View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1302_low_28 (Length: 306)
Name: NF1302_low_28
Description: NF1302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1302_low_28 |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 72 - 290
Target Start/End: Original strand, 36495090 - 36495308
Alignment:
| Q |
72 |
ccttttaccttatcggttacttcatctcttccaagaccgaactcctcaggttcgagtcacatactccagcatcttgatttgcgtctttcacggcttagcc |
171 |
Q |
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| T |
36495090 |
ccttttaccttatcggttacttcatctcttccaagaccgaactcctcaagttcgagtcacatactccagcatcttgatttgcgtctttcacggcttagcc |
36495189 |
T |
|
| Q |
172 |
gacaccaaccgtggcttatcagccgccaataataccttgcagaacatcgttcttgacttcagcatcccctacttcatcgccgatctgttacatttcgtcg |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36495190 |
gacaccaaccgtggcttatcagccgccaataataccttgcagaacatcgttcttgacttcagcatcccctacttcatcgccgatctgttacatttcgtca |
36495289 |
T |
|
| Q |
272 |
ttttcctcccaagctacgt |
290 |
Q |
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||||||||||||||||||| |
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| T |
36495290 |
ttttcctcccaagctacgt |
36495308 |
T |
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