  T
Q  225 tgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    | ||| ||||||||||||| |  |         ||||||||  ||||||||||  |||||||||| |||||| ||| ||||||||||||||||    
T  26633451 ttggacgaaaggggccaaagtcgcattttttttaatagggggtcaaaatcgcaacattttaaaacttagggg-cgaaaagtgcagtttagcct 26633360  T

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Target: chr3; HSP #23
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 136 - 318
Target Start/End: Complemental strand, 32960823 - 32960643
Alignment:
Q  136 agggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaag 235  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||| ||||||||||||||||    
T  32960823 agggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcct-ttttttgggacacgtggcgtcttctcagtaattttgggatgaaag 32960725  T
Q  236 gggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    ||||||||||| |||       |||||||| ||||||| |||  ||||| ||||||||||| ||| || ||||||||||||||    
T  32960724 gggccaaaattgccatttttttaatagggg-ccaaaattgcaacattttgaaacatagggggcgaaaaatgcagtttagccta 32960643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 25 - 317
Target Start/End: Complemental strand, 33279877 - 33279585
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||||         |||||||||| |||   |||||||| ||||||||| |||||||    
T  33279877 acttttcgccccctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtggccctcttgtttaggaaaatatgctcttttgac 33279778  T
Q  125 cccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    ||| |||||||||||||||||||| |||||| ||||||| ||||||||| ||| | |||||| ||| ||||||| |||||||||||||||||||||||||    
T  33279777 cccctaacataagggaaatatgctcttttgatcccttatatttacaaaa-gttacgattatgaccctttttttgagacacgtggcgtcttctcagcaatt 33279679  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    || |||  ||||||| ||||||| |||       |||||||| | |||||||||  |||| ||||| ||  || ||| ||||||||||||||||    
T  33279678 tttggaccaaaggggtcaaaattgccatttttttaataggggtctaaaatcgcaacatttcaaaacttaaagggcgaaaagtgcagtttagcct 33279585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 34 - 317
Target Start/End: Original strand, 20001731 - 20002012
Alignment:
Q  34 cccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaac 132  Q
    ||||||||||||||||||||||| |||||||||| ||||         | ||||||||||||  |||||||||||||||||||| |||||||||| ||||    
T  20001731 cccctaagtttcaaaatgttgcgattttgacccc-tattaaaaaaagtg-caaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaac 20001828  T
Q  133 ataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatga 232  Q
    |||||||||||||| | | |  |||||||| ||  ||||||||||| | |||||||||| |||||| |||||||||||||||||| ||||||||||||||    
T  20001829 ataagggaaatatgatctcttgccccttatattctcaaaaagttgcgactatggcccctgttttggaacacgtggcgtcttctcaacaattttgggatga 20001928  T
Q  233 aaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    || ||| ||||||| | |       |||||||| |||||||||||  ||||| |||| ||||||| || ||||||||||||||||    
T  20001929 aaaggggcaaaattgctatttttttaatagggggccaaaatcgcaacattttgaaacttagggga-gaaaagtgcagtttagcct 20002012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 22416344 - 22416567
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccat--atgtttagggaaatatgcttttttg 122  Q
    |||||||| ||||||||||| | ||||||||  |||||| ||||||||         ||||||||||||||    ||||||||||| ||||||| |||||    
T  22416344 acttttcg-cccctaagttttataatgttgcaattttgatcccctattaaaaaaaatggcaaaagtgaccccccaatgtttagggatatatgctcttttg 22416442  T
Q  123 accccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaa 221  Q
    |||   |||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||    
T  22416443 accttctaacataaggtaaatatgctcttttgacccattatctttacaaaaagttgcaattatgaccccttatttgggacacgtggcgtcttctcaacaa 22416542  T
Q  222 ttttgggatgaaaggggccaaaatt 246  Q
    |||||||| ||| ||||||||||||    
T  22416543 ttttgggacgaagggggccaaaatt 22416567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 136 - 313
Target Start/End: Original strand, 6927593 - 6927770
Alignment:
Q  136 agggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaag 235  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  6927593 agggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcatcttctgagcaattttgggatgaaag 6927692  T
Q  236 gggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagttta 313  Q
    |||| |||||| | |       |||||||| ||||||| |||  ||| | ||||||||||| ||| |||||| |||||    
T  6927693 gggctaaaattgctatttttttaatagggggccaaaattgcaacattatgaaacatagggggcgaaaagtgctgttta 6927770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 83 - 226
Target Start/End: Complemental strand, 26127139 - 26126997
Alignment:
Q  83 gcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaatt 182  Q
    |||||||||||||  ||||||||||||||||| | |||||||||  ||||||| ||||||||||||||||| |||||||||||||||||||||||| |||    
T  26127139 gcaaaagtgacccc-atgtttagggaaatatgttattttgaccctctaacataggggaaatatgctttttggccccttatctttacaaaaagttgcgatt 26127041  T
Q  183 atggccccttttttgggacacgtggcgtcttctcagcaattttg 226  Q
    |||||| ||||||| ||||  |||||||||||||||||||||||    
T  26127040 atggcctctttttttggacttgtggcgtcttctcagcaattttg 26126997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 83 - 246
Target Start/End: Complemental strand, 26177189 - 26177027
Alignment:
Q  83 gcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaatt 182  Q
    |||||||||||||  ||||| ||||||||||||| |||||||||  ||||||| ||||||||||||||||| | | |||||||||||||||||||| |||    
T  26177189 gcaaaagtgacccc-atgttcagggaaatatgctattttgaccctctaacataggggaaatatgctttttggctcattatctttacaaaaagttgcgatt 26177091  T
Q  183 atggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||| ||||||||||||  ||||| |||||||||||||||||||| ||||  ||||||||||    
T  26177090 atggcctcttttttgggacttgtggcttcttctcagcaattttgggacgaaataggccaaaatt 26177027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 36311163 - 36311384
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnn-ggcaaaagtgacccatatgtttagggaaatatgcttttttga 123  Q
    |||||||||||||||||||| ||||||||||| ||||| |||| ||||          ||||||||||||||  || |||||| |||||| || ||||||    
T  36311163 acttttcgtcccctaagttttaaaatgttgcgattttggcccc-tattaaaaaaaaatggcaaaagtgacccc-atatttaggaaaatatactcttttga 36311260  T
Q  124 ccccttaacataagggaaatatg-ctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaat 222  Q
    |||| |||||||||||||||||| | |||| ||||||||||||  |||| |||||| |||| ||||| | |||||||||||||||| |||||||| ||||    
T  36311261 ccccataacataagggaaatatgacattttaaccccttatcttctcaaatagttgcgattacggcccatattttgggacacgtggcttcttctcaacaat 36311360  T
Q  223 tttgggatgaaaggggccaaaatt 246  Q
    ||||||| ||||||||||||||||    
T  36311361 tttgggacgaaaggggccaaaatt 36311384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 82 - 246
Target Start/End: Complemental strand, 46387809 - 46387652
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaat 181  Q
    ||||||||||||||  ||||||| ||||| ||||| |||||| ||| ||||||||||||||||||       ||||||||||||| |||||| | |||||    
T  46387809 ggcaaaagtgacccccatgtttaaggaaacatgctcttttgatcccctaacataagggaaatatg-------accccttatctttccaaaaactagcaat 46387717  T
Q  182 tatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||| ||||||| |||||||||||    
T  46387716 tatggccccttttttggaacacatggcgtcttctcatcaattttgagatgaaatgggccaaaatt 46387652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 97 - 234
Target Start/End: Original strand, 48860786 - 48860924
Alignment:
Q  97 tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccctttt-t 195  Q
    |||||||||||||||||||| ||||||||   |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||  ||||||| |    
T  48860786 tatgtttagggaaatatgctattttgaccttctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgatcccttttct 48860885  T
Q  196 tgggacacgtggcgtcttctcagcaattttgggatgaaa 234  Q
     ||| |||||||| |||||| || |||||||||||||||    
T  48860886 gggggcacgtggcatcttctgagtaattttgggatgaaa 48860924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 23320446 - 23320593
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgcttt-ttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||| | || | | |||||  ||||||||  ||||||||||| ||||||||||||||| |    
T  23320446 atgtttagggaaatatgctcttttgacccct-aacataagagaagtctgatatattgacttcttatcttctcaaaaagttgctattatggcccctttt-t 23320543  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  23320544 gggacatgtggcgtcttttcagcaattttgggacgaaaggggccaaaatt 23320593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 3821004 - 3821103
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaa 234  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| |||||| |||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  3821004 agggaaatatgctcttttgaccctttatctttacaaaaagttgcgattatgaccccttttttgggacatgtggtgtcttctcagcaattttaggatgaaa 3821103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 98 - 318
Target Start/End: Original strand, 1743334 - 1743555
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||||| |||||| || |||||||||| |||||||||| |||| || | |||||||||||||||||  ||||||||||| || | ||||  | ||||    
T  1743334 atgtttaggaaaatatactcttttgaccccctaacataagg-aaatgtgatcttttgaccccttatcttctcaaaaagttgcgataagggccattgtttt 1743432  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggg 295  Q
    |||||| ||||||||||||||||||||||| ||  |||||| | |||||| | |        ||||||||||||||||||||  |||||||||| |||||    
T  1743433 gggacatgtggcgtcttctcagcaattttgtgacaaaagggactaaaattgctattttttataataggggaccaaaatcgcaacattttaaaacttaggg 1743532  T
Q  296 gacgagaagtgcagtttagccta 318  Q
      ||| |||||||||||||||||    
T  1743533 agcgaaaagtgcagtttagccta 1743555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 9496451 - 9496312
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttaca-aaaagttgcaa 180  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||  |||||||| |||||||||||||||| ||||||||||||||| ||||||||| |    
T  9496451 ggcaaaagtgacc-acatgtttagggaaatatgctcttttgaccctctaacataaaggaaatatgctttttgtccccttatctttacaaaaaagttgcga 9496353  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaa 221  Q
      ||| ||| | ||||||| || |||||||| |||||||||    
T  9496352 ggatgacccttgttttggggcatgtggcgtcctctcagcaa 9496312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 98 - 314
Target Start/End: Original strand, 32315004 - 32315219
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||||||||||||| | |||||||||| |||||| ||||||||||  | ||||||||||||||||   ||||||| ||| || ||||||| | ||||    
T  32315004 atgtttagggaaatatgttcttttgaccccctaacatgagggaaatattatattttgaccccttatctcctcaaaaagctgcgat-atggcccatgtttt 32315102  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacatagggg 296  Q
     ||||| |||||||||||||| ||||||||||| ||||||  ||||||||  ||       |||| ||||| |||||||||  |||||||||| || |||    
T  32315103 aggacatgtggcgtcttctcaacaattttgggacgaaaggacccaaaattgtcatttttttaata-gggacgaaaatcgcaacattttaaaacttaaggg 32315201  T
Q  297 acgagaagtgcagtttag 314  Q
    |||| |||||||||||||    
T  32315202 acgaaaagtgcagtttag 32315219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 33105026 - 33105174
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||||||||||||||| |||||| | || | |||||| |||||||| | |||||| ||||| ||||  ||||||||| | |||||  ||| | ||||    
T  33105026 atgtttagggaaatatgctcttttgatctct-atcataagagaaatatgttattttgatcccttttcttcccaaaaagtttcgattatttcccatgtttt 33105124  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||    
T  33105125 gggacacgtggcgtcttctcatcaattttgggatgaaataggccaaaatt 33105174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 93 - 236
Target Start/End: Complemental strand, 35201218 - 35201076
Alignment:
Q  93 cccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccct 191  Q
    |||| |||||| |||||| ||||| |||||||||  |||||||| ||||||||| | |||||||||||||||||  ||||||||| | || ||||| |||    
T  35201218 cccacatgttttgggaaacatgctcttttgaccc--taacataaaggaaatatgatattttgaccccttatcttctcaaaaagttacgatcatggctcct 35201121  T
Q  192 tttttgggacacgtggcgtcttctcagcaattttgggatgaaagg 236  Q
     |||| ||||| ||||| |||||||| ||||||||||||||||||    
T  35201120 gttttaggacatgtggcatcttctcaacaattttgggatgaaagg 35201076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 31039197 - 31039048
Alignment:
Q  97 tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttt-tgaccccttatctttacaaaaagttgcaattatggccccttttt 195  Q
    |||||| ||| ||| ||||| ||||||||||| |||||| |||||||||| | |  |||||| |||||||   |||||||||| ||||| ||||||||||    
T  31039197 tatgttaaggaaaacatgctcttttgacccct-aacatatgggaaatatgatctaatgaccctttatcttcttaaaaagttgcgattatagccccttttt 31039099  T
Q  196 tgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    | | ||| |||||||||||||||||||||| ||| ||||| ||||||||||    
T  31039098 tagaacatgtggcgtcttctcagcaatttttggacgaaagaggccaaaatt 31039048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 82 - 200
Target Start/End: Original strand, 4775919 - 4776038
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||||  ||||||||||||||||||| |||||||||| | ||||| |||||||||| |  ||||| ||||||||||   |||||||||| |    
T  4775919 ggcaaaagtgacccccatgtttagggaaatatgctattttgaccccctcacatacgggaaatatgatcctttgatcccttatcttcttaaaaagttgcga 4776018  T
Q  181 ttatggccccttttttggga 200  Q
    ||||||||| | ||||||||    
T  4776019 ttatggcccttgttttggga 4776038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 43668571 - 43668641
Alignment:
Q  156 cccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttg 226  Q
    ||||||| ||||||||||||||| |||||| ||||| |||||||||| |||||||||||||||||||||||    
T  43668571 cccttatttttacaaaaagttgcgattatgacccctgttttgggacatgtggcgtcttctcagcaattttg 43668641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 20626891 - 20626794
Alignment:
Q  148 tttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaat 245  Q
    ||||||| || |||||||||||||||||| | |||||| | |||||||||||||| |||||||||||| | |||||||||   |||||||||||||||    
T  20626891 tttttgatccattatctttacaaaaagttacgattatgactccttttttgggacatgtggcgtcttcttaacaattttggagcgaaaggggccaaaat 20626794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 244
Target Start/End: Original strand, 25336427 - 25336587
Alignment:
Q  84 caaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatg-ctttttgaccccttatctttacaaaaagttgcaatt 182  Q
    ||||||||| || ||| ||||||||| |||||| |||||||||| |||||||||||||||||| | ||||||||  ||| |||  ||||||||||| |||    
T  25336427 caaaagtgaacc-tatatttagggaattatgctcttttgaccccctaacataagggaaatatgaccttttgaccttttaacttctcaaaaagttgcgatt 25336525  T
Q  183 atggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaa 244  Q
    || ||| || ||||| |||| | | |||||| ||||||||||||  | ||||| ||||||||    
T  25336526 attgcctctgttttgagacatgcgacgtcttttcagcaattttgatacgaaagaggccaaaa 25336587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 32463588 - 32463516
Alignment:
Q  149 ttttgaccccttatctttacaaaaa-gttgcaattatggccccttttttgggacacgtggcgtcttctcagca 220  Q
    ||||||||||||||||||||||||| ||||| ||| || ||| ||||||||||||||||||| ||||||||||    
T  32463588 ttttgaccccttatctttacaaaaaagttgcgattttgaccctttttttgggacacgtggcggcttctcagca 32463516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 220
Target Start/End: Complemental strand, 24312843 - 24312760
Alignment:
Q  140 aaatatgct-ttttgaccccttatctttacaaaa-agttgcaattatggcccc-ttttttgggacacgtggcgtcttctcagca 220  Q
    ||||||||| ||||| ||| |||||||||||||| |||||||||||||||||| |||||||||||| |||||| ||||||||||    
T  24312843 aaatatgctcttttgcccctttatctttacaaaatagttgcaattatggcccccttttttgggacatgtggcgacttctcagca 24312760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 83 - 246
Target Start/End: Complemental strand, 49658013 - 49657864
Alignment:
Q  83 gcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaat 181  Q
    |||||||||||||| || |||||||||||||||| ||||||||||| ||||||||| ||||||| | |||||||||| |             ||||| ||    
T  49658013 gcaaaagtgaccca-atatttagggaaatatgctcttttgacccct-aacataaggaaaatatgatcttttgaccccat-------------gttgcgat 49657929  T
Q  182 tatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||||||| ||||  ||||| || |||| |||||||||||||||||||||| |||| ||||||    
T  49657928 tatggcccctgttttatgacacatgacgtcatctcagcaattttgggatgaaatgggctaaaatt 49657864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 36033738 - 36033791
Alignment:
Q  164 tttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctca 217  Q
    ||||||||||||||||||| ||||||||   |||||||||||||||||||||||    
T  36033738 tttacaaaaagttgcaattttggcccctgagttgggacacgtggcgtcttctca 36033791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 9662415 - 9662347
Alignment:
Q  149 ttttgaccccttatctttacaaaaagttgcaattatggcc-ccttttttgggacacgtggcgtcttctc 216  Q
    ||||||||||||||||||||||||||||||||   ||||| ||| |||| ||||||||||| |||||||    
T  9662415 ttttgaccccttatctttacaaaaagttgcaacattggcctcctgttttaggacacgtggcatcttctc 9662347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 36311209 - 36311150
Alignment:
Q  258 aataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    |||||||| |||||||||||  |||||||||| |||||||||| |||||||||||||||||    
T  36311209 aatagggg-ccaaaatcgcaacattttaaaacttaggggacgaaaagtgcagtttagccta 36311150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 8338951 - 8338998
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||||| |||||| |||||||||||||||| |||||||||||||||    
T  8338951 acttttcgccccctatgtttcaaaatgttgcgattttgaccccctatt 8338998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 218
Target Start/End: Complemental strand, 34296564 - 34296445
Alignment:
Q  101 tttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggc-cccttttttgg 198  Q
    |||| ||||||||||| ||||||||| ||| | | ||||||||| ||| | || || | ||||||||  |||||||||||||| |||| |||| ||||||    
T  34296564 tttatggaaatatgctcttttgaccctttatctttagggaaataagctctcttaactctttatctttcaaaaaagttgcaattttggctccctgttttgg 34296465  T
Q  199 gacacgtggcgtcttctcag 218  Q
     ||||||| |||||||||||    
T  34296464 aacacgtgacgtcttctcag 34296445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 2683091 - 2683153
Alignment:
Q  156 cccttatctttacaaaaag-ttgcaattatggccccttttttgggacacgtggcgtcttctca 217  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||||| || | |||||||    
T  2683091 cccttatctttacaaaaaaattgcgattatggccccttttttgggacacgcggtggcttctca 2683153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 20626755 - 20626804
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgacccc 67  Q
    ||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  20626755 aaactgtacttttcgtcccctaagtttcaaaatgttacgattttggcccc 20626804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 32960889 - 32960798
Alignment:
Q  39 aagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgacccctta 130  Q
    |||||||||||||||||| |||||  ||||||||         ||||||||||||||  |||||||||||||||||||| |||||||||||||    
T  32960889 aagtttcaaaatgttgcgattttggtcccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgct-ttttgacccctta 32960798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 48743302 - 48743228
Alignment:
Q  149 ttttgaccccttatctttacaaaaa---gttgcaattatggccccttttttgggacacgtggcgtcttctcagca 220  Q
    ||||||||| |||||||||||||||   ||||  ||| || |||||||||||||||| |||||| ||||||||||    
T  48743302 ttttgacccattatctttacaaaaaaaagttgtgattttgaccccttttttgggacatgtggcggcttctcagca 48743228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 20001993 - 20001954
Alignment:
Q  33 tcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  20001993 tcccctaagtttcaaaatgttgcgattttggccccctatt 20001954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 26633372 - 26633418
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||||    
T  26633372 acttttcg-cccctaagttttaaaatgttgcgattttgaccccctatt 26633418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 34296596 - 34296529
Alignment:
Q  101 tttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatcttta 167  Q
    |||||||||||||||| |||||||||  |||| | | ||||||||||| ||||||||| |||||||||    
T  34296596 tttagggaaatatgctcttttgaccctctaactttatggaaatatgctcttttgaccctttatcttta 34296529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 18388933 - 18388871
Alignment:
Q  84 caaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatg 146  Q
    ||||||||||||  ||||| ||||||||||||| |||||||||| || ||||||  |||||||    
T  18388933 caaaagtgacccccatgttaagggaaatatgctcttttgaccccctaccataagataaatatg 18388871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 25179636 - 25179575
Alignment:
Q  258 aataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcctat 319  Q
    |||||||| |||||||||||  |||||||||| ||| || ||| ||||| ||||||||||||    
T  25179636 aatagggggccaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagcctat 25179575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 40836191 - 40836228
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttg 62  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  40836191 acttttcgtcccctaagttttaaaatgttgcgattttg 40836228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 3820983 - 3821026
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccc 126  Q
    ||||||||||||||  ||||||||||||||||||| |||||||||    
T  3820983 ggcaaaagtgacccc-atgtttagggaaatatgctcttttgaccc 3821026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 40836424 - 40836484
Alignment:
Q  258 aataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    ||||||||  ||||||||||  |||||||||| |||||| ||| || ||||||||||||||    
T  40836424 aatagggggtcaaaatcgcaacattttaaaacttagggggcgaaaaatgcagtttagccta 40836484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 158; Significance: 5e-84; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 18 - 317
Target Start/End: Original strand, 24196265 - 24196566
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccc-atatgtttagggaaatatgct 116  Q
    |||||| |||||||| ||||||||||||||||||||||| ||||| ||| |||||         |||||||||||||| |||||||||| ||||||||||    
T  24196265 aaactccacttttcgccccctaagtttcaaaatgttgcgattttggccctctattaaaaaaaatggcaaaagtgaccccatatgtttagagaaatatgct 24196364  T
Q  117 tttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
     |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  24196365 cttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgaatatggccccttttttgggacacgtggcgtcttctc 24196464  T
Q  217 agcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagc 315  Q
    ||||||||| ||| |||||||||||||||| |||        |||||||| |||||||||||  ||||||||||||||| | ||| ||||||||||||||    
T  24196465 agcaatttttggacgaaaggggccaaaattgccattttttttaatagggggccaaaatcgcaacattttaaaacataggaggcgaaaagtgcagtttagc 24196564  T
Q  316 ct 317  Q
    ||    
T  24196565 ct 24196566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 82 - 316
Target Start/End: Complemental strand, 19078160 - 19077926
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaat 181  Q
    |||||||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  19078160 ggcaaaagtgacccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgat 19078061  T
Q  182 tatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataat 281  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||       |||||||||| |||||   |  ||    
T  19078060 tatgaccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgccatttttttaataggggacaaaaattataacat 19077961  T
Q  282 tttaaaacataggggacgagaagtgcagtttagcc 316  Q
    ||||||||||||||||||| ||||| |||||||||    
T  19077960 tttaaaacataggggacgaaaagtgtagtttagcc 19077926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 82 - 316
Target Start/End: Complemental strand, 19126050 - 19125816
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaat 181  Q
    |||||||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  19126050 ggcaaaagtgacccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgat 19125951  T
Q  182 tatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataat 281  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||       |||||||||| |||||   |  ||    
T  19125950 tatgaccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgccatttttttaataggggacaaaaattataacat 19125851  T
Q  282 tttaaaacataggggacgagaagtgcagtttagcc 316  Q
    ||||||||||||||||||| ||||| |||||||||    
T  19125850 tttaaaacataggggacgaaaagtgtagtttagcc 19125816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 25 - 316
Target Start/End: Original strand, 3616810 - 3617102
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacc-catatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||| ||||| |||||||||         ||||||||||||| | |||||||||||||||||||| ||||||    
T  3616810 acttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgacctcctatgtttagggaaatatgctcttttga 3616909  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3616910 cctcttcacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatt 3617009  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    || |||| ||||||||||||||| | |       |||||||| | ||||| |||  ||||| ||||||||||| ||| ||||| |||||||||    
T  3617010 tttggataaaaggggccaaaattgctatttatttaatagggggcgaaaattgcaacattttgaaacatagggggcgaaaagtgaagtttagcc 3617102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 25 - 317
Target Start/End: Complemental strand, 4059815 - 4059521
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||| ||||  |||||||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  4059815 acttttcgccctctaagtttcaaaatgttgcgattttagccccctattaaaaaaaatggcaaaagtgaccctctatgtttagggaaatatgctcttttga 4059716  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||    
T  4059715 cctcctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatggtccattttttgggacacgtggcgtcttctcagcaatt 4059616  T
Q  224 ttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    ||||||||||||||||||||||| | |        |||||||| |||||||||||  ||||| ||||||||||| ||| ||||||| ||||||||    
T  4059615 ttgggatgaaaggggccaaaattgcaattttttttaatagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcct 4059521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 25 - 320
Target Start/End: Complemental strand, 46432509 - 46432212
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| ||| ||||||||||||||||||| ||||| |||||||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  46432509 acttttcgccccttaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttga 46432410  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||| |||||  |||||||    
T  46432409 ccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttccgagcaatt 46432310  T
Q  224 ttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcctatg 320  Q
    ||||||||||||||||||||||| | |        |||||||| |||||||||||  ||| | ||||||||||| ||| ||||||| |||||||||||    
T  46432309 ttgggatgaaaggggccaaaattgctattttttttaatagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcctatg 46432212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 24961964 - 24962186
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||| | ||||| |||||||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  24961964 acttttcgccctctaagtttcaaaatgttgtgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttga 24962063  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24962064 cctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatt 24962163  T
Q  224 ttgggatgaaaggggccaaaatt 246  Q
    ||  |||||||||| ||||||||    
T  24962164 ttttgatgaaagggaccaaaatt 24962186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 97 - 315
Target Start/End: Complemental strand, 48472083 - 48471864
Alignment:
Q  97 tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    |||||||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  48472083 tatgtttagggaaatatgctcttttgacctcctaacataagagaaatatgctttttgaccccttatctttacaaaaagttgcgattatggtccctttttt 48471984  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggg 295  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||        |||||||| |||||||||||  ||||| ||||||||||    
T  48471983 gggacacgtggcgtcttctcagcaattttgggatgaagggggccaaaattgccattttttttaatagggggccaaaatcgcaacattttgaaacataggg 48471884  T
Q  296 gacgagaagtgcagtttagc 315  Q
    ||||| ||||||| ||||||    
T  48471883 gacgaaaagtgcactttagc 48471864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 99 - 318
Target Start/End: Complemental strand, 27093070 - 27092851
Alignment:
Q  99 tgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgg 198  Q
    |||||||||||||||||| |||||||||| ||| ||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27093070 tgtttagggaaatatgctcttttgaccccctaatatatgtgaaatatgttttttgaccccttatctttacaaaaagttgcaattatggccccttttttgg 27092971  T
Q  199 gacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacatagggga 297  Q
     ||||||||||||||||||||||||||||||||||| ||||||||||| |||        |||||||| ||||||||| |  ||||| |||||||||||     
T  27092970 aacacgtggcgtcttctcagcaattttgggatgaaatgggccaaaattgccattttttttaatagggg-ccaaaatcgtaacattttgaaacataggggg 27092872  T
Q  298 cgagaagtgcagtttagccta 318  Q
    |||||||||||||||||||||    
T  27092871 cgagaagtgcagtttagccta 27092851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 24749808 - 24750031
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnn-ggcaaaagtgaccca-tatgtttagggaaatatgcttttttg 122  Q
    ||||||||||| |||||||||||||||||||| ||||| ||| |||||          ||||||||||||||  |||||||||||||||||||| |||||    
T  24749808 acttttcgtcctctaagtttcaaaatgttgcgattttggcccactattaaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttg 24749907  T
Q  123 accccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaat 222  Q
    ||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||| ||||||    
T  24749908 acctcataacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccattttttggaacacgtggcgtcttcttagcaat 24750007  T
Q  223 tttgggatgaaaggggccaaaatt 246  Q
    |||  |||||||||||||||||||    
T  24750008 ttttagatgaaaggggccaaaatt 24750031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 18 - 315
Target Start/End: Complemental strand, 43706953 - 43706655
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgct 116  Q
    |||||| |||||| | ||||||| ||| ||||||||||| ||||| |||||||||         ||||||||||||||  ||||||||||||||||||||    
T  43706953 aaactccactttttgccccctaatttttaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgct 43706854  T
Q  117 tttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
     ||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||  |||||||||||| ||||||     
T  43706853 cttttgacccat-aacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttccgggacacgtggcatcttctg 43706755  T
Q  217 agcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagc 315  Q
    |||||||||||||||||||||||||||||| | |        |||||||| |||||||||||  ||| | ||||||||||| ||| ||||||||||||||    
T  43706754 agcaattttgggatgaaaggggccaaaattgctattttttttaatagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcagtttagc 43706655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 18 - 318
Target Start/End: Original strand, 2425229 - 2425529
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgctt 117  Q
    |||||| |||||| | | ||||||||||||||||||||| |||||||||||||||         |||||||||||||| ||||||||||||| ||||||     
T  2425229 aaactccactttttgccacctaagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgacccctatgtttagggaa-tatgctc 2425327  T
Q  118 ttttgaccccttaacataagggaaatatgctttttg-accccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
    |||||||||  |||||||||||||||||| |||||  | ||||||||||||||||||||||| |||||| ||| |||| ||||||||||||| ||||||     
T  2425328 ttttgaccctctaacataagggaaatatgttttttttaacccttatctttacaaaaagttgcgattatgacccattttctgggacacgtggcatcttctg 2425427  T
Q  217 agcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    |||||||||||||||||| ||||||||||| | |       |||||||| |||||||||||  ||| | ||||||||||| | | |||||||||||||||    
T  2425428 agcaattttgggatgaaatgggccaaaattgctatttttttaatagggggccaaaatcgcaacattatgaaacatagggggcaaaaagtgcagtttagcc 2425527  T
Q  317 ta 318  Q
    ||    
T  2425528 ta 2425529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 28920944 - 28920727
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| ||||||||||||||||||||||| ||||| |||||||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  28920944 acttttcgccccctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttga 28920845  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccc-ttttttgggacacgtggcgtcttctcagcaat 222  Q
    || | ||||||||      ||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||| |||||||||||||||||||    
T  28920844 cctcctaacataa------tatgctttttgaccccttatctttacaaaaagtggcgattatggcccccttttttgggacatgtggcgtcttctcagcaat 28920751  T
Q  223 tttgggatgaaaggggccaaaatt 246  Q
    ||| |||||||||||| |||||||    
T  28920750 ttttggatgaaaggggtcaaaatt 28920727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 83 - 246
Target Start/End: Original strand, 29676148 - 29676312
Alignment:
Q  83 gcaaaagtga-cccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaat 181  Q
    |||||||||| ||| |||||||||||||||||||| || ||| | | ||||||||| ||||||||||||||||||||||||||||| |||||||||| ||    
T  29676148 gcaaaagtgatcccctatgtttagggaaatatgctcttgtgatctcctaacataagtgaaatatgctttttgaccccttatctttataaaaagttgcgat 29676247  T
Q  182 tatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||||||||||||||||||||||||| ||||||| |||||||  |||||||||||||||||||    
T  29676248 tatggccccttttttgggacacgtggcgccttctcaacaattttttgatgaaaggggccaaaatt 29676312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 318
Target Start/End: Complemental strand, 51719420 - 51719121
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccat-atgtttagggaaatatgct 116  Q
    |||||| |||||| ||| ||||||||||||||||||||| ||||| | |||||||         |||||||||||||| | |||||||||||||||||||    
T  51719420 aaactccactttttgtcacctaagtttcaaaatgttgcgattttggctccctattaaaaaaat-ggcaaaagtgaccccttatgtttagggaaatatgct 51719322  T
Q  117 tttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
     |||||| ||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||| |||||| |||||||| || || ||||||| ||||||     
T  51719321 cttttgatcccctaacataaggaaaatatgtttttt-accccttatctttacaaaaagttgcgattatgaccccttttctgagatacgtggcatcttctg 51719223  T
Q  217 agcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    ||||||||||| ||||||||| |||||||| | |       |||||||| ||||||| |||  ||| | |||||||| || ||| |||||||||||||||    
T  51719222 agcaattttggaatgaaagggaccaaaattgctatttttttaatagggggccaaaattgcaacattatgaaacatagagggcgaaaagtgcagtttagcc 51719123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 82 - 315
Target Start/End: Complemental strand, 16551880 - 16551645
Alignment:
Q  82 ggcaaaagtgacccata-tgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgca 179  Q
    ||||||||||||||  | |||||||||||||||||| |||||||||| |||||| ||  ||||||| | |||||||||||||||||  |||||||||||     
T  16551880 ggcaaaagtgacccccaatgtttagggaaatatgctcttttgaccccctaacatcagacaaatatgatcttttgaccccttatcttctcaaaaagttgcg 16551781  T
Q  180 attatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcata 279  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||       |||||||| ||||||| |||      
T  16551780 attatggcccttgttttgggacacgtggcgtcttctcagcaattttgggacgaaaggtgccaaaattaccatttttttaatagggggccaaaattgcaac 16551681  T
Q  280 attttaaaacataggggacgagaagtgcagtttagc 315  Q
    ||||| |||| ||| || ||| |||||||| |||||    
T  16551680 attttgaaacttagagggcgaaaagtgcagattagc 16551645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 2657804 - 2657584
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgac-ccatatgtttagggaaatatgcttttttga 123  Q
    |||||||| ||||||||||||||||| ||||| |||||||||| ||||         |||||||||||| || |||||||||||||||||||| | ||||    
T  2657804 acttttcgccccctaagtttcaaaatattgcgattttgacccc-tattaaaaaaaatggcaaaagtgactccctatgtttagggaaatatgctctattga 2657706  T
Q  124 ccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaat 222  Q
    || | |||||||||| ||||||||| ||||||||||||||||||  |||||||||  |||||| ||| |||||| ||||||||||||| |||||| ||||    
T  2657705 ccgcctaacataagg-aaatatgctcttttgaccccttatcttttaaaaaagttgtgattatgaccctttttttaggacacgtggcgt-ttctcaacaat 2657608  T
Q  223 tttgggatgaaaggggccaaaatt 246  Q
    |||||||  |||||||||||||||    
T  2657607 tttgggacaaaaggggccaaaatt 2657584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 47685186 - 47685334
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttg 197  Q
    ||||||| ||||||||||| |||||| ||| |||||||||| ||||||| |||||||||||||| |||||||||||||||| || ||| || |||||||     
T  47685186 atgtttaaggaaatatgctattttgatcccctaacataaggaaaatatgttttttgaccccttacctttacaaaaagttgcgataatgacctctttttta 47685285  T
Q  198 ggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||||||||||||||| ||||||||||||  ||||||||| ||||||    
T  47685286 ggacacgtggcgtcttcttagcaattttgggccgaaaggggcaaaaatt 47685334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 84 - 245
Target Start/End: Complemental strand, 29182234 - 29182072
Alignment:
Q  84 caaaagtgacccat-atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaat 181  Q
    |||||||||||| | |||||||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||||||||  || |||||||| ||    
T  29182234 caaaagtgaccccttatgtttagagaaatatgctcttttgacccct-aacataagggaaatatgatcttttgaccccttatcttctcataaagttgcgat 29182136  T
Q  182 tatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaat 245  Q
    |||||||| ||||||| ||||||| |||||||||||||||||||| || ||||| |||||||||    
T  29182135 tatggcccattttttgagacacgttgcgtcttctcagcaattttgagacgaaagaggccaaaat 29182072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 98 - 234
Target Start/End: Complemental strand, 4455262 - 4455125
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgcttttt-gaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||||| ||||||||| |||||||||| |||||||||||||||||| ||||| |||| ||||||||  ||||||||||| |||||||||  ||||||    
T  4455262 atgtttaggaaaatatgctcttttgaccccgtaacataagggaaatatgattttttgaccacttatcttctcaaaaagttgcgattatggccattttttt 4455163  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaa 234  Q
    |||||| ||||| |||||||||||||||||||| ||||    
T  4455162 gggacatgtggcatcttctcagcaattttgggacgaaa 4455125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 98 - 318
Target Start/End: Original strand, 16971935 - 16972156
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatg-ctttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||||||| ||||||| ||| |||||| |||||||||||||||||| | ||||||| | |||||||  |||||  |||| |||||| ||||| ||||    
T  16971935 atgtttagggatatatgctctttagaccccctaacataagggaaatatgaccttttgactctttatcttctcaaaatattgcgattatgacccctatttt 16972034  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacatagggg 296  Q
    ||||||| |||||| |||| ||||||||||| | |||| |||||||||||  ||       |||||||| | |||||||||  |||||||||| ||||||    
T  16972035 gggacacatggcgttttcttagcaattttggaacgaaatgggccaaaattgtcatttttttaatagggggctaaaatcgcaacattttaaaacttagggg 16972134  T
Q  297 acgagaagtgcagtttagccta 318  Q
     ||| |||||||||||||||||    
T  16972135 gcgaaaagtgcagtttagccta 16972156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 84 - 246
Target Start/End: Complemental strand, 2260611 - 2260449
Alignment:
Q  84 caaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaatt 182  Q
    ||||||||||||  |||||||| ||||||||||||||||||||| ||| |||||||||||||| | |||| ||||||||||||  ||||||||||| |||    
T  2260611 caaaagtgacccc-atgtttagtgaaatatgcttttttgaccccataatataagggaaatatgatattttaaccccttatcttctcaaaaagttgcgatt 2260513  T
Q  183 atggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
     || |||||||||||||| ||||||||||||||||| |||||| | | |||| || ||||||||    
T  2260512 ctgaccccttttttgggatacgtggcgtcttctcagtaattttagaacgaaatggaccaaaatt 2260449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 18606976 - 18606755
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccat-atgtttagggaaatatgcttttttga 123  Q
    |||||||| ||||||||||| ||||||||| | |||||||||||||||         || ||||||||||| | ||||||||||||||||||| ||||||    
T  18606976 acttttcgacccctaagttttaaaatgttgtgattttgaccccctattaaaaaact-ggaaaaagtgacccctcatgtttagggaaatatgctcttttga 18606878  T
Q  124 ccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaat 222  Q
    |||| |||||||||| ||||| | | |||||||||||||||||  ||||||||||  |||||  ||| | ||||||||||||| |||||| ||||||||     
T  18606877 ccccataacataaggaaaatacgatcttttgaccccttatcttctcaaaaagttgtgattatcacccttgttttgggacacgtagcgtctgctcagcaa- 18606779  T
Q  223 tttgggatgaaaggggccaaaatt 246  Q
    || |||| ||||||||||||||||    
T  18606778 ttcgggacgaaaggggccaaaatt 18606755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 85 - 246
Target Start/End: Complemental strand, 31084844 - 31084683
Alignment:
Q  85 aaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattat 184  Q
    ||||||||||| ||| |||| ||||||||  | |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||| | |||||    
T  31084844 aaaagtgacccctatttttatggaaatataatattttgaccccctaacatatggaaaatatgctttttgaccccttatctttacaaaaagtttcgattat 31084745  T
Q  185 ggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    | |||| ||||||||||| |||| |  |||||| ||||||||| | ||||  ||||||||||    
T  31084744 gaccccctttttgggacatgtggggctttctcaacaattttggaacgaaataggccaaaatt 31084683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 36 - 246
Target Start/End: Original strand, 22786053 - 22786260
Alignment:
Q  36 cctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtga-cccatatgtttagggaaatatgcttttttgaccccttaacat 134  Q
    ||||||||| ||||||||||| |||||||||| ||||         ||||||||||| |||  ||||||||||||||||||| |||||||  || |||||    
T  22786053 cctaagttttaaaatgttgcgattttgacccc-tattaaaaaaaatggcaaaagtgagcccccatgtttagggaaatatgctcttttgacatct-aacat 22786150  T
Q  135 aagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaa 233  Q
    ||| |||||||| | |||||||||||||||||  ||||||||||   | ||||||||| ||||||||||| |||||||||||||||||||||| || |||    
T  22786151 aagtgaaatatgatcttttgaccccttatcttctcaaaaagttg---tgatggcccctgttttgggacacttggcgtcttctcagcaattttgagacgaa 22786247  T
Q  234 aggggccaaaatt 246  Q
    | |||||||||||    
T  22786248 atgggccaaaatt 22786260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 85 - 314
Target Start/End: Complemental strand, 26605507 - 26605281
Alignment:
Q  85 aaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattat 184  Q
    |||| |||| || ||||||||||||||||||| ||||||||||| ||||||||  ||||||| |||||||   ||||| ||||||||||||| | |||||    
T  26605507 aaaaatgactcacatgtttagggaaatatgctattttgacccct-aacataaga-aaatatgttttttgatatcttatttttacaaaaagttacgattat 26605410  T
Q  185 ggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataatttt 284  Q
    |  |  ||||||||||||||| ||||||||| ||||||||||| || ||||||| |||||||| ||       ||||| ||| ||||||||||  |||||    
T  26605409 gatcgattttttgggacacgtagcgtcttcttagcaattttggaataaaagggg-caaaattttcatttttttaatagaggatcaaaatcgcaacatttt 26605311  T
Q  285 aaaacataggggacgagaagtgcagtttag 314  Q
    ||||| |||||| | | ||||||| |||||    
T  26605310 aaaacttaggggtcaaaaagtgcaatttag 26605281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 82 - 246
Target Start/End: Original strand, 9387761 - 9387929
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttga-ccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgca 179  Q
    ||||||||| ||||  ||||||| ||||||||||| |||||| |||| |||||||||||||||||  | ||||||||| |||||||  |||||| ||||     
T  9387761 ggcaaaagtaacccccatgtttaaggaaatatgctcttttgacccccctaacataagggaaatataatcttttgaccctttatcttctcaaaaatttgcg 9387860  T
Q  180 attatggccccttttttgggacacgtggcg--tcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||| | ||| |||||||||| ||||||  |||||||| ||||||||||| ||||||  ||||||||    
T  9387861 attatgacacctgttttgggacatgtggcgtctcttctcatcaattttgggacgaaaggaaccaaaatt 9387929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 85 - 246
Target Start/End: Original strand, 21185278 - 21185436
Alignment:
Q  85 aaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaatta 183  Q
    |||||||||||  ||||||||||||||||| | ||||||||| ||||||||||  ||||||| | |||||||||| ||||||  ||||||||||| ||||    
T  21185278 aaaagtgacccc-atgtttagggaaatatgttcttttgaccc-ttaacataaga-aaatatgatcttttgaccccctatcttctcaaaaagttgcgatta 21185374  T
Q  184 tggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    || ||| |||||||| ||||| |||| |||||||||||||||| |   |||||||||||||||    
T  21185375 tgaccc-ttttttggaacacgaggcggcttctcagcaattttgagccaaaaggggccaaaatt 21185436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 9554369 - 9554272
Alignment:
Q  149 ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||||||||||||||  ||||||||||| | |||||||||| ||||| ||||||||||| ||||||  ||||||||||| |||||  |||||||||    
T  9554369 ttttgaccccttatcttctcaaaaagttgcgactatggcccctgttttgagacacgtggcgccttctctacaattttgggacgaaagaagccaaaatt 9554272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 16858466 - 16858536
Alignment:
Q  149 ttttgaccccttatctttacaaaaa-gttgcaattatggccccttttttgggacacgtggcgtcttctcag 218  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||| ||||||||    
T  16858466 ttttggccccttatctttacaaaaaagttgcgattatggccccttttttgggacatgtggcggcttctcag 16858536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 21148048 - 21148126
Alignment:
Q  84 caaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgacccctt 160  Q
    ||||||||||||  |||||||||||||||||||| |||||||||| |||||||||||||||||| | ||||||||||||    
T  21148048 caaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatgatcttttgacccctt 21148126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 21148121 - 21148180
Alignment:
Q  187 ccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||||||||||||||||||||| ||||||||| |||||||| ||||||||||| ||||    
T  21148121 ccccttttttgggacacgtggcgttttctcagcagttttgggacgaaaggggccataatt 21148180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 18106891 - 18106817
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttacaaaaag-ttgcaattatggccccttttttgggacacgtggc 208  Q
    ||||||||||||| |||||| ||||||||||| ||||||  |||| |||||||||||||||||||||||||||||    
T  18106891 agggaaatatgctcttttgatcccttatctttgcaaaaaaattgcgattatggccccttttttgggacacgtggc 18106817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 83 - 226
Target Start/End: Original strand, 28750346 - 28750490
Alignment:
Q  83 gcaaaagtgacccat-atgtttagggaaatatgcttttttgaccccttaacataa-gggaaatatgctttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||| | ||||||||  ||||||||| |||||||||  |||||||| |||||| ||| |||||| || ||||||||||  ||||||||| |    
T  28750346 gcaaaagtgacccctcatgtttagaaaaatatgctcttttgaccctctaacataaggggaaaaatgttttttggcctcttatcttta-taaaagttgcga 28750444  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttg 226  Q
    |||| | || |||||||| |||||||  | ||| ||||||||||||    
T  28750445 ttatagaccattttttggaacacgtgatgacttttcagcaattttg 28750490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 23279772 - 23279691
Alignment:
Q  140 aaatatgct-ttttgaccccttatctttacaaaa-agttgcaattatgg-ccccttttttgggacacgtggcgtcttctcag 218  Q
    ||||||||| ||||| ||| |||||||||||||| |||||||||||||| |||||| ||||||| |||||||| ||||||||    
T  23279772 aaatatgctcttttgcccctttatctttacaaaatagttgcaattatggcccccttgtttgggatacgtggcggcttctcag 23279691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 10684861 - 10684965
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgacccct-taacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgca 179  Q
    ||||||||||||||   ||||||||||||||| || | ||||||||  |||||||||  ||||||| | |||||||||||||||||  |||||||||||     
T  10684861 ggcaaaagtgaccccattgtttagggaaatatactctattgacccccctaacataagaaaaatatgatcttttgaccccttatcttctcaaaaagttgcg 10684960  T
Q  180 attat 184  Q
    |||||    
T  10684961 attat 10684965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 28552499 - 28552412
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatgg--ccccttttttgggacacgtggcgtcttctcagca 220  Q
    ||||||||| ||| ||||||||| | |||||||||||||||||||||| |||  ||||| ||||| |||||||||| |||||| ||||    
T  28552499 agggaaataagctcttttgacccttaatctttacaaaaagttgcaattttggcccccctattttgagacacgtggcatcttctaagca 28552412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 48471874 - 48471921
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  48471874 acttttcgtcccctatgtttcaaaatgttgcgattttggccccctatt 48471921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 6285334 - 6285266
Alignment:
Q  159 ttatctttacaaaaagttgcaattatggcccctt-ttttgggacacgtggcgtcttctcagcaattttg 226  Q
    |||||||||||||||||||||||| || |||||| ||| | |||| |||||||||||||| ||| ||||    
T  6285334 ttatctttacaaaaagttgcaattttgaccccttatttcgagacatgtggcgtcttctcaacaactttg 6285266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 36486363 - 36486315
Alignment:
Q  149 ttttgaccccttatctttacaaaaagttgcaattatggccccttttttg 197  Q
    ||||||||| |||||||||||||||||||||||| || ||||| |||||    
T  36486363 ttttgaccctttatctttacaaaaagttgcaattttgacccctgttttg 36486315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 4059533 - 4059580
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||||| |||||| |||||||||||||||| ||||| |||||||||    
T  4059533 acttttcgccccctatgtttcaaaatgttgcgattttggccccctatt 4059580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 28552316 - 28552363
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||||| ||||||||||||||||||||||| |||||  ||||||||    
T  28552316 acttttcgccccctaagtttcaaaatgttgcgattttggtcccctatt 28552363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 14601776 - 14601738
Alignment:
Q  34 cccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  14601776 cccctaagttttaaaatgttgcgattttgaccccctatt 14601738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 24750024 - 24750074
Alignment:
Q  267 ccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    ||||||| |||  ||||||||||||||||| ||| ||||||||||||||||    
T  24750024 ccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcct 24750074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 24962253 - 24962199
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    ||||| ||||||||| |||||| |||||||||||||||  ||||| |||||||||    
T  24962253 aaactgtacttttcgccccctatgtttcaaaatgttgcagttttggccccctatt 24962199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 50334722 - 50334776
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||| |||||||| ||||||||||| ||||||||||  ||||| |||||||||    
T  50334722 aaactccacttttcgccccctaagttttaaaatgttgcaattttggccccctatt 50334776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 28552363 - 28552307
Alignment:
Q  258 aataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttag 314  Q
    ||||||||||||||||||||  ||||| |||| |||||| ||| ||||||| |||||    
T  28552363 aataggggaccaaaatcgcaacattttgaaacttagggggcgaaaagtgcactttag 28552307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 28920897 - 28920957
Alignment:
Q  258 aataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    |||||||| |||||||||||  ||||| |||| |||||| ||| ||||| |||||||||||    
T  28920897 aatagggggccaaaatcgcaacattttgaaacttagggggcgaaaagtgaagtttagccta 28920957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 153; Significance: 5e-81; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 25 - 316
Target Start/End: Complemental strand, 3253 - 2961
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacc-catatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||  |||||||||||||||         ||||||||||||| | |||||||||||||||||||| ||||||    
T  3253 acttttcgccctctaagtttcaaaatgttgcaattttgaccccctattaaaaaaaatggcaaaagtgacctcctatgtttagggaaatatgctcttttga 3154  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  3153 cctcctaacataagggaaatatgttttttgacctcttatctttacaaaaagttgcaattatggcctcttttttgggacacgtggcgtcttctcatcaatt 3054  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    |||||||||| |||||||||||| |||       |||||||| |||||||||||  ||||| ||||||||||| ||| ||||||| |||||||    
T  3053 ttgggatgaagggggccaaaattgccatttttttaatagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 2961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 2972 - 3019
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||||| |||||| |||||||||||||||| ||||| |||||||||    
T  2972 acttttcgccccctatgtttcaaaatgttgcgattttggccccctatt 3019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 2e-80; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 82 - 318
Target Start/End: Complemental strand, 13826654 - 13826418
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaat 181  Q
    |||||||||||||| ||||||| |||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13826654 ggcaaaagtgacccctatgtttcgggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 13826555  T
Q  182 tatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataat 281  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||       ||||||||  ||||||||||  ||    
T  13826554 tatagccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaattgccatttttttaatagggggtcaaaatcgcaacat 13826455  T
Q  282 tttaaaacataggggacgagaagtgcagtttagccta 318  Q
    ||| ||||||||||| ||| ||||||| |||||||||    
T  13826454 ttttaaacatagggggcgaaaagtgcactttagccta 13826418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 27018219 - 27018516
Alignment:
Q  16 caaaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgc 115  Q
    |||||||| |||||||| | ||||| ||| ||||||||||| ||||||||||||| |         ||||||||||||||||||||||||||||||||||    
T  27018219 caaaactcaacttttcgcctcctaaattttaaaatgttgcgattttgaccccctaataaaaaat--ggcaaaagtgacccatatgtttagggaaatatgc 27018316  T
Q  116 ttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttct 215  Q
    | |||||||||| ||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27018317 tcttttgaccccctaacaaaagggaaatatgttttttgaccccttatccttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttct 27018416  T
Q  216 cagcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacata-ggggacgagaagtgcagttta 313  Q
    ||||||||||||||||||| ||||||||||| |||        ||||||||  ||||||||||  ||||| ||||||| |||| ||||||||||||||||    
T  27018417 cagcaattttgggatgaaatgggccaaaattgccattttttttaatagggggtcaaaatcgcaacattttgaaacataggggggcgagaagtgcagttta 27018516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 25 - 316
Target Start/End: Complemental strand, 13397968 - 13397675
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||| ||||  ||||| |||||||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  13397968 acttttcgccctctaagtttcaaaatattgcaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttga 13397869  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13397868 cctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatt 13397769  T
Q  224 ttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    || ||||||| |||||||||||| | |        |||||||| | |||||||||  ||||||||||||||||| ||| ||||||| |||||||    
T  13397768 ttcggatgaagggggccaaaattgctattttttttaatagggggctaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagcc 13397675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 27 - 316
Target Start/End: Original strand, 35475304 - 35475592
Alignment:
Q  27 ttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgaccc 126  Q
    |||||| || |||||||| ||||||||||| ||||| | |||||||         |||||||||||||| |||||||||||||||||||| ||||||||     
T  35475304 ttttcgccctctaagttttaaaatgttgcgattttggctccctattaaaaaaaatggcaaaagtgaccc-tatgtttagggaaatatgctcttttgacct 35475402  T
Q  127 cttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttg 226  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||     
T  35475403 cctaacataagggaaatatgttttttgaccccttatctttacaaaaagtagcgattatgaccccttttttgggacacgtggcgtcttctcagcaatttta 35475502  T
Q  227 ggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    |||||||| |||||||||||  ||       | || |||||||||||||||  ||||||||||||||||||| | |||||||||||||||    
T  35475503 ggatgaaatgggccaaaattgtcatttttttattaagggaccaaaatcgcaacattttaaaacataggggacaaaaagtgcagtttagcc 35475592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 18 - 318
Target Start/End: Complemental strand, 43793930 - 43793629
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccc-atatgtttagggaaatatgct 116  Q
    |||||| |||||| | | ||||||||||||||||||||| ||||| |||||||||         |||||||||||||| |||||||||||||||||||||    
T  43793930 aaactccactttttgccgcctaagtttcaaaatgttgcgattttggccccctattaaaaaaat-ggcaaaagtgaccccatatgtttagggaaatatgct 43793832  T
Q  117 tttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
     |||||||| | |||||||||||||||||| ||||||||||||||| ||||||||||||||| | |||| |||||||||||||||| |||||||||||||    
T  43793831 cttttgacctcctaacataagggaaatatgttttttgaccccttatatttacaaaaagttgcgaatatgaccccttttttgggacatgtggcgtcttctc 43793732  T
Q  217 agcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagc 315  Q
    ||||||||||||| |||| ||||||||||| |||        |||||||| |||||||||||  ||||||||||||||||| ||| ||||||||||||||    
T  43793731 agcaattttgggacgaaatgggccaaaattgccattttttttaatagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcagtttagc 43793632  T
Q  316 cta 318  Q
    |||    
T  43793631 cta 43793629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 18 - 317
Target Start/End: Original strand, 25011739 - 25012039
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgct 116  Q
    |||||| |||||||||||||||||||||||||||||||| ||||| |||||||||         ||||||||||||||  ||||||||||||||||||||    
T  25011739 aaactccacttttcgtcccctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgct 25011838  T
Q  117 tttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
     |||||||||| |||||||||||  ||||| ||||||||||||||||||||||||||||||  ||||||  ||||||||||||||||||||| ||||||     
T  25011839 cttttgaccccctaacataagggggatatgttttttgaccccttatctttacaaaaagttgggattatgatcccttttttgggacacgtggcatcttctg 25011938  T
Q  217 agcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    ||||||||||| |||||||||||||||||| | |       |||||||| ||||||| |||  ||| | ||||||||||| ||| |||||||||||||||    
T  25011939 agcaattttggaatgaaaggggccaaaattgctatttttttaatagggggccaaaattgcaacattatgaaacatagggggcgaaaagtgcagtttagcc 25012038  T
Q  317 t 317  Q
    |    
T  25012039 t 25012039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 15059054 - 15058819
Alignment:
Q  82 ggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||||  |||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15059054 ggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcga 15058955  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataa 280  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||       |||||||| |||||||||||  |    
T  15058954 ttatagccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaagttgccatatttttaatagggg-ccaaaatcgcaaca 15058856  T
Q  281 ttttaaaacataggggacgagaagtgcagtttagcct 317  Q
    |||| ||||||||||| | | ||||||| ||||||||    
T  15058855 ttttgaaacatagggggccaaaagtgcactttagcct 15058819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 5304638 - 5304418
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    |||||||| || |||||||||||||||||||| ||||||||| |||||         |||||||||||||| |||||||||||||||||||| |||||||    
T  5304638 acttttcgccctctaagtttcaaaatgttgcgattttgaccctctattaaaaaaat-ggcaaaagtgacccctatgtttagggaaatatgctcttttgac 5304540  T
Q  125 cccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattt 224  Q
    | | |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  5304539 ctcctaacataaggaaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccattttttgggacacgtggcgtcttctcagcaattt 5304440  T
Q  225 tgggatgaaaggggccaaaatt 246  Q
    || |||||| ||||||||||||    
T  5304439 tgcgatgaagggggccaaaatt 5304418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 25 - 313
Target Start/End: Original strand, 4357263 - 4357552
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgac-ccatatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||| ||||  | |||||||         |||||||||||| || ||| |||||||||||||||| ||||||    
T  4357263 acttttcgccctctaagtttcaaaatgttgcgattttagctccctattaaaaaaaatggcaaaagtgacaccctatatttagggaaatatgctcttttga 4357362  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    ||   |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||    
T  4357363 ccttctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccctttttttgggacacctggcgtcttctcagcaatt 4357462  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagttta 313  Q
    || | ||||| |||||||||||| |||       ||||||||  ||||||||||  ||||| ||| ||||||| ||| ||||||| ||||    
T  4357463 ttagaatgaagggggccaaaattgccatttttttaatagggggtcaaaatcgcaacattttgaaatatagggggcgaaaagtgcacttta 4357552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 19232644 - 19232414
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtga-cccatatgtttagggaaatatgct 116  Q
    |||||| |||||| | ||||||||||||||||||||| | |||||  | ||||||         ||||||||||| ||||||||||||||||||||||||    
T  19232644 aaactccactttttgccccctaagtttcaaaatgttgtgattttggtcacctattaaaaaaaatggcaaaagtgatcccatatgtttagggaaatatgct 19232545  T
Q  117 tttttgaccccttaacataagggaaatatgctttttg-accccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttct 215  Q
     ||||||| || |||||||||| ||||||| |||||  ||||||||||||||||||||||||| |||||| |||||||| ||||||||||||| ||||||    
T  19232544 cttttgactccctaacataaggaaaatatgttttttttaccccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttct 19232445  T
Q  216 cagcaattttgggatgaaaggggccaaaatt 246  Q
     ||||||||||||||||||||||||||||||    
T  19232444 gagcaattttgggatgaaaggggccaaaatt 19232414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 41877317 - 41877099
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||| ||||| | |||||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  41877317 acttttcgccctctaagtttcaaaatgttgcgattttggctccctattaaaaaat--ggcaaaagtgaccccctatgtttagggaaatatgctcttttga 41877220  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | ||||||||||||||||||||||||||||||||||||||||  |||||||| |||||| |||||||||| |||||||||||||||| |||||||||    
T  41877219 cctcctaacataagggaaatatgctttttgaccccttatctttac--aaagttgcgattatgaccccttttttaggacacgtggcgtcttttcagcaatt 41877122  T
Q  224 ttgggatgaaaggggccaaaatt 246  Q
    ||  |||||||||||||||||||    
T  41877121 ttttgatgaaaggggccaaaatt 41877099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 39 - 314
Target Start/End: Original strand, 41034661 - 41034936
Alignment:
Q  39 aagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacataag 137  Q
    |||||||||||||||||  |||||||||| ||||         ||||||||||||||  |||| | ||||||||||| | |||||||| | |||||||||    
T  41034661 aagtttcaaaatgttgcaattttgaccccttattaaaaaaaatggcaaaagtgaccccctatgctcagggaaatatgatcttttgacctcctaacataag 41034760  T
Q  138 ggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggg 237  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||| | ||||||||||| ||||||||||||||||| | ||||||  ||||||||||    
T  41034761 ggaaatatgctttttgaccccttatttttacaaaaagttgcgattatagtcccttttttggaacacgtggcgtcttctcggtaatttt--gatgaaaggg 41034858  T
Q  238 gccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttag 314  Q
    ||||||||| | |        |||||||||||||||| |||  ||||||||| ||||||||||| |||| ||||||||    
T  41034859 gccaaaattgctattttttttaataggggaccaaaattgcaacattttaaaatataggggacgaaaagtacagtttag 41034936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 84 - 316
Target Start/End: Original strand, 4098726 - 4098960
Alignment:
Q  84 caaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaat 181  Q
    ||||||||||||  ||||||| |||||||||||| |||||||||| |||||||||||||||||| | |||||||||||||||||  ||||||||||||||    
T  4098726 caaaagtgaccccctatgttttgggaaatatgctcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcaat 4098825  T
Q  182 tatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataat 281  Q
    || ||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||| ||||   |       ||||| || |||||||||||  ||    
T  4098826 taaggccccttttttgggacacgtggcgtcttctcgtcaattttgggacgaaaggggccataattataaattttttaatagagggccaaaatcgcaacat 4098925  T
Q  282 tttaaaacataggggacgagaagtgcagtttagcc 316  Q
    |||||||| ||| || | | |||||||||||||||    
T  4098926 tttaaaacttagaggtcaaaaagtgcagtttagcc 4098960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 18 - 317
Target Start/End: Complemental strand, 1588712 - 1588414
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacc-catatgtttagggaaatatgct 116  Q
    |||||| |||||||||||| ||||||| ||||||||||| ||||  || | ||||         || |||||||||| | ||||||||||||||||||||    
T  1588712 aaactccacttttcgtcccttaagttttaaaatgttgcgattttcgcctcatatttaaaaaaatggaaaaagtgacctcctatgtttagggaaatatgct 1588613  T
Q  117 tttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
     ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| | ||||||||||||||| ||||||||     
T  1588612 cttttgacccct-aacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatagcctc-tttttgggacacgtgacgtcttctt 1588515  T
Q  217 agcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    |||| |||||| | |||| ||||||||||| |||       |||| |||  ||||||||||  |||||||||||||  |||||| || |||| |||||||    
T  1588514 agcagttttggaaagaaaagggccaaaattgccatttttttaataagggggcaaaatcgcaatattttaaaacataaaggacgaaaaatgcaatttagcc 1588415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 6789251 - 6789029
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| ||  ||||||||||||||||||| ||||| |||||| ||         ||||||||||||||  |||||||||||||||||||| ||| ||    
T  6789251 acttttcgccctttaagtttcaaaatgttgcgattttggccccctgttaaataaaatggcaaaagtgaccccctatgtttagggaaatatgctgtttcga 6789152  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||| || |||| ||| |||||||||| ||||||||||||||| |||| |||||| ||| ||||||||||||||||||||||||| |||||||    
T  6789151 cctcctaacatgagagaaaaatgttttttgacccgttatctttacaaaaaattgcgattatgcccctttttttgggacacgtggcgtcttcttagcaatt 6789052  T
Q  224 ttgggatgaaaggggccaaaatt 246  Q
    |||||||||| ||||||||||||    
T  6789051 ttgggatgaagggggccaaaatt 6789029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 85 - 318
Target Start/End: Original strand, 2931392 - 2931625
Alignment:
Q  85 aaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaatta 183  Q
    |||||||||||  |||||||||||||||||||| |||||||| | |||||||| |||||||||||||||||||||||||||||||||||| |||| |||     
T  2931392 aaaagtgaccccctatgtttagggaaatatgctcttttgacctcataacataaaggaaatatgctttttgaccccttatctttacaaaaaattgcgattg 2931491  T
Q  184 tggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattt 283  Q
    ||||||| ||||| |||| ||||||||||||||||  ||||| |||||||||||||||||||| | |       |||||| |   |||||  ||  ||||    
T  2931492 tggccccgttttttggac-cgtggcgtcttctcagacatttttggatgaaaggggccaaaattactattttcttaataggaggttaaaattacaacattt 2931590  T
Q  284 taaaacataggggacgagaagtgcagtttagccta 318  Q
    ||||||||||||| ||| |||||||||||||||||    
T  2931591 taaaacatagggggcgaaaagtgcagtttagccta 2931625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 4433474 - 4433266
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| ||||||||||| ||||||||||| ||||| |||| ||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  4433474 acttttcg-cccctaagttttaaaatgttgcgattttggcccc-tattaaaaaaaaaggcaaaagtgaccccctatgtttagggaaatatgctcttttga 4433377  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    |||| |||||||||| ||||||| ||||||||||||||||||||||||||||||  |||||| |||||||| | ||||||||||| |||| | |||||||    
T  4433376 ccccctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgtgattatgaccccttttctaggacacgtggcatcttatgagcaatt 4433277  T
Q  224 ttgggatgaaa 234  Q
    |||||||||||    
T  4433276 ttgggatgaaa 4433266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 103 - 227
Target Start/End: Complemental strand, 2715930 - 2715807
Alignment:
Q  103 tagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggaca 202  Q
    |||||||||||| | ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  2715930 tagggaaatatgatcttttgacccct-aacatatgggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccattttttgggaca 2715832  T
Q  203 cgtggcgtcttctcagcaattttgg 227  Q
    ||||||||||||||| | |||||||    
T  2715831 cgtggcgtcttctcatccattttgg 2715807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 98 - 246
Target Start/End: Complemental strand, 51291389 - 51291240
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||||||||||||| | |||||||||| |||||||||||||||||| | |||||||||||||||||  ||||||||||  |||||||||||||||||    
T  51291389 atgtttagggaaatatgttcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgtgattatggcccctttttt 51291290  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||| |||||||||||||| |||||||| || |||| |||| ||||||    
T  51291289 gggacatgtggcgtcttctcaccaattttgtgacgaaatgggcaaaaatt 51291240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 45633449 - 45633669
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgac-ccatatgtttagggaaatatgcttttttga 123  Q
    |||||||| ||||||||||||||||| ||||| |||||||||| ||||         |||||||||||| || |||||||||||||||||||| | ||||    
T  45633449 acttttcgccccctaagtttcaaaatattgcgattttgacccc-tattaaaaaaaatggcaaaagtgactccctatgtttagggaaatatgctctattga 45633547  T
Q  124 ccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaat 222  Q
    || | |||||||||| ||||||||| ||||||||||||||||||  |||||||||  |||||| ||| |||||| ||||||||||||| |||||| ||||    
T  45633548 ccgcctaacataagg-aaatatgctcttttgaccccttatcttttaaaaaagttgtgattatgaccctttttttaggacacgtggcgt-ttctcaacaat 45633645  T
Q  223 tttgggatgaaaggggccaaaatt 246  Q
    |||||||  |||||||||||||||    
T  45633646 tttgggacaaaaggggccaaaatt 45633669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 97 - 246
Target Start/End: Original strand, 52838313 - 52838462
Alignment:
Q  97 tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    |||||||||| ||||||||| |||||||| | ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  52838313 tatgtttagg-aaatatgctcttttgacctcctaacatacgggaaatatgctttttgaccc-ttatctttacaaaaagttgcgattatggtccctttttt 52838410  T
Q  197 gggacacgtggcgtcttctcagca--attttgggatgaaaggggccaaaatt 246  Q
    | |||||||| |||||||||||||  |||||  |||||||||||||||||||    
T  52838411 gagacacgtgtcgtcttctcagcaatattttttgatgaaaggggccaaaatt 52838462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 9195955 - 9195734
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| ||||||| ||||||||||||||| |||||  ||||||||         | ||||||||||||  |||||||||||||||||||| ||||||    
T  9195955 acttttcgccccctaaatttcaaaatgttgcgattttggtcccctattaaaaaaat-gacaaaagtgaccccctatgtttagggaaatatgctcttttga 9195857  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtc-ttctcagcaat 222  Q
    ||| | ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| | | |||||||||  | || | ||||||    
T  9195856 cccat-aacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctagaacacgtggcacctttttgagcaat 9195758  T
Q  223 tttgggatgaaaggggccaaaatt 246  Q
    | ||||||||||||||| ||||||    
T  9195757 tatgggatgaaaggggcaaaaatt 9195734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 27 - 213
Target Start/End: Original strand, 55780400 - 55780586
Alignment:
Q  27 ttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgacc 125  Q
    |||||| ||| |||||||  |||||||||| ||||| |||||||||         ||||||||||||||  |||||||||||||||||||| ||||||||    
T  55780400 ttttcgccccttaagttttcaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttgacc 55780499  T
Q  126 ccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtctt 213  Q
    ||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| | ||||||||||| ||||    
T  55780500 cct-aacctaaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctaggacacgtggcatctt 55780586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 27 - 213
Target Start/End: Original strand, 55844580 - 55844766
Alignment:
Q  27 ttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgacc 125  Q
    |||||| ||| |||||||  |||||||||| ||||| |||||||||         ||||||||||||||  |||||||||||||||||||| ||||||||    
T  55844580 ttttcgccccttaagttttcaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttgacc 55844679  T
Q  126 ccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtctt 213  Q
    ||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| | ||||||||||| ||||    
T  55844680 cct-aacctaaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctaggacacgtggcatctt 55844766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 84 - 246
Target Start/End: Complemental strand, 6209475 - 6209310
Alignment:
Q  84 caaaagtgaccc-atatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttt-tgaccccttatctttacaaaaagttgcaat 181  Q
    |||||||||||| | |||||||||||| ||||| |||||||||||| ||||||||||||| ||| | || ||||||||||||||  |||||||||||||     
T  6209475 caaaagtgaccccacatgtttagggaattatgcatttttgacccct-aacataagggaaaaatgatcttatgaccccttatcttctcaaaaagttgcaac 6209377  T
Q  182 tatggcccc--ttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||||||| |  ||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  6209376 tatggccacctttttttgggacacgtggtgtcttctcagcaattttggaacgaaaggggccaaaatt 6209310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 25618809 - 25618699
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaa 234  Q
    ||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  25618809 agggaaatatgctcttttgaccccttatctttacaaaaagtggcgattatggccccttttt-gggacacgtggcgtcttctcagcaatttttggatgaaa 25618711  T
Q  235 ggggccaaaatt 246  Q
    ||| ||||||||    
T  25618710 gggaccaaaatt 25618699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 84 - 247
Target Start/End: Original strand, 15734469 - 15734631
Alignment:
Q  84 caaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacataaggg-aaatatgctttttgaccccttatctttacaaaaagttgcaat 181  Q
    ||||||||||||  |||||||||||||||||| | |||||||||  ||||||||||| |||||||| ||||||||| | || ||||||||||||||  ||    
T  15734469 caaaagtgaccctctatgtttagggaaatatgttcttttgaccc--taacataaggggaaatatgccttttgacccgtcatgtttacaaaaagttgtgat 15734566  T
Q  182 tatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaattt 247  Q
     ||||||||||||||||||||||   |||||||||||||||||||| | |||| ||||||||||||    
T  15734567 aatggccccttttttgggacacgcaacgtcttctcagcaattttggaacgaaa-gggccaaaattt 15734631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 101 - 217
Target Start/End: Original strand, 23362519 - 23362635
Alignment:
Q  101 tttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttggga 200  Q
    |||||||||||||| | ||||||||| ||||||||||| |||||||||||||   | ||||||||||||||||||||| |||||| ||||||||||||||    
T  23362519 tttagggaaatatgttcttttgaccctttaacataaggaaaatatgctttttagtctcttatctttacaaaaagttgcgattatgaccccttttttggga 23362618  T
Q  201 cacgtggcgtcttctca 217  Q
    ||| | |||||||||||    
T  23362619 cacattgcgtcttctca 23362635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 98 - 316
Target Start/End: Original strand, 9397276 - 9397493
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatg-ctttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    |||| |||||||||||||| |||||||||  |||||||| |||||||||  ||||| |||| |||||||||||||||||||  ||||| | || ||||||    
T  9397276 atgtatagggaaatatgctcttttgaccctctaacataaaggaaatatgtttttttaaccctttatctttacaaaaagttgtcattat-gaccttttttt 9397374  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacatagggg 296  Q
     ||||||||| ||| |||||| |||||||||||  ||||||||| |||||| ||       |||||||| |||||||| ||  |||||||||| ||||||    
T  9397375 cggacacgtgccgtgttctcaacaattttgggactaaaggggcc-aaattttcatttttttaatagggggccaaaatcccaacattttaaaacttagggg 9397473  T
Q  297 acgagaagtgcagtttagcc 316  Q
      || |||||||||||||||    
T  9397474 gtgaaaagtgcagtttagcc 9397493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 24626452 - 24626221
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||||    ||||||||||||||||| ||||||| |  |||||||||||||||||| | ||||||| |||||||||  ||||||||||  |    
T  24626452 ggcaaaagtgaccc----gtttagggaaatatgctcttttgactcaataacataagggaaatatgatcttttgactccttatcttctcaaaaagttgtga 24626357  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataa 280  Q
    ||||| ||| | |||||||||| |||| ||||||| | ||||||||||| ||| |||||||||| |  ||       ||||||||  ||||||||||  |    
T  24626356 ttatgacccatgttttgggacatgtggtgtcttcttaacaattttgggacgaatggggccaaaaatgtcatttttttaatagggg-tcaaaatcgcaaca 24626258  T
Q  281 ttttaaaacataggggacgagaagtgcagtttagcct 317  Q
    ||||||||| ||| || ||| ||||||||||||||||    
T  24626257 ttttaaaacttagagggcgaaaagtgcagtttagcct 24626221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 108 - 245
Target Start/End: Original strand, 15795412 - 15795549
Alignment:
Q  108 aaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtgg 207  Q
    ||||||||| |||||| | | |||||||||||||||| |||||||||||  |||||||| ||||||||||  |||||| ||| |||||| ||||| ||||    
T  15795412 aaatatgctcttttgaactcctaacataagggaaataggctttttgaccttttatcttttcaaaaagttgggattatgacccattttttaggacatgtgg 15795511  T
Q  208 cgtcttctcagcaattttgggatgaaaggggccaaaat 245  Q
    |||||||||| ||||||||||| ||||| ||| |||||    
T  15795512 cgtcttctcatcaattttgggacgaaagaggctaaaat 15795549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 36729270 - 36729159
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaa 234  Q
    ||||||||||| | |||||||||||||||||  ||||||||| | |||||| ||  |||||||||||| ||||||||||||||| |||||||||||||||    
T  36729270 agggaaatatgatcttttgaccccttatcttctcaaaaagtttcgattatgaccttttttttgggacatgtggcgtcttctcagtaattttgggatgaaa 36729171  T
Q  235 ggggccaaaatt 246  Q
    ||||||||||||    
T  36729170 ggggccaaaatt 36729159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 13394668 - 13394536
Alignment:
Q  185 ggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt-tccannnnnnnaataggggaccaaaatcgcataattt 283  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||         |||||||| | |||||||||  ||||    
T  13394668 ggccccttttttgggacacgtggcgtcttctcagcaattttcggatgaagggggccaaaattgtcattttttttaatagggggctaaaatcgcaacattt 13394569  T
Q  284 taaaacataggggacgagaagtgcagtttagcc 316  Q
    ||||||||||||| ||| ||||||| |||||||    
T  13394568 taaaacatagggggcgaaaagtgcactttagcc 13394536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 319
Target Start/End: Complemental strand, 20919564 - 20919332
Alignment:
Q  84 caaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttg-accccttatctttacaaaaagttgcaatt 182  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||  ||| ||| || ||||||| | || | ||||||||||||  ||||| ||||  |||    
T  20919564 caaaagtgatcca-atgtttagggaaatatgctcttttgaccctataa-ata-ggaaaatatgatcttaggaccccttatcttctcaaaa-gttgtgatt 20919469  T
Q  183 atggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataatt 282  Q
    |||  |||| |||||||||| ||| |||||||||||||||||||||| ||||   |||||||||   |       ||||| | ||||||||||||  |||    
T  20919468 atgatccctcttttgggacatgtgacgtcttctcagcaattttgggacgaaactagccaaaattgtaatttttttaatagagaaccaaaatcgcaacatt 20919369  T
Q  283 ttaaaacataggggacgagaagtgcagtttagcctat 319  Q
    || |||| |||||| ||| ||||||||||||||||||    
T  20919368 ttgaaacttaggggtcgaaaagtgcagtttagcctat 20919332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 317
Target Start/End: Original strand, 47869811 - 47869958
Alignment:
Q  169 aaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggacc 268  Q
    |||||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||||||||| | ||||| |||| |||       |||||||| ||    
T  47869811 aaaaagttgcgattatgaccc-ttttttggaacacgtggcgtcttctcagcaattttgggatgaaggaggccagaattgccatttttttaatagggggcc 47869909  T
Q  269 aaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    |||||| ||  ||||| ||| ||||||| | | || |||| ||||||||    
T  47869910 aaaatcacaacattttgaaatatagggggcaaaaattgcactttagcct 47869958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 33978856 - 33978936
Alignment:
Q  139 gaaatatgc-tttttgaccccttatctttacaaaaa-gttgcaattatggccccttttttgggacacgtggcgtcttctca 217  Q
    ||||||||| |||||| || |||||||||||||||| ||||| |||||| ||||||||||||||||||||||  |||||||    
T  33978856 gaaatatgcatttttggcctcttatctttacaaaaaagttgcgattatgaccccttttttgggacacgtggcagcttctca 33978936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 12101284 - 12101217
Alignment:
Q  159 ttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttg 226  Q
    |||||||||||||||||||||||| || | ||| ||||| |||| ||||||||||||||||| |||||    
T  12101284 ttatctttacaaaaagttgcaattttgactcctgttttgagacatgtggcgtcttctcagcagttttg 12101217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 246
Target Start/End: Original strand, 14804441 - 14804552
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaa 234  Q
    |||||||||| || ||||||||||||||||||| ||||| |||  ||||||    |||||||| ||||| |||||| |||||| |||||||| || ||||    
T  14804441 agggaaatatactcttttgaccccttatctttagaaaaacttgtgattatgatatcttttttgagacacatggcgttttctcaacaattttgagacgaaa 14804540  T
Q  235 ggggccaaaatt 246  Q
    | ||||||||||    
T  14804541 gaggccaaaatt 14804552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 25618877 - 25618783
Alignment:
Q  37 ctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgacccctta 130  Q
    |||||||||||||||||||  |||||||||||||||         ||||||||||||||  || ||||||||||||||||| |||||||||||||    
T  25618877 ctaagtttcaaaatgttgcaattttgaccccctattaagaaaaatggcaaaagtgaccccctaagtttagggaaatatgctcttttgacccctta 25618783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 14612320 - 14612234
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttac-aaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagca 220  Q
    ||||||||||||| ||||| |||||||||||||| |||||||| | ||| ||||||| ||||| |||||||||||| ||||| ||||    
T  14612320 agggaaatatgctcttttggccccttatctttaccaaaaagttacgattttggccccctttttaggacacgtggcggcttcttagca 14612234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 14784741 - 14784668
Alignment:
Q  136 agggaaatatgcttttt-gaccccttatctttaca-aaaagttgcaattatggccccttttttgggacacgtggc 208  Q
    ||||||||||| ||||| ||||||||||||||||| |||| |||||||| ||| |||||||||||||||||||||    
T  14784741 agggaaatatgtttttttgaccccttatctttacaaaaaatttgcaattttgg-cccttttttgggacacgtggc 14784668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 14857467 - 14857536
Alignment:
Q  149 ttttgaccccttatctttacaaaaagttgcaa-ttatggccccttttttgggacacgtggcgtcttctca 217  Q
    ||||||||| |||||||||||||||||| ||| || || ||||| ||||||||||| |||||||||||||    
T  14857467 ttttgaccctttatctttacaaaaagtttcaatttttgccccctattttgggacacatggcgtcttctca 14857536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 16291898 - 16291777
Alignment:
Q  101 tttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctt-ttttgg 198  Q
    |||||||||||||||| ||||  |||  || | | ||||||||| | | ||||| |||||||||||||||||||||||  |||  |||||| | ||||||    
T  16291898 tttagggaaatatgctcttttagccctctatctttagggaaataagatcttttgtccccttatctttacaaaaagttgtgatttaggccccctgttttgg 16291799  T
Q  199 gacacgtggcgtcttctcagca 220  Q
    | ||||||||||||||||||||    
T  16291798 gtcacgtggcgtcttctcagca 16291777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 7540272 - 7540189
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttaca-aaaagttgcaattatggccccttttttgggacacgtggcgtcttctca 217  Q
    ||||||||||||| ||||||||| |||||||| || |||| || | |||||| ||||||||||||||||||||||  |||||||    
T  7540272 agggaaatatgctcttttgaccctttatctttgcataaaaattccgattatgaccccttttttgggacacgtggcagcttctca 7540189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 48158681 - 48158731
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct 148  Q
    ||||||||||||||||| | |||||||||  ||||||||||||||||||||    
T  48158681 atgtttagggaaatatgatcttttgaccctctaacataagggaaatatgct 48158731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 40259745 - 40259673
Alignment:
Q  139 gaaatatgc-tttttgaccccttatctttaca-aaaagttgcaattatggccccttttttgggacacgtggcg 209  Q
    ||||||||| |||||| ||||||||||||||| ||||||||   ||||| || ||||||||||||||||||||    
T  40259745 gaaatatgcatttttgcccccttatctttacaaaaaagttgtgcttatgacctcttttttgggacacgtggcg 40259673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 4357544 - 4357497
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||||| ||||||  ||||||||||||||| |||||||||||||||    
T  4357544 acttttcgccccctatatttcaaaatgttgcgattttgaccccctatt 4357497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 13826431 - 13826478
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||||| |||||| |||| ||||||||||| |||||||||||||||    
T  13826431 acttttcgccccctatgtttaaaaatgttgcgattttgaccccctatt 13826478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 25011793 - 25011735
Alignment:
Q  258 aataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    |||||||| |||||||||||  ||||| |||| |||||||||| ||||| |||||||||    
T  25011793 aatagggggccaaaatcgcaacattttgaaacttaggggacgaaaagtggagtttagcc 25011735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 27018498 - 27018460
Alignment:
Q  34 cccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  27018498 cccctatgtttcaaaatgttgcgattttgaccccctatt 27018460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 33621152 - 33621110
Alignment:
Q  204 gtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||||||||||| ||||||||| |||||| |||||||||||    
T  33621152 gtggcgtcttctcatcaattttggaatgaaacgggccaaaatt 33621110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 36729109 - 36729147
Alignment:
Q  34 cccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  36729109 cccctaagtttcaaaatgttgtgattttgaccccctatt 36729147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 36729290 - 36729244
Alignment:
Q  84 caaaagtgacccatatgtttagggaaatatgcttttttgacccctta 130  Q
    ||||||||||||  ||||||||||||||||| | |||||||||||||    
T  36729290 caaaagtgaccctcatgtttagggaaatatgatcttttgacccctta 36729244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 47645542 - 47645624
Alignment:
Q  140 aaatatgct-ttttgaccccttatcttta-caaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagca 220  Q
    ||||||||| ||||| ||||||||||||| ||||||||| ||||| ||| | ||||||| ||| |||||||| ||||| ||||    
T  47645542 aaatatgctcttttggccccttatctttaccaaaaagttacaattttggtctcttttttaggatacgtggcggcttcttagca 47645624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 5932028 - 5931971
Alignment:
Q  150 tttgaccccttatctttacaaaaagttgcaattatggcccctt-ttttgggacacgtg 206  Q
    |||| |||| |||||||||||||||||  |||||||||||||| |||| |||||||||    
T  5932028 tttggccccctatctttacaaaaagttataattatggccccttgttttaggacacgtg 5931971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 14784748 - 14784715
Alignment:
Q  97 tatgtttagggaaatatgcttttttgacccctta 130  Q
    |||||||||||||||||| |||||||||||||||    
T  14784748 tatgtttagggaaatatgtttttttgacccctta 14784715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 20919346 - 20919383
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttg 62  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  20919346 acttttcgacccctaagtttcaaaatgttgcgattttg 20919383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 217
Target Start/End: Complemental strand, 43336156 - 43336039
Alignment:
Q  101 tttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggc-cccttttttggg 199  Q
    |||||||||||||| | ||||||||   || | | | ||||||| | | |||||||| |||||||||||||||||||| |||  ||| |||| |||   |    
T  43336156 tttagggaaatatgttcttttgaccttctatctttatggaaataagatgtttgaccctttatctttacaaaaagttgcgatttcggctccctgtttcaag 43336057  T
Q  200 acacgtggcgtcttctca 217  Q
    ||||||||||||||||||    
T  43336056 acacgtggcgtcttctca 43336039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 4433241 - 4433181
Alignment:
Q  258 aataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    |||| ||| |||||||||||  ||| | ||||||||||| ||| |||||||||||||||||    
T  4433241 aataaggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcagtttagccta 4433181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 22057421 - 22057365
Alignment:
Q  155 ccccttatctttacaaaaagttgcaattatggcccctt-ttttgggacacgtggcgt 210  Q
    |||||||||||||||||| ||||| |||  |||||| | ||||||||||||||||||    
T  22057421 ccccttatctttacaaaatgttgcgattccggccccctgttttgggacacgtggcgt 22057365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 151; Significance: 8e-80; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 18 - 318
Target Start/End: Complemental strand, 8802699 - 8802398
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgct 116  Q
    ||||| ||||||||| || |||||||||||||||||||| ||||| |||||||||         ||||||||||||||  ||||||||||||||||||||    
T  8802699 aaactttacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccctctatgtttagggaaatatgct 8802600  T
Q  117 tttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
     |||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||    
T  8802599 cttttgacctcctaacataagggaaata-gctttttgaccccttatctttacaaaaagttgcgattatggccccttttttggaacatgtggcgtcttctc 8802501  T
Q  217 agcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagc 315  Q
    ||||||||||||||||| |||||||||||| |||        |||||||| |||||||||||  ||||||||||||| ||||||| ||||||| ||||||    
T  8802500 agcaattttgggatgaagggggccaaaattgccattttttttaatagggggccaaaatcgcaacattttaaaacatacgggacgaaaagtgcactttagc 8802401  T
Q  316 cta 318  Q
    |||    
T  8802400 cta 8802398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 25 - 318
Target Start/End: Complemental strand, 4519160 - 4518867
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    ||||||||||| |||||||||||||||||||| ||||| | |||||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  4519160 acttttcgtcctctaagtttcaaaatgttgcgattttggctccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttga 4519061  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
     | | |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  4519060 tctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcaacaatt 4518961  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    ||| |||| |||||||||||||| |||       |||||||| |||||||||||  ||||||||| ||||||| ||| ||||||| |||||||||    
T  4518960 ttgagatg-aaggggccaaaattgccatttttttaatagggggccaaaatcgcaatattttaaaatatagggggcgaaaagtgcactttagccta 4518867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 82 - 319
Target Start/End: Complemental strand, 19391623 - 19391385
Alignment:
Q  82 ggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||||  |||||||||||||||||||| |||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  19391623 ggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcga 19391524  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcata 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |        |||||||||||||||| |||      
T  19391523 ttatggccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgctattttttttaataggggaccaaaattgcaac 19391424  T
Q  280 attttaaaacataggggacgagaagtgcagtttagcctat 319  Q
    ||||| ||||||||||| ||| ||||||||||||||||||    
T  19391423 attttgaaacatagggg-cgaaaagtgcagtttagcctat 19391385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 25 - 317
Target Start/End: Complemental strand, 5192564 - 5192271
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacc-catatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||| ||||||||||| |||||  || |||||         ||||||||||||| | |||||||||||||||||||| ||||||    
T  5192564 acttttcgccctctaagttttaaaatgttgcgattttggtcctctattaaaaaaaatggcaaaagtgacctcctatgtttagggaaatatgctcttttga 5192465  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || |||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5192464 cctcttaacataagggaaatatgttttttgacctcttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcgtcttctcagcaatt 5192365  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    || |||| ||||||||||||||| | |       |||||||| ||||||| |||  ||||| ||||||||||| ||| ||||| ||||||||||    
T  5192364 tttggataaaaggggccaaaattgctatttatttaatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgaagtttagcct 5192271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 27 - 246
Target Start/End: Original strand, 38630068 - 38630288
Alignment:
Q  27 ttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgac-ccatatgtttagggaaatatgcttttttgacc 125  Q
    |||||| || |||||||||||||||||||| |||||| ||||||||         || ||||||||| || |||||||||||||||||||| ||||||||    
T  38630068 ttttcgccctctaagtttcaaaatgttgcgattttgatcccctattaaaaaaaatggtaaaagtgactccctatgtttagggaaatatgctcttttgacc 38630167  T
Q  126 ccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatttt 225  Q
     | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  38630168 tcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcagcaatttt 38630267  T
Q  226 gggatgaaaggggccaaaatt 246  Q
    | |||||| ||||||||||||    
T  38630268 gagatgaagggggccaaaatt 38630288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 25 - 318
Target Start/End: Original strand, 44146983 - 44147276
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    |||||||| || | |||||||||||||||||| ||||| |||||||||         |||||||||||||| |||||||||||||||||||| |||||||    
T  44146983 acttttcgccctccaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgacccctatgtttagggaaatatgctattttgac 44147082  T
Q  125 cccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattt 224  Q
    | | |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||| || ||||||||||||||||||||    
T  44147083 ctcctaacataagggaaatatgctttttgaccccttatctttac-aaaagttgcgattatgaccccttttttgggatacatggcgtcttctcagcaattt 44147181  T
Q  225 tgggatgaaaggggccaaaatt-tccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    |||||| || | |||||||||| ||         |||||||| |||||||||||  ||||| ||||||| ||| ||| ||||||| |||||||||    
T  44147182 tgggataaaggaggccaaaattgtcattttttttaatagggggccaaaatcgcaatattttgaaacatatggggcgaaaagtgcactttagccta 44147276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 25 - 324
Target Start/End: Original strand, 19924276 - 19924577
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||| ||||||||||  ||||| |||| ||||         ||||||||||||||  ||||||||||||||||| || || |||    
T  19924276 acttttcgccctctaagttttaaaatgttgcaattttggccccttattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatactcttctga 19924375  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  19924376 cctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcagcaatt 19924475  T
Q  224 ttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcctatgtt 322  Q
    ||  ||| ||||||||||||||| | |        |||| ||| ||||||| | |  ||||||||||||||||||||| |||||||||||||||| ||||    
T  19924476 ttttgataaaaggggccaaaattacaattttttttaataaggggccaaaattgtaacattttaaaacataggggacgaaaagtgcagtttagcctttgtt 19924575  T
Q  323 tt 324  Q
    ||    
T  19924576 tt 19924577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 17648254 - 17648473
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||| | ||||| | |||||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  17648254 acttttcgccctctaagtttcaaaatgttgtgattttggctccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttga 17648353  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||    
T  17648354 cctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccctttttaggacacgtggcctcttctcagcaatt 17648453  T
Q  224 ttgggatgaaaggggccaaa 243  Q
    || |||||||||||||||||    
T  17648454 tttggatgaaaggggccaaa 17648473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 83 - 318
Target Start/End: Original strand, 33895443 - 33895679
Alignment:
Q  83 gcaaaagtga-cccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaat 181  Q
    |||||||||| ||| |||||||||||||||||||| |||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  33895443 gcaaaagtgatcccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttaaccccttatctttacaaaaagttgcaat 33895542  T
Q  182 tatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataa 280  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||| | |        |||||||||||||||| |||  |    
T  33895543 tatgg-ccctttttttggacacgtggcgtcttctcagaaatttttggatgaaaggggccaaaattgctattttttttaataggggaccaaaattgcaaca 33895641  T
Q  281 ttttaaaacataggggacgagaagtgcagtttagccta 318  Q
    |||||||| ||||||| ||| |||||||||||||||||    
T  33895642 ttttaaaatatagggggcgaaaagtgcagtttagccta 33895679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 18 - 313
Target Start/End: Complemental strand, 22452473 - 22452176
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacc-catatgtttagggaaatatgct 116  Q
    |||||| |||||| | ||||||| ||||||||| ||||| |||||  ||||||||         ||||||||||||| ||||| ||||||||||||||||    
T  22452473 aaactccacttttagccccctaaatttcaaaatattgcgattttggtcccctattaaaaaaaacggcaaaagtgacctcatatatttagggaaatatgct 22452374  T
Q  117 tttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
     |||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||| | ||| |||| ||||||||||||||||||||||||||    
T  22452373 cttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgaatatagccctttttttgggacacgtggcgtcttctc 22452274  T
Q  217 agcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagttta 313  Q
    ||||||||||||| |||| ||||||||||| |||        |||||||| | ||||| |||  ||||||||| ||||||| ||| ||||||||||||    
T  22452273 agcaattttgggacgaaatgggccaaaattaccattttttttaatagggggctaaaattgcaacattttaaaatatagggggcgaaaagtgcagttta 22452176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 12723554 - 12723332
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||| ||||| |||||||||         ||||||| ||||||  ||||||||| |||||||||| ||||||    
T  12723554 acttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaaatgaccccctatgtttagagaaatatgctcttttga 12723455  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||    
T  12723454 cctcctaacataagggaaatatgttttttgacccgttatctttacaaaaagttgcgattatggtcccttttttgggacacatggcgtcttctcagcaatt 12723355  T
Q  224 ttgggatgaaaggggccaaaatt 246  Q
    || | ||||||||||||||||||    
T  12723354 tttgcatgaaaggggccaaaatt 12723332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 30784557 - 30784336
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||| ||||| |||| ||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  30784557 acttttcgccctctaagtttcaaaatgttgcgattttggccccttattaaaaaaaatggcaaaagtgaccccgtatgtttagggaaatatgctcttttga 30784458  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||||||||||    
T  30784457 cctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgg-cccttttttgggacacgtgacttcttctcagcaatt 30784359  T
Q  224 ttgggatgaaaggggccaaaatt 246  Q
    || ||||||| ||||||||||||    
T  30784358 tttggatgaatggggccaaaatt 30784336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 25 - 318
Target Start/End: Complemental strand, 18881794 - 18881502
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    |||||||| ||||||||||| | ||||||||  |||||||||||||||         ||||||||||||||||  ||||||||||||||||| ||||||     
T  18881794 acttttcgccccctaagttttataatgttgcaattttgaccccctattaaaaaaaatggcaaaagtgacccat--gtttagggaaatatgctattttgag 18881697  T
Q  125 cccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    |   |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||| ||||||||| |||||    
T  18881696 cttctaacataagggaaatacgctcttttgaccccttatctttacaaaaagttgcaattatgaccccttatttgggacacttggtgtcttctcaacaatt 18881597  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    |||||| ||| |||||||||||| |||       |||||||| |||||||||||  |||| ||||| || ||| ||| ||| |||||||||||||    
T  18881596 ttgggacgaagggggccaaaattgccatttttttaatagggggccaaaatcgcaacatttcaaaacttaagggtcgaaaagcgcagtttagccta 18881502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 21666566 - 21666345
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccat-atgtttagggaaatatgcttttttga 123  Q
    |||||| | ||||| ||||||||||||||||| ||||| |||||||||         ||||||||||||||   ||||||||||||||||||| | ||||    
T  21666566 actttttgcccccttagtttcaaaatgttgcgattttggccccctattaaaaaaat-ggcaaaagtgaccccccatgtttagggaaatatgctctcttga 21666468  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    |||| |||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21666467 ccccctaacataagggaaatatgttttttgaccccttatctttagataaagttgcaattatggccccttttttgggacacatggcgtcttctcagcaatt 21666368  T
Q  224 ttgggatgaaaggggccaaaatt 246  Q
    ||| || ||| ||||||||||||    
T  21666367 ttgagacgaagggggccaaaatt 21666345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 82 - 315
Target Start/End: Complemental strand, 32400558 - 32400325
Alignment:
Q  82 ggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||||  ||||||||| |||||||||  |||||||||| ||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  32400558 ggcaaaagtgaccccctatgtttagtgaaatatgcgcttttgaccccctaacataagggaaatatgccttttgaccatttatctttacaaaaagttgcaa 32400459  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataa 280  Q
    ||||| |||||||||||| |||||||| ||||||||||||||||||| |||||| |||| ||| || |||       ||||||| | ||||||||||  |    
T  32400458 ttatgaccccttttttggaacacgtggtgtcttctcagcaattttggtatgaaa-gggctaaagttgccatttttttaatagggaatcaaaatcgcaaca 32400360  T
Q  281 ttttaaaacataggggacgagaagtgcagtttagc 315  Q
    ||||||||||||| || ||||||||||||||||||    
T  32400359 ttttaaaacatagagggcgagaagtgcagtttagc 32400325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 83 - 319
Target Start/End: Complemental strand, 4807836 - 4807597
Alignment:
Q  83 gcaaaagtgacccat--atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||| |  ||||||| ||||||||| | |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  4807836 gcaaaagtgacccctctatgtttaaggaaatatgttcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcga 4807737  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcata 279  Q
    |||||||||||||||||| ||||||||||||||||||| |||||| |||||||| | ||||||||| | |        |||||||| ||||||| |||      
T  4807736 ttatggccccttttttggaacacgtggcgtcttctcagtaatttttggatgaaatgtgccaaaattgctattttttttaatagggggccaaaattgcaac 4807637  T
Q  280 attttaaaacataggggacgagaagtgcagtttagcctat 319  Q
    ||||| ||||||||| | ||| ||||||||||||||||||    
T  4807636 attttgaaacataggaggcgaaaagtgcagtttagcctat 4807597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 38 - 246
Target Start/End: Complemental strand, 7117393 - 7117185
Alignment:
Q  38 taagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataag 137  Q
    |||||||||||| |||||| |||||||| ||||||         ||||||||||||||  |||||||| |||||||||| |||||||||  ||||| |||    
T  7117393 taagtttcaaaaagttgcgattttgaccacctattaaaaaaaatggcaaaagtgacccc-atgtttagagaaatatgctcttttgacccactaacagaag 7117295  T
Q  138 ggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaagg 236  Q
    || ||| || | |||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||| ||| ||||||    
T  7117294 gggaatgtgttcttttaaccccttatctttacaaaaagttgcaattatggccctttttttgggacatgtggcgtcttctcagcagttttaggacgaaagg 7117195  T
Q  237 ggccaaaatt 246  Q
    ||||||||||    
T  7117194 ggccaaaatt 7117185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 85 - 243
Target Start/End: Complemental strand, 18253117 - 18252960
Alignment:
Q  85 aaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgcttttt-gaccccttatctttacaaaaagttgcaatta 183  Q
    |||||||||||  ||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||| |||||||||||||  ||||||||||  ||||    
T  18253117 aaaagtgacccc-atgtttagggaaatatgtttttttgacccat-aacataagggaaatatgattttttgaccccttatcttctcaaaaagttgtgatta 18253020  T
Q  184 tggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaa 243  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18253019 tggccactgttttgggacacgtggcgtcttctcagcaattttgggacgaaaggggccaaa 18252960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 138 - 319
Target Start/End: Original strand, 23565214 - 23565396
Alignment:
Q  138 ggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggg 237  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||   ||| |||||||||||||||||||||| |||||||||||    
T  23565214 ggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccttttttttaaacatgtggcgtcttctcagcaatttttggatgaaaggg 23565313  T
Q  238 gccaaaatt-tccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcctat 319  Q
    ||||||||| ||         ||||||||  |||||| |||  ||||||||||||||||| ||| ||||  ||||||||||||    
T  23565314 gccaaaattgtcattttttttaatagggggtcaaaattgcaacattttaaaacatagggggcgaaaagtctagtttagcctat 23565396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 97 - 235
Target Start/End: Original strand, 3208064 - 3208202
Alignment:
Q  97 tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttt 195  Q
    |||||||||||||||||| | ||||||||||| ||||||||||||||||| | |||||||||||||||||   |||||||||| |||||| ||| |||||    
T  3208064 tatgtttagggaaatatgttcttttgacccct-aacataagggaaatatgatattttgaccccttatcttcttaaaaagttgcgattatgacccattttt 3208162  T
Q  196 tgggacacgtggcgtcttctcagcaattttgggatgaaag 235  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  3208163 tgggacacgtggcgtcttctcagtaattttgggacgaaag 3208202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 82 - 246
Target Start/End: Original strand, 1824675 - 1824837
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||| ||||||||| ||||||| | |||| ||  ||||||||  ||||||||||| |    
T  1824675 ggcaaaagtgacccc-atgtttagggaaatatgctcttttgacccct-aacataaggaaaatatgatcttttaacttcttatcttctcaaaaagttgcga 1824772  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
     |||||||  | ||||||||||||||||||||||||| |||||||| || ||||||||||||||||    
T  1824773 gtatggcct-tgttttgggacacgtggcgtcttctcaacaattttgagacgaaaggggccaaaatt 1824837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 82 - 246
Target Start/End: Original strand, 1859120 - 1859282
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||| ||||||||| ||||||| | |||| ||  ||||||||  ||||||||||| |    
T  1859120 ggcaaaagtgacccc-atgtttagggaaatatgctcttttgacccct-aacataaggaaaatatgatcttttaacttcttatcttctcaaaaagttgcga 1859217  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
     |||||||  | ||||||||||||||||||||||||| |||||||| || ||||||||||||||||    
T  1859218 gtatggcct-tgttttgggacacgtggcgtcttctcaacaattttgagacgaaaggggccaaaatt 1859282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 25 - 153
Target Start/End: Complemental strand, 21930094 - 21929967
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    |||||||| || |||||||||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||||| |||||||    
T  21930094 acttttcgccctctaagtttcaaaatgttgcgattttgaccccctattaaaaaaat-ggcaaaagtgacccctatgtttagggaaatatgctcttttgac 21929996  T
Q  125 cccttaacataagggaaatatgctttttg 153  Q
    | | |||||||||||||||||||||||||    
T  21929995 ctcctaacataagggaaatatgctttttg 21929967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 99 - 246
Target Start/End: Original strand, 31268365 - 31268512
Alignment:
Q  99 tgtttagggaaatatgcttttttgaccccttaacataagggaaatatgcttttt-gaccccttatctttacaaaaagttgcaattatgg-cccctttttt 196  Q
    |||||||||||||||||| ||||| |||| ||||||||||||| |||||| ||| ||||| ||||||||| |||||||||  ||||||  ||||||||||    
T  31268365 tgtttagggaaatatgctcttttg-ccccataacataagggaa-tatgctctttagaccctttatctttataaaaagttgtgattatgatcccctttttt 31268462  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||| | |||||||||| ||||||||| ||| ||||||||||||||||    
T  31268463 gggacatgcggcgtcttcttagcaattttaggacgaaaggggccaaaatt 31268512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 82 - 225
Target Start/End: Complemental strand, 41688344 - 41688202
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaa 180  Q
    |||||| |||||||||  |||||| |||||||| | ||||||||||||||||||||  |||| || | |||||||||||||||||  ||||||||||| |    
T  41688344 ggcaaacgtgacccat--gtttagagaaatatgttcttttgaccccttaacataagaaaaatctgatattttgaccccttatcttctcaaaaagttgcga 41688247  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaatttt 225  Q
    ||||| ||| | ||||||||||||| | |||||||||||||||||    
T  41688246 ttatgacccatgttttgggacacgtagtgtcttctcagcaatttt 41688202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 98 - 246
Target Start/End: Complemental strand, 4423250 - 4423101
Alignment:
Q  98 atgtttagggaaatatgcttttttgacc-ccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttt 195  Q
    ||||||| ||||||||| | |||| ||| || |||||||||||||||||| | |||||||||||||||||| |||||| |||| ||||| | ||||||||    
T  4423250 atgtttatggaaatatgttcttttaacctccataacataagggaaatatgatcttttgaccccttatcttttcaaaaaattgcgattat-gacccttttt 4423152  T
Q  196 tgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |   ||| ||||| |||||||||||||||||||| ||| ||| ||||||||    
T  4423151 tttaacatgtggcatcttctcagcaattttgggacgaaggggaccaaaatt 4423101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 15869557 - 15869408
Alignment:
Q  97 tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttt 195  Q
    ||||||||| |||||||||| |||||||| || ||| |||| |||||||| | ||||||||   | ||||  ||||||||||| |||||| ||||| |||    
T  15869557 tatgtttagagaaatatgctcttttgacctct-aac-taagagaaatatgatcttttgaccatctgtcttctcaaaaagttgcgattatgacccctgttt 15869460  T
Q  196 tgggacacgtggcgtcttctcagcaattttgggatgaaa-ggggccaaaatt 246  Q
    |||||||||||||| ||||||||||||||| | |||||| ||||||||||||    
T  15869459 tgggacacgtggcgacttctcagcaattttagaatgaaagggggccaaaatt 15869408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 21929972 - 21929918
Alignment:
Q  192 tttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21929972 tttttgggacacgtggcgtcttctcagcaattttgggatgaagggggccaaaatt 21929918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 3380283 - 3380365
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||| ||||||||| ||||| |||  || ||||||||||||||| ||||||||| ||||||| |||||||||||||||    
T  3380283 atgtttaggtaaatatgctcttttgtccctctagcataagggaaatatgttttttgacctcttatctctacaaaaagttgcaa 3380365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 16233581 - 16233671
Alignment:
Q  138 ggaaatatgctttttgaccc-cttatctttacaaaaagttgcaattatgg-ccccttttttgggacacgtggcgtcttctcagcaattttg 226  Q
    ||||||||||| |||  ||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||  ||||||||||||| ||||    
T  16233581 ggaaatatgctctttcgccctcttatctttacaaaaagttgcaattatggccccctgttttgggacacgtgatgtcttctcagcaactttg 16233671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 108 - 238
Target Start/End: Complemental strand, 41385700 - 41385569
Alignment:
Q  108 aaatatgcttttttgaccccttaacataagggaaatatgcttttt-gaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtg 206  Q
    |||||| || ||||||| |  |||||||||||||||||| ||||| ||||||||||| |  ||||||||||  |||||||| ||| | ||||||||||||    
T  41385700 aaatatactcttttgactctctaacataagggaaatatgattttttgaccccttatcatctcaaaaagttgtgattatggcacctgtcttgggacacgtg 41385601  T
Q  207 gcgtcttctcagcaattttgggatgaaagggg 238  Q
    |||| ||||||  |||||| |||  |||||||    
T  41385600 gcgtattctcaataattttaggacaaaagggg 41385569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 132538 - 132586
Alignment:
Q  169 aaaaagttgcaattatggccccttttttgggacacgtggcgtcttctca 217  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||    
T  132538 aaaaagttgcaattttggccccttttttgggacacgtggcggcttctca 132586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 8137635 - 8137721
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttacaaaa-agttgcaattatggccccttttttgggacacgtggcgtcttctcagca 220  Q
    ||||||||||||| ||||| |||||||||||  ||||| ||||||||||||||| | ||||||| ||||||| ||| ||||||||||    
T  8137635 agggaaatatgctcttttgcccccttatcttcgcaaaatagttgcaattatggctcattttttgagacacgttgcggcttctcagca 8137721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 217
Target Start/End: Complemental strand, 16236668 - 16236552
Alignment:
Q  102 ttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatg-gccccttttttggga 200  Q
    |||| |||||||||| ||||||| |  |||| ||||  |||||||||||||  ||||||||  ||||||| | |||||||||||  ||||| |||||| |    
T  16236668 ttagagaaatatgctattttgacgctctaacttaagaaaaatatgcttttttgccccttattattacaaatatttgcaattatgaccccctgttttggta 16236569  T
Q  201 cacgtggcgtcttctca 217  Q
    || ||||||||||||||    
T  16236568 catgtggcgtcttctca 16236552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 19392859 - 19392812
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||||| || |||||||||||||||||||| ||||| |||||||||    
T  19392859 acttttcgccctctaagtttcaaaatgttgcgattttggccccctatt 19392812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 217
Target Start/End: Original strand, 2053264 - 2053382
Alignment:
Q  101 tttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattat-ggccccttttttgg 198  Q
    |||| ||||||||||| |||| ||||  || | | || |||||| ||| ||||||||| ||| ||||| |||||||||||||| | | ||||| ||||||    
T  2053264 tttatggaaatatgctcttttaaccctctatctttagagaaataagctcttttgaccctttacctttataaaaagttgcaattttagccccctgttttgg 2053363  T
Q  199 gacacgtggcgtcttctca 217  Q
    || ||||||| ||||||||    
T  2053364 gatacgtggcatcttctca 2053382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 4423049 - 4423087
Alignment:
Q  34 cccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  4423049 cccctaagtttcaaaaagttgcgattttgaccccctatt 4423087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 2e-74; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 97 - 318
Target Start/End: Complemental strand, 35102711 - 35102489
Alignment:
Q  97 tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    |||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35102711 tatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 35102612  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggg 295  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||        |||||||| | |||||||||  ||||| ||||||||||    
T  35102611 gggacacgtggcgtcttctcagcaattttgggatgaagggggccaaaattgccattttttttaatagggggctaaaatcgcaacattttgaaacataggg 35102512  T
Q  296 gacgagaagtgcagtttagccta 318  Q
    | ||| ||||||| |||||||||    
T  35102511 ggcgaaaagtgcactttagccta 35102489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 25 - 317
Target Start/End: Original strand, 18791369 - 18791663
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||| ||||||||||| ||||| ||| |||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  18791369 acttttcgccctctaagttttaaaatgttgcgattttggccctctattaaaaaaat-ggcaaaagtgaccccctatgtttagggaaatatgctcttttga 18791467  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||    
T  18791468 ccccctaacataagggaaatatgctttttgacccctcatctttacaaaaagttgcgattatggccccttttttaggacacgtggcgtcttctcaacaatt 18791567  T
Q  224 ttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacata-ggggacgagaagtgcagtttagcct 317  Q
    |||||||||| |||||||||||| |||        |||||||| |||||||||||  ||||||||||||| |||||||| ||||||| ||||||||    
T  18791568 ttgggatgaagggggccaaaattgccatttttttaaatagggggccaaaatcgcaacattttaaaacatagggggacgaaaagtgcactttagcct 18791663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 25 - 316
Target Start/End: Original strand, 25819696 - 25819988
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    |||||||| || |||||||| ||||||||||  ||||| |||||||||         |||||||||||||| ||||||||||||||||| || || ||||    
T  25819696 acttttcgccctctaagttttaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgacccctatgtttagggaaatatactcttctgac 25819795  T
Q  125 cccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattt 224  Q
    | | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  25819796 ctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcgtcttctcagcaattt 25819895  T
Q  225 tgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    |  ||| ||||||||||||||| | |        |||||||| ||||||| | |  ||||||||||||||||||||| |||||||||||||||    
T  25819896 tttgataaaaggggccaaaattacaattttttttaatagggggccaaaattgtaacattttaaaacataggggacgaaaagtgcagtttagcc 25819988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 25 - 319
Target Start/End: Complemental strand, 4597698 - 4597402
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||  ||||| |||||||||         ||||||| ||||||  |||||||||||||||||||| ||||||    
T  4597698 acttttcgccctctaagtttcaaaatgttgcaattttggccccctattataaaaaatggcaaaaatgaccccctatgtttagggaaatatgctcttttga 4597599  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||    
T  4597598 cctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacatgtggcgtcttttcagtaatt 4597499  T
Q  224 ttgggatgaaaggggccaaaatt-tccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcctat 319  Q
    ||||| |||| |||||||||||| ||         ||||||||||||||||||||  ||||| ||||||||||| ||| ||||||| |||| |||||    
T  4597498 ttgggttgaagggggccaaaattgtcattttttttaataggggaccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttatcctat 4597402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 24603372 - 24603591
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||||||  ||||||||||||||||||| |||||  ||||||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  24603372 acttttcgtcctttaagtttcaaaatgttgcgattttgctcccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttga 24603471  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||    
T  24603472 cctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccctttttttggacacatggcgtcttctcagcaatt 24603571  T
Q  224 ttgggatgaaaggggccaaa 243  Q
    |||||||||| |||||||||    
T  24603572 ttgggatgaagggggccaaa 24603591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 34833993 - 34834229
Alignment:
Q  82 ggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||||  |||||||||||||||||||| |||||||| | |||||||||||||||||| |||||||||| |||||||||||||||||| |||    
T  34833993 ggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgacccgttatctttacaaaaagttacaa 34834092  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataa 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||       |||||| |  ||||||||||  |    
T  34834093 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaagtgggccaaaattgccatttttttaataggaggtcaaaatcgcaata 34834192  T
Q  281 ttttaaaacataggggacgagaagtgcagtttagcct 317  Q
    |||||||||||| ||| ||| ||||||| ||||||||    
T  34834193 ttttaaaacataaggggcgaaaagtgcactttagcct 34834229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 82 - 312
Target Start/End: Complemental strand, 14572413 - 14572182
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaat 181  Q
    |||||||||||||| |||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  14572413 ggcaaaagtgacccctatgtttagggaaatatgctcttttgacatcctaacataagggaaatatgctttttgaccccttatctttataaaaagttgcgat 14572314  T
Q  182 tatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataa 280  Q
    |||||||| |||||||||||| ||||| |||||||||||||||| |||||||||||||||||||| | |        |||||||| ||||||| |||  |    
T  14572313 tatggccctttttttgggacatgtggcatcttctcagcaatttttggatgaaaggggccaaaattgctattttttttaatagggggccaaaattgcaaca 14572214  T
Q  281 ttttaaaacataggggacgagaagtgcagttt 312  Q
    |||||||||||||||| ||| |||||||||||    
T  14572213 ttttaaaacatagggggcgaaaagtgcagttt 14572182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 31210805 - 31211027
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||| ||||||||||| ||||| || ||||||         | ||||||||||||  |||||||||| ||||||||| ||||||    
T  31210805 acttttcgccctctaagttttaaaatgttgcgattttggcctcctattaaaaaaaatgacaaaagtgaccccctatgtttaggaaaatatgctcttttga 31210904  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||| |||||||||||||||    
T  31210905 cctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatagcaccttttttgggacacgtggtgtcttctcagcaatt 31211004  T
Q  224 ttgggatgaaaggggccaaaatt 246  Q
    |||||||||||||||||||||||    
T  31211005 ttgggatgaaaggggccaaaatt 31211027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 25 - 248
Target Start/End: Original strand, 22269421 - 22269641
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    ||||||||||| |||||||||||||| ||||| ||||| ||| |||||         |||||||||||||| |||||||||||||||||| | |||||||    
T  22269421 acttttcgtcctctaagtttcaaaatattgcgattttggccctctattaaaaaat--ggcaaaagtgacccctatgtttagggaaatatgttcttttgac 22269518  T
Q  125 cccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattt 224  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| ||||||    
T  22269519 cc-ttaacataagggaaatatgttttttgaccccttatctttacaaaaagttgtgtttatggccccttttttgggacacgtggcgtcttctcaacaattt 22269617  T
Q  225 tgggatgaaaggggccaaaatttc 248  Q
    || || ||||||||||||| ||||    
T  22269618 tgagacgaaaggggccaaattttc 22269641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 26710600 - 26710379
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||| ||||| |||||||||         |||||||| |||||  |||||||||||||||||||| ||||||    
T  26710600 acttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagcgaccccctatgtttagggaaatatgctcttttga 26710501  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||    
T  26710500 cctcctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacgtggcatcttctcagtaatt 26710401  T
Q  224 ttgggatgaaaggggccaaaatt 246  Q
    |||||||| |||||||| |||||    
T  26710400 ttgggatg-aaggggccgaaatt 26710379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 25 - 318
Target Start/End: Original strand, 32451737 - 32452032
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||| | ||||| |||||||||         ||||||||||||||  ||||||||  |||||||||| ||||||    
T  32451737 acttttcgccctctaagtttcaaaatgttgtgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttatagaaatatgctcttttga 32451836  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||| |||||||||||||| |||||    
T  32451837 cctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccccttttttgagacatgtggcgtcttctcaacaatt 32451936  T
Q  224 ttgggatgaaaggggccaaaatt-tccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    || |||||||||||||||||||| |          ||||||||  |||||| |||  ||||| ||||||||||||| | |||||||||||||||||    
T  32451937 tttggatgaaaggggccaaaattgtttttttttttaatagggggtcaaaattgcaacattttgaaacataggggacaaaaagtgcagtttagccta 32452032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 24051020 - 24051241
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||| ||||| |||||||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  24051020 acttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaat-ggcaaaagtgaccccctatgtttagggaaatatgctcttttga 24051118  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | ||||||||| ||||||| |||||||||||||||| ||||||||||||||| |||||| || |||||||||||||||||||||||||||| |||||    
T  24051119 cctcctaacataagagaaatatactttttgaccccttatatttacaaaaagttgcgattatgacctcttttttgggacacgtggcgtcttctcatcaatt 24051218  T
Q  224 ttgggatgaaaggggccaaaatt 246  Q
    ||||||||||| |||||||||||    
T  24051219 ttgggatgaaatgggccaaaatt 24051241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 22 - 246
Target Start/End: Original strand, 3118689 - 3118912
Alignment:
Q  22 tctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttt 120  Q
    ||||||||||| | |||||||||||||||||| || |||||| ||||||||         ||||||||||||||  |||||||||||||||||||| |||    
T  3118689 tctacttttcgcctcctaagtttcaaaatgttacgattttgatcccctattaaaaaat--ggcaaaagtgaccctctatgtttagggaaatatgctcttt 3118786  T
Q  121 tgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagca 220  Q
    ||||||| |||||||||||||||||| ||||||||| |||||||||||||||| |||| |||||| |||||||| ||||||||||| | |||||| | ||    
T  3118787 tgaccccctaacataagggaaatatgttttttgacctcttatctttacaaaaatttgcgattatgaccccttttctgggacacgtgacatcttctgatca 3118886  T
Q  221 attttgggatgaaaggggccaaaatt 246  Q
    ||||||||||||||||||||||||||    
T  3118887 attttgggatgaaaggggccaaaatt 3118912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 22968446 - 22968227
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| ||| ||||||||||||||||||| ||||| |||| ||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  22968446 acttttcgccccttaagtttcaaaatgttgcgattttggcccc-tattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttga 22968348  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| | ||||||| || |||||||| | |||||| |||||||    
T  22968347 ccccctaacataagggaaatatgttttttga-cccttatctttacaaaaagttgcgattat-gacccttttctgagacacgtgacatcttctgagcaatt 22968250  T
Q  224 ttgggatgaaaggggccaaaatt 246  Q
    |||||||||||||||||||||||    
T  22968249 ttgggatgaaaggggccaaaatt 22968227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 23819947 - 23820166
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| ||| ||||||||||||||||||| ||||| |||| ||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  23819947 acttttcgccccttaagtttcaaaatgttgcgattttggcccc-tattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttga 23820045  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| | ||||||| || |||||||| | |||||| |||||||    
T  23820046 ccccctaacataagggaaatatgttttttga-cccttatctttacaaaaagttgcgattat-gacccttttctgagacacgtgacatcttctgagcaatt 23820143  T
Q  224 ttgggatgaaaggggccaaaatt 246  Q
    |||||||||||||||||||||||    
T  23820144 ttgggatgaaaggggccaaaatt 23820166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 104 - 319
Target Start/End: Complemental strand, 18749309 - 18749094
Alignment:
Q  104 agggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacac 203  Q
    ||||||||||| |  ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||     
T  18749309 agggaaatatgttcatttgacctcataacataagggaaatatgctttttgaccccttatctttacaaaaagttgtgattatgtccccttttttgggacat 18749210  T
Q  204 gtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaa 303  Q
    ||||| |||||| | ||||||| | |||||||||||||||||| | |       |||||||| ||||||| |||  ||||||||||||| ||| ||| ||    
T  18749209 gtggcttcttcttatcaatttttgtatgaaaggggccaaaattgctatttttttaatagggggccaaaattgcaacattttaaaacataaggggcgaaaa 18749110  T
Q  304 gtgcagtttagcctat 319  Q
    ||||||||||||||||    
T  18749109 gtgcagtttagcctat 18749094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 28 - 246
Target Start/End: Original strand, 15298500 - 15298717
Alignment:
Q  28 tttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccc 126  Q
    ||||| || ||||||||||||||||||||  |||| |||||||||         ||||||||||||||  |||||||||||||||||||| ||||||||     
T  15298500 tttcgccctctaagtttcaaaatgttgcgagtttggccccctattaaaaaaat-ggcaaaagtgaccccctatgtttagggaaatatgctcttttgacct 15298598  T
Q  127 cttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttg 226  Q
    | |||||||||| ||||||| ||||||| ||||||||||||||||||||||| |||||||  |||||||||||||| |||||||||||||||||||||||    
T  15298599 cctaacataaggaaaatatgttttttgatcccttatctttacaaaaagttgcgattatgg-tccttttttgggacaagtggcgtcttctcagcaattttg 15298697  T
Q  227 ggatgaaaggggccaaaatt 246  Q
     ||| || || |||||||||    
T  15298698 agataaagggagccaaaatt 15298717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 25 - 207
Target Start/End: Original strand, 8412769 - 8412952
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    ||||| || ||| ||||||||||||||||||| ||||| | |||||||         |||||||| |||||  ||||||||| |||||||||| ||||||    
T  8412769 actttccgccccttaagtttcaaaatgttgcgattttggctccctattaaaaaaaatggcaaaagcgaccccctatgtttagagaaatatgctcttttga 8412868  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtgg 207  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  8412869 ccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtgg 8412952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 84 - 246
Target Start/End: Original strand, 26240025 - 26240190
Alignment:
Q  84 caaaagtgacccat-atgtttagggaaatatgcttttttgacccc-ttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaa 180  Q
    |||||||||||| | ||||||| ||||||||||| |||||||||| ||||||||||||||||||| | |||||||||||||||||   ||||||||||||    
T  26240025 caaaagtgacccctcatgtttacggaaatatgctcttttgacccccttaacataagggaaatatgatcttttgaccccttatcttctaaaaaagttgcaa 26240124  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||||| |||||||| | ||||||||||||||||||| ||| |||||| | |||| |||||||||||    
T  26240125 ttatgaccccttttataggacacgtggcgtcttctcggcagttttggaacgaaatgggccaaaatt 26240190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 25 - 192
Target Start/End: Complemental strand, 4013958 - 4013791
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||         | ||||||||||||  ||||||||||||||||||| |||||||    
T  4013958 acttttcgtcccctaagtttcaaaatgttgcgattttggccccctattaaaaaaat-gtcaaaagtgacccccatgtttagggaaatatgctcttttgac 4013860  T
Q  125 cccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctt 192  Q
    ||| ||| |||||||||||||| | |||||||||||||||||  ||||| ||||| |||||||||||||    
T  4013859 cccctaatataagggaaatatgatcttttgaccccttatcttctcaaaatgttgcgattatggcccctt 4013791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 82 - 246
Target Start/End: Original strand, 4370966 - 4371125
Alignment:
Q  82 ggcaaaagtgacccat-atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctt-tttgaccccttatctttacaaaaagttgca 179  Q
    ||||||||||||||   ||||||||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||     
T  4370966 ggcaaaagtgaccctccatgtttagggaaatatgctcttttgacccct-aacataagggaaatatgctcctttgaccccttatctttacaaaaagttgcg 4371064  T
Q  180 attatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    | | |      ||||||||||||  |||||| ||||||||||||||| |||||||||||||||||||    
T  4371065 acttt------ttttttgggacatatggcgttttctcagcaattttgagatgaaaggggccaaaatt 4371125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 19282510 - 19282296
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccat-atgtttagggaaatatgct 116  Q
    ||||| ||||||||||||| ||||||| ||||| ||||  |||||||||| ||||         | |||||||||||| | ||||||| | |||||||||    
T  19282510 aaactgtacttttcgtcccgtaagttttaaaatattgcaattttgacccc-tattaaaaaaaatgacaaaagtgaccccttatgtttaagtaaatatgct 19282412  T
Q  117 tttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
     |||||| | | ||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||| |||||||||  ||||| ||| | |||||||    
T  19282411 attttgaactcctaacataagggaaatatgcattttgaccccttatcttttcaaaaagttgcgattatgaccccttttt--ggacatgtgacttcttctc 19282314  T
Q  217 agcaattttgggatgaaa 234  Q
    ||||||||||||| ||||    
T  19282313 agcaattttgggacgaaa 19282296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 102 - 248
Target Start/End: Complemental strand, 24615908 - 24615762
Alignment:
Q  102 ttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccct-tttttggga 200  Q
    ||||||||||||||| ||||||||||| |||||| | ||||||||||||||||||| || ||||||| ||||||||| |||||| ||| | |||||||||    
T  24615908 ttagggaaatatgctcttttgacccct-aacatatgagaaatatgctttttgacccattctctttactaaaagttgcgattatgacccttatttttggga 24615810  T
Q  201 cacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttc 248  Q
    || ||||||| |||||||||||||| ||| ||||| ||||||||||||    
T  24615809 catgtggcgttttctcagcaatttttggacgaaagaggccaaaatttc 24615762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 20863896 - 20863799
Alignment:
Q  149 ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | |||| ||||| |||||    
T  20863896 ttttgaccccttatctttacaaaaagttgcgattatggccccttttttgggacacatggcgtcttctcagcaattttggaacgaaaagggccgaaatt 20863799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 83 - 176
Target Start/End: Complemental strand, 32682512 - 32682419
Alignment:
Q  83 gcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagtt 176  Q
    ||||||||||||| |||||||||||||||||||| |||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  32682512 gcaaaagtgacccctatgtttagggaaatatgctcttttgacctcataacataaaggaaatatgttttttgaccccttatctttacaaaaagtt 32682419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 33 - 246
Target Start/End: Original strand, 34528171 - 34528381
Alignment:
Q  33 tcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaa 131  Q
    |||||||||||||||||||||||  ||||  |||| ||||         ||||||||||||||  |||||||||||||||||     |||| |||| |||    
T  34528171 tcccctaagtttcaaaatgttgctattttagccccttattaaaaaaaatggcaaaagtgaccctctatgtttagggaaatat-----tttggccccctaa 34528265  T
Q  132 cataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggat 230  Q
    |||||  |||||||| | |||||||||||||||||  ||||||||||| ||||||||  || |||||||||| |||  |||||||||||||||||||||     
T  34528266 cataaatgaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatggcgactgttttgggacatgtgatgtcttctcagcaattttgggac 34528365  T
Q  231 gaaaggggccaaaatt 246  Q
    ||||||||||||||||    
T  34528366 gaaaggggccaaaatt 34528381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 102 - 243
Target Start/End: Original strand, 9241742 - 9241882
Alignment:
Q  102 ttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttggga 200  Q
    ||||||||||||| | |||||||||  |||||||||||||||||| | |||||||||||||||||  ||||||||||| |||||| || || ||||||||    
T  9241742 ttagggaaatatgttcttttgaccc--taacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatgccctctgttttggga 9241839  T
Q  201 cacgtggcgtcttctcagcaattttgggatgaaaggggccaaa 243  Q
    ||| ||||| |||||||| |||||||| |||||||||| ||||    
T  9241840 cacatggcgccttctcagtaattttggaatgaaaggggtcaaa 9241882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 246
Target Start/End: Original strand, 12427299 - 12427466
Alignment:
Q  82 ggcaaaagtga-cccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttg-accccttatctttacaaaaa-gttgc 178  Q
    ||||||||||| |||  ||||||||||||||||||| |||||| || ||||||||| ||||||||| |||||  |||| ||||||||||||||| |||||    
T  12427299 ggcaaaagtgatcccccatgtttagggaaatatgctcttttgaaccattaacataaaggaaatatgttttttttaccctttatctttacaaaaaagttgc 12427398  T
Q  179 aattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
     ||| || ||| || ||||||||||||| | ||||||||||||||||| || ||||| ||||||||||    
T  12427399 gattttgacccattctttgggacacgtgccatcttctcagcaattttgcgacgaaagaggccaaaatt 12427466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 82 - 246
Target Start/End: Original strand, 2636846 - 2637011
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||| | ||| || |||||| ||||||| ||||||| ||||| ||||||||| ||||||||| |||||||||||||| ||||||||||||||| |    
T  2636846 ggcaaaagttatccacatatttaggaaaatatgtttttttgtcccct-aacataaggtaaatatgctattttgaccccttatttttacaaaaagttgcga 2636944  T
Q  181 ttatg-gccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||  ||||||| | || ||| |||||||||||||  ||||||| ||| ||||||||||||||||    
T  2636945 ttatgaccccctttctaggaacatgtggcgtcttctcttcaattttaggacgaaaggggccaaaatt 2637011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 84 - 246
Target Start/End: Complemental strand, 16415564 - 16415403
Alignment:
Q  84 caaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaatt 182  Q
    |||||||||||| |||||||||||||||||  | |||||||| | |||||||||||||||||| | |||||||| ||||||||   |||||||||| |||    
T  16415564 caaaagtgacccctatgtttagggaaatatattcttttgaccgcctaacataagggaaatatgatattttgaccgcttatcttctaaaaaagttgcgatt 16415465  T
Q  183 atggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||  ||| |||||| | |||  || |||||||||||||||||||||| ||||||| ||||||||    
T  16415464 ataacccattttttagaaca--tgtcgtcttctcagcaattttgggacgaaagggaccaaaatt 16415403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 18749421 - 18749299
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||||||||| |||||||||||||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  18749421 acttttcgccctctaagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttga 18749322  T
Q  124 ccccttaacataagggaaatatg 146  Q
    || ||||||||||||||||||||    
T  18749321 cctcttaacataagggaaatatg 18749299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 23124898 - 23124794
Alignment:
Q  140 aaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaagggg 238  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||  ||||| |||||||||||||||||| ||||||| ||| | ||    
T  23124898 aaatatgctcttttgaccccttatctttacaaaaagttgcgattatgacccctttttgaggacatgtggcgtcttctcagcaagtttgggacgaacgagg 23124799  T
Q  239 ccaaa 243  Q
    |||||    
T  23124798 ccaaa 23124794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 12291617 - 12291488
Alignment:
Q  118 ttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctc 216  Q
    |||||||||| |||||||||||||||||| | ||||||||| |||||||  ||||||||||| |||||| |  || ||||||||||| ||||||||||||    
T  12291617 ttttgaccccctaacataagggaaatatgatcttttgaccctttatcttctcaaaaagttgcgattatgacatctgttttgggacacatggcgtcttctc 12291518  T
Q  217 agcaattttgggatgaaaggggccaaaatt 246  Q
    | |||||||| || |||| || ||||||||    
T  12291517 aacaattttgtgacgaaatggaccaaaatt 12291488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 317 - 363
Target Start/End: Complemental strand, 7644119 - 7644073
Alignment:
Q  317 tatgttttactatgtattattctcatatattattgaaacctatgcta 363  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  7644119 tatgttttactatgtattattctcatatattattgaaacctatgcta 7644073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 2059103 - 2058993
Alignment:
Q  35 ccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccat-atgtttagggaaatatgcttttttgaccccttaaca 133  Q
    |||||| ||| ||||||||||| |||||||||||||||         |||||||||||||| | ||||||||||||||||||| ||||||| || |||||    
T  2059103 ccctaaattttaaaatgttgcgattttgaccccctattaaaaaat--ggcaaaagtgacccttcatgtttagggaaatatgctattttgacaccctaaca 2059006  T
Q  134 taagggaaatatg 146  Q
    |||||||||||||    
T  2059005 taagggaaatatg 2058993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 85 - 246
Target Start/End: Original strand, 14195631 - 14195792
Alignment:
Q  85 aaaagtgacccatatgtttagggaaatatgct-tttttgaccccttaacataagggaaatatgctttttga-ccccttatctttacaaaaagttgcaatt 182  Q
    |||||||||||  ||||| ||||||||||| | |||||||| |  |||||| ||||||||||| | ||| | |||||||| ||||||||||||||| |||    
T  14195631 aaaagtgacccc-atgttaagggaaatatgttctttttgactctctaacatgagggaaatatggtcttttagccccttatttttacaaaaagttgcgatt 14195729  T
Q  183 atggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||| | | ||||||  || ||||||||||| |||||||||||||| |  ||||| |||||||||    
T  14195730 atg-cactttttttttgaaacgtggcgtctactcagcaattttggaactaaaggagccaaaatt 14195792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 11661100 - 11661010
Alignment:
Q  138 ggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctt-ttttgggacacgtggcgtcttctcagcaattttg 226  Q
    ||||||||||| ||||  |||||||||||||||||||||||| ||| ||||||||| |||||||||| |||| ||||||| |||| |||||    
T  11661100 ggaaatatgctctttttcccccttatctttacaaaaagttgcgattttggccccttattttgggacatgtggtgtcttctaagcagttttg 11661010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 8414952 - 8414998
Alignment:
Q  200 acacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||||||||| |||||| ||||||||||||||||||| ||||||||||    
T  8414952 acacgtggcatcttctgagcaattttgggatgaaagtggccaaaatt 8414998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 2058982 - 2058905
Alignment:
Q  169 aaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||||||  |||||| ||||| |||| ||||| || |||||||||||||||||||| || ||||  ||||||||||    
T  2058982 aaaaagttgggattatgacccctgttttaggacatgtagcgtcttctcagcaattttgagacgaaaatggccaaaatt 2058905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 4013911 - 4013968
Alignment:
Q  258 aataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagc 315  Q
    |||||||| |||||||||||  ||||| |||| |||||||||| ||||||||||||||    
T  4013911 aatagggggccaaaatcgcaacattttgaaacttaggggacgaaaagtgcagtttagc 4013968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 8149142 - 8149060
Alignment:
Q  83 gcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatcttt 166  Q
    ||||||||||||||||  |||| ||||||||  | ||||||||| |||||||| |||||||||| | ||||||| ||||||||||    
T  8149142 gcaaaagtgacccata--tttaaggaaatataatcttttgaccctttaacataggggaaatatgatcttttgactccttatcttt 8149060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 12291430 - 12291475
Alignment:
Q  27 ttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||||||||||||||||||||||||||| ||||| |||| ||||    
T  12291430 ttttcgtcccctaagtttcaaaatgttgcgattttggccccttatt 12291475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 218
Target Start/End: Original strand, 12293663 - 12293783
Alignment:
Q  101 tttagggaaatatgcttttttgaccccttaacataagggaaat--atgctttttgaccccttatctttacaaaaagttgcaattatggcccctt-ttttg 197  Q
    |||| ||||||||||| |||||||| | |||| | ||||||||  ||  |||||| |||  ||||||||||||||||||| ||| |  |||| | |||||    
T  12293663 tttaaggaaatatgctcttttgacctcataactttagggaaatttattgtttttggccctctatctttacaaaaagttgcgattttaaccccctgttttg 12293762  T
Q  198 ggacacgtggcgtcttctcag 218  Q
    |||||||| ||||||||||||    
T  12293763 ggacacgtagcgtcttctcag 12293783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 29365378 - 29365499
Alignment:
Q  101 tttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttt-tttgg 198  Q
    ||||||||||||  |||||||||||| |||   |  | |||||| ||| ||||| ||| |||||||||||||||||||||||| |||||||    |||||    
T  29365378 tttagggaaatacacttttttgaccctttatattttgagaaataagctcttttggccctttatctttacaaaaagttgcaattttggccccccgctttgg 29365477  T
Q  199 gacacgtggcgtcttctcagca 220  Q
     |||| ||||||||||||||||    
T  29365478 cacacatggcgtcttctcagca 29365499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 32452019 - 32451972
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    |||||| |||||||| |||||||||||||||  |||||||||||||||    
T  32452019 actttttgtcccctatgtttcaaaatgttgcaattttgaccccctatt 32451972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 19176499 - 19176579
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttacaaaaa-gttgcaattatggccccttttttgggacacgtggcgtcttct 215  Q
    ||||||||||||| ||||||| | ||||||||||||||| ||||| | |||| ||| |||| |||||||||||||| |||||    
T  19176499 agggaaatatgctattttgacacattatctttacaaaaaagttgcgactatgacccatttt-tgggacacgtggcggcttct 19176579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 19176812 - 19176856
Alignment:
Q  27 ttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctat 71  Q
    |||||| ||||||||||| ||||||||||| |||||| |||||||    
T  19176812 ttttcgccccctaagtttgaaaatgttgcgattttgatcccctat 19176856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 18 - 318
Target Start/End: Original strand, 2001 - 2296
Alignment:
Q  18 aaactctacttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgctt 117  Q
    ||||| ||||||||| || |||||||| ||||||||||| |||||||||||||||         |||||||||||||| |     ||||||||||||||     
T  2001 aaactttacttttcgccctctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgacccct-----tagggaaatatgctc 2095  T
Q  118 ttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctca 217  Q
    |||||||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  2096 ttttgacctcctaacataagggaaacatgctttttgaccccatatctttacaaaaagttgcgattatagccccttttttgggacacgtggcgtcttctca 2195  T
Q  218 gcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcct 317  Q
    |||||||| |||||||||||||||||||| | |       ||||| || ||||||| |||  |||||||||||| |||| ||| ||||||||||||||||    
T  2196 gcaatttttggatgaaaggggccaaaattgctatttttttaatagagggccaaaattgcaacattttaaaacatggggggcgaaaagtgcagtttagcct 2295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 2285 - 2047
Alignment:
Q  82 ggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||||  |||||||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  2285 ggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggcaatatgctttttgaccccttatctttacaaaaagttgcga 2186  T
Q  181 ttatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttcca--nnnnnnnaataggggaccaaaatcgcat 278  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |         |||||||| ||||||| |||     
T  2185 ttatgaccccttttttgggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaattgctatttttttttaatagggggccaaaattgcaa 2086  T
Q  279 aattttaaaacataggggacgagaagtgcagtttagcct 317  Q
     ||||||||||||||||| ||| ||||||||||||||||    
T  2085 cattttaaaacatagggggcgaaaagtgcagtttagcct 2047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 27 - 292
Target Start/End: Complemental strand, 25255 - 24988
Alignment:
Q  27 ttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttgacc 125  Q
    ||||||||| |||||||  ||||||||||| ||||| |||| ||||         || |||||||||||  |||||||||||||||||||| ||||||||    
T  25255 ttttcgtcctctaagttctaaaatgttgcgattttggccccttattaaaaaaaatggtaaaagtgaccccctatgtttagggaaatatgctcttttgacc 25156  T
Q  126 ccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatttt 225  Q
    || |||||||||||||||||||||||||||||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  25155 ccctaacataagggaaatatgctttttgaccccttatctttaacaaaagttgtgattatggccccttttttgggacacgtggcgtcttctcagcaatttt 25056  T
Q  226 gggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacata 292  Q
    || |||||||||||||||||| |||        ||||||||||||||||||||  |||||||||||||    
T  25055 ggtatgaaaggggccaaaattgccattttttttaataggggaccaaaatcgcaatattttaaaacata 24988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 131; Significance: 7e-68; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 25 - 318
Target Start/End: Original strand, 49670 - 49964
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| ||| ||||||| ||||||||||| |||||  ||||||||         |||| |||||||||  ||||||| |||||||||||| ||||||    
T  49670 acttttcgccccttaagttttaaaatgttgcgattttggacccctattaaaaaaaatggcacaagtgaccccctatgtttcgggaaatatgctcttttga 49769  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||| |||||| |||||||    
T  49770 ccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctgagcaatt 49869  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    ||||||||||||||||||||||| | |       ||||||||| ||||||||||  ||| | ||||||||||| ||| ||||||| |||||||||    
T  49870 ttgggatgaaaggggccaaaattgctattttttaaataggggatcaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagccta 49964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 25 - 318
Target Start/End: Original strand, 62209 - 62503
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| ||| ||||||| ||||||||||| |||||  ||||||||         |||| |||||||||  ||||||| |||||||||||| ||||||    
T  62209 acttttcgccccttaagttttaaaatgttgcgattttggacccctattaaaaaaaatggcacaagtgaccccctatgtttcgggaaatatgctcttttga 62308  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||| |||||| |||||||    
T  62309 ccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctgggacacgtggcatcttctgagcaatt 62408  T
Q  224 ttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    ||||||||||||||||||||||| | |       ||||||||| ||||||||||  ||| | ||||||||||| ||| ||||||| |||||||||    
T  62409 ttgggatgaaaggggccaaaattgctattttttaaataggggatcaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagccta 62503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 25 - 319
Target Start/End: Complemental strand, 5942 - 5647
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgaccca-tatgtttagggaaatatgcttttttga 123  Q
    |||||||| || |||||||||||||| ||||| ||||| |||||||||         ||||||||||||||  |||||||||||||||||||| ||||||    
T  5942 acttttcggcctctaagtttcaaaatattgcgattttggccccctatttaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttga 5843  T
Q  124 ccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    || | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  5842 cctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgg-cccttttttgggacacgtggcgtcttcgcagcaatt 5744  T
Q  224 ttgggatgaaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcctat 319  Q
    ||||||| |||||| |||||||| |||        |||||| | ||||||| | |  ||||| ||||||||||| ||| ||||||||||||||||||    
T  5743 ttgggataaaagggaccaaaattgccattttttttaataggaggccaaaattgtaacattttgaaacatagggggcgaaaagtgcagtttagcctat 5647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 142239 - 142018
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    |||||||| || |||||||| ||||||||||  |||||  ||||||||         |||||||||||||| |||||||||||||||||||| |||||||    
T  142239 acttttcgccctctaagttttaaaatgttgcaattttggtcccctattaaaaaaaatggcaaaagtgacccctatgtttagggaaatatgctcttttgac 142140  T
Q  125 cccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattt 224  Q
    | | |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  142139 ctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatggcccattttttgggacacgtggcgtcttctaagcaattt 142040  T
Q  225 tgggatgaaaggggccaaaatt 246  Q
    |  |||||||||||||||||||    
T  142039 ttagatgaaaggggccaaaatt 142018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 316
Target Start/End: Complemental strand, 141994 - 141945
Alignment:
Q  267 ccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    ||||||| |||  ||| ||||||||||||||||| |||||||||||||||    
T  141994 ccaaaattgcaacattataaaacataggggacgaaaagtgcagtttagcc 141945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 97 - 318
Target Start/End: Original strand, 5915 - 6136
Alignment:
Q  97 tatgtttagggaaatatgcttttttgacccct-taacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttt 195  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| | || |||||    
T  5915 tatgtttagggaaatatgctattttgacccccctaacataagggaaatatgctttttgaccccttatctttataaaaagttgcgattat-gacctttttt 6013  T
Q  196 tgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttccannnnnnnaataggggaccaaaatcgcataattttaaaacataggg 295  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||| |||       |||||||| |||||||||||  |||| |||||||||||    
T  6014 tgggacacgtggcatcttctcagcaattttgggatgaagggggccaaaattgccatttttttaatagggggccaaaatcgcaacatttaaaaacataggg 6113  T
Q  296 gacgagaagtgcagtttagccta 318  Q
    | ||| |||| || |||||||||    
T  6114 ggcgaaaagtacactttagccta 6136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 82 - 235
Target Start/End: Complemental strand, 3802 - 3650
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaat 181  Q
    ||||||||||||||  ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  3802 ggcaaaagtgacccc-atgtttagggaaatatgctcttttgaccccctaacataagggaaatatgctttttgaccccttatctttacaaaaagtttcgat 3704  T
Q  182 tatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaag 235  Q
    ||| ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  3703 tatagccccttttttgggacacgaggtgtcttctcagcaattttgggatgaaag 3650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 97 - 246
Target Start/End: Original strand, 66258 - 66407
Alignment:
Q  97 tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    |||||||||||||||||||| |||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  66258 tatgtttagggaaatatgctattttgacctcctaacataagggaactatgctttttgaccccttatctttacaaaaagttgcgattatgacccctttttt 66357  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
     | ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  66358 tgaacacgtggcgtcttctcagaaatttttggatgaaaggggccaaaatt 66407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 1048 - 827
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctattnnnnnnnnnggcaaaagtgacccatatgtttagggaaatatgcttttttgac 124  Q
    |||||||| ||||||||||| | ||||||||  |||||| ||||||||         ||||||||||||||  ||||||||||| ||||||| |||||||    
T  1048 acttttcg-cccctaagttttataatgttgcaattttgatcccctattaaaaaaaatggcaaaagtgaccccaatgtttagggatatatgctattttgac 950  T
Q  125 cccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaatt 223  Q
    |   |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||  ||||||||||||| |||||    
T  949 cttctaacataaggtaaatatgctcttttgaccccttatctttacaaaaagttgcaattatgaccccttatttgggacatctggcgtcttctcaacaatt 850  T
Q  224 ttgggatgaaaggggccaaaatt 246  Q
    |||||| ||| ||||||||||||    
T  849 ttgggacgaagggggccaaaatt 827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 132 - 316
Target Start/End: Complemental strand, 250703 - 250518
Alignment:
Q  132 cataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatg 231  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||  ||||    
T  250703 cataagggaaatatgttttttgaccccttatctttacaaaaagttgtgattatggccccttttttggggcacgtggcgtcttctcagcaattttcagatg 250604  T
Q  232 aaaggggccaaaatttcca-nnnnnnnaataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagcc 316  Q
    || |||||||||||| |||        ||||||||  |||| |||||  ||||||||||||||||| ||| ||||||| |||||||    
T  250603 aagggggccaaaattgccattttttttaatagggggtcaaagtcgcaacattttaaaacatagggggcgaaaagtgcactttagcc 250518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 86; Significance: 5e-41; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 455111 - 455260
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||||| ||||||| | |||| ||||| |||||||||||||||||| | |||||||||||||||||  | ||||||||| |||||| ||| ||||||    
T  455111 atgtttaggaaaatatgttcttttaaccccctaacataagggaaatatgatcttttgaccccttatcttctctaaaagttgcgattatgacccatttttt 455210  T
Q  197 gggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  455211 gggacatgtggcgtcttctcagcaattttgggatgaaaggggccgaaatt 455260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 455015 - 455083
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctt 165  Q
    ||||||||||||||||||| |||| ||||| |||||||| ||||||| | | |||||||||||||||||    
T  455015 atgtttagggaaatatgctcttttaaccccctaacataaaggaaatacgatcttttgaccccttatctt 455083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 455321 - 455274
Alignment:
Q  25 acttttcgtcccctaagtttcaaaatgttgcgcttttgaccccctatt 72  Q
    ||||||||  |||||||||||||||||||||| ||||| |||||||||    
T  455321 acttttcgaaccctaagtttcaaaatgttgcgattttggccccctatt 455274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 85 - 246
Target Start/End: Original strand, 29789 - 29949
Alignment:
Q  85 aaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaatta 183  Q
    |||||||||||  |||||| |||||||||||| ||| ||||||| ||||||||||||||||| | |||||||||||||||||  ||||||||||||||||    
T  29789 aaaagtgacccc-atgtttggggaaatatgctctttggacccct-aacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcaatta 29886  T
Q  184 tggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||||| ||  ||||| ||  |||||||||||||||||||||||||| ||||||||||||||||    
T  29887 tggcctctgatttggaacctgtggcgtcttctcagcaattttgggacgaaaggggccaaaatt 29949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1202 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 82 - 185
Target Start/End: Complemental strand, 2010 - 1906
Alignment:
Q  82 ggcaaaagtgaccca-tatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||||||||  |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2010 ggcaaaagtgaccccctatgtttagggaaatatgctattttgaccccctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcga 1911  T
Q  181 ttatg 185  Q
    |||||    
T  1910 ttatg 1906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 84 - 246
Target Start/End: Original strand, 9992 - 10154
Alignment:
Q  84 caaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgcttttt-gaccccttatctttacaaaaagttgcaatt 182  Q
    ||||||||||||  ||||||||||||||||||| ||||||||| | ||||||||| ||||||| | ||| |||||||||||||  ||||||||||| |||    
T  9992 caaaagtgaccctcatgtttagggaaatatgctcttttgacccat-aacataaggaaaatatgatctttagaccccttatcttctcaaaaagttgcgatt 10090  T
Q  183 atggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||  ||||||||||| |||| |||||||||||||| ||||||||||| ||||||| ||||||||    
T  10091 atttccccttttttgtgacatgtggcgtcttctcaacaattttgggacgaaagggaccaaaatt 10154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 10169 - 10229
Alignment:
Q  258 aataggggaccaaaatcgcataattttaaaacataggggacgagaagtgcagtttagccta 318  Q
    ||| ||| ||||||||||||   ||||||||| |||||| ||| |||||||||||||||||    
T  10169 aattgggtaccaaaatcgcaacgttttaaaacttaggggtcgaaaagtgcagtttagccta 10229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 101 - 246
Target Start/End: Original strand, 112214 - 112360
Alignment:
Q  101 tttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttggg 199  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||| | ||||||| |||||||||  |||||||||||  |||||| || |||||||||    
T  112214 tttagggaaatatgcctttttgacctcctaacataagggaaatatgatcttttgactccttatcttctcaaaaagttgcggttatggtccattttttggg 112313  T
Q  200 acacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||| ||||||||||||| |||||||| ||| ||||  ||||||||||    
T  112314 acatgtggcgtcttctctgcaattttaggacgaaaaaggccaaaatt 112360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 82 - 246
Target Start/End: Complemental strand, 3163 - 2998
Alignment:
Q  82 ggcaaaagtgacccatatgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaa 180  Q
    ||||||||| | ||| || |||||| ||||||| ||||||| ||||| ||||||||| ||||||||| |||||||||||||| ||||||||||||||| |    
T  3163 ggcaaaagttatccacatatttaggaaaatatgtttttttgtcccct-aacataaggtaaatatgctattttgaccccttatttttacaaaaagttgcga 3065  T
Q  181 ttatg-gccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||  ||||||| | || ||| |||||||||||||  ||||||| ||| ||||||||||||||||    
T  3064 ttatgaccccctttctaggaacatgtggcgtcttctcttcaattttaggacgaaaggggccaaaatt 2998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 98 - 226
Target Start/End: Complemental strand, 44043 - 43915
Alignment:
Q  98 atgtttagggaaatatgcttttttgaccccttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 196  Q
    ||||||||| ||||||||||||||||||||| |||  |||||||||||| | ||||||||  |||||||  ||||||||||| | ||||| |||| ||||    
T  44043 atgtttaggaaaatatgcttttttgacccct-aacgaaagggaaatatgatcttttgaccttttatcttctcaaaaagttgcgactatggtccctgtttt 43945  T
Q  197 gggacacgtggcgtcttctcagcaattttg 226  Q
    ||||||||||||||||||||||||||||||    
T  43944 gggacacgtggcgtcttctcagcaattttg 43915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 9168 - 9266
Alignment:
Q  149 ttttgaccccttatctttacaaaaagttgcaattatggcccc-ttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    ||||||||| |||||||| ||||||||||| |||||| |||| |||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||    
T  9168 ttttgacccattatcttttcaaaaagttgcgattatgacccccttttttgggacacgtgacgtcttctaagcaattttgggacgaaaggggccaaaatt 9266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 5258 - 5118
Alignment:
Q  180 attatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaatttcca--nnnnnnnaataggggaccaaaatcgca 277  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||| |||         |||||||||||||||| |||    
T  5258 attatggccccttttttgggacacatgacgtcttctcagcaatttttggatgaaaggggccaaaattgccatttttttttaataggggaccaaaattgca 5159  T
Q  278 taattttaaaacataggggacgagaagtgcagtttagccta 318  Q
      ||||| ||||||||||| ||| || || | |||||||||    
T  5158 acattttgaaacatagggggcgaaaaatgtaatttagccta 5118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 54492 - 54576
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagca 220  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||||||||    
T  54492 agggaaatatgctcttttggccccttatctttacaaaaagttgcgattatggcccc-tttttgggacatgtggcggcttctcagca 54576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0474 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 8129 - 8067
Alignment:
Q  168 caaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggat 230  Q
    |||||| |||| |||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  8129 caaaaatttgcgattatggcccctgttttgggacacgtggcatcttctcagcaattttgggat 8067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 35286 - 35175
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagcaattttgggatgaaa 234  Q
    |||||||||| || ||||||||||||||||||| ||||| |||  ||||||    |||||||| ||||| |||||| |||||| |||||||| || ||||    
T  35286 agggaaatatactcttttgaccccttatctttagaaaaacttgtgattatgatatcttttttgagacacatggcgttttctcaacaattttgagacgaaa 35187  T
Q  235 ggggccaaaatt 246  Q
    | ||||||||||    
T  35186 gaggccaaaatt 35175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 54989 - 55062
Alignment:
Q  136 agggaaatatgctttt-tgaccccttatctttac-aaaaagttgcaattatggccccttttttgggacacgtggc 208  Q
    ||||||||||| |||| ||||||||||||||||| ||||| |||||||| ||| |||||||||||||||||||||    
T  54989 agggaaatatgtttttttgaccccttatctttacaaaaaatttgcaattttgg-cccttttttgggacacgtggc 55062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 205057 - 205143
Alignment:
Q  136 agggaaatatgct-ttttgaccccttatctttac-aaaaagttgcaattatggccccttttttgggacacgtggcgtcttctcagca 220  Q
    ||||||||||||| ||||| |||||||||||||| |||||||| | ||| ||||||| ||||| |||||||||||| ||||| ||||    
T  205057 agggaaatatgctcttttggccccttatctttaccaaaaagttacgattttggccccctttttaggacacgtggcggcttcttagca 205143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 54982 - 55015
Alignment:
Q  97 tatgtttagggaaatatgcttttttgacccctta 130  Q
    |||||||||||||||||| |||||||||||||||    
T  54982 tatgtttagggaaatatgtttttttgacccctta 55015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 4694 - 4616
Alignment:
Q  140 aaatatgct-ttttgaccccttatctttaca-aaaagttgcaattatggccccttttttgggacacgtggcgtcttctca 217  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||| ||||||| ||||||||||| |||||  |||||||    
T  4694 aaatatgctcttttgaccccttatctttacaaaaaagttgcgattttggcccc-tttttgggacaggtggcagcttctca 4616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 4943 - 4980
Alignment:
Q  209 gtcttctcagcaattttgggatgaaaggggccaaaatt 246  Q
    |||||||||||||||||||||||||||||| |||||||    
T  4943 gtcttctcagcaattttgggatgaaaggggtcaaaatt 4980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 22928 - 22983
Alignment:
Q  155 ccccttatctttacaaaa--agttgcaattatggccccttttttgggacacgtggc 208  Q
    |||||||||||| |||||  ||||||||||||||||| |||||||||||| |||||    
T  22928 ccccttatctttgcaaaaaaagttgcaattatggcccattttttgggacatgtggc 22983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 128518 - 128451
Alignment:
Q  149 ttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgtcttctca 217  Q
    ||||||||||||||||  | |||||||||| ||| || |||||||||||| |||||||||| |||||||    
T  128518 ttttgaccccttatctaca-aaaaagttgcgattttgaccccttttttggaacacgtggcggcttctca 128451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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