View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13031_low_2 (Length: 366)

Name: NF13031_low_2
Description: NF13031
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13031_low_2
NF13031_low_2
[»] chr3 (56 HSPs)
chr3 (8-199)||(47729596-47729787)
chr3 (86-199)||(12998984-12999097)
chr3 (63-181)||(13554767-13554885)
chr3 (61-178)||(14738960-14739077)
chr3 (62-181)||(14738866-14738984)
chr3 (61-181)||(6957669-6957788)
chr3 (61-181)||(6971949-6972068)
chr3 (61-181)||(12702216-12702335)
chr3 (62-181)||(6957575-6957693)
chr3 (62-181)||(6971855-6971973)
chr3 (62-177)||(13554675-13554790)
chr3 (8-94)||(12998611-12998697)
chr3 (61-181)||(30021995-30022115)
chr3 (65-181)||(6957482-6957598)
chr3 (65-181)||(6971762-6971878)
chr3 (61-181)||(14738769-14738889)
chr3 (61-181)||(16470055-16470175)
chr3 (62-181)||(3676116-3676233)
chr3 (62-181)||(3685251-3685368)
chr3 (62-181)||(16470152-16470269)
chr3 (62-181)||(20435024-20435141)
chr3 (61-181)||(20435118-20435238)
chr3 (62-181)||(20448950-20449067)
chr3 (61-181)||(20449044-20449164)
chr3 (62-181)||(30021901-30022018)
chr3 (62-181)||(41432190-41432307)
chr3 (61-181)||(41432284-41432404)
chr3 (66-181)||(13848396-13848511)
chr3 (61-121)||(27873512-27873572)
chr3 (64-121)||(3676080-3676137)
chr3 (64-121)||(3685215-3685272)
chr3 (64-121)||(16470248-16470305)
chr3 (64-121)||(20434988-20435045)
chr3 (64-121)||(20448914-20448971)
chr3 (64-121)||(30021865-30021922)
chr3 (64-121)||(41432154-41432211)
chr3 (136-181)||(3676210-3676255)
chr3 (136-181)||(3685345-3685390)
chr3 (61-105)||(13554877-13554921)
chr3 (61-105)||(13602926-13602970)
chr3 (61-105)||(16016799-16016843)
chr3 (110-181)||(16016752-16016823)
chr3 (110-181)||(27873548-27873619)
chr3 (63-105)||(13602962-13603004)
chr3 (136-181)||(3675985-3676030)
chr3 (136-181)||(3685120-3685165)
chr3 (136-181)||(6957423-6957468)
chr3 (136-181)||(6971703-6971748)
chr3 (136-181)||(14738748-14738793)
chr3 (136-181)||(16470034-16470079)
chr3 (136-181)||(20435214-20435259)
chr3 (136-181)||(20449140-20449185)
chr3 (136-181)||(30022091-30022136)
chr3 (136-181)||(41432380-41432425)
chr3 (61-105)||(6957444-6957488)
chr3 (61-105)||(6971724-6971768)
[»] chr6 (38 HSPs)
chr6 (8-199)||(35024836-35025027)
chr6 (60-188)||(18868549-18868677)
chr6 (61-181)||(22402137-22402257)
chr6 (62-181)||(34270028-34270147)
chr6 (62-181)||(27642836-27642955)
chr6 (63-181)||(27643027-27643144)
chr6 (62-181)||(18868749-18868866)
chr6 (61-181)||(22402233-22402353)
chr6 (62-181)||(18868843-18868962)
chr6 (62-181)||(27642932-27643050)
chr6 (62-181)||(33252974-33253093)
chr6 (63-181)||(28268409-28268527)
chr6 (63-181)||(28347159-28347277)
chr6 (61-181)||(18868652-18868773)
chr6 (64-181)||(30115759-30115875)
chr6 (61-188)||(12392156-12392283)
chr6 (62-181)||(33252883-33252997)
chr6 (61-181)||(34270124-34270246)
chr6 (61-113)||(26845307-26845359)
chr6 (61-177)||(20074057-20074168)
chr6 (110-181)||(12392259-12392330)
chr6 (110-181)||(28268292-28268363)
chr6 (110-181)||(28347042-28347113)
chr6 (61-181)||(30115854-30115972)
chr6 (125-178)||(20074287-20074340)
chr6 (61-105)||(11055075-11055119)
chr6 (125-177)||(20074173-20074225)
chr6 (125-177)||(20074230-20074282)
chr6 (61-121)||(27643171-27643231)
chr6 (62-105)||(28268504-28268547)
chr6 (62-105)||(28347254-28347297)
chr6 (63-105)||(11055041-11055083)
chr6 (35-112)||(23110063-23110141)
chr6 (63-105)||(28268375-28268417)
chr6 (63-105)||(28347125-28347167)
chr6 (136-181)||(20074036-20074081)
chr6 (136-181)||(30115948-30115993)
chr6 (130-178)||(22598365-22598413)
[»] scaffold0005 (2 HSPs)
scaffold0005 (8-199)||(305103-305294)
scaffold0005 (8-197)||(297823-298012)
[»] chr2 (14 HSPs)
chr2 (8-195)||(15813447-15813634)
chr2 (62-181)||(21754520-21754639)
chr2 (63-181)||(21768666-21768784)
chr2 (62-184)||(19656249-19656371)
chr2 (63-181)||(21754426-21754543)
chr2 (62-181)||(21749941-21750058)
chr2 (61-188)||(22673125-22673252)
chr2 (63-181)||(21321486-21321602)
chr2 (61-181)||(21749844-21749964)
chr2 (64-121)||(21750037-21750094)
chr2 (61-121)||(21754339-21754399)
chr2 (61-121)||(21768494-21768554)
chr2 (63-121)||(21768581-21768639)
chr2 (136-181)||(21749823-21749868)
[»] chr8 (21 HSPs)
chr8 (61-181)||(22106439-22106559)
chr8 (63-181)||(6664317-6664435)
chr8 (62-181)||(23601729-23601848)
chr8 (63-181)||(6671987-6672105)
chr8 (63-181)||(14336646-14336764)
chr8 (62-188)||(14336741-14336867)
chr8 (62-177)||(23601825-23601940)
chr8 (61-181)||(20026988-20027109)
chr8 (66-178)||(22106574-22106686)
chr8 (63-181)||(15831194-15831312)
chr8 (61-188)||(31967814-31967941)
chr8 (61-180)||(12845960-12846076)
chr8 (110-181)||(25644131-25644202)
chr8 (63-130)||(15831387-15831454)
chr8 (63-113)||(15831296-15831346)
chr8 (64-121)||(20027088-20027145)
chr8 (123-181)||(20026954-20027012)
chr8 (61-165)||(16738048-16738150)
chr8 (61-105)||(6664427-6664471)
chr8 (61-105)||(6672097-6672141)
chr8 (109-181)||(31967767-31967838)
[»] chr4 (35 HSPs)
chr4 (61-181)||(40816253-40816373)
chr4 (65-181)||(737065-737181)
chr4 (62-181)||(40816350-40816469)
chr4 (63-181)||(36696064-36696182)
chr4 (61-181)||(3357788-3357908)
chr4 (61-181)||(3367454-3367574)
chr4 (65-181)||(3396918-3397034)
chr4 (62-181)||(3397011-3397130)
chr4 (62-193)||(40816542-40816673)
chr4 (61-181)||(40816445-40816565)
chr4 (61-181)||(55790216-55790336)
chr4 (61-188)||(49891152-49891279)
chr4 (62-181)||(3357694-3357811)
chr4 (62-181)||(3367360-3367477)
chr4 (61-181)||(22140712-22140832)
chr4 (61-181)||(22152626-22152746)
chr4 (63-179)||(25653172-25653288)
chr4 (63-181)||(36695903-36696018)
chr4 (62-181)||(22140809-22140927)
chr4 (62-181)||(22152723-22152841)
chr4 (61-188)||(55790031-55790159)
chr4 (62-121)||(55790180-55790239)
chr4 (64-121)||(3357658-3357715)
chr4 (64-121)||(3367324-3367381)
chr4 (97-181)||(3396820-3396904)
chr4 (97-181)||(737001-737085)
chr4 (62-105)||(36695995-36696038)
chr4 (110-181)||(25653123-25653194)
chr4 (136-181)||(3357884-3357929)
chr4 (136-181)||(3367550-3367595)
chr4 (136-181)||(22140691-22140736)
chr4 (136-181)||(22152605-22152650)
chr4 (136-181)||(55790312-55790357)
chr4 (61-105)||(3396880-3396924)
chr4 (63-103)||(36696030-36696070)
[»] chr5 (38 HSPs)
chr5 (62-181)||(37577056-37577175)
chr5 (62-181)||(37577152-37577271)
chr5 (62-181)||(37586168-37586287)
chr5 (62-181)||(37586264-37586383)
chr5 (61-178)||(36433002-36433119)
chr5 (63-181)||(360422-360540)
chr5 (63-181)||(345783-345901)
chr5 (65-170)||(21747271-21747376)
chr5 (63-184)||(29189579-29189700)
chr5 (62-177)||(345878-345993)
chr5 (62-177)||(360517-360632)
chr5 (62-181)||(34460571-34460689)
chr5 (62-181)||(34474828-34474946)
chr5 (61-177)||(13459911-13460027)
chr5 (61-181)||(13460003-13460123)
chr5 (61-181)||(37577248-37577368)
chr5 (61-181)||(37586360-37586480)
chr5 (61-181)||(34460666-34460786)
chr5 (61-181)||(34474923-34475043)
chr5 (80-181)||(36433095-36433195)
chr5 (62-181)||(24061232-24061346)
chr5 (91-178)||(36432650-36432737)
chr5 (61-113)||(36433196-36433248)
chr5 (110-181)||(29189712-29189783)
chr5 (61-105)||(345747-345791)
chr5 (61-105)||(360386-360430)
chr5 (130-181)||(21747206-21747257)
chr5 (139-181)||(24061213-24061255)
chr5 (62-103)||(24061323-24061364)
chr5 (136-181)||(24061430-24061475)
chr5 (136-181)||(34460762-34460807)
chr5 (136-181)||(34475019-34475064)
chr5 (136-181)||(36433224-36433269)
chr5 (136-181)||(37577344-37577389)
chr5 (136-181)||(37586456-37586501)
chr5 (109-181)||(13460099-13460171)
chr5 (61-105)||(21747233-21747277)
chr5 (65-105)||(29189692-29189732)
[»] scaffold0125 (6 HSPs)
scaffold0125 (61-178)||(16497-16614)
scaffold0125 (61-178)||(9575-9692)
scaffold0125 (62-181)||(15479-15598)
scaffold0125 (62-181)||(16399-16517)
scaffold0125 (62-181)||(9477-9595)
scaffold0125 (115-181)||(15575-15641)
[»] scaffold0014 (4 HSPs)
scaffold0014 (61-181)||(187392-187512)
scaffold0014 (73-181)||(177940-178048)
scaffold0014 (97-181)||(187332-187416)
scaffold0014 (97-181)||(177834-177918)
[»] chr7 (53 HSPs)
chr7 (65-181)||(12594770-12594886)
chr7 (61-181)||(16281129-16281249)
chr7 (61-181)||(16295331-16295451)
chr7 (62-181)||(3423207-3423326)
chr7 (61-181)||(4889919-4890038)
chr7 (62-188)||(12594667-12594793)
chr7 (61-179)||(17452988-17453106)
chr7 (61-179)||(17464165-17464283)
chr7 (61-179)||(17588931-17589049)
chr7 (62-179)||(7342680-7342797)
chr7 (61-181)||(3423110-3423230)
chr7 (61-181)||(23445042-23445162)
chr7 (62-177)||(16281226-16281341)
chr7 (62-177)||(16295428-16295543)
chr7 (62-181)||(17464259-17464378)
chr7 (62-181)||(17588836-17588955)
chr7 (61-178)||(4890014-4890132)
chr7 (61-181)||(23444946-23445066)
chr7 (61-181)||(792671-792789)
chr7 (61-181)||(808454-808572)
chr7 (61-181)||(26124817-26124935)
chr7 (61-181)||(7342583-7342703)
chr7 (62-181)||(3423303-3423420)
chr7 (62-181)||(16264563-16264680)
chr7 (61-181)||(16272132-16272252)
chr7 (61-188)||(12606818-12606945)
chr7 (80-181)||(17452911-17453012)
chr7 (62-181)||(16272229-16272346)
chr7 (61-181)||(17464355-17464480)
chr7 (61-181)||(17588734-17588859)
chr7 (61-181)||(16264466-16264586)
chr7 (63-181)||(17452759-17452882)
chr7 (64-121)||(3423399-3423456)
chr7 (64-121)||(16264659-16264716)
chr7 (64-121)||(16272325-16272382)
chr7 (64-121)||(26124781-26124838)
chr7 (97-181)||(12594900-12594984)
chr7 (61-165)||(37287249-37287353)
chr7 (62-113)||(17452859-17452910)
chr7 (110-181)||(23445138-23445209)
chr7 (64-121)||(792768-792825)
chr7 (64-121)||(808551-808608)
chr7 (97-181)||(37287173-37287255)
chr7 (61-105)||(17452723-17452767)
chr7 (14-103)||(19352390-19352480)
chr7 (136-181)||(792650-792695)
chr7 (136-181)||(808433-808478)
chr7 (136-181)||(3423089-3423134)
chr7 (136-181)||(4889898-4889943)
chr7 (136-181)||(16264445-16264490)
chr7 (136-181)||(16272111-16272156)
chr7 (136-181)||(37287329-37287374)
chr7 (61-105)||(12594880-12594924)
[»] scaffold0016 (4 HSPs)
scaffold0016 (63-181)||(57177-57295)
scaffold0016 (97-181)||(57115-57199)
scaffold0016 (64-127)||(57274-57337)
scaffold0016 (77-121)||(57382-57426)
[»] chr1 (10 HSPs)
chr1 (61-181)||(2686062-2686182)
chr1 (61-181)||(49933649-49933769)
chr1 (66-181)||(2685968-2686081)
chr1 (64-181)||(20312911-20313025)
chr1 (97-181)||(20312678-20312762)
chr1 (64-114)||(2685939-2685989)
chr1 (63-121)||(20312825-20312883)
chr1 (62-121)||(20312739-20312798)
chr1 (136-181)||(2686158-2686203)
chr1 (136-181)||(20312887-20312932)
[»] scaffold0031 (3 HSPs)
scaffold0031 (63-181)||(2599-2717)
scaffold0031 (65-154)||(1093-1182)
scaffold0031 (110-181)||(2550-2621)
[»] scaffold0007 (3 HSPs)
scaffold0007 (63-181)||(62546-62668)
scaffold0007 (98-181)||(62680-62763)
scaffold0007 (62-105)||(62660-62703)
[»] scaffold0560 (2 HSPs)
scaffold0560 (61-188)||(10044-10171)
scaffold0560 (110-181)||(10147-10218)
[»] scaffold0278 (2 HSPs)
scaffold0278 (85-181)||(14656-14752)
scaffold0278 (85-181)||(17990-18086)
[»] scaffold0023 (1 HSPs)
scaffold0023 (63-148)||(145992-146077)
[»] scaffold0051 (2 HSPs)
scaffold0051 (61-105)||(57469-57513)
scaffold0051 (63-105)||(57505-57547)
[»] scaffold0098 (1 HSPs)
scaffold0098 (97-178)||(28269-28347)


Alignment Details
Target: chr3 (Bit Score: 180; Significance: 4e-97; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 8 - 199
Target Start/End: Complemental strand, 47729787 - 47729596
Alignment:
Q  8 agattattctggagagtgatttaacttaattgcaagctaatattaagatttggttaggaccagagcactctagatttatttaattaataaggaccagatt 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  47729787 agattattctggagagtgatttaacttaattgcaagctaatattaagatttgattaggaccagagcactctggatttatttaattaataaggaccagatt 47729688  T
Q  108 gttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaagatgtgtgtatttaatgt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47729687 gttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccagagcactctggattaagatgtgtgtatttaatgt 47729596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 12998984 - 12999097
Alignment:
Q  86 tttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaagatg 185  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| | ||||| || ||||||||| |||||||||    
T  12998984 tttaattaataaggaccagattgttctggagaataaataaattaaacaacaatataatatttaaagttaatttaggatcagagcactctgaattaagatg 12999083  T
Q  186 tgtgtatttaatgt 199  Q
    ||||||||||||||    
T  12999084 tgtgtatttaatgt 12999097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 13554885 - 13554767
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagga 162  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||  ||||||||| || ||||||||||||| ||||| |||||||    
T  13554885 aggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaatatttaaattaaacaaaaatataatattaacagttaatatagga 13554786  T
Q  163 ccaaagcactctggattaa 181  Q
    ||| |||||||||||||||    
T  13554785 ccagagcactctggattaa 13554767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 61 - 178
Target Start/End: Original strand, 14738960 - 14739077
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||| | ||||||| ||||||||| || ||||||||||||| ||||| |||||    
T  14738960 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttccggagaataattaaattaaacaaaaatataatattaacagttaatatag 14739059  T
Q  161 gaccaaagcactctggat 178  Q
    ||||| ||||||||||||    
T  14739060 gaccagagcactctggat 14739077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 14738866 - 14738984
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| | ||||    
T  14738866 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaacagttaat-tagg 14738964  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  14738965 accagagcactctggattaa 14738984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 6957669 - 6957788
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| || || | |||    
T  6957669 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaaacaagaatataatattaacaggtaat-tag 6957767  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  6957768 gaccagagcactctggattaa 6957788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 6971949 - 6972068
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| || || | |||    
T  6971949 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaaacaagaatataatattaacaggtaat-tag 6972047  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  6972048 gaccagagcactctggattaa 6972068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 12702335 - 12702216
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| ||  |||||||||||| || || |||||    
T  12702335 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaggatataatattaacag-taatatag 12702237  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  12702236 gaccagagcactctggattaa 12702216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 6957575 - 6957693
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| || || | ||||    
T  6957575 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaaacaagaatataatattaacaggtaat-tagg 6957673  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  6957674 accagagcactctggattaa 6957693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 6971855 - 6971973
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| || || | ||||    
T  6971855 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaaacaagaatataatattaacaggtaat-tagg 6971953  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  6971954 accagagcactctggattaa 6971973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 177
Target Start/End: Complemental strand, 13554790 - 13554675
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || |||| |||||||| ||||| | ||||    
T  13554790 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaataaaatattaacagttaatttagg 13554691  T
Q  162 accaaagcactctgga 177  Q
    |||| |||||||||||    
T  13554690 accagagcactctgga 13554675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 12998611 - 12998697
Alignment:
Q  8 agattattctggagagtgatttaacttaattgcaagctaatattaagatttggttaggaccagagcactctagatttatttaattaa 94  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | || | |||||||||||||||    
T  12998611 agattattctggagagtgatttaactttattgcaagctaatattaagatttggttaggaccagaacgctttggatttatttaattaa 12998697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 30022115 - 30021995
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| ||||||||||||| |||||||    |||| ||||||| ||||||||| || ||||||||||||| ||||| |||||    
T  30022115 ttaggaccagagcactctggattaatttaattaataatgaccagagcactctggagaataattaaattaaacaaaaatataatattaatagttaatatag 30022016  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  30022015 gaccagagcactctggattaa 30021995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 65 - 181
Target Start/End: Original strand, 6957482 - 6957598
Alignment:
Q  65 gaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggacc 164  Q
    |||||||||||||| |||| |||||||||| ||||||||||    |||| ||||||| ||||||||| || ||||||||||||| ||||| |||||||||    
T  6957482 gaccagagcactctggattaatttaattaacaaggaccagagcactctggagaataattaaattaaacaaaaatataatattaatagttaatataggacc 6957581  T
Q  165 aaagcactctggattaa 181  Q
    | |||||||||||||||    
T  6957582 agagcactctggattaa 6957598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 65 - 181
Target Start/End: Original strand, 6971762 - 6971878
Alignment:
Q  65 gaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggacc 164  Q
    |||||||||||||| |||| |||||||||| ||||||||||    |||| ||||||| ||||||||| || ||||||||||||| ||||| |||||||||    
T  6971762 gaccagagcactctggattaatttaattaacaaggaccagagcactctggagaataattaaattaaacaaaaatataatattaatagttaatataggacc 6971861  T
Q  165 aaagcactctggattaa 181  Q
    | |||||||||||||||    
T  6971862 agagcactctggattaa 6971878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 14738769 - 14738889
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||| ||||||| ||||||||| || ||||||||||||| ||||| |||||    
T  14738769 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataattaaattaaacaaaaatataatattaacagttaatatag 14738868  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  14738869 gaccagagcactctggattaa 14738889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 16470055 - 16470175
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||| ||||||| ||||||||| || ||||||||||||| ||||| |||||    
T  16470055 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataattaaattaaacaaaaatataatattaatagttaatatag 16470154  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  16470155 gaccagagcactctggattaa 16470175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 3676233 - 3676116
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || ||||| |||||  |||||| | | ||    
T  3676233 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaagcaagaatatcatatt--aagttaattttgg 3676136  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  3676135 accagagcactctggattaa 3676116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 3685368 - 3685251
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || ||||| |||||  |||||| | | ||    
T  3685368 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaagcaagaatatcatatt--aagttaattttgg 3685271  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  3685270 accagagcactctggattaa 3685251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 16470152 - 16470269
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || ||||| |||||  |||||| | | ||    
T  16470152 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaagcaagaatatcatatt--aagttaattttgg 16470249  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  16470250 accagagcactctggattaa 16470269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 20435141 - 20435024
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || ||||| |||||  |||||| | | ||    
T  20435141 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaagcaagaatatcatatt--aagttaattttgg 20435044  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  20435043 accagagcactctggattaa 20435024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 20435238 - 20435118
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||| ||||||| ||| ||||| || ||||||||||||| ||||| |||||    
T  20435238 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataattaatttaaacaaaaatataatattaatagttaatatag 20435139  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  20435138 gaccagagcactctggattaa 20435118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 20449067 - 20448950
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || ||||| |||||  |||||| | | ||    
T  20449067 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaagcaagaatatcatatt--aagttaattttgg 20448970  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  20448969 accagagcactctggattaa 20448950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 20449164 - 20449044
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||| ||||||| ||| ||||| || ||||||||||||| ||||| |||||    
T  20449164 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataattaatttaaacaaaaatataatattaatagttaatatag 20449065  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  20449064 gaccagagcactctggattaa 20449044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 30022018 - 30021901
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || ||||| |||||  |||||| | | ||    
T  30022018 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaagcaagaatatcatatt--aagttaattttgg 30021921  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  30021920 accagagcactctggattaa 30021901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 41432307 - 41432190
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || ||||| |||||  |||||| | | ||    
T  41432307 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaagcaagaatatcatatt--aagttaattttgg 41432210  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  41432209 accagagcactctggattaa 41432190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 41432404 - 41432284
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||| ||||||| ||| ||||| || ||||||||||||| ||||| |||||    
T  41432404 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataattaatttaaacaaaaatataatattaatagttaatatag 41432305  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  41432304 gaccagagcactctggattaa 41432284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 13848396 - 13848511
Alignment:
Q  66 accagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggacca 165  Q
    ||||||||||||| |||| |||||||||| |  ||||| ||||||||| ||||||| ||||||||| || ||||||||||||| | |||   ||||||||    
T  13848396 accagagcactctggattaatttaattaacagagaccatattgttctggagaataattaaattaaacaataatataatattaacaattaacttaggacca 13848495  T
Q  166 aagcactctggattaa 181  Q
     |||||||||||||||    
T  13848496 gagcactctggattaa 13848511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 121
Target Start/End: Complemental strand, 27873572 - 27873512
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||||    
T  27873572 ttaggaccagagcactctggattaatttaattaacaaggaccagattgctctgcagaataa 27873512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 3676137 - 3676080
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||    
T  3676137 ggaccagagcactctggattaatttaattattaaggaccagattgttctggagaataa 3676080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 3685272 - 3685215
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||    
T  3685272 ggaccagagcactctggattaatttaattattaaggaccagattgttctggagaataa 3685215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 16470248 - 16470305
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||    
T  16470248 ggaccagagcactctggattaatttaattattaaggaccagattgttctggagaataa 16470305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 20435045 - 20434988
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||    
T  20435045 ggaccagagcactctggattaatttaattattaaggaccagattgttctggagaataa 20434988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 20448971 - 20448914
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||    
T  20448971 ggaccagagcactctggattaatttaattattaaggaccagattgttctggagaataa 20448914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 30021922 - 30021865
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||    
T  30021922 ggaccagagcactctggattaatttaattattaaggaccagattgttctggagaataa 30021865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 41432211 - 41432154
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||    
T  41432211 ggaccagagcactctggattaatttaattattaaggaccagattgttctggagaataa 41432154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 3676255 - 3676210
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| |||||||||| |||||||||||||||    
T  3676255 aatataatattaatagttaatataggaccagagcactctggattaa 3676210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 3685390 - 3685345
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| |||||||||| |||||||||||||||    
T  3685390 aatataatattaatagttaatataggaccagagcactctggattaa 3685345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 13554921 - 13554877
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||    
T  13554921 ttaggaccagagcactctggattaatttaattaacaaggaccaga 13554877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 13602926 - 13602970
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||    
T  13602926 ttaggaccagagcactctggattaatttaattaacaaggaccaga 13602970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 16016799 - 16016843
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||    
T  16016799 ttaggaccagagcactctggattaatttaattaacaaggaccaga 16016843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 16016752 - 16016823
Alignment:
Q  110 tctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    |||| ||||| | ||||||||| || || |||||||||| ||||| | |||||||| |||||||||||||||    
T  16016752 tctggagaatgattaaattaaacaaaaagataatattaacagttaatttaggaccagagcactctggattaa 16016823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 27873619 - 27873548
Alignment:
Q  110 tctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    |||| ||||| | ||||||||| || || |||||||||| ||||| | |||||||| |||||||||||||||    
T  27873619 tctggagaatgattaaattaaacaaaaaaataatattaacagttaatttaggaccagagcactctggattaa 27873548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 13602962 - 13603004
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||| |||| |||||||||| ||||||||||    
T  13602962 aggaccagagcactctggattaatttaattaagaaggaccaga 13603004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 3676030 - 3675985
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  3676030 aatataatattaacagttaatttaggaccagagcactctggattaa 3675985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 3685165 - 3685120
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  3685165 aatataatattaacagttaatttaggaccagagcactctggattaa 3685120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 6957423 - 6957468
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  6957423 aatataatattaacagttactttaggaccagagcactctggattaa 6957468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 6971703 - 6971748
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  6971703 aatataatattaacagttactttaggaccagagcactctggattaa 6971748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 14738748 - 14738793
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  14738748 aatataatattaacagttaatttaggaccagagcactctggattaa 14738793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 16470034 - 16470079
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  16470034 aatataatattaacagttaatttaggaccagagcactctggattaa 16470079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 20435259 - 20435214
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  20435259 aatataatattaacagttaatttaggaccagagcactctggattaa 20435214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 20449185 - 20449140
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  20449185 aatataatattaacagttaatttaggaccagagcactctggattaa 20449140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 30022136 - 30022091
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  30022136 aatataatattaacagttactttaggaccagagcactctggattaa 30022091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 41432425 - 41432380
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  41432425 aatataatattaacagttaatttaggaccagagcactctggattaa 41432380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 6957444 - 6957488
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    
T  6957444 ttaggaccagagcactctggattaatttaattaacaatgaccaga 6957488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 6971724 - 6971768
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    
T  6971724 ttaggaccagagcactctggattaatttaattaacaatgaccaga 6971768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 160; Significance: 3e-85; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 8 - 199
Target Start/End: Complemental strand, 35025027 - 35024836
Alignment:
Q  8 agattattctggagagtgatttaacttaattgcaagctaatattaagatttggttaggaccagagcactctagatttatttaattaataaggaccagatt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||    
T  35025027 agattattctggagagtgatttaacttaattgcaagctaatattaagatttggttaggaccagagtactctggatttatttaattaataaggaccatatt 35024928  T
Q  108 gttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaagatgtgtgtatttaatgt 199  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||    
T  35024927 gttctggagaataaataaattaaacaacaatataatattaaaagttagtttaagaccagagcactctggattaagatgtgtgtatttaatgt 35024836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 60 - 188
Target Start/End: Complemental strand, 18868677 - 18868549
Alignment:
Q  60 gttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtata 159  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||||||| || |||| ||||||||| || ||||||||||||| ||||| ||||    
T  18868677 gttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggaggataattaaattaaacaaaaatataatattaacagttaatata 18868578  T
Q  160 ggaccaaagcactctggattaagatgtgt 188  Q
    |||||| ||||||||||||| || |||||    
T  18868577 ggaccagagcactctggattgaggtgtgt 18868549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 22402257 - 22402137
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| | |||    
T  22402257 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaagaatataatattaacagttaatttag 22402158  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  22402157 gaccagagcactctggattaa 22402137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 34270147 - 34270028
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| |  ||||||||||||| ||||| ||||||    
T  34270147 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacataaatataatattaacagttaatatagg 34270048  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  34270047 accagagcactctggattaa 34270028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 27642955 - 27642836
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    |||||| |||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| ||||||    
T  27642955 taggacaagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaatagttaatatagg 27642856  T
Q  162 accaaagcactctggattaa 181  Q
    |||| || ||||||||||||    
T  27642855 accagagtactctggattaa 27642836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 27643144 - 27643027
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagga 162  Q
    |||||||||||||||| |||| |||||||||| | |||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| |||||||    
T  27643144 aggaccagagcactctggattaatttaattaacagggaccagattgttctggagaataattaaattaaacaa-aatataatattaacagttaatatagga 27643046  T
Q  163 ccaaagcactctggattaa 181  Q
    ||| |||||||||||||||    
T  27643045 ccagagcactctggattaa 27643027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 18868866 - 18868749
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || ||||||||||||| || || | ||||    
T  18868866 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaa--aaaaatataatattaacagctaatttagg 18868769  T
Q  162 accaaagcactctggattaa 181  Q
    ||||||||||||||||||||    
T  18868768 accaaagcactctggattaa 18868749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 22402353 - 22402233
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    ||||||||||||||||||  ||| |||||||||| ||||||||| |||||||| ||||||| ||||||||| || ||||||||||||| ||||| | |||    
T  22402353 ttaggaccagagcactctgaattaatttaattaacaaggaccaggttgttctggagaataattaaattaaacaagaatataatattaacagttaatttag 22402254  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  22402253 gaccagagcactctggattaa 22402233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 18868962 - 18868843
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    |||||| ||| |||||| |||| |||||||||| |||||||||||||||||| || |||| ||||||||| || ||||||||||||| ||||| ||||||    
T  18868962 taggactagaacactctggattaatttaattaacaaggaccagattgttctggaggataattaaattaaacaaaaatataatattaacagttaatatagg 18868863  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  18868862 accagagcactctggattaa 18868843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 27643050 - 27642932
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| | |||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| ||||||    
T  27643050 taggaccagagcactctggattaatttaattaacagggaccagattgttctggagaataattaaattaaa-aaaaatataatattaatagttaatatagg 27642952  T
Q  162 accaaagcactctggattaa 181  Q
    || | |||||||||||||||    
T  27642951 acaagagcactctggattaa 27642932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 33253093 - 33252974
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    |||||||||| |||||| |||| |||||||||| |||||||||||| ||||| ||||||| ||||||||| || ||||||||||||| ||||| ||||||    
T  33253093 taggaccagaacactctggattaatttaattaacaaggaccagattattctggagaataattaaattaaacaaaaatataatattaacagttaatatagg 33252994  T
Q  162 accaaagcactctggattaa 181  Q
    |||| ||||||||| |||||    
T  33252993 accagagcactctgaattaa 33252974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 28268409 - 28268527
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagga 162  Q
    |||||||||  ||||| |||| |||||||||| ||||||||||| |||||| ||||||| ||||||||| |  ||||||||||||| ||||| |||||||    
T  28268409 aggaccagaatactctggattaatttaattaacaaggaccagatcgttctggagaataattaaattaaacataaatataatattaacagttaatatagga 28268508  T
Q  163 ccaaagcactctggattaa 181  Q
    ||| |||||||||||||||    
T  28268509 ccagagcactctggattaa 28268527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 28347159 - 28347277
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagga 162  Q
    |||||||||  ||||| |||| |||||||||| ||||||||||| |||||| ||||||| ||||||||| |  ||||||||||||| ||||| |||||||    
T  28347159 aggaccagaatactctggattaatttaattaacaaggaccagatcgttctggagaataattaaattaaacataaatataatattaacagttaatatagga 28347258  T
Q  163 ccaaagcactctggattaa 181  Q
    ||| |||||||||||||||    
T  28347259 ccagagcactctggattaa 28347277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 18868773 - 18868652
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaa-taacaatataatattaaaagttagtata 159  Q
    ||||||||| |||||||| |||| |||||||||| |||||||||||||||||| ||||||| |||||||||  || ||||||||||||| |||||   ||    
T  18868773 ttaggaccaaagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaaatataatattaacagttaagtta 18868674  T
Q  160 ggaccaaagcactctggattaa 181  Q
    |||||| |||||||||||||||    
T  18868673 ggaccagagcactctggattaa 18868652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 64 - 181
Target Start/End: Complemental strand, 30115875 - 30115759
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggac 163  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| |||||| || || ||||||||||||| || || | ||||||    
T  30115875 ggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattgaacaagaatataatattaacaggtaat-taggac 30115777  T
Q  164 caaagcactctggattaa 181  Q
    || |||||||||||||||    
T  30115776 cagagcactctggattaa 30115759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 61 - 188
Target Start/End: Complemental strand, 12392283 - 12392156
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| | |||||||||||||||| ||||||| ||||||||| || |||||||||| || ||||| | |||    
T  12392283 ttaggaccagagcactctggattaatttaattaacagggaccagattgttctggagaataattaaattaaacaaaaatataatatcaacagttaatttag 12392184  T
Q  161 gaccaaagcactctggattaagatgtgt 188  Q
    ||||| ||| |||| |||| || |||||    
T  12392183 gaccagagcgctcttgattgaggtgtgt 12392156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 33252997 - 33252883
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    |||||||||||||||||  ||| |||||||||| || ||||||||||||||| ||||||| ||||||||| |     |||||||||| ||||||| ||||    
T  33252997 taggaccagagcactctgaattaatttaattaacaaagaccagattgttctggagaataattaaattaaaca-----ataatattaatagttagtttagg 33252903  T
Q  162 accaaagcactctggattaa 181  Q
     ||| |||||||||||||||    
T  33252902 tccagagcactctggattaa 33252883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 34270246 - 34270124
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaa--tataatattaaaagttagtat 158  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||| ||||||| ||||||||| || ||  ||||||||||| ||||| |||    
T  34270246 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataattaaattaaacaaaaaaatataatattaatagttaatat 34270147  T
Q  159 aggaccaaagcactctggattaa 181  Q
    ||||||| |||||||||||||||    
T  34270146 aggaccagagcactctggattaa 34270124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 26845307 - 26845359
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctg 113  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  26845307 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctg 26845359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 20074057 - 20074168
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    | || |||||||     ||||| || ||||||||||||| ||||| |||||    
T  20074057 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactatggagaataa-----ttaaacaaaaatataatattaacagttaatatag 20074151  T
Q  161 gaccaaagcactctgga 177  Q
    ||||| |||||||||||    
T  20074152 gaccagagcactctgga 20074168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 12392330 - 12392259
Alignment:
Q  110 tctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    |||| ||||| | ||||||||| || ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  12392330 tctggagaatgattaaattaaacaaaaatataatattaacagttaatttaggaccagagcactctggattaa 12392259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 28268292 - 28268363
Alignment:
Q  110 tctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    |||| ||||| | ||||||||| || ||||||||||||| ||||| |||| ||||| |||||||||||||||    
T  28268292 tctggagaatgattaaattaaacaaaaatataatattaacagttaatataagaccagagcactctggattaa 28268363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 28347042 - 28347113
Alignment:
Q  110 tctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    |||| ||||| | ||||||||| || ||||||||||||| ||||| |||| ||||| |||||||||||||||    
T  28347042 tctggagaatgattaaattaaacaaaaatataatattaacagttaatataagaccagagcactctggattaa 28347113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 30115972 - 30115854
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaata-aattaaataacaatataatattaaaagttagtata 159  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||| ||||||| || |||||   || ||||||||||||| ||||| | |     
T  30115972 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataattataatta---aaaaatataatattaacagttaatttt 30115876  T
Q  160 ggaccaaagcactctggattaa 181  Q
    |||||| |||||||||||||||    
T  30115875 ggaccagagcactctggattaa 30115854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 20074287 - 20074340
Alignment:
Q  125 aattaaataacaatataatattaaaagttagtataggaccaaagcactctggat 178  Q
    ||||||| || ||||||||||||| ||||| |||||||||| ||||||||||||    
T  20074287 aattaaacaaaaatataatattaacagttaatataggaccagagcactctggat 20074340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 11055119 - 11055075
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||    
T  11055119 ttaggaccagagcactctggattaatttaattaacaaggaccaga 11055075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 20074173 - 20074225
Alignment:
Q  125 aattaaataacaatataatattaaaagttagtataggaccaaagcactctgga 177  Q
    |||||||||| ||||||||||||| ||||| |||||||||| |||||| ||||    
T  20074173 aattaaataaaaatataatattaacagttaatataggaccagagcactatgga 20074225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 20074230 - 20074282
Alignment:
Q  125 aattaaataacaatataatattaaaagttagtataggaccaaagcactctgga 177  Q
    ||||||| || ||||||||||||| ||||| |||||||||| |||||||||||    
T  20074230 aattaaacaaaaatataatattaacagttaatataggaccagagcactctgga 20074282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 121
Target Start/End: Complemental strand, 27643231 - 27643171
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||| |||||||||| |||| | |||||||| |||||||||||| ||||| |||||||    
T  27643231 ttaggactagagcactctggattaaattaattaacaaggaccagattattctggagaataa 27643171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 28268504 - 28268547
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||    
T  28268504 taggaccagagcactctggattaatttaattaacaaggaccaga 28268547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 28347254 - 28347297
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||    
T  28347254 taggaccagagcactctggattaatttaattaacaaggaccaga 28347297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 11055083 - 11055041
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||| |||| |||||||||| ||||||||||    
T  11055083 aggaccagagcactctggattaatttaattaagaaggaccaga 11055041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 23110063 - 23110141
Alignment:
Q  35 aattgcaagctaatattaa-gatttggttaggaccagagcactctagatttatttaattaataaggaccagattgttct 112  Q
    ||||||||| ||||||||| ||||   |||||| ||||||| ||| |||| ||||||||||||||||||| ||| ||||    
T  23110063 aattgcaagataatattaaagattaatttaggaacagagcattctggattaatttaattaataaggaccaaattattct 23110141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 28268375 - 28268417
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||| |||| |||||||||| ||||||||||    
T  28268375 aggaccagagcactctggattaatttaattaacaaggaccaga 28268417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 28347125 - 28347167
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||| |||| |||||||||| ||||||||||    
T  28347125 aggaccagagcactctggattaatttaattaacaaggaccaga 28347167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 20074036 - 20074081
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  20074036 aatataatattaacagttactttaggaccagagcactctggattaa 20074081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 30115993 - 30115948
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  30115993 aatataatattaatagttactttaggaccagagcactctggattaa 30115948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 178
Target Start/End: Original strand, 22598365 - 22598413
Alignment:
Q  130 aataacaatataatattaaaagttagtataggaccaaagcactctggat 178  Q
    ||||| ||||||||||||| |||||   |||||||||||||||||||||    
T  22598365 aataaaaatataatattaacagttaacttaggaccaaagcactctggat 22598413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 148; Significance: 5e-78; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 8 - 199
Target Start/End: Complemental strand, 305294 - 305103
Alignment:
Q  8 agattattctggagagtgatttaacttaattgcaagctaatattaagatttggttaggaccagagcactctagatttatttaattaataaggaccagatt 107  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||| ||||||| |||||||||||||||    
T  305294 agattattctggagtgtgatttaacttaattgtaagctaatattaagatttggttaggactagagcactctggattaatttaatcaataaggaccagatt 305195  T
Q  108 gttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaagatgtgtgtatttaatgt 199  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||    
T  305194 gttctggagaataaataaattaaacaacaatataatattaaaagttagttttggaccagagcactctggattaagatgtgtgtatttaatgt 305103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 8 - 197
Target Start/End: Complemental strand, 298012 - 297823
Alignment:
Q  8 agattattctggagagtgatttaacttaattgcaagctaatattaagatttggttaggaccagagcactctagatttatttaattaataaggaccagatt 107  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||    
T  298012 agattattctggagagtgatttaacttaattctaagctaatattaagatttggttaggaccagagcactctggattaatttaattaataaggaccatatt 297913  T
Q  108 gttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaagatgtgtgtatttaat 197  Q
     ||| | ||||||||||||||||| |||||||||||||||||||||||| |||||||| | |||||||||||||||| ||||||||||||    
T  297912 attccggagaataaataaattaaacaacaatataatattaaaagttagtttaggaccacaacactctggattaagatatgtgtatttaat 297823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 140; Significance: 3e-73; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 8 - 195
Target Start/End: Original strand, 15813447 - 15813634
Alignment:
Q  8 agattattctggagagtgatttaacttaattgcaagctaatattaagatttggttaggaccagagcactctagatttatttaattaataaggaccagatt 107  Q
    ||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||| |||    
T  15813447 agattattctgaagagtgatttaacttaattgtaagttaatattaagatttggttaggaccagagcactctggattaattgaattaataaggaccaaatt 15813546  T
Q  108 gttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaagatgtgtgtattta 195  Q
    ||| || ||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  15813547 gttatggagaataaataaattaaacaacaatataatattaaaagttagtttaggaccagagcactctggattaagatgtgtgtattta 15813634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 21754520 - 21754639
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| ||||||    
T  21754520 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaatagttaatatagg 21754619  T
Q  162 accaaagcactctggattaa 181  Q
    |||| || ||||| ||||||    
T  21754620 accagagtactctagattaa 21754639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 21768666 - 21768784
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagga 162  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| ||||||     
T  21768666 aggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaatagttaatataggg 21768765  T
Q  163 ccaaagcactctggattaa 181  Q
    ||| || ||||||||||||    
T  21768766 ccagagtactctggattaa 21768784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 19656249 - 19656371
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    |||||||||| ||||||||| | |||||||||| |||||||||||| ||||| ||||||| ||||||||| || ||||||||||||| || || ||||||    
T  19656249 taggaccagaacactctagagtaatttaattaacaaggaccagattattctggagaataattaaattaaacaaaaatataatattaacaggtaatatagg 19656348  T
Q  162 accaaagcactctggattaagat 184  Q
    |||| ||||||||||||| ||||    
T  19656349 accagagcactctggattgagat 19656371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 21754426 - 21754543
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagga 162  Q
    |||||||||||||||| |||| |||||||||| | |||||||||||||||| ||||||| | ||||||| || ||||||||||||| ||||| |||||||    
T  21754426 aggaccagagcactctggattaatttaattaacagggaccagattgttctggagaataattgaattaaacaa-aatataatattaacagttaatatagga 21754524  T
Q  163 ccaaagcactctggattaa 181  Q
    ||| |||||||||||||||    
T  21754525 ccagagcactctggattaa 21754543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 21749941 - 21750058
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||| ||||| ||||||| ||||||||  || |||||||||||  |||||| | | ||    
T  21749941 taggaccagagcactctggattaatttaattaacaaggaccagattattctggagaataactaaattaagcaagaatataatatt--aagttaattttgg 21750038  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  21750039 accagagcactctggattaa 21750058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 61 - 188
Target Start/End: Original strand, 22673125 - 22673252
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    ||||||||||| |||||| |||  |||||||||| |||||||| ||||||||| ||||||| ||||||||| || ||||||||||||| | ||| |  ||    
T  22673125 ttaggaccagaacactctggatcaatttaattaacaaggaccatattgttctggagaataattaaattaaacaagaatataatattaacaattaattaag 22673224  T
Q  161 gaccaaagcactctggattaagatgtgt 188  Q
    ||||| ||||||||||||| | ||||||    
T  22673225 gaccagagcactctggattgatatgtgt 22673252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 21321486 - 21321602
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa-ataaattaaataacaatataatattaaaagttagtatagg 161  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||||||| |||||||  ||||||||  || || ||||| | || ||||| ||||||    
T  21321486 aggaccagagcactctggattaatttaattaagaaggaccagattgttctggagaataatttaaattaa--aagaa-ataatgtgaacagttaatatagg 21321582  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  21321583 accagagcactctggattaa 21321602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 21749844 - 21749964
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| ||  ||||||    |||| ||||||| ||| ||||| |  ||||||||||||  ||||| |||||    
T  21749844 ttaggaccagagcactctggattaatttaattaacaataaccagagcactctggagaataattaatttaaacagaaatataatattagtagttaatatag 21749943  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  21749944 gaccagagcactctggattaa 21749964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 21750037 - 21750094
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||    
T  21750037 ggaccagagcactctggattaatttaattattaaggaccagattgttctggagaataa 21750094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 21754339 - 21754399
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    |||||||||||||||||| |||| | |||||||| |||||||||||| ||||| |||||||    
T  21754339 ttaggaccagagcactctggattaaattaattaacaaggaccagattattctggagaataa 21754399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 21768494 - 21768554
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    |||||||||||||||||| |||| | |||||||| |||||||||||| ||||| |||||||    
T  21768494 ttaggaccagagcactctggattaaattaattaacaaggaccagattattctggagaataa 21768554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 21768581 - 21768639
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    |||||||||||||||| |||| |||||||||| | ||||||||||  |||| |||||||    
T  21768581 aggaccagagcactctggattaatttaattaacagggaccagattactctggagaataa 21768639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 21749823 - 21749868
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  21749823 aatataatattaacagttaatttaggaccagagcactctggattaa 21749868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 5e-38; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 22106439 - 22106559
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| |||||    
T  22106439 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaacagttaatatag 22106538  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  22106539 gaccagagcactctggattaa 22106559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 6664435 - 6664317
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagga 162  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||  ||||||||| || ||||||||||||| ||||| |||||||    
T  6664435 aggaccagagcactctggattaatttaattaataaggaccagattgttctggagaatatttaaattaaacaaaaatataatattaacagttaatatagga 6664336  T
Q  163 ccaaagcactctggattaa 181  Q
    ||| |||||||||||||||    
T  6664335 ccagagcactctggattaa 6664317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 23601729 - 23601848
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||  ||||||||| || ||||||||||||| ||||| ||||||    
T  23601729 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaatatttaaattaaacaaaaatataatattaacagttaatatagg 23601828  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  23601829 accagagcactctggattaa 23601848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 6672105 - 6671987
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagga 162  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||  ||||||||| || ||||||||||||| ||||| |||||||    
T  6672105 aggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaatatttaaattaaacaaaaatataatattaacagttaatatagga 6672006  T
Q  163 ccaaagcactctggattaa 181  Q
    ||| |||||||||||||||    
T  6672005 ccagagcactctggattaa 6671987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 14336646 - 14336764
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagga 162  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||  ||||||||| || ||||||||||||| ||||| |||||||    
T  14336646 aggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaatatttaaattaaacaaaaatataatattaacagttaatatagga 14336745  T
Q  163 ccaaagcactctggattaa 181  Q
    ||| |||||||||||||||    
T  14336746 ccagagcactctggattaa 14336764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 62 - 188
Target Start/End: Original strand, 14336741 - 14336867
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || |||| |||||||| ||||| | ||||    
T  14336741 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaataaaatattaacagttaatttagg 14336840  T
Q  162 accaaagcactctggattaagatgtgt 188  Q
    |||| ||||||||||||| || |||||    
T  14336841 accagagcactctggattgaggtgtgt 14336867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 177
Target Start/End: Original strand, 23601825 - 23601940
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || |||| |||||||| ||||| | ||||    
T  23601825 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaataaaatattaacagttaatttagg 23601924  T
Q  162 accaaagcactctgga 177  Q
    |||| |||||||||||    
T  23601925 accagagcactctgga 23601940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 20026988 - 20027109
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatata-atattaaaagttagtata 159  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| ||  ||||| ||||||| ||||| | |     
T  20026988 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaatatatatatattaacagttaatttt 20027087  T
Q  160 ggaccaaagcactctggattaa 181  Q
    |||||| |||||||||||||||    
T  20027088 ggaccagagcactctggattaa 20027109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 22106574 - 22106686
Alignment:
Q  66 accagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggacca 165  Q
    ||||||||||||| |||| |||||||||| ||||||||||||||| || ||||||| ||||||||| || ||| ||||||||| ||||| ||||||||||    
T  22106574 accagagcactctggattaatttaattaacaaggaccagattgttatggagaataattaaattaaacaaaaatgtaatattaacagttaatataggacca 22106673  T
Q  166 aagcactctggat 178  Q
     |||||| |||||    
T  22106674 gagcactttggat 22106686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 15831312 - 15831194
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagga 162  Q
    |||||||||  | ||| |||| |||||||||| |||||||||||| ||||| ||||||| ||||||||| |  ||||||||||||| ||||| |||||||    
T  15831312 aggaccagattattctggattaatttaattaacaaggaccagattattctggagaataattaaattaaacataaatataatattaacagttaatatagga 15831213  T
Q  163 ccaaagcactctggattaa 181  Q
    ||| |||||||||||||||    
T  15831212 ccagagcactctggattaa 15831194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 61 - 188
Target Start/End: Original strand, 31967814 - 31967941
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    ||||||||| | ||||||  ||| |||||||||| |||||| ||||||||||| ||||||| ||||||||| || ||||||||||||  ||||| | |||    
T  31967814 ttaggaccaaaacactctgaattaatttaattaacaaggactagattgttctggagaataattaaattaaacaagaatataatattaccagttaatttag 31967913  T
Q  161 gaccaaagcactctggattaagatgtgt 188  Q
    ||||| |||||||| |||| || |||||    
T  31967914 gaccagagcactctagattgaggtgtgt 31967941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 12846076 - 12845960
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    ||||||||||| |||||| |||| |||||||||| |||||| ||||||||||| ||||||| ||||||||| || |  |||||||| | | ||| | |||    
T  12846076 ttaggaccagaacactctggatt-atttaattaacaaggactagattgttctggagaataattaaattaaacaaga--ataatattgacatttaatttag 12845980  T
Q  161 gaccaaagcactctggatta 180  Q
    ||||| ||||||||||||||    
T  12845979 gaccagagcactctggatta 12845960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 25644202 - 25644131
Alignment:
Q  110 tctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    |||| ||||||| ||||||||| || ||||||||||||| ||||| |||||||||| |||||||||||||||    
T  25644202 tctggagaataattaaattaaacaaaaatataatattaatagttaatataggaccagagcactctggattaa 25644131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 130
Target Start/End: Complemental strand, 15831454 - 15831387
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaa 130  Q
    |||||||||||||||| |||| |||||||||| |||||||||||| ||||| ||||||| | ||||||    
T  15831454 aggaccagagcactctggattaatttaattaacaaggaccagattattctggagaataatttaattaa 15831387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 15831346 - 15831296
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctg 113  Q
    |||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  15831346 aggaccagagcactctggattaatttaattaataaggaccagattattctg 15831296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 20027088 - 20027145
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||| |||| | ||||||| ||||||||||||||||||| |||||||    
T  20027088 ggaccagagcactctggattaaattaattattaaggaccagattgttctggagaataa 20027145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 20026954 - 20027012
Alignment:
Q  123 taaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||| || ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  20026954 taaattaaacaaaaatataatattaacagttaatttaggaccagagcactctggattaa 20027012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 165
Target Start/End: Complemental strand, 16738150 - 16738048
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||  |||||||||| ||||||||||    ||||  || ||| ||||||||| || ||||||||||||| |||||  ||||    
T  16738150 ttaggaccagagcactctggatcaatttaattaacaaggaccagagcactctg--gattaattaaattaaacaaaaatataatattaacagttaacatag 16738053  T
Q  161 gacca 165  Q
    |||||    
T  16738052 gacca 16738048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 6664471 - 6664427
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||    
T  6664471 ttaggaccagagcactctggattaatttaattaacaaggaccaga 6664427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 6672141 - 6672097
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||    
T  6672141 ttaggaccagagcactctggattaatttaattaacaaggaccaga 6672097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 31967767 - 31967838
Alignment:
Q  109 ttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||| ||||| | ||||||||| || ||||||||||||| ||||| | |||||||||| ||||||| |||||    
T  31967767 ttctggagaatgattaaattaaacaa-aatataatattaacagttaatttaggaccaaaacactctgaattaa 31967838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 5e-38; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 40816253 - 40816373
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| |||||    
T  40816253 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaacagttaatatag 40816352  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  40816353 gaccagagcactctggattaa 40816373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 65 - 181
Target Start/End: Original strand, 737065 - 737181
Alignment:
Q  65 gaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggacc 164  Q
    |||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| |||||||||    
T  737065 gaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaacagttaatataggacc 737164  T
Q  165 aaagcactctggattaa 181  Q
    | |||||||||||||||    
T  737165 agagcactctggattaa 737181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 40816350 - 40816469
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| | ||||    
T  40816350 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaacagttaatttagg 40816449  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  40816450 accagagcactctggattaa 40816469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 36696064 - 36696182
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagga 162  Q
    ||||||| |||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| |  ||||||||||||| ||||| |||||||    
T  36696064 aggaccaaagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacataaatataatattaacagttaatatagga 36696163  T
Q  163 ccaaagcactctggattaa 181  Q
    ||| |||||||||||||||    
T  36696164 ccatagcactctggattaa 36696182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 3357908 - 3357788
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||| | || ||||||||||||||| ||| ||| ||||||||| || ||||||||||||| ||||| |||||    
T  3357908 ttaggaccagagcactctggattaatttaattgacaaagaccagattgttctggagagtaattaaattaaacaaaaatataatattaatagttaatatag 3357809  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  3357808 gaccagagcactctggattaa 3357788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 3367574 - 3367454
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||| | || ||||||||||||||| ||| ||| ||||||||| || ||||||||||||| ||||| |||||    
T  3367574 ttaggaccagagcactctggattaatttaattgacaaagaccagattgttctggagagtaattaaattaaacaaaaatataatattaatagttaatatag 3367475  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  3367474 gaccagagcactctggattaa 3367454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 65 - 181
Target Start/End: Original strand, 3396918 - 3397034
Alignment:
Q  65 gaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggacc 164  Q
    ||||||||||||||  ||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| |||||||||    
T  3396918 gaccagagcactctgtattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaacagttaatataggacc 3397017  T
Q  165 aaagcactctggattaa 181  Q
    | | |||||||||||||    
T  3397018 ataacactctggattaa 3397034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 3397011 - 3397130
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    |||||||| | |||||| |||| |||||||||| |||||||||||| ||||| ||||||| ||||||||| || ||||||||||||||||||| | ||||    
T  3397011 taggaccataacactctggattaatttaattaacaaggaccagattattctgaagaataattaaattaaacaaaaatataatattaaaagttaatttagg 3397110  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  3397111 accagagcactctggattaa 3397130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 193
Target Start/End: Original strand, 40816542 - 40816673
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||| ||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || ||||||||||||| ||||| ||| ||    
T  40816542 taggaccagagcattctggattaatttaattaacaaggaccagattgttctggagaataattaaattaagcaaaaatataatattaacagttaatatggg 40816641  T
Q  162 accaaagcactctggattaagatgtgtgtatt 193  Q
    |||| ||||||||||||| || ||||| ||||    
T  40816642 accagagcactctggattgaggtgtgtatatt 40816673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 40816445 - 40816565
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||| ||||||||||| ||||||  ||||||||| || ||||| ||||||| ||||| |||||    
T  40816445 ttaggaccagagcactctggattaatttaattaacaaggacgagattgttctggagaatagttaaattaaacaaaaatatgatattaacagttaatatag 40816544  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||| ||||||||||    
T  40816545 gaccagagcattctggattaa 40816565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 55790336 - 55790216
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||| ||||||| ||||||||| || ||||||||||||| ||||| |||||    
T  55790336 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataattaaattaaacaaaaatataatattaatagttaatatag 55790237  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  55790236 gaccagagcactctggattaa 55790216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 61 - 188
Target Start/End: Complemental strand, 49891279 - 49891152
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||| | |||| ||||| |||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| | ||| |  ||    
T  49891279 ttaggaccagagcactatggattaatttagttaacaaggaccagattgttctggagaataattaaattaaacaagaatataatattaacaattaattgag 49891180  T
Q  161 gaccaaagcactctggattaagatgtgt 188  Q
    ||||| ||||||||||||| | ||||||    
T  49891179 gaccagagcactctggattgatatgtgt 49891152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 3357811 - 3357694
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || ||||| |||||  |||||| | | ||    
T  3357811 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaagcaagaatatcatatt--aagttaattttgg 3357714  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  3357713 accagagcactctggattaa 3357694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 3367477 - 3367360
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || ||||| |||||  |||||| | | ||    
T  3367477 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaagcaagaatatcatatt--aagttaattttgg 3367380  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  3367379 accagagcactctggattaa 3367360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 22140712 - 22140832
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||| ||||||| ||||||||| || ||||||||||||| ||||| |||||    
T  22140712 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataattaaattaaacaaaaatataatattaatagttaatatag 22140811  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| | |||||||||||||    
T  22140812 gaccagaacactctggattaa 22140832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 22152626 - 22152746
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||| ||||||| ||||||||| || ||||||||||||| ||||| |||||    
T  22152626 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataattaaattaaacaaaaatataatattaatagttaatatag 22152725  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| | |||||||||||||    
T  22152726 gaccagaacactctggattaa 22152746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 63 - 179
Target Start/End: Original strand, 25653172 - 25653288
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagga 162  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||| ||| ||||||| ||||||||| || |||||||| |||| | |||   |||||    
T  25653172 aggaccagagcactctggattaatttaattaacaaggaccagattgtcctggagaataattaaattaaacaataatataatgttaacaattaacttagga 25653271  T
Q  163 ccaaagcactctggatt 179  Q
    ||| |||||||||||||    
T  25653272 ccagagcactctggatt 25653288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 36695903 - 36696018
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagga 162  Q
    |||||||||||||||| |||| |||||||||| ||||||||||   ||||   |||||| ||||||||| || ||||||||||||| ||||| |||||||    
T  36695903 aggaccagagcactctggattaatttaattaacaaggaccagagcattct---gaataattaaattaaacaaaaatataatattaacagttaatatagga 36695999  T
Q  163 ccaaagcactctggattaa 181  Q
    ||| |||||||||||||||    
T  36696000 ccagagcactctggattaa 36696018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 22140809 - 22140927
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    |||||||||| |||||| |||| |||||||||| |||||||||||||||||| ||||||| |||||| || || ||||||||||||| |  || | ||||    
T  22140809 taggaccagaacactctggattaatttaattaacaaggaccagattgttctggagaataactaaattgaacaagaatataatattaacatgtaat-tagg 22140907  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  22140908 accagagcactctggattaa 22140927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 22152723 - 22152841
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    |||||||||| |||||| |||| |||||||||| |||||||||||||||||| ||||||| |||||| || || ||||||||||||| |  || | ||||    
T  22152723 taggaccagaacactctggattaatttaattaacaaggaccagattgttctggagaataactaaattgaacaagaatataatattaacatgtaat-tagg 22152821  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  22152822 accagagcactctggattaa 22152841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 61 - 188
Target Start/End: Complemental strand, 55790159 - 55790031
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaa-taacaatataatattaaaagttagtata 159  Q
    |||||||||||||||||| |||| |||||||| | |||||||||||||||||| |||| |  |||||||||  || |||||| |||||  ||||| | ||    
T  55790159 ttaggaccagagcactctggattgatttaattgacaaggaccagattgttctggagaaaagttaaattaaacaaaaaatatattattagcagttaattta 55790060  T
Q  160 ggaccaaagcactctggattaagatgtgt 188  Q
    |||||| ||||||||||||| || |||||    
T  55790059 ggaccagagcactctggattgaggtgtgt 55790031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 55790239 - 55790180
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| |||||||    
T  55790239 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataa 55790180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 3357715 - 3357658
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||    
T  3357715 ggaccagagcactctggattaatttaattattaaggaccagattgttctggagaataa 3357658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 3367381 - 3367324
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||    
T  3367381 ggaccagagcactctggattaatttaattattaaggaccagattgttctggagaataa 3367324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 3396820 - 3396904
Alignment:
Q  97 aggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||| | ||||| ||||| | ||||||||| || ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  3396820 aggaccagaatattctggagaatgattaaattaaacaaaaatataatattaacagttaatttaggaccagagcactctggattaa 3396904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 737001 - 737085
Alignment:
Q  97 aggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||| | ||||| ||||| | ||||||||| || ||||||||||||| ||||| | || ||||| |||||||||||||||    
T  737001 aggaccagaatattctggagaatgattaaattaaacaaaaatataatattaacagttaatttaagaccagagcactctggattaa 737085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 36695995 - 36696038
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  36695995 taggaccagagcactctggattaatttaattaataaggaccaga 36696038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 25653123 - 25653194
Alignment:
Q  110 tctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    |||| ||||| | ||||||||| || ||||||||||||| ||||| |  ||||||| |||||||||||||||    
T  25653123 tctggagaatgattaaattaaacaaaaatataatattaacagttaattgaggaccagagcactctggattaa 25653194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 3357929 - 3357884
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  3357929 aatataatattaacagttaatttaggaccagagcactctggattaa 3357884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 3367595 - 3367550
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  3367595 aatataatattaacagttaatttaggaccagagcactctggattaa 3367550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 22140691 - 22140736
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  22140691 aatataatattaatagttactttaggaccagagcactctggattaa 22140736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 22152605 - 22152650
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  22152605 aatataatattaatagttactttaggaccagagcactctggattaa 22152650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 55790357 - 55790312
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  55790357 aatataatattaacagttactttaggaccagagcactctggattaa 55790312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 3396880 - 3396924
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    
T  3396880 ttaggaccagagcactctggattaatttaattaacaatgaccaga 3396924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 36696030 - 36696070
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggacca 103  Q
    ||||||||| ||||||||||| |||||||||| ||||||||    
T  36696030 aggaccagaacactctagattaatttaattaacaaggacca 36696070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 37577175 - 37577056
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| ||||||    
T  37577175 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaagaatataatattaacagttaatatagg 37577076  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  37577075 accagagcactctggattaa 37577056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 37577271 - 37577152
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| ||||||    
T  37577271 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaacagttaatatagg 37577172  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  37577171 accagagcactctggattaa 37577152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 37586287 - 37586168
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| ||||||    
T  37586287 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaagaatataatattaacagttaatatagg 37586188  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  37586187 accagagcactctggattaa 37586168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 37586383 - 37586264
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| ||||||    
T  37586383 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaacagttaatatagg 37586284  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  37586283 accagagcactctggattaa 37586264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 61 - 178
Target Start/End: Complemental strand, 36433119 - 36433002
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| |||||    
T  36433119 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaacagttaatatag 36433020  T
Q  161 gaccaaagcactctggat 178  Q
    ||||| ||||||||||||    
T  36433019 gaccagagcactctggat 36433002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 360422 - 360540
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagga 162  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||  ||||||||| || ||||||||||||| ||||| |||||||    
T  360422 aggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaatatttaaattaaacaaaaatataatattaacagttaatatagga 360521  T
Q  163 ccaaagcactctggattaa 181  Q
    ||| |||||||||||||||    
T  360522 ccagagcactctggattaa 360540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 345783 - 345901
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagga 162  Q
    |||||||||||||| | |||| |||||||||| |||||||||||||||||| ||||||  ||||||||| || ||||||||||||| ||||| |||||||    
T  345783 aggaccagagcactatggattaatttaattaacaaggaccagattgttctggagaatatttaaattaaacaaaaatataatattaacagttaatatagga 345882  T
Q  163 ccaaagcactctggattaa 181  Q
    ||| |||||||||||||||    
T  345883 ccagagcactctggattaa 345901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 65 - 170
Target Start/End: Original strand, 21747271 - 21747376
Alignment:
Q  65 gaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggacc 164  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| |||||||||    
T  21747271 gaccagagcactctagattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaacagttaatataggacc 21747370  T
Q  165 aaagca 170  Q
    | ||||    
T  21747371 agagca 21747376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 63 - 184
Target Start/End: Complemental strand, 29189700 - 29189579
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagga 162  Q
    |||||||||||||||| |||| || ||||||| |||||||||||| ||||| ||||||| ||||||||| |  ||||||||||||| ||||| |||||||    
T  29189700 aggaccagagcactctggattaatgtaattaacaaggaccagattattctggagaataattaaattaaacataaatataatattaacagttaatatagga 29189601  T
Q  163 ccaaagcactctggattaagat 184  Q
    ||| ||||||||||||||||||    
T  29189600 ccagagcactctggattaagat 29189579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 177
Target Start/End: Original strand, 345878 - 345993
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || |||| |||||||| ||||| | ||||    
T  345878 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaataaaatattaacagttaatttagg 345977  T
Q  162 accaaagcactctgga 177  Q
    |||| |||||||||||    
T  345978 accagagcactctgga 345993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 177
Target Start/End: Original strand, 360517 - 360632
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || |||| |||||||| ||||| | ||||    
T  360517 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaataaaatattaacagttaatttagg 360616  T
Q  162 accaaagcactctgga 177  Q
    |||| |||||||||||    
T  360617 accagagcactctgga 360632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 34460689 - 34460571
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || ||||||||||||| || || | ||||    
T  34460689 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaagcaagaatataatattaacaggtaat-tagg 34460591  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  34460590 accagagcactctggattaa 34460571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 34474946 - 34474828
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || ||||||||||||| || || | ||||    
T  34474946 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaagcaagaatataatattaacaggtaat-tagg 34474848  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  34474847 accagagcactctggattaa 34474828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 61 - 177
Target Start/End: Complemental strand, 13460027 - 13459911
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    ||||||||||||||||||  ||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || ||||||||||||| |||||   |||    
T  13460027 ttaggaccagagcactctgaattaatttaattaacaaggaccagattgttctggagaataattaaattaataaaaaatataatattaacagttaacttag 13459928  T
Q  161 gaccaaagcactctgga 177  Q
    ||||| |||||||||||    
T  13459927 gaccagagcactctgga 13459911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 13460123 - 13460003
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||| ||||||||||| |||| |||||||||| ||| |||||||||||||| ||||||| ||||||||| || |||||||||||||  |||| | |||    
T  13460123 ttaggatcagagcactctggattaatttaattaacaagaaccagattgttctggagaataattaaattaaacaaaaatataatattaacggttaatttag 13460024  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| ||||||||| |||||    
T  13460023 gaccagagcactctgaattaa 13460003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 37577368 - 37577248
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||| ||||||| ||||||||| || ||||||||||||| ||||| |||||    
T  37577368 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataattaaattaaacaaaaatataatattaacagttaatatag 37577269  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  37577268 gaccagagcactctggattaa 37577248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 37586480 - 37586360
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||| ||||||| ||||||||| || ||||||||||||| ||||| |||||    
T  37586480 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataattaaattaaacaaaaatataatattaacagttaatatag 37586381  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  37586380 gaccagagcactctggattaa 37586360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 34460786 - 34460666
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||  ||||||| ||||||||| || ||||||||||||| ||||| |||||    
T  34460786 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctagagaataattaaattaaacaaaaatataatattaatagttaatatag 34460687  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  34460686 gaccagagcactctggattaa 34460666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 34475043 - 34474923
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||  ||||||| ||||||||| || ||||||||||||| ||||| |||||    
T  34475043 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctagagaataattaaattaaacaaaaatataatattaatagttaatatag 34474944  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  34474943 gaccagagcactctggattaa 34474923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 36433195 - 36433095
Alignment:
Q  80 gatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggatt 179  Q
    |||| ||||| |||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| | |||||||| |||||||||||||    
T  36433195 gattaatttagttaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaacagttaat-taggaccagagcactctggatt 36433097  T
Q  180 aa 181  Q
    ||    
T  36433096 aa 36433095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 24061232 - 24061346
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| || |||||||    |||| |||||||     |||||||| ||||||||||||| ||||| ||||||    
T  24061232 taggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataa-----ttaaataaaaatataatattaacagttaatatagg 24061326  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  24061327 accagagcactctggattaa 24061346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 36432737 - 36432650
Alignment:
Q  91 ttaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggat 178  Q
    |||| |||||||||||||||||  ||||||| ||||||||| || ||||||||||||| ||||| |||||||||| |||| |||||||    
T  36432737 ttaacaaggaccagattgttctagagaataattaaattaaacaaaaatataatattaacagttaatataggaccagagcaatctggat 36432650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 36433248 - 36433196
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctg 113  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  36433248 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctg 36433196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 29189783 - 29189712
Alignment:
Q  110 tctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    |||| ||||| | ||||||||| || ||||||||||||| ||||| |||| ||||| |||||||||||||||    
T  29189783 tctgaagaatgattaaattaaacaaaaatataatattaacagttaatataagaccagagcactctggattaa 29189712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 345747 - 345791
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||    
T  345747 ttaggaccagagcactctggattaatttaattaacaaggaccaga 345791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 360386 - 360430
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||    
T  360386 ttaggaccagagcactctggattaatttaattaacaaggaccaga 360430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 21747206 - 21747257
Alignment:
Q  130 aataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||| ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  21747206 aataaaaatataatattaacagttaatttaggaccagagcactctggattaa 21747257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 24061213 - 24061255
Alignment:
Q  139 ataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    |||||||||| ||||| |||||||||| |||||||||||||||    
T  24061213 ataatattaatagttaatataggaccagagcactctggattaa 24061255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 24061323 - 24061364
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggacca 103  Q
    ||||||||||||||||| |||| |||||||||| ||||||||    
T  24061323 taggaccagagcactctggattaatttaattaacaaggacca 24061364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 24061430 - 24061475
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  24061430 aatataatattaacagttaatttaggaccagagcactctggattaa 24061475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 34460807 - 34460762
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  34460807 aatataatattaacagttactttaggaccagagcactctggattaa 34460762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 34475064 - 34475019
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  34475064 aatataatattaacagttactttaggaccagagcactctggattaa 34475019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 36433269 - 36433224
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  36433269 aatataatattaacagttaatttaggaccagagcactctggattaa 36433224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 37577389 - 37577344
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  37577389 aatataatattaacagttaatttaggaccagagcactctggattaa 37577344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 37586501 - 37586456
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  37586501 aatataatattaacagttaatttaggaccagagcactctggattaa 37586456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 13460171 - 13460099
Alignment:
Q  109 ttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||| ||||| | ||||||||| || ||||||||||||| | ||| | ||||| || |||||||||||||||    
T  13460171 ttctggagaatgattaaattaaacaaaaatataatattaacaattaatttaggatcagagcactctggattaa 13460099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 21747233 - 21747277
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    
T  21747233 ttaggaccagagcactctggattaatttaattaacaatgaccaga 21747277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 29189732 - 29189692
Alignment:
Q  65 gaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||| |||| |||||||||| ||||||||||    
T  29189732 gaccagagcactctggattaatttaattaacaaggaccaga 29189692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 78; Significance: 3e-36; HSPs: 6)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 61 - 178
Target Start/End: Complemental strand, 16614 - 16497
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    ||||||| |||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||||||||| |||||    
T  16614 ttaggacgagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaaaagttaatatag 16515  T
Q  161 gaccaaagcactctggat 178  Q
    ||||| ||||||||||||    
T  16514 gaccagagcactctggat 16497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 61 - 178
Target Start/End: Complemental strand, 9692 - 9575
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||| ||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| |||||    
T  9692 ttaggaccggagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaacagttaatatag 9593  T
Q  161 gaccaaagcactctggat 178  Q
    ||||| ||||||||||||    
T  9592 gaccagagcactctggat 9575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 15598 - 15479
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    |||||||||| |||||| |||| |||||||||| |||||||||||| ||||| ||||||| ||||||||| || ||||||||||||| ||||| | || |    
T  15598 taggaccagaacactctggattaatttaattaacaaggaccagattattctggagaataattaaattaaacaaaaatataatattaacagttaatttatg 15499  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  15498 accagagcactctggattaa 15479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 16517 - 16399
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||  |||||||||| |||||||||||||||||| ||||||| |||||||||  | ||||||||||||| | ||| ||||||    
T  16517 taggaccagagcactctggata-atttaattaacaaggaccagattgttctggagaataattaaattaaacgaaaatataatattaacaattaatatagg 16419  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  16418 accagagcactctggattaa 16399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 9595 - 9477
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||  |||||||||| | |||||||||||||||| ||||||| |||||||||  | ||||||||||||| | ||| ||||||    
T  9595 taggaccagagcactctggata-atttaattaacacggaccagattgttctggagaataattaaattaaacgaaaatataatattaacaattaatatagg 9497  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  9496 accagagcactctggattaa 9477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 15641 - 15575
Alignment:
Q  115 agaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||| ||||||||| || ||||||||||||| ||||| |||||||||| | |||||||||||||    
T  15641 agaataattaaattaaacaaaaatataatattaacagttaatataggaccagaacactctggattaa 15575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 77; Significance: 1e-35; HSPs: 4)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 187392 - 187512
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| |||||  ||||    
T  187392 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaacagttaacatag 187491  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  187492 gaccagagcactctggattaa 187512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 177940 - 178048
Alignment:
Q  73 cactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcact 172  Q
    |||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| |||||  ||||||||| ||||||    
T  177940 cactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaacagttaacataggaccagagcact 178039  T
Q  173 ctggattaa 181  Q
    |||||||||    
T  178040 ctggattaa 178048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 187332 - 187416
Alignment:
Q  97 aggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||| | ||||| ||||| | ||||||||| || ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  187332 aggaccagaatattctggagaatgattaaattaaacaaaaatataatattaacagttaatttaggaccagagcactctggattaa 187416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 177834 - 177918
Alignment:
Q  97 aggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||| | ||||| ||||| | ||||||||| || ||||||||||||| ||||| | |||||| | |||||||||||||||    
T  177834 aggaccagaatattctggagaatgattaaattaaacaaaaatataatattaacagttaatttaggactagagcactctggattaa 177918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 65 - 181
Target Start/End: Complemental strand, 12594886 - 12594770
Alignment:
Q  65 gaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggacc 164  Q
    |||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| |||||||||    
T  12594886 gaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaacagttaatataggacc 12594787  T
Q  165 aaagcactctggattaa 181  Q
    | |||||||||||||||    
T  12594786 agagcactctggattaa 12594770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 16281129 - 16281249
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||  ||||||||| || ||||||||||||| ||||| |||||    
T  16281129 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaatatttaaattaaacaaaaatataatattaacagttaatatag 16281228  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  16281229 gaccagagcactctggattaa 16281249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 16295331 - 16295451
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||  ||||||||| || ||||||||||||| ||||| |||||    
T  16295331 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaatatttaaattaaacaaaaatataatattaacagttaatatag 16295430  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  16295431 gaccagagcactctggattaa 16295451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 3423207 - 3423326
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||| ||| ||||||||| || ||||||||||||| ||||| ||||||    
T  3423207 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagagtaattaaattaaacaaaaatataatattaatagttaatatagg 3423306  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  3423307 accagagcactctggattaa 3423326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 4889919 - 4890038
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| | |||    
T  4889919 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaacagttaat-tag 4890017  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  4890018 gaccagagcactctggattaa 4890038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 62 - 188
Target Start/End: Complemental strand, 12594793 - 12594667
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| ||| ||    
T  12594793 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatattaacagttaatatggg 12594694  T
Q  162 accaaagcactctggattaagatgtgt 188  Q
    |||| |||| |||||||| || |||||    
T  12594693 accagagcattctggattgaggtgtgt 12594667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 61 - 179
Target Start/End: Original strand, 17452988 - 17453106
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || |||| |||||||| ||||| | |||    
T  17452988 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaataaaatattaacagttaatttag 17453087  T
Q  161 gaccaaagcactctggatt 179  Q
    ||||| |||||||||||||    
T  17453088 gaccagagcactctggatt 17453106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 61 - 179
Target Start/End: Complemental strand, 17464283 - 17464165
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || |||| |||||||| ||||| | |||    
T  17464283 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaataaaatattaacagttaatttag 17464184  T
Q  161 gaccaaagcactctggatt 179  Q
    ||||| |||||||||||||    
T  17464183 gaccagagcactctggatt 17464165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 61 - 179
Target Start/End: Original strand, 17588931 - 17589049
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || |||| |||||||| ||||| | |||    
T  17588931 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaataaaatattaacagttaatttag 17589030  T
Q  161 gaccaaagcactctggatt 179  Q
    ||||| |||||||||||||    
T  17589031 gaccagagcactctggatt 17589049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 7342680 - 7342797
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| || ||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| | ||||    
T  7342680 taggaccagagcactctggattaatttaattaacaaagaccagattgttctggagaataattaaattaaacaaaaatataatattaatagttaatttagg 7342779  T
Q  162 accaaagcactctggatt 179  Q
    |||| |||||||||||||    
T  7342780 accagagcactctggatt 7342797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 3423110 - 3423230
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||| | || ||||||||||||||| ||| ||| ||||||||| || ||||||||||||| ||||| |||||    
T  3423110 ttaggaccagagcactctggattaatttaattgacaaagaccagattgttctggagagtaattaaattaaacaaaaatataatattaatagttaatatag 3423209  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  3423210 gaccagagcactctggattaa 3423230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 23445162 - 23445042
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||| | |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| | |||    
T  23445162 ttaggaccagagcactctggattaatttaattcacaaggaccagattgttctggagaataattaaattaaacaagaatataatattaacagttaatttag 23445063  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| ||||||||| |||||    
T  23445062 gaccagagcactctgaattaa 23445042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 177
Target Start/End: Original strand, 16281226 - 16281341
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || |||| |||||||| ||||| | ||||    
T  16281226 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaataaaatattaacagttaatttagg 16281325  T
Q  162 accaaagcactctgga 177  Q
    |||| |||||||||||    
T  16281326 accagagcactctgga 16281341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 177
Target Start/End: Original strand, 16295428 - 16295543
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || |||| |||||||| ||||| | ||||    
T  16295428 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaataaaatattaacagttaatttagg 16295527  T
Q  162 accaaagcactctgga 177  Q
    |||| |||||||||||    
T  16295528 accagagcactctgga 16295543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 17464378 - 17464259
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || |||| ||||| || ||||| | ||||    
T  17464378 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaataaaatatcaacagttaatttagg 17464279  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  17464278 accagagcactctggattaa 17464259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 17588836 - 17588955
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || |||| ||||| || ||||| | ||||    
T  17588836 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaataaaatatcaacagttaatttagg 17588935  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  17588936 accagagcactctggattaa 17588955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 61 - 178
Target Start/End: Original strand, 4890014 - 4890132
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaa-ttaaataacaatataatattaaaagttagtata 159  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| |||| || || || ||||||||||||| ||||| ||||    
T  4890014 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaatttgaacaaaaatataatattaacagttaatata 4890113  T
Q  160 ggaccaaagcactctggat 178  Q
    |||||| ||||||||||||    
T  4890114 ggaccagagcactctggat 4890132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 23445066 - 23444946
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    ||||||||||||||||||  ||| |||||||||| |||||||||||| ||||| ||||||| ||||||||| || |||| |||||||| ||||| | |||    
T  23445066 ttaggaccagagcactctgaattaatttaattaacaaggaccagattattctggagaataattaaattaaacaagaataaaatattaacagttaatttag 23444967  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  23444966 gaccagagcactctggattaa 23444946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 792671 - 792789
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || |||||||||||  |||||| | | |    
T  792671 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaagcaagaatataatatt--aagttaattttg 792768  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  792769 gaccagagcactctggattaa 792789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 808454 - 808572
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || |||||||||||  |||||| | | |    
T  808454 ttaggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaagcaagaatataatatt--aagttaattttg 808551  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  808552 gaccagagcactctggattaa 808572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 26124935 - 26124817
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    ||||||||||||||||||  ||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || |||||||||||  |||||| | | |    
T  26124935 ttaggaccagagcactctgaattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaatataatatt--aagttaattttg 26124838  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  26124837 gaccagagcactctggattaa 26124817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 7342583 - 7342703
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    ||||||||||||||||||  ||| |||||||||| ||||||||||||||| || |  |||| ||||||||| || ||||||||||||| | ||| |||||    
T  7342583 ttaggaccagagcactctgcattaatttaattaacaaggaccagattgttttggacgataattaaattaaacaaaaatataatattaacaattaatatag 7342682  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  7342683 gaccagagcactctggattaa 7342703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 3423303 - 3423420
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || ||||| |||||  |||||| | | ||    
T  3423303 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaagcaagaatatcatatt--aagttaattttgg 3423400  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  3423401 accagagcactctggattaa 3423420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 16264563 - 16264680
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || ||||| |||||||  | || | | ||    
T  16264563 taggaccagagcactctagattaatttaattaacaaggaccagattgttctggagaataactaaattaagcaagaatatcatattaa--gctaattttgg 16264660  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  16264661 accagagcactctggattaa 16264680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 16272132 - 16272252
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||| ||||||| ||| ||||| || ||||||||||||| ||||| |||||    
T  16272132 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataattaatttaaacaaaaatataatattaatagttaatatag 16272231  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||||||||||    
T  16272232 gaccagagcactctggattaa 16272252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 61 - 188
Target Start/End: Original strand, 12606818 - 12606945
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    ||||||||||| |||||| |||  |||||||||| |||||||| ||||||||| ||||||| ||||||||| || ||||||||||||| | ||| |  ||    
T  12606818 ttaggaccagaacactctggatcaatttaattaacaaggaccatattgttctggagaataattaaattaaacaagaatataatattaacaattaattaag 12606917  T
Q  161 gaccaaagcactctggattaagatgtgt 188  Q
    ||||| ||||||||||||| | ||||||    
T  12606918 gaccagagcactctggattgatatgtgt 12606945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 17452911 - 17453012
Alignment:
Q  80 gatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggatt 179  Q
    |||| |||||||||| |||||||||||||||||| ||||||| ||||||||| || |||| ||||| || ||||| | |||||||| |||||||||||||    
T  17452911 gattaatttaattaacaaggaccagattgttctggagaataattaaattaaacaaaaataaaatatcaacagttaatttaggaccagagcactctggatt 17453010  T
Q  180 aa 181  Q
    ||    
T  17453011 aa 17453012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 16272229 - 16272346
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagg 161  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||||||  || ||||| |||||||  | || | | ||    
T  16272229 taggaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataactaaattaagcaagaatatcatattaa--gctaattttgg 16272326  T
Q  162 accaaagcactctggattaa 181  Q
    |||| |||||||||||||||    
T  16272327 accagagcactctggattaa 16272346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 17464480 - 17464355
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaat-----aacaatataatattaaaagttag 155  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||| ||||||| ||||||||||     || ||||||||||||| |||||     
T  17464480 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataattaaattaaattaaaaaaaaatataatattaatagttaa 17464381  T
Q  156 tataggaccaaagcactctggattaa 181  Q
    |||||||||| |||||||||||||||    
T  17464380 tataggaccagagcactctggattaa 17464355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 17588734 - 17588859
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaat-----aacaatataatattaaaagttag 155  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||| ||||||| ||||||||||     || ||||||||||||| |||||     
T  17588734 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataattaaattaaattaaaaaaaaatataatattaatagttaa 17588833  T
Q  156 tataggaccaaagcactctggattaa 181  Q
    |||||||||| |||||||||||||||    
T  17588834 tataggaccagagcactctggattaa 17588859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 16264466 - 16264586
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||| ||||||| ||| ||||| || ||||||| ||||| ||||| |||||    
T  16264466 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataattaatttaaacaaaaatataagattaatagttaatatag 16264565  T
Q  161 gaccaaagcactctggattaa 181  Q
    ||||| |||||||| ||||||    
T  16264566 gaccagagcactctagattaa 16264586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 17452759 - 17452882
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaat-----aacaatataatattaaaagttagta 157  Q
    |||||||||||||||| |||| |||||||||| || |||||||    |||| ||||||| ||||||||||     || ||||||||||||| ||||| ||    
T  17452759 aggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataattaaattaaattaaaaaaaaatataatattaatagttaata 17452858  T
Q  158 taggaccaaagcactctggattaa 181  Q
    |||||||| |||||||||||||||    
T  17452859 taggaccagagcactctggattaa 17452882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 3423399 - 3423456
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||    
T  3423399 ggaccagagcactctggattaatttaattattaaggaccagattgttctggagaataa 3423456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 16264659 - 16264716
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||    
T  16264659 ggaccagagcactctggattaatttaattattaaggaccagattgttctggagaataa 16264716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 16272325 - 16272382
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||    
T  16272325 ggaccagagcactctggattaatttaattattaaggaccagattgttctggagaataa 16272382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 26124838 - 26124781
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||    
T  26124838 ggaccagagcactctggattaatttaattattaaggaccagattgttctggagaataa 26124781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 12594984 - 12594900
Alignment:
Q  97 aggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||| | ||||| ||||| | ||||||||| || ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  12594984 aggaccagaatattctggagaatgattaaattaaacaaaaatataatattaacagttaatttaggaccagagcactctggattaa 12594900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 165
Target Start/End: Complemental strand, 37287353 - 37287249
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    |||| ||||||| ||| ||||| |  ||||||||||||| ||||| |||||    
T  37287353 ttaggaccagagcactctggattaatttaattaacaatgaccagagcactctggagaataattaatttaaacagaaatataatattaatagttaatatag 37287254  T
Q  161 gacca 165  Q
    |||||    
T  37287253 gacca 37287249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 17452859 - 17452910
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctg 113  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  17452859 taggaccagagcactctggattaatttaattaacaaggaccagattgttctg 17452910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 23445209 - 23445138
Alignment:
Q  110 tctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    |||| ||||| | ||||||||| || ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  23445209 tctggagaatgattaaattaaacaaaaatataatattaacagttaatttaggaccagagcactctggattaa 23445138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 792768 - 792825
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||| |||| ||| ||||| | ||||||||||||||||| |||||||    
T  792768 ggaccagagcactctggattaattcaattattgaggaccagattgttctggagaataa 792825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 808551 - 808608
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||| |||| ||| ||||| | ||||||||||||||||| |||||||    
T  808551 ggaccagagcactctggattaattcaattattgaggaccagattgttctgaagaataa 808608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 37287255 - 37287173
Alignment:
Q  97 aggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||| ||||| ||||||| ||||||||  || |||||||||||  |||||| | | |||||| |||||||||||||||    
T  37287255 aggaccagattattctggagaataactaaattaagcaagaatataatatt--aagttaattttggaccagagcactctggattaa 37287173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 17452723 - 17452767
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||    
T  17452723 ttaggaccagagcactctggattaatttaattaacaaggaccaga 17452767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 19352390 - 19352480
Alignment:
Q  14 ttctggagagtgatttaacttaattgcaagctaatattaagatttgg-ttaggaccagagcactctagatttatttaattaataaggacca 103  Q
    ||||| ||| ||||| || ||||||||||| |||||| || | |||| ||||||| ||| || ||| |||| |||||||||||||||||||    
T  19352390 ttctgtagaatgattaaaattaattgcaagataatatcaaaaattggattaggactagaacattctggattaatttaattaataaggacca 19352480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 792650 - 792695
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  792650 aatataatattaacagttactttaggaccagagcactctggattaa 792695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 808433 - 808478
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  808433 aatataatattaacagttactttaggaccagagcactctggattaa 808478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 3423089 - 3423134
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  3423089 aatataatattaacagttaatttaggaccagagcactctggattaa 3423134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 4889898 - 4889943
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  4889898 aatataatattaacagttaatttaggaccagagcactctggattaa 4889943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 16264445 - 16264490
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  16264445 aatataatattaacagttaatttaggaccagagcactctggattaa 16264490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 16272111 - 16272156
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  16272111 aatataatattaacagttaatttaggaccagagcactctggattaa 16272156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 37287374 - 37287329
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  37287374 aatataatattaacagttaatttaggaccagagcactctggattaa 37287329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 12594924 - 12594880
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||||| |||| |||||||||| || |||||||    
T  12594924 ttaggaccagagcactctggattaatttaattaacaatgaccaga 12594880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 67; Significance: 1e-29; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 57177 - 57295
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagga 162  Q
    |||||||||||||||| |||| ||||| |||| |||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||| | | |||    
T  57177 aggaccagagcactctggattaatttagttaacaaggaccagattgttctggagaataattaaattaaacaagaatataatattaacagttaattttgga 57276  T
Q  163 ccaaagcactctggattaa 181  Q
    ||| |||||||||||||||    
T  57277 ccagagcactctggattaa 57295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 57115 - 57199
Alignment:
Q  97 aggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||| | ||||| ||||| | ||||||||| || ||||||||||||| | ||| || ||||||| |||||||||||||||    
T  57115 aggaccagaatattctggagaatgattaaattaaacaaaaatataatattaacaattaatacaggaccagagcactctggattaa 57199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 57274 - 57337
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaat 127  Q
    ||||||||||||||| |||| |||||| ||| || ||||||||||||||| ||||||| |||||    
T  57274 ggaccagagcactctggattaatttaaataacaacgaccagattgttctggagaataattaaat 57337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 57382 - 57426
Alignment:
Q  77 ctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||||    
T  57382 ctagattaatttaattattaaggaccagattgttctggagaataa 57426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 2686182 - 2686062
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||| | |||||||||||||||| | ||| ||| ||||||||| || |||||| |||||| ||||| |||||    
T  2686182 ttaggaccagagcactctggattaatttaattgacaaggaccagattgttccggagagtaattaaattaaacaaaaatatagtattaatagttaatatag 2686083  T
Q  161 gaccaaagcactctggattaa 181  Q
     |||| |||||||||||||||    
T  2686082 aaccagagcactctggattaa 2686062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 49933769 - 49933649
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||| ||||||||||| |||| |||||||||| ||||||||||| |||||| ||||||| ||| ||||| || |||||||||| || ||||| | |||    
T  49933769 ttaggatcagagcactctggattaatttaattaacaaggaccagatcgttctggagaataattaatttaaacaagaatataatatcaacagttaatttag 49933670  T
Q  161 gaccaaagcactctggattaa 181  Q
    || || |||||||||||||||    
T  49933669 gatcagagcactctggattaa 49933649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 2686081 - 2685968
Alignment:
Q  66 accagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggacca 165  Q
    ||||||||||||| |||| |||||||||| ||||| |||||||||||| ||||||| ||||||| | || |||||||||||  |||||| | | ||||||    
T  2686081 accagagcactctggattaatttaattaacaaggatcagattgttctggagaataattaaattagacaagaatataatatt--aagttaattttggacca 2685984  T
Q  166 aagcactctggattaa 181  Q
     |||||||||||||||    
T  2685983 gagcactctggattaa 2685968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 64 - 181
Target Start/End: Original strand, 20312911 - 20313025
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggac 163  Q
    ||||||||||||||| |||| |||||||||| |||||||||||  ||||| | ||||| |||||||||  | || |||| ||||| ||||| ||||||||    
T  20312911 ggaccagagcactctggattaatttaattaacaaggaccagatcattctggacaataattaaattaaa--agaa-ataacattaacagttaatataggac 20313007  T
Q  164 caaagcactctggattaa 181  Q
    || |||||||||||||||    
T  20313008 cagagcactctggattaa 20313025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 20312678 - 20312762
Alignment:
Q  97 aggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||| | ||||| ||||| | ||||||||| || ||||||||||||| ||||  |||||||||| |||||||||||||||    
T  20312678 aggaccagaatattctggagaatgattaaattaaacaaaaatataatattaacagttgatataggaccagagcactctggattaa 20312762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 2685989 - 2685939
Alignment:
Q  64 ggaccagagcactctagatttatttaattaataaggaccagattgttctgc 114  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||||    
T  2685989 ggaccagagcactctggattaatttaattattaaggaccagattgttctgc 2685939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 20312825 - 20312883
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    |||||||||||||||| |||| |||||||||| | ||||||||| |||||| |||||||    
T  20312825 aggaccagagcactctggattaatttaattaacagggaccagatcgttctggagaataa 20312883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 121
Target Start/End: Original strand, 20312739 - 20312798
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataa 121  Q
    ||||||||||||||||| |||| |||||||||| |  ||||||||| ||||| |||||||    
T  20312739 taggaccagagcactctggattaatttaattaacactgaccagattattctggagaataa 20312798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 2686203 - 2686158
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||    
T  2686203 aatataatattaacagttaatttaggaccagagcactctggattaa 2686158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 20312887 - 20312932
Alignment:
Q  136 aatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    ||||||||||||| ||||| ||| |||||| |||||||||||||||    
T  20312887 aatataatattaacagttaatatgggaccagagcactctggattaa 20312932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 59; Significance: 6e-25; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 2599 - 2717
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatagga 162  Q
    |||||||||||||||| |||| ||||||| || |||||||| ||||||||| ||||||||||||||||| || ||||||||||||| | | |   |||||    
T  2599 aggaccagagcactctggattaatttaatgaacaaggaccatattgttctggagaataaataaattaaacaataatataatattaacaataaacttagga 2698  T
Q  163 ccaaagcactctggattaa 181  Q
    ||| |||||||||||||||    
T  2699 ccagagcactctggattaa 2717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 1093 - 1182
Alignment:
Q  65 gaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagtta 154  Q
    |||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| ||||| ||| || ||||||||||||| |||||    
T  1093 gaccagagcactctggattaatttaattaacaaggaccagattgttctggagaataattaaatcaaacaataatataatattaacagtta 1182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 2550 - 2621
Alignment:
Q  110 tctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    |||| ||||| | ||||||||| || ||||||||||||| ||||| |  ||||||| |||||||||||||||    
T  2550 tctggagaatgattaaattaaacaaaaatataatattaacagttaattgaggaccagagcactctggattaa 2621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 62668 - 62546
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataa----ggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtat 158  Q
    |||||||||||||||| |||| |||||||||| ||    |||||||||| ||||| ||||||| ||||||||| |  ||||||||||||| ||||| |||    
T  62668 aggaccagagcactctggattaatttaattaacaaacaaggaccagattattctggagaataattaaattaaacataaatataatattaacagttaatat 62569  T
Q  159 aggaccaaagcactctggattaa 181  Q
    ||||||| |||||||||||||||    
T  62568 aggaccagagcactctggattaa 62546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 98 - 181
Target Start/End: Complemental strand, 62763 - 62680
Alignment:
Q  98 ggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    |||||||| | ||||| |||||||  |||||||| || ||||||||||||| ||||| |||||||||| |||||||||||||||    
T  62763 ggaccagaatattctggagaataataaaattaaacaaaaatataatattaacagttaatataggaccagagcactctggattaa 62680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 62703 - 62660
Alignment:
Q  62 taggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||    
T  62703 taggaccagagcactctggattaatttaattaacaaggaccaga 62660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 61 - 188
Target Start/End: Complemental strand, 10171 - 10044
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtatag 160  Q
    |||||||||||||||||| |||| |||||||||| |||||||||| || |||| ||||||| ||||||||| || ||||||||||||| | |||    ||    
T  10171 ttaggaccagagcactctggattaatttaattaacaaggaccagactgctctggagaataattaaattaaacaagaatataatattaacaattaactgag 10072  T
Q  161 gaccaaagcactctggattaagatgtgt 188  Q
    ||||| ||||||||||||| | ||||||    
T  10071 gaccagagcactctggattgatatgtgt 10044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 10218 - 10147
Alignment:
Q  110 tctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    |||| ||||| | ||||||||| || ||||||||||||| ||||  | |||||||| |||||||||||||||    
T  10218 tctggagaatgattaaattaaacaaaaatataatattaacagtttatttaggaccagagcactctggattaa 10147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 85 - 181
Target Start/End: Original strand, 14656 - 14752
Alignment:
Q  85 atttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    |||||||||| |||||||||||||||||| |||||||  | |||||| || ||||||||| ||| ||||| | |||||||| |||||||||||||||    
T  14656 atttaattaagaaggaccagattgttctggagaataataatattaaacaagaatataataataacagttaatttaggaccagagcactctggattaa 14752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 85 - 181
Target Start/End: Original strand, 17990 - 18086
Alignment:
Q  85 atttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggattaa 181  Q
    |||||||||| |||||||||||||||||| |||||||  | |||||| || ||||||||| ||| ||||| | |||||||| |||||||||||||||    
T  17990 atttaattaagaaggaccagattgttctggagaataataatattaaacaagaatataataataacagttaatttaggaccagagcactctggattaa 18086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 145992 - 146077
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccagattgttctgcagaataaataaattaaataacaatataatattaa 148  Q
    |||||||||||||||| |||| |||||||| | |||||||| |||||| || ||||||| ||||||||| || |||||||||||||    
T  145992 aggaccagagcactctggattaatttaatttacaaggaccaaattgttttggagaataattaaattaaacaataatataatattaa 146077  T

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Target: scaffold0051 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 57469 - 57513
Alignment:
Q  61 ttaggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||    
T  57469 ttaggaccagagcactctggattaatttaattaacaaggaccaga 57513  T

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Target: scaffold0051; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 57505 - 57547
Alignment:
Q  63 aggaccagagcactctagatttatttaattaataaggaccaga 105  Q
    |||||||||||||||| |||| |||||||||| ||||||||||    
T  57505 aggaccagagcactctggattaatttaattaagaaggaccaga 57547  T

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Target: scaffold0098 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 28347 - 28269
Alignment:
Q  97 aggaccagattgttctgcagaataaataaattaaataacaatataatattaaaagttagtataggaccaaagcactctggat 178  Q
    ||||||||| | ||||| ||||| | ||||||||| ||   ||||||||||| ||||| |||||||||| ||||||||||||    
T  28347 aggaccagaatattctggagaatgattaaattaaaaaa---tataatattaacagttaatataggaccagagcactctggat 28269  T

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