View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13029_high_16 (Length: 239)
Name: NF13029_high_16
Description: NF13029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13029_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 19478787 - 19478960
Alignment:
| Q |
51 |
atagaatctcgactacaagagaaagggtgtacttacactatttggtgttggttccaaaggattccatatgtatgaaaatcaattgttggatcaaaccaga |
150 |
Q |
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|||||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |
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| T |
19478787 |
atagaagctcgactccaagagaaaaggtgcacttacactatttggtgttggttccaaaggattccatatgtatgaaaatcgattgttggatcaaaccaaa |
19478886 |
T |
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| Q |
151 |
ggctatgcctttcttctcttcccccttcatcacttgcaaacacatttgtttgcaacgtataaggccctcctttg |
224 |
Q |
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|||||||||||| |||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||||||| |
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| T |
19478887 |
ggctatgcctttgttctctccccccttcatcactcgcaaacacgtttgtttgcaacgtatatggccctcctttg |
19478960 |
T |
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