View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13032_high_11 (Length: 318)

Name: NF13032_high_11
Description: NF13032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13032_high_11
NF13032_high_11
[»] chr7 (13 HSPs)
chr7 (1-302)||(5078932-5079233)
chr7 (29-139)||(32097238-32097345)
chr7 (4-139)||(44057651-44057787)
chr7 (6-99)||(4088910-4089003)
chr7 (4-134)||(35850474-35850607)
chr7 (71-138)||(32501867-32501935)
chr7 (14-139)||(39136135-39136262)
chr7 (92-149)||(16562775-16562833)
chr7 (92-149)||(16602829-16602887)
chr7 (71-139)||(31929978-31930047)
chr7 (71-139)||(10599178-10599246)
chr7 (84-139)||(30833226-30833281)
chr7 (91-139)||(41137693-41137741)
[»] chr3 (18 HSPs)
chr3 (1-114)||(26187325-26187438)
chr3 (4-114)||(54918102-54918212)
chr3 (9-113)||(12931355-12931459)
chr3 (9-138)||(26244625-26244753)
chr3 (9-138)||(26243923-26244054)
chr3 (52-139)||(13762698-13762785)
chr3 (9-108)||(26121762-26121861)
chr3 (91-139)||(50038308-50038357)
chr3 (91-138)||(33194168-33194215)
chr3 (42-84)||(46160735-46160777)
chr3 (69-138)||(54677383-54677453)
chr3 (91-139)||(2662616-2662665)
chr3 (91-139)||(4392160-4392209)
chr3 (71-139)||(42939933-42940002)
chr3 (91-139)||(44648540-44648589)
chr3 (95-139)||(50646251-50646296)
chr3 (96-139)||(36844884-36844928)
chr3 (92-139)||(50088454-50088502)
[»] chr5 (11 HSPs)
chr5 (8-104)||(32535317-32535413)
chr5 (9-81)||(10437460-10437532)
chr5 (4-79)||(39691065-39691140)
chr5 (89-139)||(36296269-36296320)
chr5 (91-138)||(39059773-39059820)
chr5 (91-139)||(4967552-4967601)
chr5 (91-139)||(7316992-7317041)
chr5 (91-139)||(29653653-29653702)
chr5 (91-139)||(15776618-15776666)
chr5 (91-138)||(34171130-34171178)
chr5 (71-139)||(42978186-42978254)
[»] chr8 (16 HSPs)
chr8 (4-129)||(37109429-37109554)
chr8 (29-138)||(7421529-7421639)
chr8 (13-106)||(45192075-45192168)
chr8 (14-139)||(9610198-9610325)
chr8 (29-139)||(26432105-26432213)
chr8 (9-139)||(41178296-41178427)
chr8 (17-102)||(25264069-25264154)
chr8 (42-106)||(32336821-32336885)
chr8 (33-103)||(2271049-2271119)
chr8 (91-138)||(7612463-7612511)
chr8 (91-139)||(14234358-14234406)
chr8 (91-149)||(7839412-7839471)
chr8 (89-139)||(4989443-4989493)
chr8 (91-139)||(17920920-17920969)
chr8 (91-139)||(35052435-35052484)
chr8 (89-132)||(6116143-6116187)
[»] chr2 (12 HSPs)
chr2 (4-139)||(6247685-6247821)
chr2 (9-82)||(18248750-18248823)
chr2 (4-82)||(15524260-15524338)
chr2 (1-84)||(1198781-1198864)
chr2 (29-139)||(40373477-40373592)
chr2 (89-139)||(10580995-10581045)
chr2 (29-138)||(32063677-32063787)
chr2 (4-87)||(44195015-44195097)
chr2 (91-140)||(1381713-1381763)
chr2 (91-139)||(2459737-2459786)
chr2 (46-115)||(34456543-34456612)
chr2 (91-139)||(32228151-32228199)
[»] chr6 (3 HSPs)
chr6 (4-115)||(5008416-5008527)
chr6 (93-139)||(9940612-9940659)
chr6 (91-139)||(34519265-34519314)
[»] chr4 (11 HSPs)
chr4 (18-140)||(1019159-1019281)
chr4 (9-104)||(39009431-39009526)
chr4 (8-101)||(42541672-42541767)
chr4 (91-139)||(51434399-51434448)
chr4 (91-141)||(52848198-52848249)
chr4 (69-106)||(37451362-37451399)
chr4 (91-138)||(25231140-25231188)
chr4 (91-149)||(11364180-11364239)
chr4 (91-140)||(31917920-31917969)
chr4 (91-149)||(33033034-33033091)
chr4 (91-139)||(50203042-50203089)
[»] chr1 (17 HSPs)
chr1 (4-121)||(46298885-46299002)
chr1 (69-138)||(42724599-42724669)
chr1 (71-139)||(13408383-13408452)
chr1 (91-139)||(30292904-30292953)
chr1 (91-138)||(24483354-24483401)
chr1 (71-138)||(52066406-52066473)
chr1 (95-140)||(26201097-26201143)
chr1 (90-139)||(2610967-2611016)
chr1 (91-139)||(12002210-12002259)
chr1 (60-140)||(12124966-12125047)
chr1 (91-139)||(44024509-44024558)
chr1 (91-139)||(48025392-48025441)
chr1 (46-138)||(6596500-6596592)
chr1 (91-138)||(9552469-9552517)
chr1 (42-139)||(43358289-43358388)
chr1 (91-139)||(46045938-46045986)
chr1 (65-129)||(52293346-52293410)
[»] scaffold0246 (1 HSPs)
scaffold0246 (23-73)||(15374-15424)
[»] scaffold0123 (1 HSPs)
scaffold0123 (42-138)||(28236-28333)
[»] scaffold0096 (1 HSPs)
scaffold0096 (51-103)||(47723-47775)
[»] scaffold0039 (1 HSPs)
scaffold0039 (91-139)||(75439-75487)


Alignment Details
Target: chr7 (Bit Score: 278; Significance: 1e-155; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 5078932 - 5079233
Alignment:
Q  1 tgcaatgttttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcatttta 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5078932 tgcaatgttttgaaagtagtgttcacacaattaattagactgtacaattggaaatcaaataataattctacattgaaaagtgtaaataatattcatttta 5079031  T
Q  101 aaacaattcttttttgttaaacgacactcattttaaaacaatgagagtaaaagatacgagtgttagacaaacatattacagtccaatcccgtaagtaatc 200  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5079032 aaacaattcttttttgttaaacgacacttattttaaaacagtgagagtaaaagatacgagtgttagacaaacatattacagtccaatcccgtaagtaatc 5079131  T
Q  201 ttgattgataactgcagagagacattgttaggccgggacttgcatttgaatatgagactcgtcacttatttgtatttaaggcgtatgtgtcttacaatta 300  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5079132 ttgattgataactgcagagagacattattaggccgggacttgcatttgaatatgagactcgtcacttatctgtatttaaggcgtatgtgtcttacaatta 5079231  T
Q  301 aa 302  Q
    ||    
T  5079232 aa 5079233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 32097238 - 32097345
Alignment:
Q  29 aattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaacaattcttttttgttaaacgacact 128  Q
    |||||||||||  ||| |||||||| ||||||||||||||||||||||||||||   || |||||||||||||||||||| |||||  | ||||||||||    
T  32097238 aattaattagagggtataattggaagtaaaataataattctacattgaaaagtg---atgatattcattttaaaacaattttttttactaaaacgacact 32097334  T
Q  129 cattttaaaac 139  Q
    |||||||||||    
T  32097335 cattttaaaac 32097345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 139
Target Start/End: Original strand, 44057651 - 44057787
Alignment:
Q  4 aatgttttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaa 103  Q
    ||||||||| ||||||||||| | |||| ||||| |  |||||||||||| |||||||||||||||||||||||||||| || | | ||||||||| |||    
T  44057651 aatgttttggaagtagtgtactctcaataaattaaagggtacaattggaagtaaaataataattctacattgaaaagtgcaagtgacattcattttgaaa 44057750  T
Q  104 caattctttttt-gttaaacgacactcattttaaaac 139  Q
    ||||| ||||||  | |||||||||||||||| ||||    
T  44057751 caatttttttttactaaaacgacactcattttgaaac 44057787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 4088910 - 4089003
Alignment:
Q  6 tgttttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcatttt 99  Q
    ||||||| ||||||||||||| ||||||||||||   ||||||||||| |||||||||||||||||||||||||||| || ||| |||||||||    
T  4088910 tgttttggaagtagtgtacactcaattaattagaggatacaattggaagtaaaataataattctacattgaaaagtgcaactaacattcatttt 4089003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 35850474 - 35850607
Alignment:
Q  4 aatgttttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataat--tctacattgaaaagtgtaaataatattcattttaa 101  Q
    |||| |||| ||||||||||||| ||||||||||||  |||||||||||| ||  ||  | ||  |||||||||||||||| |||| | ||||||||| |    
T  35850474 aatgctttggaagtagtgtacactcaattaattagagggtacaattggaagtagcattttcatattctacattgaaaagtgcaaatgacattcattttga 35850573  T
Q  102 aacaattcttttt-tgttaaacgacactcatttt 134  Q
    ||||||| ||||| | | ||||||||||||||||    
T  35850574 aacaattttttttgtctaaaacgacactcatttt 35850607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 32501867 - 32501935
Alignment:
Q  71 cattgaaaagtgtaaataatattcattttaaaacaattcttttttgtt-aaacgacactcattttaaaa 138  Q
    ||||||||| || || | ||||| |||||||||||||| ||||||||| ||||||||||||||||||||    
T  32501867 cattgaaaactgaaagtgatatttattttaaaacaatttttttttgttaaaacgacactcattttaaaa 32501935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 39136135 - 39136262
Alignment:
Q  14 aagtagtgtacacacaattaattagactgtaca-attggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaac-aattctt 111  Q
    ||||||||||||| ||||||||| ||  ||||  ||| ||| ||||||||||||| ||| |||||||||  || | | |||||||||||||| |||| ||    
T  39136135 aagtagtgtacactcaattaattggagggtaccgattagaagtaaaataataattttacgttgaaaagtacaagtgacattcattttaaaacaaattttt 39136234  T
Q  112 ttttgttaaacgacactcattttaaaac 139  Q
    ||||   |||||| ||||||||||||||    
T  39136235 tttttaaaaacgaaactcattttaaaac 39136262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 16562775 - 16562833
Alignment:
Q  92 ttcattttaaaacaattcttttttgtt-aaacgacactcattttaaaacaatgagagta 149  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||||||||||  |||||||    
T  16562775 ttcattttaaaacaattattttttgttaaaatgacactcattttaaaacagagagagta 16562833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 16602887 - 16602829
Alignment:
Q  92 ttcattttaaaacaattcttttttgtt-aaacgacactcattttaaaacaatgagagta 149  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||||||||||  |||||||    
T  16602887 ttcattttaaaacaattattttttgttaaaatgacactcattttaaaacagagagagta 16602829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 139
Target Start/End: Original strand, 31929978 - 31930047
Alignment:
Q  71 cattgaaaagtgtaaataatattcattttaaaacaattcttttttgt-taaa-cgacactcattttaaaac 139  Q
    ||||||||| || |||||||||||||||||||| |||| |||||||| |||| ||||||| ||||||||||    
T  31929978 cattgaaaactgaaaataatattcattttaaaataatt-ttttttgtctaaagcgacacttattttaaaac 31930047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 10599246 - 10599178
Alignment:
Q  71 cattgaaaagtgtaaataatattcattttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    ||||||||| || || | ||||||||||| ||||| || |||||||||||| ||||||||||||||||||    
T  10599246 cattgaaaactgaaagtgatattcattttgaaacattt-ttttttgttaaaacgacactcattttaaaac 10599178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 30833226 - 30833281
Alignment:
Q  84 aaataatattcattttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    |||| ||||||||||||||| |||| ||||||| |||| ||||||||||||||||||    
T  30833226 aaatgatattcattttaaaataatt-ttttttgctaaagcgacactcattttaaaac 30833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 41137741 - 41137693
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaacgacactcattttaaaac 139  Q
    ||||||| | |||||||| ||||| || |||||||||||||||||||||    
T  41137741 attcattgtgaaacaattttttttggtaaaacgacactcattttaaaac 41137693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 4e-29; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 26187325 - 26187438
Alignment:
Q  1 tgcaatgttttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcatttta 100  Q
    ||||||||||||  |||||||||||||||||||||||||  ||||||||| || |||||||||||||||| |||||||||| ||| | | ||||||||||    
T  26187325 tgcaatgttttggtagtagtgtacacacaattaattagagagtacaattgtaagtaaaataataattctatattgaaaagtataagtgacattcatttta 26187424  T
Q  101 aaacaattcttttt 114  Q
    |||||||| |||||    
T  26187425 aaacaatttttttt 26187438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 54918212 - 54918102
Alignment:
Q  4 aatgttttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaa 103  Q
    ||||||||| ||||||||||||| ||||||||||||  |||||||||||| |||||||||||| ||||||||||||||| || | |  |||||||| |||    
T  54918212 aatgttttggaagtagtgtacactcaattaattagagcgtacaattggaagtaaaataataatcctacattgaaaagtgcaagtgactttcattttgaaa 54918113  T
Q  104 caattcttttt 114  Q
    ||||| |||||    
T  54918112 caatttttttt 54918102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 12931355 - 12931459
Alignment:
Q  9 tttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaacaatt 108  Q
    |||||||||||| ||||| |||||||||| |  ||| ||||| || ||||||||||||| ||| || ||||||| || | | ||||||||||||||||||    
T  12931355 tttgaaagtagtttacactcaattaattatagggtaaaattgtaagtaaaataataattatacgttaaaaagtgcaagtgacattcattttaaaacaatt 12931454  T
Q  109 ctttt 113  Q
     ||||    
T  12931455 ttttt 12931459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 26244625 - 26244753
Alignment:
Q  9 tttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaacaatt 108  Q
    ||||||| |||||||||  |||| |||||||  ||||||||| || |||||||||| |||||||||||||| ||| | | | ||| ||||||||| ||||    
T  26244625 tttgaaaatagtgtacattcaataaattagagggtacaattgaaagtaaaataatatttctacattgaaaactgtcagtgacatttattttaaaataatt 26244724  T
Q  109 cttttttgttaaacgacactcattttaaaa 138  Q
     ||||   | | ||||||||||||||||||    
T  26244725 -ttttaactaatacgacactcattttaaaa 26244753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 26243923 - 26244054
Alignment:
Q  9 tttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaacaatt 108  Q
    ||||||| ||||||||   |||| |||||||  ||||||||| || |||||||||| || ||||||||||| ||| | ||  ||| ||||||||||||||    
T  26243923 tttgaaaatagtgtaccttcaataaattagagggtacaattgaaagtaaaataatatttttacattgaaaactgtcagtaccatttattttaaaacaatt 26244022  T
Q  109 ctttttt--gttaaacgacactcattttaaaa 138  Q
     ||| ||   | ||||||||||||||||||||    
T  26244023 ttttattaattaaaacgacactcattttaaaa 26244054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 13762785 - 13762698
Alignment:
Q  52 aaataaaataataattctacattgaaaagtgtaaataatattcattttaaaacaattcttttttgttaaacgacactcattttaaaac 139  Q
    |||||||| ||||||||||| |||||||||| || | | ||||||||| ||||| || |||||  | |||||||||| ||||||||||    
T  13762785 aaataaaacaataattctacgttgaaaagtgcaagtgacattcattttgaaacatttttttttactaaaacgacactaattttaaaac 13762698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 26121762 - 26121861
Alignment:
Q  9 tttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaacaatt 108  Q
    ||||||| |||||||||  |||| |||||||  ||||||||| || |||||||||| || ||||||||||| ||| | | | ||| ||||||||||||||    
T  26121762 tttgaaaatagtgtacattcaataaattagagggtacaattgaaagtaaaataatatttttacattgaaaactgtcagtgacatttattttaaaacaatt 26121861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 50038308 - 50038357
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  50038308 attcattttaaaacaatttttttttgctaaagcgacactcattttaaaac 50038357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 33194168 - 33194215
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaacgacactcattttaaaa 138  Q
    |||||||||||||||||| |||||  | ||||||||||||||||||||    
T  33194168 attcattttaaaacaattttttttgctaaaacgacactcattttaaaa 33194215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 46160777 - 46160735
Alignment:
Q  42 gtacaattggaaataaaataataattctacattgaaaagtgta 84  Q
    |||||||||||| ||||||||||||| ||||| ||||||||||    
T  46160777 gtacaattggaagtaaaataataattatacatggaaaagtgta 46160735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 54677453 - 54677383
Alignment:
Q  69 tacattgaaaagtgtaaataatattcattttaaaacaattct-tttttgttaaacgacactcattttaaaa 138  Q
    |||||||||||||| |||| | |||||| ||||||||||| | |||| || ||| ||||||||||||||||    
T  54677453 tacattgaaaagtgaaaatgacattcatcttaaaacaattttattttggtaaaatgacactcattttaaaa 54677383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 2662616 - 2662665
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||||||||    
T  2662616 attcattttaaaacaaatctttttggctaaagcgacactcattttaaaac 2662665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 4392209 - 4392160
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||||||    
T  4392209 attcattttgaaacaattattttttgctaaaacgacactcattttaaaac 4392160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 42940002 - 42939933
Alignment:
Q  71 cattgaaaagtgtaaataatattcattttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    ||||||||| || |||| | ||||||||| |||||| |  ||||||||||| ||||||||||||||||||    
T  42940002 cattgaaaaatgaaaatgacattcattttgaaacaaattatttttgttaaagcgacactcattttaaaac 42939933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 44648540 - 44648589
Alignment:
Q  91 attcattttaaaacaattcttttttg-ttaaacgacactcattttaaaac 139  Q
    |||||||||||||||||| ||||||| | |||||||||||||||| ||||    
T  44648540 attcattttaaaacaatttttttttgctaaaacgacactcattttgaaac 44648589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 50646251 - 50646296
Alignment:
Q  95 attttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    ||||| |||||||| |||||||||||| ||||||||||||||||||    
T  50646251 attttgaaacaatttttttttgttaaaacgacactcattttaaaac 50646296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 36844884 - 36844928
Alignment:
Q  96 ttttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    |||| |||||||| |||||||||||| ||||||||||||||||||    
T  36844884 ttttgaaacaattattttttgttaaaacgacactcattttaaaac 36844928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 50088454 - 50088502
Alignment:
Q  92 ttcattttaaaacaattcttttttg-ttaaacgacactcattttaaaac 139  Q
    ||||||||||||||||| ||||||| | |||||||||||||||| ||||    
T  50088454 ttcattttaaaacaatttttttttgctaaaacgacactcattttgaaac 50088502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 8e-24; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 32535317 - 32535413
Alignment:
Q  8 ttttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaac 104  Q
    ||||| ||||||||||| | ||||||| ||||  |||||||||||||||||||||||||| ||||||||||||||||| | | ||||||||||||||    
T  32535317 ttttgtaagtagtgtacgctcaattaactagaaggtacaattggaaataaaataataattttacattgaaaagtgtaagtgacattcattttaaaac 32535413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 10437460 - 10437532
Alignment:
Q  9 tttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagt 81  Q
    |||| ||||||||||||| ||||||||||||   ||||||||||| |||||||||||||||||||||||||||    
T  10437460 tttggaagtagtgtacactcaattaattagaggatacaattggaagtaaaataataattctacattgaaaagt 10437532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 39691140 - 39691065
Alignment:
Q  4 aatgttttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaa 79  Q
    ||||||||  ||||||||||| |  |||||||||||  ||||||||| || |||||||||||||||||||||||||    
T  39691140 aatgttttagaagtagtgtacgcttaattaattagaaggtacaattgaaagtaaaataataattctacattgaaaa 39691065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 139
Target Start/End: Original strand, 36296269 - 36296320
Alignment:
Q  89 atattcattttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    |||||||||||||||||||| ||||||  |||| ||||||||||||||||||    
T  36296269 atattcattttaaaacaatttttttttactaaagcgacactcattttaaaac 36296320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 39059820 - 39059773
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaacgacactcattttaaaa 138  Q
    ||||||||| |||||||| ||||| ||||| |||||||||||||||||    
T  39059820 attcattttgaaacaattttttttagttaagcgacactcattttaaaa 39059773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 4967552 - 4967601
Alignment:
Q  91 attcattttaaaacaattcttttttgtt-aaacgacactcattttaaaac 139  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||| ||||    
T  4967552 attcattttaaaacaatttttttttgttaaaatgacactcattttgaaac 4967601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 7317041 - 7316992
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||||||    
T  7317041 attcattttgaaacaatttttttttgctaaagcgacactcattttaaaac 7316992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 29653653 - 29653702
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    |||||||||  ||||||| |||||||||||| ||||||||||||||||||    
T  29653653 attcattttgcaacaatttttttttgttaaaacgacactcattttaaaac 29653702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 15776618 - 15776666
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaacgacactcattttaaaac 139  Q
    |||||||||||||||||| |||||  | ||| |||||||||||||||||    
T  15776618 attcattttaaaacaattttttttactaaaatgacactcattttaaaac 15776666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 34171178 - 34171130
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaa 138  Q
    |||||||||||||||||| ||||||  |||| |||||||||||||||||    
T  34171178 attcattttaaaacaattttttttttataaaacgacactcattttaaaa 34171130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 139
Target Start/End: Original strand, 42978186 - 42978254
Alignment:
Q  71 cattgaaaagtgtaaataatattcattttaaaacaattcttttttgttaaacgacactcattttaaaac 139  Q
    ||||||||| || || | ||||||||||||||||| || ||||   | |||||||||||||||||||||    
T  42978186 cattgaaaactgaaagtgatattcattttaaaacattttttttagctaaaacgacactcattttaaaac 42978254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 5e-22; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 37109429 - 37109554
Alignment:
Q  4 aatgttttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaa 103  Q
    ||||||||| |||||||||| || ||||||||||||   |||||||| || |||||||||||||||||||||||||||  || | | |||||||||||||    
T  37109429 aatgttttggaagtagtgtatactcaattaattagatgatacaattgaaagtaaaataataattctacattgaaaagtacaagtgacattcattttaaaa 37109528  T
Q  104 caattcttttttgttaaacgacactc 129  Q
    ||||| | |||| | |||| ||||||    
T  37109529 caattttcttttctaaaacaacactc 37109554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 7421529 - 7421639
Alignment:
Q  29 aattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaacaattcttttttg-ttaaacgacac 127  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||||||| | | ||||||||||||| |||| | ||| | | |||||| ||    
T  7421529 aattaattagagagtacaattggaagtaaaataataattctacattaaaaagtgtaactgacattcattttaaaataattttatttcgctaaaacgatac 7421628  T
Q  128 tcattttaaaa 138  Q
    |||||||||||    
T  7421629 tcattttaaaa 7421639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 45192075 - 45192168
Alignment:
Q  13 aaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaacaa 106  Q
    |||||||||||||| |||||||||| |  ||||||||| |||||||||| ||||| |||||| ||||||| || | ||||||||||||||||||    
T  45192075 aaagtagtgtacactcaattaattatagggtacaattgaaaataaaatagtaattatacattaaaaagtgcaagtgatattcattttaaaacaa 45192168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 9610325 - 9610198
Alignment:
Q  14 aagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaaca--attctt 111  Q
    ||||||||||||| |||| |||||||  ||| ||||| || |||||||||||||||||||| ||||||  || | ||||||||||||||| |  ||| ||    
T  9610325 aagtagtgtacactcaatcaattagatggtataattgtaagtaaaataataattctacattaaaaagtccaagtgatattcattttaaaataatattttt 9610226  T
Q  112 ttttgttaaacgacactcattttaaaac 139  Q
    || | | ||| |||||||||||||||||    
T  9610225 ttatctgaaatgacactcattttaaaac 9610198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 26432213 - 26432105
Alignment:
Q  29 aattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaacaattcttttttgttaaacgacact 128  Q
    |||||||||||  |||||||||||| ||||||||||||| || ||||||||||| || | ||||| ||||||||| |||| ||||   | ||| ||||||    
T  26432213 aattaattaga--gtacaattggaagtaaaataataattttatattgaaaagtggaagtgatatttattttaaaataatttttttaattaaaatgacact 26432116  T
Q  129 cattttaaaac 139  Q
    |||||||||||    
T  26432115 cattttaaaac 26432105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 41178296 - 41178427
Alignment:
Q  9 tttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaacaatt 108  Q
    |||| ||||| ||||||| |||||||||| |  ||| |||||||| |||||||||||||||||||||||||||| ||   |  |||||| | ||||||||    
T  41178296 tttggaagtattgtacactcaattaattatagggtaaaattggaagtaaaataataattctacattgaaaagtgcaagcgacgttcattctgaaacaatt 41178395  T
Q  109 cttttttg-ttaaacgacactcattttaaaac 139  Q
     ||||| | | |||||||||||||||| ||||    
T  41178396 ttttttagctaaaacgacactcattttgaaac 41178427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 25264069 - 25264154
Alignment:
Q  17 tagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaa 102  Q
    |||||||||| |||||||||| |  |||||||||  | ||||||||| ||||||||||||||| ||||| | | ||||||||||||    
T  25264069 tagtgtacactcaattaattatagggtacaattgtcagtaaaataatgattctacattgaaaaatgtaagtgacattcattttaaa 25264154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 32336821 - 32336885
Alignment:
Q  42 gtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaacaa 106  Q
    ||||||||| || ||||||||||||||||||||||||| ||||| | | ||| ||||||||||||    
T  32336821 gtacaattgaaagtaaaataataattctacattgaaaattgtaattcacattaattttaaaacaa 32336885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 2271119 - 2271049
Alignment:
Q  33 aattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaa 103  Q
    |||||||  ||||||||| |||||||||||||||||| |||| ||||||| || | | |||||||||||||    
T  2271119 aattagagggtacaattgaaaataaaataataattctgcattaaaaagtgcaagttacattcattttaaaa 2271049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 7612511 - 7612463
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaa 138  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  7612511 attcattttaaaacaatttttttttgttaaagtgacactcattttaaaa 7612463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 14234358 - 14234406
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaacgacactcattttaaaac 139  Q
    |||||||||||||||||| |||||  | |||||||||||||||||||||    
T  14234358 attcattttaaaacaattttttttgctaaaacgacactcattttaaaac 14234406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 7839471 - 7839412
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaacaatgagagta 149  Q
    ||||||||| |||||||| ||||||| |||| |||||||||||||||||||  |||||||    
T  7839471 attcattttgaaacaatttttttttgctaaaacgacactcattttaaaacagagagagta 7839412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 4989493 - 4989443
Alignment:
Q  89 atattcattttaaaacaattcttttttgttaaacgacactcattttaaaac 139  Q
    ||||||||||| |||||||| |||||  | |||||||||||||||||||||    
T  4989493 atattcattttgaaacaattttttttactaaaacgacactcattttaaaac 4989443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 17920969 - 17920920
Alignment:
Q  91 attcattttaaaacaattcttttttg-ttaaacgacactcattttaaaac 139  Q
    |||||||||||||||||| ||||||| | |||||||| ||||||||||||    
T  17920969 attcattttaaaacaatttttttttgctaaaacgacattcattttaaaac 17920920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 35052484 - 35052435
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||| ||||    
T  35052484 attcattttaaaacaatttttttttgctaaagcgacactcattttgaaac 35052435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 6116143 - 6116187
Alignment:
Q  89 atattcattttaaaacaattcttttttg-ttaaacgacactcatt 132  Q
    |||||||||||||||||||| ||||||| | ||||||||||||||    
T  6116143 atattcattttaaaacaatttttttttgctaaaacgacactcatt 6116187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 139
Target Start/End: Complemental strand, 6247821 - 6247685
Alignment:
Q  4 aatgttttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaa 103  Q
    |||| |||| ||||| ||||||| ||||||||||||  ||||| |||||| |||||| ||| ||||||||||||||| | |  | | |||||||||||||    
T  6247821 aatgctttggaagtaatgtacactcaattaattagagggtacagttggaagtaaaatcatatttctacattgaaaagcgcaggtgacattcattttaaaa 6247722  T
Q  104 caattcttttttg-ttaaacgacactcattttaaaac 139  Q
    ||||| ||||| |   |||||||||||||||||||||    
T  6247721 caattttttttggcgaaaacgacactcattttaaaac 6247685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 18248823 - 18248750
Alignment:
Q  9 tttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtg 82  Q
    |||| |||||||||||||  |||||||||||  |||||| || |||||||||||||||| ||||||||||||||    
T  18248823 tttggaagtagtgtacacttaattaattagagggtacaactgaaaataaaataataattttacattgaaaagtg 18248750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 15524338 - 15524260
Alignment:
Q  4 aatgttttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtg 82  Q
    |||| |||| ||| ||||||| | |||||||||| |  ||||||||| |||||||||||||||||| ||||||||||||    
T  15524338 aatgatttggaagcagtgtacgctcaattaattaaagggtacaattgaaaataaaataataattctgcattgaaaagtg 15524260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1198781 - 1198864
Alignment:
Q  1 tgcaatgttttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgta 84  Q
    ||||||||||| |||||||||||||| || | ||||| |   || ||||| || |||||||||||||||||||| |||||||||    
T  1198781 tgcaatgttttaaaagtagtgtacactcactaaattaaaggatataattgaaagtaaaataataattctacattaaaaagtgta 1198864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 40373592 - 40373477
Alignment:
Q  29 aattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaacaattcttttttgtt-----aaacg 123  Q
    |||||||||||  |||||||| ||| ||||||||||||| |||||||||||||| || | ||||| ||||| ||| | || |||||| ||     |||||    
T  40373592 aattaattagagagtacaattagaagtaaaataataattttacattgaaaagtgcaagtgatatttattttgaaagattttttttttttttattaaaacg 40373493  T
Q  124 acactcattttaaaac 139  Q
    ||||||||||| ||||    
T  40373492 acactcatttttaaac 40373477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 139
Target Start/End: Original strand, 10580995 - 10581045
Alignment:
Q  89 atattcattttaaaacaattcttttttgttaaacgacactcattttaaaac 139  Q
    ||||||||||| |||||||| ||||| | ||||||||||||||||||||||    
T  10580995 atattcattttgaaacaattttttttggctaaacgacactcattttaaaac 10581045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 32063677 - 32063787
Alignment:
Q  29 aattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaacaattcttttt-tgttaaacgacac 127  Q
    |||||||||||  | ||||||| || |||||||||||||| | |||||||||||||||| | ||||||||  ||| |||| ||||| | | |||||| ||    
T  32063677 aattaattagagggaacaattgaaagtaaaataataattcaatattgaaaagtgtaaatgacattcatttcgaaataattttttttatttaaaacgagac 32063776  T
Q  128 tcattttaaaa 138  Q
    | |||||||||    
T  32063777 ttattttaaaa 32063787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 44195015 - 44195097
Alignment:
Q  4 aatgttttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaat 87  Q
    |||| ||| ||||||||||  ||  |||||||||||  |||||| || || ||||||||||||||||||||||||||| |||||    
T  44195015 aatgctttaaaagtagtgtggacttaattaattagag-gtacaactgaaagtaaaataataattctacattgaaaagtttaaat 44195097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 1381763 - 1381713
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaaca 140  Q
    |||||||||||||||||| ||||||  |||| |||||||||||||||||||    
T  1381763 attcattttaaaacaatttttttttactaaagcgacactcattttaaaaca 1381713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 2459786 - 2459737
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    |||||||||||||||||| ||||||| |||| | ||||||||||||||||    
T  2459786 attcattttaaaacaatttttttttgctaaagcaacactcattttaaaac 2459737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 115
Target Start/End: Original strand, 34456543 - 34456612
Alignment:
Q  46 aattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaacaattctttttt 115  Q
    |||| ||| |||||||||||||| ||||| |||| ||||| | || |||||||||||| |||| ||||||    
T  34456543 aatttgaagtaaaataataattccacattaaaaaatgtaagtgattttcattttaaaataattttttttt 34456612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 32228151 - 32228199
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaacgacactcattttaaaac 139  Q
    ||||||||||||||||||  ||||  | |||||||||||||||||||||    
T  32228151 attcattttaaaacaatttattttgctaaaacgacactcattttaaaac 32228199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 5008416 - 5008527
Alignment:
Q  4 aatgttttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaa 103  Q
    |||| |||||||| ||||||| |  |||||||||||  ||||||||| || |||||||||||||||||||||||||||| || | | ||| ||||| |||    
T  5008416 aatgctttgaaagcagtgtacgcttaattaattagatggtacaattgaaagtaaaataataattctacattgaaaagtgcaagtgacattaattttgaaa 5008515  T
Q  104 caattctttttt 115  Q
     |||| ||||||    
T  5008516 taattgtttttt 5008527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 9940659 - 9940612
Alignment:
Q  93 tcattttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    |||||||||||||||| |||||||||||| ||||||||||||| ||||    
T  9940659 tcattttaaaacaatttttttttgttaaagcgacactcattttgaaac 9940612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 34519265 - 34519314
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||||||    
T  34519265 attcattttgaaacaatttttttttgctaaaacgacactcattttaaaac 34519314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 1019159 - 1019281
Alignment:
Q  18 agtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaacaattcttttttgt 117  Q
    ||||||||| ||||| ||||||  || ||||||||| || ||||||| ||||||||||||||||| |||| | ||| ||||| |||||||||||||| |     
T  1019159 agtgtacactcaattgattagagggtgcaattggaagtataataatagttctacattgaaaagtgcaaatgacatt-attttgaaacaattctttttggc 1019257  T
Q  118 taaa-cgacactcattttaaaaca 140  Q
    |||| ||||||| ||||| |||||    
T  1019258 taaatcgacacttattttgaaaca 1019281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 39009526 - 39009431
Alignment:
Q  9 tttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaac 104  Q
    |||| ||||||||||  | |||||||||| |  ||||||||||| ||||||||||||||||||||||||||||| || | | ||||||||| ||||    
T  39009526 tttggaagtagtgtatgctcaattaattaaagggtacaattggagataaaataataattctacattgaaaagtgcaagtgacattcattttgaaac 39009431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 42541767 - 42541672
Alignment:
Q  8 ttttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctac--attgaaaagtgtaaataatattcattttaa 101  Q
    ||||| ||||||||||||| ||||||||||||  ||| || || ||||||||||||||||||||  ||||||||||| || | | |||||||||||    
T  42541767 ttttggaagtagtgtacactcaattaattagagggtaaaactgaaaataaaataataattctacatattgaaaagtgcaagtgacattcattttaa 42541672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 51434399 - 51434448
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  51434399 attcattttaaaacaatttttttttgttaaagcgacactcattttaaaac 51434448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 52848198 - 52848249
Alignment:
Q  91 attcattttaaaacaattcttttttg-ttaaacgacactcattttaaaacaa 141  Q
    |||||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  52848198 attcattttaaaacaatttttttttgctaaaacgacactcattttaaaacaa 52848249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 37451399 - 37451362
Alignment:
Q  69 tacattgaaaagtgtaaataatattcattttaaaacaa 106  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  37451399 tacattgaaaagtgtaaataacattcattttaaaacaa 37451362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 25231188 - 25231140
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaa 138  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||||||    
T  25231188 attcattttaaaacaatttttttttgctaaagcgacactcattttaaaa 25231140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 11364239 - 11364180
Alignment:
Q  91 attcattttaaaacaattcttttttgtt-aaacgacactcattttaaaacaatgagagta 149  Q
    |||||| ||||||||||||||||| ||| |||||||||||||||| ||||  ||||||||    
T  11364239 attcatcttaaaacaattctttttagttaaaacgacactcattttgaaacggtgagagta 11364180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 31917969 - 31917920
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaacgacactcattttaaaaca 140  Q
    |||||||||||||||||| |||| | | |||||||||| |||||||||||    
T  31917969 attcattttaaaacaatttttttatctaaaacgacacttattttaaaaca 31917920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 33033091 - 33033034
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaacaatgagagta 149  Q
    ||||||||||||||||||  ||||||||||| |||| ||||||||||||| | |||||||    
T  33033091 attcattttaaaacaatt--tttttgttaaaacgacgctcattttaaaacgaagagagta 33033034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 50203089 - 50203042
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaacgacactcattttaaaac 139  Q
    |||||||||||||||||| |||||  | |||||||||||||||||||||    
T  50203089 attcattttaaaacaatt-tttttgctaaaacgacactcattttaaaac 50203042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 46298885 - 46299002
Alignment:
Q  4 aatgttttgaaagtagtgtacacacaattaattagactgtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaa 103  Q
    |||||||| |||| |||||||||  ||||||| |||   || ||||| || |||| |||||||| ||||||||||| ||||| | |||||||||||||||    
T  46298885 aatgttttaaaagcagtgtacactgaattaatgagatgataaaattgaaattaaactaataattttacattgaaaaatgtaagtgatattcattttaaaa 46298984  T
Q  104 caattcttttttgttaaa 121  Q
     |||| ||| ||||||||    
T  46298985 taattttttattgttaaa 46299002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 42724669 - 42724599
Alignment:
Q  69 tacattgaaaagtgtaaataatattcattttaaaacaattcttttttgtt-aaacgacactcattttaaaa 138  Q
    |||||| ||||||| |||| |||||||||||||||||||| | ||||||| ||| |||| |||||||||||    
T  42724669 tacattaaaaagtgaaaatgatattcattttaaaacaattttattttgttaaaatgacattcattttaaaa 42724599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 139
Target Start/End: Original strand, 13408383 - 13408452
Alignment:
Q  71 cattgaaaagtgtaaataatattcattttaaaacaa-ttcttttttgttaaacgacactcattttaaaac 139  Q
    ||||||||| || || ||| |||||||||||||||| || ||||| || |||||||||||||||||||||    
T  13408383 cattgaaaactgaaagtaaaattcattttaaaacaatttgtttttggtaaaacgacactcattttaaaac 13408452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 30292953 - 30292904
Alignment:
Q  91 attcattttaaaacaattcttttttgtt-aaacgacactcattttaaaac 139  Q
    |||||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  30292953 attcattttaaaacaattttttttggttgaaacgacactcattttaaaac 30292904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 24483401 - 24483354
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaacgacactcattttaaaa 138  Q
    ||||||||| |||||||| |||||| | ||||||||||||||||||||    
T  24483401 attcattttgaaacaatttttttttctaaaacgacactcattttaaaa 24483354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 52066406 - 52066473
Alignment:
Q  71 cattgaaaagtgtaaataatattcattttaaaacaattcttttttgttaaacgacactcattttaaaa 138  Q
    ||||||||| || |||||||||| ||| | ||||| || ||||||| |||| ||||||||||||||||    
T  52066406 cattgaaaattgaaaataatatttattatgaaacattttttttttgctaaaagacactcattttaaaa 52066473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 26201143 - 26201097
Alignment:
Q  95 attttaaaacaattcttttttgttaaa-cgacactcattttaaaaca 140  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||    
T  26201143 attttgaaacaatttttttttgttaaaacgacactcattttaaaaca 26201097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 2610967 - 2611016
Alignment:
Q  90 tattcattttaaaacaattcttttttgttaaacgacactcattttaaaac 139  Q
    ||||||||| ||||||||| |||||  | |||||||||||||||||||||    
T  2610967 tattcatttcaaaacaattttttttgctaaaacgacactcattttaaaac 2611016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 12002259 - 12002210
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    |||||||||||||||||| ||||| | |||| ||||||||||||||||||    
T  12002259 attcattttaaaacaattttttttagctaaaacgacactcattttaaaac 12002210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 140
Target Start/End: Original strand, 12124966 - 12125047
Alignment:
Q  60 taataattctacattgaaaagtgtaaataatattcattttaaaacaattcttttttgttaaa-cgacactcattttaaaaca 140  Q
    |||||||| ||||||||||||||||| ||| ||| ||||| ||||||   ||| ||||||||  |||| |||||||||||||    
T  12124966 taataattttacattgaaaagtgtaattaacatttattttgaaacaaaattttattgttaaagtgacattcattttaaaaca 12125047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 44024558 - 44024509
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||||||    
T  44024558 attcattttgaaacaatttttttttgctaaagcgacactcattttaaaac 44024509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 48025392 - 48025441
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaac 139  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||||||    
T  48025392 attcattttgaaacaatttttttttgctaaaacgacactcattttaaaac 48025441  T

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Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 6596592 - 6596500
Alignment:
Q  46 aattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaacaattcttttttgttaaacgacactcattttaaaa 138  Q
    |||||||| |||||||||||||||||||| || |||| || | | ||| ||||||||| | || |||||  | |||||||| | |||||||||    
T  6596592 aattggaagtaaaataataattctacattaaacagtgcaagtgacatttattttaaaatatttttttttattaaaacgacatttattttaaaa 6596500  T

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Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 9552469 - 9552517
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaa-cgacactcattttaaaa 138  Q
    |||||||||||||||||| |||||| |||||  ||||||||||||||||    
T  9552469 attcattttaaaacaatttttttttattaaagtgacactcattttaaaa 9552517  T

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Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 43358289 - 43358388
Alignment:
Q  42 gtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaacaattctttttt--gttaaacgacactcattttaaaac 139  Q
    ||||||||| |||||||||  || |  | |||||||||||| || | |||||||| || |||||||| ||||||   | |||||||||||||||||||||    
T  43358289 gtacaattgaaaataaaatgttattattgcattgaaaagtgaaagtgatattcatattgaaacaattttttttttgctaaaacgacactcattttaaaac 43358388  T

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Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 46045986 - 46045938
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaacgacactcattttaaaac 139  Q
    ||||||||| |||||||| |||||  | |||||||||||||||||||||    
T  46045986 attcattttgaaacaattttttttactaaaacgacactcattttaaaac 46045938  T

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Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 52293410 - 52293346
Alignment:
Q  65 attctacattgaaaagtgtaaataatattcattttaaaacaattcttttttgttaaacgacactc 129  Q
    |||||||||||||||||  |||| | ||||||| |||||||| |  |||||| ||||||||||||    
T  52293410 attctacattgaaaagtaaaaatgacattcattctaaaacaaatagtttttgctaaacgacactc 52293346  T

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Target: scaffold0246 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 15424 - 15374
Alignment:
Q  23 acacacaattaattagactgtacaattggaaataaaataataattctacat 73  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  15424 acactcaattaattagacagtacaattggaagtaaaataataattctacat 15374  T

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Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 138
Target Start/End: Original strand, 28236 - 28333
Alignment:
Q  42 gtacaattggaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaacaattcttttttgttaa-acgacactcattttaaaa 138  Q
    |||||||  ||| ||||||||||||| |||||||||||||| || | | ||||||||||||| |||  ||||| ||||| |||||||||| |||||||    
T  28236 gtacaatgagaagtaaaataataattatacattgaaaagtgcaagtgacattcattttaaaataatgttttttggttaacacgacactcactttaaaa 28333  T

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Target: scaffold0096 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 47723 - 47775
Alignment:
Q  51 gaaataaaataataattctacattgaaaagtgtaaataatattcattttaaaa 103  Q
    |||| ||||||| |||||||  |||||||||  ||||||||||||||||||||    
T  47723 gaaaaaaaataagaattctaagttgaaaagtaaaaataatattcattttaaaa 47775  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 75439 - 75487
Alignment:
Q  91 attcattttaaaacaattcttttttgttaaacgacactcattttaaaac 139  Q
    ||||||||| ||||||||||||||  | |||||||||| ||||||||||    
T  75439 attcattttgaaacaattctttttgctaaaacgacacttattttaaaac 75487  T

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