View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13032_high_15 (Length: 250)

Name: NF13032_high_15
Description: NF13032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13032_high_15
NF13032_high_15
[»] chr7 (39 HSPs)
chr7 (20-235)||(5078480-5078695)
chr7 (20-226)||(30756913-30757121)
chr7 (22-226)||(37837552-37837758)
chr7 (20-226)||(13797026-13797233)
chr7 (20-226)||(24350938-24351145)
chr7 (21-226)||(38051161-38051367)
chr7 (38-202)||(22742745-22742910)
chr7 (20-226)||(3394262-3394468)
chr7 (20-226)||(47590103-47590308)
chr7 (23-230)||(12141398-12141607)
chr7 (38-226)||(28476030-28476217)
chr7 (37-180)||(35132757-35132901)
chr7 (37-180)||(1749284-1749426)
chr7 (79-226)||(34899701-34899850)
chr7 (80-211)||(9450246-9450379)
chr7 (20-213)||(19404864-19405056)
chr7 (72-212)||(39171698-39171842)
chr7 (23-213)||(48061214-48061406)
chr7 (20-226)||(42978397-42978607)
chr7 (20-210)||(48316922-48317114)
chr7 (24-167)||(1769338-1769482)
chr7 (20-221)||(4529868-4530069)
chr7 (20-226)||(25067875-25068079)
chr7 (80-202)||(41553555-41553677)
chr7 (80-202)||(41553900-41554022)
chr7 (80-202)||(41554245-41554367)
chr7 (20-226)||(11343583-11343796)
chr7 (76-213)||(26610852-26610988)
chr7 (82-226)||(40993032-40993179)
chr7 (76-169)||(25255083-25255176)
chr7 (20-159)||(8013626-8013767)
chr7 (72-125)||(19296719-19296772)
chr7 (77-175)||(24770101-24770200)
chr7 (78-226)||(39228862-39229012)
chr7 (80-117)||(45350007-45350044)
chr7 (77-164)||(23425490-23425576)
chr7 (80-123)||(38798636-38798679)
chr7 (83-155)||(24069607-24069680)
chr7 (127-175)||(48930677-48930725)
[»] chr1 (49 HSPs)
chr1 (20-213)||(44543063-44543255)
chr1 (21-213)||(49626701-49626896)
chr1 (20-226)||(1742071-1742279)
chr1 (20-211)||(18939112-18939303)
chr1 (77-211)||(9341572-9341707)
chr1 (58-226)||(16161660-16161829)
chr1 (72-202)||(32394841-32394972)
chr1 (20-228)||(31983970-31984178)
chr1 (80-190)||(45789415-45789525)
chr1 (20-172)||(12634957-12635110)
chr1 (20-157)||(34528509-34528645)
chr1 (103-226)||(36775811-36775934)
chr1 (23-210)||(11462558-11462747)
chr1 (83-210)||(23291752-23291881)
chr1 (20-175)||(34878417-34878573)
chr1 (72-213)||(45415401-45415543)
chr1 (23-125)||(10776657-10776759)
chr1 (20-226)||(32679192-32679401)
chr1 (79-230)||(940214-940365)
chr1 (61-213)||(15434982-15435133)
chr1 (37-180)||(48749997-48750140)
chr1 (45-190)||(19060717-19060864)
chr1 (23-175)||(29738781-29738935)
chr1 (80-221)||(31317601-31317743)
chr1 (20-168)||(568936-569085)
chr1 (20-226)||(7337757-7337965)
chr1 (23-213)||(5983629-5983821)
chr1 (136-211)||(47132807-47132883)
chr1 (20-164)||(34413247-34413393)
chr1 (49-167)||(31692618-31692736)
chr1 (136-198)||(37720243-37720305)
chr1 (28-125)||(3228068-3228165)
chr1 (45-191)||(15492109-15492254)
chr1 (141-226)||(8212004-8212089)
chr1 (72-212)||(21947726-21947868)
chr1 (20-110)||(24012866-24012956)
chr1 (77-226)||(35462131-35462283)
chr1 (72-113)||(7836975-7837016)
chr1 (79-175)||(14872488-14872587)
chr1 (20-97)||(47132705-47132781)
chr1 (94-214)||(13075742-13075863)
chr1 (83-175)||(34479346-34479438)
chr1 (77-164)||(20266178-20266264)
chr1 (77-164)||(27872615-27872701)
chr1 (136-202)||(1602023-1602089)
chr1 (78-112)||(15836041-15836075)
chr1 (95-175)||(26535260-26535341)
chr1 (20-113)||(50625277-50625369)
chr1 (141-213)||(31918902-31918973)
[»] scaffold0009 (1 HSPs)
scaffold0009 (20-226)||(58173-58381)
[»] chr2 (48 HSPs)
chr2 (20-226)||(12648018-12648226)
chr2 (20-213)||(32448729-32448923)
chr2 (22-202)||(24461238-24461418)
chr2 (72-230)||(3308788-3308947)
chr2 (77-211)||(43397229-43397364)
chr2 (20-226)||(4098900-4099108)
chr2 (22-175)||(6436407-6436561)
chr2 (34-172)||(37994086-37994224)
chr2 (20-213)||(31788253-31788449)
chr2 (20-226)||(7448045-7448252)
chr2 (20-213)||(7646269-7646465)
chr2 (22-213)||(11985338-11985530)
chr2 (38-175)||(18107883-18108020)
chr2 (20-212)||(19597676-19597867)
chr2 (76-212)||(19062461-19062598)
chr2 (20-166)||(28718104-28718248)
chr2 (20-180)||(10237354-10237514)
chr2 (77-213)||(35220182-35220317)
chr2 (72-226)||(9169353-9169507)
chr2 (20-226)||(18763265-18763473)
chr2 (26-226)||(27097501-27097701)
chr2 (77-226)||(4041689-4041839)
chr2 (72-175)||(4778602-4778707)
chr2 (20-226)||(6358971-6359185)
chr2 (58-175)||(14955358-14955476)
chr2 (58-202)||(29574750-29574897)
chr2 (72-226)||(36943216-36943374)
chr2 (136-175)||(42714653-42714692)
chr2 (79-152)||(14423149-14423223)
chr2 (136-213)||(36691789-36691866)
chr2 (78-212)||(38445022-38445157)
chr2 (20-125)||(7678075-7678180)
chr2 (76-171)||(1415418-1415514)
chr2 (20-112)||(20145914-20146006)
chr2 (77-158)||(19029070-19029151)
chr2 (136-213)||(29279678-29279755)
chr2 (136-226)||(31128875-31128964)
chr2 (72-175)||(37876743-37876848)
chr2 (20-125)||(12677493-12677598)
chr2 (136-211)||(4904255-4904330)
chr2 (22-97)||(37416501-37416576)
chr2 (78-117)||(39311054-39311093)
chr2 (136-206)||(14423237-14423307)
chr2 (78-208)||(17994831-17994960)
chr2 (141-211)||(3435808-3435880)
chr2 (77-110)||(11833338-11833371)
chr2 (133-198)||(23933745-23933809)
chr2 (145-226)||(39310947-39311028)
[»] chr6 (36 HSPs)
chr6 (43-226)||(32191825-32192011)
chr6 (20-226)||(30493322-30493525)
chr6 (20-226)||(1523196-1523397)
chr6 (20-213)||(12170283-12170478)
chr6 (76-226)||(3913668-3913820)
chr6 (77-226)||(30776511-30776661)
chr6 (20-226)||(33053262-33053470)
chr6 (20-226)||(23128406-23128614)
chr6 (81-211)||(34018409-34018541)
chr6 (20-200)||(27097737-27097912)
chr6 (58-213)||(545851-546006)
chr6 (94-212)||(8102580-8102701)
chr6 (67-210)||(30608625-30608767)
chr6 (37-213)||(14801624-14801803)
chr6 (78-211)||(32059755-32059890)
chr6 (25-221)||(68100-68297)
chr6 (60-202)||(1933814-1933960)
chr6 (57-175)||(14801032-14801151)
chr6 (58-153)||(20220735-20220830)
chr6 (58-153)||(22114719-22114814)
chr6 (22-125)||(31852371-31852474)
chr6 (72-226)||(606044-606200)
chr6 (89-167)||(34222653-34222731)
chr6 (33-121)||(7976366-7976453)
chr6 (103-175)||(22571361-22571433)
chr6 (143-212)||(127583-127652)
chr6 (20-118)||(4010704-4010802)
chr6 (72-167)||(30894476-30894573)
chr6 (23-213)||(7515309-7515501)
chr6 (77-164)||(7876164-7876250)
chr6 (77-164)||(33109706-33109792)
chr6 (146-226)||(7976274-7976355)
chr6 (41-175)||(26588613-26588747)
chr6 (171-212)||(8072068-8072109)
chr6 (72-125)||(29320059-29320112)
chr6 (80-172)||(28981027-28981118)
[»] chr3 (55 HSPs)
chr3 (20-226)||(21289915-21290121)
chr3 (20-218)||(50194385-50194585)
chr3 (58-226)||(16235244-16235413)
chr3 (20-171)||(629055-629208)
chr3 (20-226)||(10232857-10233064)
chr3 (20-175)||(33579655-33579811)
chr3 (21-226)||(20465064-20465267)
chr3 (20-226)||(7546397-7546601)
chr3 (20-226)||(40487112-40487319)
chr3 (78-213)||(9797636-9797774)
chr3 (37-211)||(29921856-29922033)
chr3 (37-211)||(29971009-29971186)
chr3 (26-213)||(6954803-6954992)
chr3 (79-226)||(36461525-36461674)
chr3 (20-226)||(45568539-45568746)
chr3 (20-211)||(47895938-47896131)
chr3 (20-226)||(9998253-9998461)
chr3 (58-202)||(53508047-53508192)
chr3 (20-213)||(21431412-21431606)
chr3 (37-213)||(8914508-8914686)
chr3 (23-98)||(14859287-14859362)
chr3 (86-168)||(3785706-3785788)
chr3 (58-217)||(42460571-42460731)
chr3 (23-209)||(12050759-12050947)
chr3 (37-180)||(51303780-51303923)
chr3 (72-226)||(10108077-10108230)
chr3 (20-110)||(38545622-38545712)
chr3 (72-226)||(40556550-40556706)
chr3 (20-175)||(47042197-47042354)
chr3 (72-213)||(54148827-54148972)
chr3 (20-226)||(31271901-31272109)
chr3 (20-226)||(35865026-35865235)
chr3 (22-212)||(7449010-7449201)
chr3 (22-212)||(7457152-7457343)
chr3 (72-213)||(12149891-12150032)
chr3 (77-211)||(43488699-43488834)
chr3 (72-226)||(10229313-10229470)
chr3 (87-175)||(29249098-29249186)
chr3 (20-113)||(43016642-43016737)
chr3 (72-213)||(48650841-48650985)
chr3 (77-127)||(32701342-32701392)
chr3 (26-175)||(52923262-52923411)
chr3 (77-213)||(23800017-23800154)
chr3 (20-125)||(38142358-38142463)
chr3 (144-220)||(44960052-44960128)
chr3 (20-88)||(53808096-53808164)
chr3 (144-211)||(27706342-27706409)
chr3 (77-164)||(46934512-46934598)
chr3 (144-221)||(20987898-20987975)
chr3 (78-175)||(52116156-52116253)
chr3 (77-158)||(4178434-4178514)
chr3 (77-122)||(4821651-4821696)
chr3 (141-201)||(22290847-22290908)
chr3 (79-157)||(4396495-4396572)
chr3 (85-166)||(45424669-45424746)
[»] chr4 (57 HSPs)
chr4 (22-226)||(51888308-51888516)
chr4 (20-221)||(2520584-2520787)
chr4 (78-213)||(36161579-36161711)
chr4 (20-171)||(47320551-47320703)
chr4 (20-189)||(9643184-9643359)
chr4 (20-226)||(26633765-26633972)
chr4 (77-226)||(32766378-32766529)
chr4 (37-180)||(27651772-27651916)
chr4 (21-198)||(22038921-22039099)
chr4 (72-226)||(4142849-4143004)
chr4 (20-226)||(13633921-13634130)
chr4 (72-226)||(22611043-22611198)
chr4 (77-226)||(35348170-35348322)
chr4 (24-230)||(43510010-43510216)
chr4 (72-213)||(53810887-53811030)
chr4 (20-226)||(5119145-5119354)
chr4 (20-226)||(19853606-19853813)
chr4 (20-153)||(22063948-22064082)
chr4 (21-213)||(9178165-9178355)
chr4 (39-211)||(47158054-47158227)
chr4 (20-226)||(36204482-36204682)
chr4 (23-172)||(22300655-22300805)
chr4 (20-213)||(21686348-21686542)
chr4 (23-175)||(22558609-22558764)
chr4 (20-175)||(18935594-18935749)
chr4 (133-226)||(52978746-52978838)
chr4 (61-211)||(12199802-12199951)
chr4 (21-213)||(9165153-9165344)
chr4 (78-213)||(56040753-56040890)
chr4 (20-175)||(9713708-9713871)
chr4 (20-180)||(36194520-36194681)
chr4 (72-124)||(48257647-48257699)
chr4 (21-126)||(48351376-48351482)
chr4 (77-168)||(10359661-10359751)
chr4 (78-173)||(24099217-24099315)
chr4 (144-226)||(33920984-33921066)
chr4 (136-189)||(9634599-9634653)
chr4 (145-230)||(17949414-17949499)
chr4 (145-230)||(17953266-17953351)
chr4 (94-206)||(37030145-37030256)
chr4 (127-221)||(6155327-6155422)
chr4 (79-220)||(45418392-45418535)
chr4 (79-175)||(37188700-37188795)
chr4 (160-202)||(7393215-7393258)
chr4 (80-208)||(10259008-10259136)
chr4 (127-213)||(29120470-29120556)
chr4 (77-168)||(43444277-43444367)
chr4 (45-124)||(55227827-55227906)
chr4 (79-108)||(13863164-13863193)
chr4 (79-157)||(18048754-18048831)
chr4 (20-52)||(21223712-21223744)
chr4 (20-52)||(21248483-21248515)
chr4 (20-52)||(21248638-21248670)
chr4 (22-98)||(22806350-22806425)
chr4 (80-124)||(29121876-29121920)
chr4 (136-211)||(29961033-29961109)
chr4 (136-172)||(38166381-38166417)
[»] scaffold0127 (1 HSPs)
scaffold0127 (20-226)||(15279-15486)
[»] chr5 (35 HSPs)
chr5 (20-226)||(39567082-39567289)
chr5 (58-226)||(2979407-2979576)
chr5 (20-226)||(38597584-38597791)
chr5 (20-226)||(6012232-6012440)
chr5 (20-175)||(14211020-14211173)
chr5 (104-226)||(19103568-19103691)
chr5 (20-226)||(13007015-13007223)
chr5 (72-210)||(38007196-38007336)
chr5 (25-213)||(9113832-9114022)
chr5 (20-226)||(28541007-28541208)
chr5 (72-226)||(31391847-31392007)
chr5 (74-202)||(34945262-34945391)
chr5 (20-175)||(7036014-7036171)
chr5 (136-213)||(24229891-24229969)
chr5 (20-211)||(26878190-26878380)
chr5 (20-190)||(8985062-8985239)
chr5 (80-226)||(8096591-8096738)
chr5 (76-198)||(10332673-10332799)
chr5 (72-213)||(6216733-6216880)
chr5 (58-170)||(8088363-8088475)
chr5 (72-226)||(26825267-26825424)
chr5 (136-226)||(14726555-14726646)
chr5 (80-211)||(15571332-15571465)
chr5 (20-226)||(25979944-25980152)
chr5 (136-211)||(11977044-11977121)
chr5 (83-181)||(13421792-13421891)
chr5 (79-211)||(14082482-14082614)
chr5 (134-168)||(35631805-35631839)
chr5 (78-159)||(11767683-11767763)
chr5 (134-211)||(34881640-34881717)
chr5 (72-117)||(35850623-35850667)
chr5 (78-230)||(41630350-41630500)
chr5 (66-122)||(7930027-7930083)
chr5 (78-175)||(10722617-10722717)
chr5 (20-48)||(41630297-41630325)
[»] scaffold0603 (1 HSPs)
scaffold0603 (37-230)||(7521-7715)
[»] chr8 (38 HSPs)
chr8 (20-213)||(1239504-1239703)
chr8 (20-212)||(15344095-15344289)
chr8 (20-212)||(15433160-15433354)
chr8 (20-212)||(15524464-15524658)
chr8 (77-226)||(18890798-18890948)
chr8 (58-212)||(8826035-8826192)
chr8 (77-190)||(8443649-8443764)
chr8 (20-125)||(1236888-1236993)
chr8 (20-226)||(7883333-7883540)
chr8 (20-157)||(8980986-8981125)
chr8 (20-226)||(24099350-24099560)
chr8 (20-175)||(31013714-31013871)
chr8 (58-199)||(41896341-41896480)
chr8 (72-202)||(3240216-3240350)
chr8 (20-208)||(27110575-27110764)
chr8 (77-212)||(20559850-20559987)
chr8 (77-212)||(20571412-20571549)
chr8 (78-181)||(5046597-5046701)
chr8 (22-173)||(37971086-37971236)
chr8 (21-175)||(33214775-33214930)
chr8 (66-226)||(7677375-7677534)
chr8 (141-230)||(40619161-40619250)
chr8 (149-226)||(5333346-5333423)
chr8 (83-175)||(26469340-26469430)
chr8 (79-175)||(37663217-37663316)
chr8 (97-202)||(14585565-14585672)
chr8 (20-175)||(45445955-45446111)
chr8 (20-220)||(17693712-17693913)
chr8 (72-125)||(14916332-14916384)
chr8 (20-125)||(25191261-25191366)
chr8 (20-121)||(29617656-29617757)
chr8 (20-153)||(10377486-10377620)
chr8 (144-211)||(27498471-27498538)
chr8 (23-213)||(23230436-23230627)
chr8 (69-213)||(14545008-14545154)
chr8 (78-164)||(2655749-2655834)
chr8 (20-97)||(39655300-39655377)
chr8 (76-164)||(35580336-35580423)
[»] scaffold0445 (1 HSPs)
scaffold0445 (20-226)||(1131-1339)
[»] scaffold0026 (1 HSPs)
scaffold0026 (20-226)||(71958-72166)
[»] scaffold0017 (1 HSPs)
scaffold0017 (79-213)||(32854-32991)
[»] scaffold0088 (1 HSPs)
scaffold0088 (20-229)||(50573-50784)
[»] scaffold0888 (1 HSPs)
scaffold0888 (20-180)||(1815-1976)
[»] scaffold0064 (1 HSPs)
scaffold0064 (20-176)||(19186-19337)
[»] scaffold0634 (1 HSPs)
scaffold0634 (72-213)||(8353-8494)
[»] scaffold0136 (2 HSPs)
scaffold0136 (136-213)||(10149-10225)
scaffold0136 (111-213)||(37925-38027)
[»] scaffold0039 (1 HSPs)
scaffold0039 (58-175)||(92925-93043)
[»] scaffold0492 (1 HSPs)
scaffold0492 (78-112)||(12761-12795)
[»] scaffold0154 (1 HSPs)
scaffold0154 (24-117)||(25124-25215)
[»] scaffold0087 (1 HSPs)
scaffold0087 (72-125)||(25526-25579)


Alignment Details
Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 20 - 235
Target Start/End: Complemental strand, 5078695 - 5078480
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||    
T  5078695 agtgagagaaacttcaacttctctctaagttctctttatctttcactcattaaggaagggtgattttaggtcattttttgacctagaatcacccctctgc 5078596  T
Q  120 atctttctccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttg 219  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||    
T  5078595 atctttctctccattatttcgatctaaataagtgatttttacatatatcaagtttttcttttgtgttttttcgtaatttcgtcatctaagtgcgttgttg 5078496  T
Q  220 tgatgtttgtccccgt 235  Q
    ||||||||||||||||    
T  5078495 tgatgtttgtccccgt 5078480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 30757121 - 30756913
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||| ||||||||||||||||||||||| || || || ||||||  ||||  |||| |||||||||||||| |||||||||| ||||||||||| ||| |    
T  30757121 agtgggagaaacttcaacttctctctaaattttctttctctttcgttcatcgaggaggggtggttttaggtaattttttgacctagaatcacccctctac 30757022  T
Q  120 atctttct--ccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttg 216  Q
    |||||| |  |||  || |||| |||||||||||||||||| |||| ||||| | |||| ||||| |||||||| ||||||||||| ||||||||||  |    
T  30757021 atcttttttccccttttctttcaatctaaataagtgattttcacatctatcatgtttttccttttgtgtttttt-gtgatttcgtcgtctaagtgcggcg 30756923  T
Q  217 ttgtgatgtt 226  Q
    ||||| ||||    
T  30756922 ttgtgttgtt 30756913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 226
Target Start/End: Complemental strand, 37837758 - 37837552
Alignment:
Q  22 tgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcat 121  Q
    ||||||||||| ||||||||||||||  | |  || || |||  ||||| |||| ||||||||||||||||||||||||| ||||||||||| ||| |||    
T  37837758 tgagagaaactccaacttctctctaaactttatttctccttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctacat 37837659  T
Q  122 c-tttctccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttg 219  Q
    | ||| ||||  || |||| ||||||||||||| |||  |||||||| ||| |||| ||||| |||||||| |||||||| |||||||||||||  ||||    
T  37837658 cttttttcccttttctttcaatctaaataagtggtttacacatatattaagttttttcttttgtgtttttttgtgatttcatcatctaagtgcggcgttg 37837559  T
Q  220 tgatgtt 226  Q
    || ||||    
T  37837558 tgttgtt 37837552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 13797233 - 13797026
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||||||||||||| ||| || || || || |||  ||||  |||| || ||||||||||||||||||| || ||||||||||| ||| |    
T  13797233 agtgagagaaacttcaacttctctttaaattttctttctcgttcgttcatcgaggatggatggttttaggtcattttttaacctagaatcacccctctac 13797134  T
Q  120 atctttctcccc-attatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgt 217  Q
    |||||| |||||  || |||| || ||||||||||||||| |||| ||||||| |||| ||||| ||||||||  |||||||||| ||||||||||  ||    
T  13797133 atctttttccccttttctttcaatttaaataagtgattttaacatctatcaagtttttccttttgtgtttttt-atgatttcgtcgtctaagtgcggcgt 13797035  T
Q  218 tgtgatgtt 226  Q
    |||| ||||    
T  13797034 tgtgttgtt 13797026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 24351145 - 24350938
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||    ||||||| |||||| || |  ||| ||||||||  |||| ||||| |||||||||| |||||||| ||||||||||| | |||    
T  24351145 agtgagagaaactctgtcttctctttaagttttcttcctctctcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacccctgtgc 24351046  T
Q  120 atc-tttctccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgtt 218  Q
    ||| ||| | ||| || |||| |||||||||||||||||| ||||| |||||||||| ||||  |||||||| ||||||||||| ||| ||||||  |||    
T  24351045 atccttttttccctttctttcaatctaaataagtgattttcacatacatcaagtttttctttcgtgttttttagtgatttcgtcgtcttagtgcgacgtt 24350946  T
Q  219 gtgatgtt 226  Q
    ||| ||||    
T  24350945 gtgttgtt 24350938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 226
Target Start/End: Complemental strand, 38051367 - 38051161
Alignment:
Q  21 gtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgca 120  Q
    |||| ||| |||||| ||||||| ||||||||| || |  ||||||||||||||| ||||||||||||||||| |||| || ||||||||||||||| ||    
T  38051367 gtgatagagacttcaccttctctttaagttctctttcttcttcactcattaaggaggggtggttttaggtcatattttaacctagaatcacccatctaca 38051268  T
Q  121 tctttctccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttg 219  Q
    || || ||||| || |||  ||||||||| ||| |||  | |||||||||| ||||  |||| |||| |||| |||||||||||| | | |||| |||||    
T  38051267 tcattttcccctttcttttaatctaaatatgtggtttcaatatatatcaagtttttttttttgtgttatttcatgatttcgtcatttgaatgcgatgttg 38051168  T
Q  220 tgatgtt 226  Q
    || ||||    
T  38051167 tgttgtt 38051161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 38 - 202
Target Start/End: Original strand, 22742745 - 22742910
Alignment:
Q  38 ttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttct-ccccattat 136  Q
    ||||||||||||| || |  ||||||| ||||  |||| ||||| |||||||||| ||||| |  ||||||||||| ||||||||||| | |||| || |    
T  22742745 ttctctctaagttttcttcctctttcattcatcgaggaggggtgattttaggtcaatttttaatctagaatcacccctctgcatcttttttcccctttct 22742844  T
Q  137 ttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtc 202  Q
    ||| |||||||||||||||||| ||||| |||||||||| ||||  | ||||||||||||||||||    
T  22742845 ttcaatctaaataagtgattttcacatacatcaagtttttctttcgttttttttcgtgatttcgtc 22742910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 3394262 - 3394468
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||| | ||||||  | |||||||||| || | |||||||| || ||||  |||||||||| ||||||||| ||| || ||||||| || ||     
T  3394262 agtgagagaaattccaactttccactaagttctctttctttttcactctttgaggagtggtggttttacgtcatttttggacatataatcacctatttgt 3394361  T
Q  120 atctttctccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgtttt-ttcgtgatttcgtcatctaagtgcgttgtt 218  Q
    |||||| ||||| || ||||||||||||||||||||||| || ||||| |||||||  | || |||||| ||||||||||| || ||| |||||| ||||    
T  3394362 atctttttcccctttctttcgatctaaataagtgattttcacgtatatgaagtttt-ttcttgtgttttcttcgtgatttcatcgtctgagtgcggtgtt 3394460  T
Q  219 gtgatgtt 226  Q
    ||| ||||    
T  3394461 gtgttgtt 3394468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 47590103 - 47590308
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||| | |||||||||||||| || || || || |||  ||||  |||| ||||| |||||||||||||||  ||| |||||||||| ||| |    
T  47590103 agtgagagaaattccaacttctctctaaattttctttctcattcgttcatagaggaggggtgattttaggtcatttttgaact-agaatcacccctctac 47590201  T
Q  120 atctttctccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgtt 218  Q
    || ||| |||| ||| |||| ||||||||||||| |||| |||||||||||| |||| ||||| |||||||| ||||||||||  ||||||||||  |||    
T  47590202 atttttttccctattctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgtttttt-gtgatttcgttgtctaagtgcggcgtt 47590300  T
Q  219 gtgatgtt 226  Q
    ||| ||||    
T  47590301 gtgttgtt 47590308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 12141607 - 12141398
Alignment:
Q  23 gagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc 122  Q
    |||||||||| ||||||||||||||  | || || || |||  ||||  | || ||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  12141607 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaagaggggtggttttaggtcattttttgacatagaatcacccctctacatc 12141508  T
Q  123 tttctcccc---attatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgtt 218  Q
    ||| | |||    ||||||| ||||||||||||| |||| |||| ||||||| |||| ||||| |||||||  ||||||||||| ||||||||||  |||    
T  12141507 ttttttcccttttttatttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttt--gtgatttcgtcgtctaagtgcggcgtt 12141410  T
Q  219 gtgatgtttgtc 230  Q
     || ||||||||    
T  12141409 ttgttgtttgtc 12141398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 226
Target Start/End: Original strand, 28476030 - 28476217
Alignment:
Q  38 ttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatt 137  Q
    ||||||||||||| || |  ||||||||  ||  |||| ||||| |||||||||| |||||||| |||||||||||  |   || ||| || || || ||    
T  28476030 ttctctctaagttttcttcctctttcacatatcgaggaggggtgattttaggtcaatttttgacctagaatcaccccgcat-atttttttctcctttctt 28476128  T
Q  138 tcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    || |||||||||||||||||| ||||| |||||||||| ||||| |||||||||||||||||||| ||| ||||||  |||||| ||||    
T  28476129 tcaatctaaataagtgattttcacatacatcaagtttttcttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgtt 28476217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 35132757 - 35132901
Alignment:
Q  37 cttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc-tttctccccatta 135  Q
    |||||||||||||| || |  ||||||||||||  |||| ||||| |||||||||| |||||||| ||||||||||| ||| |||| ||| ||||| ||     
T  35132757 cttctctctaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacccctctacatcttttttcccctttc 35132856  T
Q  136 tttcgatctaaataagtgatttttacatatatcaagttttacttt 180  Q
    |||  |||||||||||||||||| ||||| |||||||||| ||||    
T  35132857 ttttaatctaaataagtgattttcacatacatcaagtttttcttt 35132901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 1749426 - 1749284
Alignment:
Q  37 cttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattat 136  Q
    |||||||||||||| || |  ||||||||||||  |||| ||||| |||||||||| |||||||| |||||||||||  || ||||||| | ||| || |    
T  1749426 cttctctctaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcaccc-gcttcatcttttttccctttct 1749328  T
Q  137 ttcgatctaaataagtgatttttacatatatcaagttttacttt 180  Q
    ||| |||||||||||||||||| ||||| |||||||||| ||||    
T  1749327 ttcaatctaaataagtgattttcacatacatcaagtttttcttt 1749284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 226
Target Start/End: Complemental strand, 34899850 - 34899701
Alignment:
Q  79 gtggttttaggtcattttttgacttagaatcacccatctgcatc--tttctccccattatttcgatctaaataagtgatttttacatatatcaag-tttt 175  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||  ||| ||||  || |||| ||||||||||||| |||| |||| ||||||| ||||    
T  34899850 gtggttttaggtcattttttgacctagaatcacccctctacatctttttttcccttttctttcaatctaaataagtggttttcacatctatcaagttttt 34899751  T
Q  176 acttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
     ||||| |||||||| ||||||||||| ||||||||||  |||||| ||||    
T  34899750 ccttttgtgtttttt-gtgatttcgtcgtctaagtgcggcgttgtgttgtt 34899701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 211
Target Start/End: Complemental strand, 9450379 - 9450246
Alignment:
Q  80 tggttttaggtcattttttgacttagaatcacccatctgcatctt-tctcccc-attatttcgatctaaataagtgatttttacatatatcaagttt-ta 176  Q
    |||||||||||||||||||||| ||||||||||||||| |||||| | |||||  || |||| |||||||||||||||||| |||| |||| ||||| |     
T  9450379 tggttttaggtcattttttgacctagaatcacccatctacatcttgtttccccttttctttcaatctaaataagtgattttcacatctatctagtttctc 9450280  T
Q  177 cttttatgttttttcgtgatttcgtcatctaagtg 211  Q
    ||||| |||||||| ||||||||||| ||||||||    
T  9450279 cttttgtgtttttt-gtgatttcgtcgtctaagtg 9450246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 19405056 - 19404864
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| |||||||||||||| |  || || || || | ||||| || | ||||||||||||||||||||||||| ||||||||||| ||| |    
T  19405056 agtgagagaaactccaacttctctctaaatcttctttctccttaattcattgagaaggggtggttttaggtcattttttgacctagaatcacccctctac 19404957  T
Q  120 atctttctccccatta-tttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    |||||| |  || ||  |||| ||||||||||||| |||| ||||| |||||||||| | ||| ||  |||| ||||||||||| ||||||||||    
T  19404956 atctttttttccttttctttcaatctaaataagtggttttcacataaatcaagtttttccttt-tg-attttagtgatttcgtcgtctaagtgcg 19404864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 212
Target Start/End: Complemental strand, 39171842 - 39171698
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttct---ccccattatttcgatctaaataagtgatttttacatatatc 168  Q
    |||| |||||||| |||||||||||||||| ||||||||||| ||| ||||||| |   ||   || |||||||||||||||||| |||| | || ||||    
T  39171842 aggaggggtggttgtaggtcattttttgacctagaatcacccctctacatcttttttttcctttttctttcgatctaaataagtggttttcatatctatc 39171743  T
Q  169 aagttttac-ttttatgttttttcgtgatttcgtcatctaagtgc 212  Q
    ||||||| | |||| |||||||| |||||||||||||||||||||    
T  39171742 aagtttttccttttgtgtttttttgtgatttcgtcatctaagtgc 39171698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 213
Target Start/End: Original strand, 48061214 - 48061406
Alignment:
Q  23 gagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc 122  Q
    |||||||||| ||||||||||||||  | || ||||| |||  ||||  ||||  ||||||||||||||||||||||||||||||||||||  || |||     
T  48061214 gagagaaactccaacttctctctaaactttctttatccttcgttcatcgaggagaggtggttttaggtcattttttgacttagaatcaccccactacata 48061313  T
Q  123 tttctcccc---attatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    ||| | |||    || |||| ||||||||||||| |||| |||| ||||||| |||| ||||| |||||||  ||||||||||| ||||||||||    
T  48061314 ttttttcccctttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttt--gtgatttcgtcgtctaagtgcg 48061406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 42978397 - 42978607
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||  |||||||||||||  | || || || |||  ||||  |||| ||||||||||||||||||||||||| ||||||||||  ||| |    
T  42978397 agtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccactctac 42978496  T
Q  120 atctttctccccattatt---tcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgtt 215  Q
    |||||| || ||  | ||   || ||||||||||||| |||| |||||||| ||| |||| ||||| |||| ||| ||||||||||| ||||||||||      
T  42978497 atctttttctccccttttcgatcaatctaaataagtggttttcacatatataaagtttttccttttgtgttcttttgtgatttcgtcgtctaagtgcggc 42978596  T
Q  216 gttgtgatgtt 226  Q
    |||||| ||||    
T  42978597 gttgtgttgtt 42978607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 210
Target Start/End: Complemental strand, 48317114 - 48316922
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||| |||||||  ||||||||||||| ||  | || || |||  |||| ||||| ||||||||||||||||||||| ||| ||||||||||| ||| |    
T  48317114 agtgaaagaaactctaacttctctctaaatttgctttctccttcgttcatcaaggaggggtggttttaggtcatttttggacctagaatcacccctctac 48317015  T
Q  120 atctttctcccc--attatttcgatctaaataagtgatttttacatatatc-aagttttacttttatgttttttcgtgatttcgtcatctaagt 210  Q
    |||||| |||||   || |||| || |||||||||| |||| |||| |||| || |||| ||||| |||||||| ||||||||||| |||||||    
T  48317014 atctttttcccccttttctttcaatttaaataagtggttttcacatctatcaaattttttcttttgtgtttttt-gtgatttcgtcgtctaagt 48316922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 1769482 - 1769338
Alignment:
Q  24 agagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgca-tc 122  Q
    |||||||||||||||||||| ||| || || |  |||||||| ||| |||||| |||||||||| |||||||||| | | |||||||||| | |||| |     
T  1769482 agagaaacttcaacttctctttaaattgtcttcttctttcacccatcaaggaatggtggttttacgtcattttttaaataagaatcacccttttgcattt 1769383  T
Q  123 tttctccccattatttcgatctaaataagtgatttttacatatat 167  Q
    ||| ||||| || ||||| |||||||| |||||||| ||| ||||    
T  1769382 tttttcccctttctttcgttctaaatatgtgattttcacacatat 1769338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 4529868 - 4530069
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||||| |||||||||||||  || || || |||| |||| || ||  |||| ||||||||||||||||||| ||||| || ||  || |    
T  4529868 agtgagagaaacttcaccttctctctaagtcttctttctccttcattcatcaaagagaggtgattttaggtcattttttgacatagaaccatcccgctac 4529967  T
Q  120 atctttct--ccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgt 217  Q
    |||||| |  || | || |||| |||||| |||||  |||| ||||||||||| |||| | ||| |||||||| ||||||||||| ||||||| || |||    
T  4529968 atcttttttccctctttctttcaatctaagtaagtatttttcacatatatcaaatttttc-tttgtgtttttt-gtgatttcgtcgtctaagtacggtgt 4530065  T
Q  218 tgtg 221  Q
    ||||    
T  4530066 tgtg 4530069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 25067875 - 25068079
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| || |||||| ||||||| || || ||||||| | ||  || | | ||||||||| ||||| ||||||| | ||||||||||| |||    
T  25067875 agtgagagaaactccaccttctcactaagttttctttttctttcatttatcgagaatgagtggttttatgtcatcttttgaccttgaatcacccatttgc 25067974  T
Q  120 atctttctccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttg 219  Q
    ||| || | |   || |||| |||||||||||||||||  |||||||  |||| || ||||| || ||||| |||||||| |||||| ||||||  ||||    
T  25067975 atcctttttctatttctttcaatctaaataagtgatttccacatata--aagtctttcttttgtgcttttttgtgatttcatcatctgagtgcggcgttg 25068072  T
Q  220 tgatgtt 226  Q
    || ||||    
T  25068073 tgttgtt 25068079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 202
Target Start/End: Complemental strand, 41553677 - 41553555
Alignment:
Q  80 tggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagt-tttact 178  Q
    |||||||||||||||||||||  ||||||||||  | ||||| ||| || |  || |||| ||||||||||| |||||  ||||||||||||| ||| ||    
T  41553677 tggttttaggtcattttttgatctagaatcaccattttgcatattt-tctcatttctttcaatctaaataagggatttccacatatatcaagtgttttct 41553579  T
Q  179 tttatgttttttcgtgatttcgtc 202  Q
    ||| ||||||||||||||||||||    
T  41553578 tttgtgttttttcgtgatttcgtc 41553555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 202
Target Start/End: Complemental strand, 41554022 - 41553900
Alignment:
Q  80 tggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagt-tttact 178  Q
    |||||||||||||||||||||  ||||||||||  | ||||| ||| || |  || |||| ||||||||||| |||||  ||||||||||||| ||| ||    
T  41554022 tggttttaggtcattttttgatctagaatcaccattttgcatattt-tctcatttctttcaatctaaataagggatttccacatatatcaagtgttttct 41553924  T
Q  179 tttatgttttttcgtgatttcgtc 202  Q
    ||| ||||||||||||||||||||    
T  41553923 tttgtgttttttcgtgatttcgtc 41553900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 202
Target Start/End: Complemental strand, 41554367 - 41554245
Alignment:
Q  80 tggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagt-tttact 178  Q
    |||||||||||||||||||||  ||||||||||  | ||||| ||| || |  || |||| ||||||||||| |||||  ||||||||||||| ||| ||    
T  41554367 tggttttaggtcattttttgatctagaatcaccattttgcatattt-tctcatttctttcaatctaaataagggatttccacatatatcaagtgttttct 41554269  T
Q  179 tttatgttttttcgtgatttcgtc 202  Q
    ||| ||||||||||||||||||||    
T  41554268 tttgtgttttttcgtgatttcgtc 41554245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 11343583 - 11343796
Alignment:
Q  20 agtgagagaaacttcaacttctct----ctaa--gttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcaccc 113  Q
    ||||||||||||||||||||||||    ||||  ||| || || |||||| |||||  || | ||||| |||||| | |||||||||| |||||||||||    
T  11343583 agtgagagaaacttcaacttctctaaaactaaaagttttctttctctttcgctcatcgagaaggggtgattttagtttattttttgacctagaatcaccc 11343682  T
Q  114 atctgcatctttctccccattatttcgatctaaataagtgattttta-catatatcaagt-tttacttttatgttttttcgtgatttcgtcatctaagtg 211  Q
     | ||||| ||| | ||  || |||| |||||||||||||||||||| ||| |||||| | ||| ||||| |||||||||||||||||||  ||| ||||    
T  11343683 ct-tgcattttttttccatttctttcaatctaaataagtgatttttaacatctatcaaatattttcttttgtgttttttcgtgatttcgttgtctgagtg 11343781  T
Q  212 cgttgttgtgatgtt 226  Q
    ||  |||||| ||||    
T  11343782 cggcgttgtgttgtt 11343796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 213
Target Start/End: Complemental strand, 26610988 - 26610852
Alignment:
Q  76 agggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    ||||||||||||||| |||||| ||| || |||||||| | ||||||||| ||||| || |||  || |||||||||| |||  ||||||||||||||||    
T  26610988 agggtggttttaggttattttt-gacctaaaatcacccttatgcatctttttcccctttctttgaatttaaataagtggtttccacatatatcaagtttt 26610890  T
Q  176 ac-ttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
     | |||| |||||||| ||||||||||| ||| ||||||    
T  26610889 ccattttgtgtttttt-gtgatttcgtcgtctgagtgcg 26610852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 226
Target Start/End: Original strand, 40993032 - 40993179
Alignment:
Q  82 gttttaggtcattttttgacttagaatcacccatctgcatctttctcccca---ttatttcgatctaaataagtgatttttacatatatcaag-ttttac 177  Q
    |||||||||||||||||||| || |||||| | ||| ||||||| |  |||   || |||| ||||||||||||| |||| |||| ||||||| |||| |    
T  40993032 gttttaggtcattttttgacctaaaatcactcctctacatctttttttccacttttctttcaatctaaataagtggttttcacatctatcaagtttttcc 40993131  T
Q  178 ttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    |||| |||||||| ||||||||||| ||||||||||  |||||| ||||    
T  40993132 ttttgtgtttttt-gtgatttcgtcgtctaagtgcggcgttgtgttgtt 40993179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 169
Target Start/End: Original strand, 25255083 - 25255176
Alignment:
Q  76 agggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatca 169  Q
    |||||||||||||||||||||||||| || |||||||| | ||||||||| ||||| || |||| || |||||||||  |||| ||| ||||||    
T  25255083 agggtggttttaggtcattttttgacctataatcacccctttgcatctttttcccctttctttcaatttaaataagttgttttcacacatatca 25255176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 159
Target Start/End: Complemental strand, 8013767 - 8013626
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||||||||||||||||||  | || || |  ||   ||||  |||| |||||||||||| |||||||||||| ||||||||||| ||| |    
T  8013767 agtgagagaaacttcaacttctctctaaactttctttcttctttgttcatcgaggaggggtggttttagatcattttttgacctagaatcacccctctac 8013668  T
Q  120 atctttct--ccccattatttcgatctaaataagtgattttt 159  Q
    |||||| |  |||  || ||||  ||||||||||||||||||    
T  8013667 atctttttttcccttttctttcagtctaaataagtgattttt 8013626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 19296719 - 19296772
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatcttt 125  Q
    |||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||    
T  19296719 aggaggggtggttttaggtcattttttgacctagaatcacccctctacatcttt 19296772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 175
Target Start/End: Original strand, 24770101 - 24770200
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatc-tttctccccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    ||||| |||||||||||||| ||||||||||||| |||||| |||| ||| |  |  || |||| ||||||||||||| |||| ||||||||||| ||||    
T  24770101 gggtgattttaggtcattttatgacttagaatcatccatctacatcttttttttcttttctttcaatctaaataagtggttttcacatatatcaaatttt 24770200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 226
Target Start/End: Original strand, 39228862 - 39229012
Alignment:
Q  78 ggtggttttaggtcattttttgacttagaatcacc-catctgcatctttctc-cccattatttcgatctaaataagtgatttttacatatatcaag-ttt 174  Q
    |||| ||||||||||||||||||| |||||||||| | ||||||||||| || |  | | |||  ||||||||||||| |||| ||| ||||||||  ||    
T  39228862 ggtgattttaggtcattttttgacctagaatcacctcctctgcatctttttctcaaaattttttaatctaaataagtggttttcacacatatcaagactt 39228961  T
Q  175 tacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    |  |||| |||||||| ||||||||||  ||| |||||||||||||| ||||    
T  39228962 tcattttgtgtttttt-gtgatttcgttgtctgagtgcgttgttgtgttgtt 39229012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 45350044 - 45350007
Alignment:
Q  80 tggttttaggtcattttttgacttagaatcacccatct 117  Q
    |||||||||||||||||||||| |||||||||||||||    
T  45350044 tggttttaggtcattttttgacctagaatcacccatct 45350007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 23425576 - 23425490
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacata 164  Q
    |||||||||| ||||| || ||||| |  |||||||| ||| ||||||| || | || ||||| ||||||||||||||||||||||||    
T  23425576 gggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctat-atttcaatctaaataagtgatttttacata 23425490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 123
Target Start/End: Original strand, 38798636 - 38798679
Alignment:
Q  80 tggttttaggtcattttttgacttagaatcacccatctgcatct 123  Q
    ||||||||||||||| |||||| ||||||||||||||| |||||    
T  38798636 tggttttaggtcattctttgacatagaatcacccatctacatct 38798679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 155
Target Start/End: Complemental strand, 24069680 - 24069607
Alignment:
Q  83 ttttaggtcattttttgacttagaatcacccatctgcatctttct-ccccattatttcgatctaaataagtgat 155  Q
    ||||| ||||||||||||  ||||| ||||| |||| |||||| | |||| ||||||| |||||||||||||||    
T  24069680 ttttatgtcattttttgatctagaaccacccttctgtatctttttccccctttatttcaatctaaataagtgat 24069607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 48930677 - 48930725
Alignment:
Q  127 tccccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    ||||| || |||| |||||||||||||||||| ||||| ||||||||||    
T  48930677 tcccctttctttcaatctaaataagtgattttcacatacatcaagtttt 48930725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 8e-42; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 44543063 - 44543255
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||||| || || ||||||||||||  |||||||||| |||||||| ||| |||||| || ||||| || |||||    
T  44543063 agtgagagaaactccaacttctctctaagttttccttctctttcactcatcgaggaagggtgcttttaggttattctttgacctaaaatcagcc-tctgc 44543161  T
Q  120 atctttctccccattatttcgatctaaataagtgatttttacatatatcaagt-tttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    |||||| | ||| || ||||||||||||||||||||||| ||| ||||||||| ||| ||||| |||||||| ||||||||||| ||||||||||    
T  44543162 atcttttttccctttctttcgatctaaataagtgattttcacaaatatcaagtgttttcttttgtgtttttt-gtgatttcgtcgtctaagtgcg 44543255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 213
Target Start/End: Original strand, 49626701 - 49626896
Alignment:
Q  21 gtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgca 120  Q
    |||||||||||| ||||||||||||||||  || || ||||||||||||  |||| |||||||||||||||||| |||||| || |||||||| ||||||    
T  49626701 gtgagagaaactccaacttctctctaagtgttccttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatcacccctctgca 49626800  T
Q  121 tc-tttctccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatg-ttttttcgtgatttcgtcatctaagtgcg 213  Q
    || ||| ||||| || |||| |||||||||||||||||| ||| ||||||||  ||| ||||| || |||||| ||||||||||| |||| |||||    
T  49626801 tcttttttcccctttctttctatctaaataagtgattttcacaaatatcaagcgttttcttttgtgttttttttgtgatttcgtcgtctatgtgcg 49626896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 1742071 - 1742279
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||  ||||||| |||||  |  | || ||||||  |||| |||||| |||||||||||||||||||||||| ||||||||||| ||| |    
T  1742071 agtgagagaaactcaaacttctttctaaacttcctttctctttcgttcatcaaggaatggtggttttaggtcattttttgacctagaatcacccctctcc 1742170  T
Q  120 atc-tttctccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgt 217  Q
    ||| |||| |||  || |||| ||||||||||||| |||| |||||||||||| |||| ||||| | |||||| ||||||||||| ||||||||||  ||    
T  1742171 atcttttcccccttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtatttttttgtgatttcgtcgtctaagtgcggcgt 1742270  T
Q  218 tgtgatgtt 226  Q
    |||| ||||    
T  1742271 tgtgttgtt 1742279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 18939112 - 18939303
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||||| |||||||||||||| || || || |||| | ||  ||||  |||||||||||||||||||||||  ||||||||||  |||||    
T  18939112 agtgagagaaacttcaccttctctctaagttttctttctccttcattaatcgaggagaggtggttttaggtcattttttgatctagaatcacctctctgc 18939211  T
Q  120 atctttctccccattatttcgatctaaataagtgatttttacatatatcaagttttac-ttttatgttttttcgtgatttcgtcatctaagtg 211  Q
    |||||| ||||| || |||| || |||||||||  |||| ||| |||||||||||| | |||| |||||||| ||||||||||| ||| ||||    
T  18939212 atctttttcccctttctttcaatttaaataagtagttttcacacatatcaagtttttcattttgtgtttttt-gtgatttcgtcgtctgagtg 18939303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 77 - 211
Target Start/End: Original strand, 9341572 - 9341707
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagt-ttt 175  Q
    ||||||||||||||||||||||||||||||||||||  | ||||||||| ||| | || |||| || ||||||||  ||||| ||||||||||||| |||    
T  9341572 gggtggttttaggtcattttttgacttagaatcacctgtatgcatctttttcctctttctttcaatataaataagaaattttcacatatatcaagtgttt 9341671  T
Q  176 acttttatgttttttcgtgatttcgtcatctaagtg 211  Q
     ||||| ||||||| |||||||||||| ||| ||||    
T  9341672 tcttttgtgtttttacgtgatttcgtcgtctgagtg 9341707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 226
Target Start/End: Original strand, 16161660 - 16161829
Alignment:
Q  58 tctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctcc-ccattatttcgatctaaataagtgatt 156  Q
    |||||||| |||  |||| ||||  |||||||||| |||||||| ||||||||||  ||| ||| ||| | | || ||||||| ||||||||||||||||    
T  16161660 tctttcacacatcgaggaggggtaattttaggtcaatttttgacctagaatcacctctcttcatattttttctcctttatttcaatctaaataagtgatt 16161759  T
Q  157 tttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    |  ||||| |||||||||| ||||| |||||||||||||||||||| ||| ||||||  |||||| ||||    
T  16161760 tccacatacatcaagtttttcttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgtt 16161829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 72 - 202
Target Start/End: Original strand, 32394841 - 32394972
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctcccc-attatttcgatctaaataagtgatttttacatatatcaa 170  Q
    |||| |||||||||||||||||||||||||||||||||| || ||||||||||| |||||  || |||| |||||||| |||| |||| |||| ||||||    
T  32394841 aggaggggtggttttaggtcattttttgacttagaatcatccctctgcatctttttccccttttctttcaatctaaatgagtggttttcacatctatcaa 32394940  T
Q  171 g-ttttacttttatgttttttcgtgatttcgtc 202  Q
    | |||| ||||| |||||||| |||||||||||    
T  32394941 gtttttccttttgtgtttttt-gtgatttcgtc 32394972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 228
Target Start/End: Original strand, 31983970 - 31984178
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||  | || || |  ||   |||| |||||  |||||||||||||||||||||||| ||||| ||||  ||| |    
T  31983970 agtgagagaaactccaacttctctctaaactttctttcttctttgttcatcaaggagaggtggttttaggtcattttttgacctagaagcacctctctac 31984069  T
Q  120 atctttct--ccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgt 217  Q
    |||||| |  |||  || |||||||||||||||||| |||| |||||||||||||||| |  || |||||||| ||||||||||| ||||||||||  ||    
T  31984070 atctttttttcccttttctttcgatctaaataagtggttttcacatatatcaagtttttc-cttgtgtttttt-gtgatttcgtcgtctaagtgcggcgt 31984167  T
Q  218 tgtgatgtttg 228  Q
    |||| ||||||    
T  31984168 tgtgttgtttg 31984178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 190
Target Start/End: Original strand, 45789415 - 45789525
Alignment:
Q  80 tggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagttttactt 179  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||| ||||| || |||| || |||||||||| |||| |||| ||| |||||||  ||    
T  45789415 tggttttaggtcattttttgacctagaatcacccctctgcatctttttcccctttctttcaatttaaataagtggttttcacatgtattaagtttttttt 45789514  T
Q  180 ttatgtttttt 190  Q
    || ||||||||    
T  45789515 ttttgtttttt 45789525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 12634957 - 12635110
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||  |||||||||||| ||| |  || |||||||||| |  |||| | |||||||||||||||||| |||| || |||||||| | |||    
T  12634957 agtgagagaaactcaaacttctctctatgttttttttctctttcactcgtcgaggatgtgtggttttaggtcattttctgacctataatcacccctttgc 12635056  T
Q  120 atc-tttctccccattatttcgatctaaataagtgatttttacatatatcaagt 172  Q
    ||| ||| |||| ||| | || |||||||||||||||||| |||||||||||||    
T  12635057 atcttttttcccaattttgtcaatctaaataagtgattttcacatatatcaagt 12635110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 34528509 - 34528645
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||| ||| ||| |||||||| ||| |||| || || ||||||||||||  | || | ||||||||| ||||||||||||| ||||||||||| |||||    
T  34528509 agtgaaagagactccaacttctgtcttagttttctttttctttcactcatcgaagatgagtggttttatgtcattttttgacctagaatcacccctctgc 34528608  T
Q  120 atctttctccccattatttcgatctaaataagtgattt 157  Q
    |||||| | ||| || ||||||||||||||||||||||    
T  34528609 atcttt-ttccctttctttcgatctaaataagtgattt 34528645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 36775934 - 36775811
Alignment:
Q  103 tagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtc 202  Q
    ||||||||||| ||||||||||| | ||| || |||| |||||||||| ||||||| ||||| |||||||||| ||||  ||||||||||||||||| ||    
T  36775934 tagaatcacccctctgcatcttttttccctttctttcaatctaaataaatgattttcacatacatcaagtttttctttcgtgttttttcgtgatttcttc 36775835  T
Q  203 atctaagtgcgttgttgtgatgtt 226  Q
    || | ||||||  |||||| ||||    
T  36775834 attttagtgcgacgttgtgttgtt 36775811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 210
Target Start/End: Complemental strand, 11462747 - 11462558
Alignment:
Q  23 gagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc 122  Q
    |||||||||||||| ||||||||||  | || || || |||  ||||| | || ||||| |||||||| |||||||||| ||||||||||| ||||||||    
T  11462747 gagagaaacttcaatttctctctaaactttctttctccttcgttcattgacgaggggtgattttaggttattttttgacctagaatcacccctctgcatc 11462648  T
Q  123 tttctccccattatt---tcgatctaaataagtgatttttacatatatcaagtttta-cttttatgttttttcgtgatttcgtcatctaagt 210  Q
    ||| | ||| || ||   || |||||||||||||  ||| |||| |||||||||||  ||||| |||||||  |||||||||||||||||||    
T  11462647 ttttttcccctttttctttcaatctaaataagtgggtttcacatctatcaagttttttcttttgtgttttt--gtgatttcgtcatctaagt 11462558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 210
Target Start/End: Complemental strand, 23291881 - 23291752
Alignment:
Q  83 ttttaggtcattttttgacttagaatcacccatctgcatctttctccccatta-tttcgatctaaataagtgatttttacatatatcaag-ttttacttt 180  Q
    ||||||||||||||||||| ||||||||||| ||  ||||||| | | | ||  |||| ||||||||||||| |||| |||||||||||| |||| ||||    
T  23291881 ttttaggtcattttttgacctagaatcacccctcgacatcttttttctcttttctttcaatctaaataagtggttttcacatatatcaagttttttcttt 23291782  T
Q  181 tatgttttttcgtgatttcgtcatctaagt 210  Q
    | |||||||| ||||||||||| |||||||    
T  23291781 tgtgtttttttgtgatttcgtcgtctaagt 23291752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 34878573 - 34878417
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| |||||||||| |||  | || || ||||||  ||||  |||| ||||||||||||||||||||||||| ||||||||| ||||| |    
T  34878573 agtgagagaaactccaacttctctttaaactttctttctctttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcactcatctac 34878474  T
Q  120 atctttctccccatta-tttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    |||||| | ||  ||  |||| || |||||||||| |||| ||| ||||||||||||    
T  34878473 atcttttttccattttctttcaatttaaataagtggttttcacacatatcaagtttt 34878417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 213
Target Start/End: Original strand, 45415401 - 45415543
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttct--ccccattatttcgatctaaataagtgatttttacatatatca 169  Q
    |||| ||||||||||||||||||||||||  ||||||||||| ||| ||||||| |  |||  || |||| || |||||||||| |||| |||| |||||    
T  45415401 aggaggggtggttttaggtcattttttgatctagaatcacccctctacatcttttttccccttttctttcaatttaaataagtggttttcacatctatca 45415500  T
Q  170 agttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    ||||||  | || |||||||| ||||||||||| ||||||||||    
T  45415501 agtttt-ttcttgtgtttttttgtgatttcgtcgtctaagtgcg 45415543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 10776759 - 10776657
Alignment:
Q  23 gagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc 122  Q
    |||||||||| ||| ||||||||||  | || || || |||| ||||  ||||||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  10776759 gagagaaactccaatttctctctaaactttctttctccttcattcatcgaggaagggtggttttagatcattttttgacctagaatcacccatctacatc 10776660  T
Q  123 ttt 125  Q
    |||    
T  10776659 ttt 10776657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 32679401 - 32679192
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||| | |||||| |||||||||| || || |||||||||| |  |||| ||||||||||| ||||||||||||| |||||||| || |||||    
T  32679401 agtgagagaaattccaacttttctctaagttttctttctctttcactcgtcgaggaggggtggttttatgtcattttttgacatagaatcatccctctgc 32679302  T
Q  120 atc-tttctccccattatttcgatctaaataagtgatttttacatatatcaa--gttttacttttatgttttttcgtgatttcgtcatctaagtgcgttg 216  Q
    | |  || |  |  || |||| || ||||||||||||||  |||||||||||  |||||| |||  | ||||||||||||||| || ||| ||||||  |    
T  32679301 accaattttatcttttctttcaatttaaataagtgatttccacatatatcaattgttttattttggttttttttcgtgatttcatcgtctgagtgcggcg 32679202  T
Q  217 ttgtgatgtt 226  Q
    ||||| ||||    
T  32679201 ttgtgttgtt 32679192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 230
Target Start/End: Original strand, 940214 - 940365
Alignment:
Q  79 gtggttttaggtcattttttgacttagaatcacccatctgcatctt-tctccccatta-tttcgatctaaataagtgatttttacatatatcaagtttta 176  Q
    ||||||||| |||||||||| || |||||||||||||||||||||| | ||||| ||  |||  || |||||||||| |||| ||||||||||||||||     
T  940214 gtggttttaagtcatttttt-acctagaatcacccatctgcatcttgtttccccttttcttttaatttaaataagtggttttcacatatatcaagttttt 940312  T
Q  177 cttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtttgtc 230  Q
       || |||||||| |||||| |||| |||||||||| ||||||| ||||||||    
T  940313 tccttgtgtttttt-gtgattccgtcgtctaagtgcggtgttgtgttgtttgtc 940365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 15435133 - 15434982
Alignment:
Q  61 ttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc-tttctccccattatttcgatctaaataagtgattttt 159  Q
    |||| |||| ||||| ||| ||||||||||||||||||||  |||||||| || ||| |||| ||| ||||  || |||| ||||||||||||| ||||     
T  15435133 ttcattcatcaaggaggggcggttttaggtcattttttgatctagaatcaaccctctacatcttttttcccttttctttcaatctaaataagtgtttttc 15435034  T
Q  160 acatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    ||||| |||||||||| | ||| || ||||| ||||||||||| ||||||||||    
T  15435033 acataaatcaagtttttccttt-tg-tttttagtgatttcgtcgtctaagtgcg 15434982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 48749997 - 48750140
Alignment:
Q  37 cttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttct-ccccatta 135  Q
    |||||||||||||| || |  ||||||||||||  |||| ||||| | ||||||||  ||||||| ||||||||| | | ||||||||| | |||| ||     
T  48749997 cttctctctaagttttcttcctctttcactcatcgaggaggggtgatattaggtcaaattttgacctagaatcactcct-tgcatcttttttcccctttc 48750095  T
Q  136 tttcgatctaaataagtgatttttacatatatcaagttttacttt 180  Q
    |||| |||||||||||||||||| ||||| |||||||||| ||||    
T  48750096 tttcaatctaaataagtgattttcacatacatcaagtttttcttt 48750140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 190
Target Start/End: Original strand, 19060717 - 19060864
Alignment:
Q  45 taagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc-tttctccccattatttcgatc 143  Q
    |||||| || || |||||||||||| ||| | |||||||||||||| ||| ||| |  || ||||||||||||||||| ||| | ||| || |||||||     
T  19060717 taagttttccttctctttcactcatcaagcacgggtggttttaggttattcttttatctaaaatcacccatctgcatctttttttccctttctttcgatt 19060816  T
Q  144 taaataagtgatttttacatatatcaag-ttttacttttatgtttttt 190  Q
    |||||||| |||||| ||| ||||||||  ||| ||||||||||||||    
T  19060817 taaataagcgattttcacaaatatcaagcgttttcttttatgtttttt 19060864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 29738935 - 29738781
Alignment:
Q  23 gagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc 122  Q
    |||||||||| |||| |||||||||  | || || || |||  ||||  |||| |||||||||||||||| ||||| || ||||||||||| ||| ||||    
T  29738935 gagagaaactccaacatctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcaattttttacctagaatcacccctctacatc 29738836  T
Q  123 tttctcccc--attatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    ||| |||||   || |||| ||||||||||||| |||| |||| |||||||||||    
T  29738835 tttttcccctttttctttcaatctaaataagtggttttcacatctatcaagtttt 29738781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 221
Target Start/End: Original strand, 31317601 - 31317743
Alignment:
Q  80 tggttttaggtcattttttgacttagaatcacc-catctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagttttac- 177  Q
    ||||||||||| |||| ||||| |||||||||| | ||||||||||| ||| |||| |||| || |||||||||| |||| ||| |||||||||||| |     
T  31317601 tggttttaggtaatttgttgacatagaatcacctcctctgcatctttttcctcattctttcaatttaaataagtggttttcacacatatcaagtttttca 31317700  T
Q  178 ttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtg 221  Q
    |||| |||||||| || |||||||| | | |||||| |||||||    
T  31317701 ttttgtgtttttt-gtaatttcgtcgtgtgagtgcggtgttgtg 31317743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 168
Target Start/End: Complemental strand, 569085 - 568936
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaaggg-tggttttaggtca-ttttttgacttagaatcacccatct 117  Q
    |||||||||||||||||||||||| ||| || || || ||||||||||||  |||| ||| |||||||| ||   |||||| || ||||||| ||| |||    
T  569085 agtgagagaaacttcaacttctctataaatt-tctttctctttcactcatctaggagggggtggttttaagtatgtttttttacctagaatcccccctct 568987  T
Q  118 gcatctttctccccattatttcgatctaaataagtgatttttacatatatc 168  Q
     ||||||| ||||| || |||| |||||||||||||||||| || ||||||    
T  568986 acatctttttcccctttctttcaatctaaataagtgattttcacgtatatc 568936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 7337965 - 7337757
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||| ||||||||||||||||||||||  | || || || |||  ||||  |||| || ||||| || ||||||||||||  ||||||||||| ||| |    
T  7337965 agtgaaagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggagggatggttctatgtcattttttgatctagaatcacccctctac 7337866  T
Q  120 atctttctccccattat--ttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttg 216  Q
    |||||| | ||  || |  ||| ||||||||||||| |||| |||| ||||||| |||| ||||| |||||||| |||||||| || ||||||||||  |    
T  7337865 atcttttttcctcttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttt-gtgatttcatcgtctaagtgcggcg 7337767  T
Q  217 ttgtgatgtt 226  Q
    ||||| ||||    
T  7337766 ttgtgttgtt 7337757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 213
Target Start/End: Original strand, 5983629 - 5983821
Alignment:
Q  23 gagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc 122  Q
    ||||||||||| |||||||||||||  | |  || || |||  ||||  |||| || ||||||||| |||||||||||| ||||||||| | ||| ||||    
T  5983629 gagagaaactttaacttctctctaaactttatttctccttcgttcatcgaggagggatggttttagatcattttttgacctagaatcactcgtctacatc 5983728  T
Q  123 tttctcccc---attatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    ||| | |||    || ||||||||||||||| || |||| |||| ||||||| |||| ||||| |||||||  ||||||||||| ||||||||||    
T  5983729 ttttttcccctttttctttcgatctaaataaatggttttcacatctatcaagtttttgcttttgtgttttt--gtgatttcgtcgtctaagtgcg 5983821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 47132807 - 47132883
Alignment:
Q  136 tttcgatctaaataagtgatttttacatatatcaagt-tttacttttatgttttttcgtgatttcgtcatctaagtg 211  Q
    |||| ||||||||||||||||| |||||||||||||| ||| ||||| || ||||||||||||||||| ||| ||||    
T  47132807 tttcaatctaaataagtgatttctacatatatcaagtgttttcttttgtgctttttcgtgatttcgtcgtctgagtg 47132883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 34413393 - 34413247
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||    |||||||||||||| |  || ||||||||| ||  || | ||||| |||||||||| ||||| |  ||||||||||| |||||    
T  34413393 agtgagagaaactctgccttctctctaagttttttttctctttcacttatcgagtaggggtgattttaggtcaattttttatctagaatcacccctctgc 34413294  T
Q  120 atc--tttctccccattatttcgatctaaataagtgatttttacata 164  Q
    |||  ||| ||||| || |||| |||||||||||||||||| |||||    
T  34413293 atctttttttcccctttctttcaatctaaataagtgattttcacata 34413247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 31692736 - 31692618
Alignment:
Q  49 ttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaat 148  Q
    ||||| || ||||||||||||  |||| | ||| ||||||||||||||||||| | ||||||||| ||||||| ||| |  || || ||||||||||| |    
T  31692736 ttctctttctctttcactcatcgaggatgtgtgattttaggtcattttttgaccttgaatcacccctctgcatttttttttcctttctttcgatctaagt 31692637  T
Q  149 aagtgatttttacatatat 167  Q
    || ||||||| ||| ||||    
T  31692636 aattgattttcacacatat 31692618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 37720305 - 37720243
Alignment:
Q  136 tttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgattt 198  Q
    |||| |||||||||||||||||  ||||| |||||||||| ||||| ||||||||||||||||    
T  37720305 tttcaatctaaataagtgatttccacatacatcaagtttttcttttgtgttttttcgtgattt 37720243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 3228068 - 3228165
Alignment:
Q  28 aaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatcttt 125  Q
    ||||| ||||||||| |||| || |  || || |||| |||| ||||| |||||||||||||||||||||| || || |||||||||||| |||||||    
T  3228068 aaactccaacttctccctaaattttatttctccttcattcatcaaggaggggtggttttaggtcattttttaacctacaatcacccatctacatcttt 3228165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 191
Target Start/End: Original strand, 15492109 - 15492254
Alignment:
Q  45 taagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatct 144  Q
    |||||| || || ||||| ||||||| ||||  |||||||||||||| ||||||||| || ||||| |  | ||||||||| |||   || |||| ||||    
T  15492109 taagttttctttctcttttactcattgaggagaggtggttttaggtc-ttttttgacctaaaatcatcattttgcatctttttccat-ttctttcaatct 15492206  T
Q  145 aaataagtgatttttacatatatcaag-ttttacttttatgttttttc 191  Q
    |||||| ||||||| |||||||||||| |||| ||||| |||||||||    
T  15492207 aaataaatgattttcacatatatcaagttttttcttttgtgttttttc 15492254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 8212089 - 8212004
Alignment:
Q  141 atctaaataagtgatttttacatatatcaagtttt-acttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    ||||||||||||| |||| ||||||||||||||||  ||||| |||||||| ||||||||||| ||||| ||||  |||||| ||||    
T  8212089 atctaaataagtggttttcacatatatcaagttttcccttttgtgtttttt-gtgatttcgtcgtctaaatgcggcgttgtgttgtt 8212004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 212
Target Start/End: Complemental strand, 21947868 - 21947726
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttct---ccccattatttcgatctaaataagtgatttttacatatatc 168  Q
    |||| |||||||||||||| ||||||  || |||||||| |||||| ||| ||| |   |||  || |||| ||||||||||||| |||| |||| ||||    
T  21947868 aggatgggtggttttaggttattttta-acctagaatcatccatctacatatttttttccccttttctttcaatctaaataagtggttttcacatctatc 21947770  T
Q  169 aag-ttttacttttatgttttttcgtgatttcgtcatctaagtgc 212  Q
    ||| |||| ||||| |||||||| ||||||||||| |||||||||    
T  21947769 aagttttttcttttgtgtttttt-gtgatttcgtcgtctaagtgc 21947726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 24012956 - 24012866
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatca 110  Q
    ||||||||||||||||| |||| ||||||||||| || ||||||||||||  | ||  | || ||||| |||| |||||||| ||||||||    
T  24012956 agtgagagaaacttcaaattctttctaagttctctttctctttcactcatcgacgatagatgattttatgtcaatttttgacctagaatca 24012866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 226
Target Start/End: Complemental strand, 35462283 - 35462131
Alignment:
Q  77 gggtggttttaggtcatt-ttttgacttagaatcacccatctgcatctttct--ccccattatttcgatctaaataagtgatttttacatatatcaag-t 172  Q
    |||||||||||||||||| |||| || |||||||| || ||| ||||||| |  |||  || |||| || |||||||||| |||| |||| ||||||| |    
T  35462283 gggtggttttaggtcattttttttacatagaatcatccctctacatcttttttccccttttctttcaatttaaataagtggttttcacatctatcaagtt 35462184  T
Q  173 tttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    ||| ||||| |||||||| ||||||||||| | ||||||||  |||||| ||||    
T  35462183 tttccttttgtgtttttt-gtgatttcgtcgtgtaagtgcggcgttgtgttgtt 35462131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 7837016 - 7836975
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcaccc 113  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  7837016 aggaagggtggttttaggtcattttttgatctagaatcaccc 7836975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 14872488 - 14872587
Alignment:
Q  79 gtggttttaggtcattttttgacttagaatcacccatctgcatctttct---ccccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    |||||||| |||||||||||||||||||||||| | ||| ||||||| |   ||   || |||| || |||||||||| |||||||| ||||||||||||    
T  14872488 gtggttttcggtcattttttgacttagaatcactcctctacatctttttttccctttttctttcaatgtaaataagtggtttttacaaatatcaagtttt 14872587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 47132705 - 47132781
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttt 97  Q
    ||||||||||||| |||||||| | |||||| || || |||||||||| || |||| ||||| |||||||||||||||    
T  47132705 agtgagagaaactccaacttcttt-taagttttcgttttctttcactcgttgaggaggggtgattttaggtcattttt 47132781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 214
Target Start/End: Complemental strand, 13075863 - 13075742
Alignment:
Q  94 tttttgacttagaatcacccatctgcatctttctccccatta-tttcgatctaaataagtgatttttacatatatc-aagt-tttacttttatgtttttt 190  Q
    |||||||| |||||||  |||||||||||||| | | ||||  |||| ||||||||||||||||   ||||||||| |||| ||| ||||| ||||||||    
T  13075863 tttttgacatagaatcttccatctgcatcttttttctcatttctttcaatctaaataagtgattc--acatatatctaagtattttcttttgtgtttttt 13075766  T
Q  191 cgtgatttcgtcatctaagtgcgt 214  Q
    ||||||||| || ||| |||||||    
T  13075765 cgtgatttcatcgtctgagtgcgt 13075742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 34479346 - 34479438
Alignment:
Q  83 ttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    |||||||||||||||| | |||||||||  | ||||||||||| | ||| || |||  || |||||||||| |||| ||| ||||||||||||    
T  34479346 ttttaggtcattttttaatttagaatcattcgtctgcatcttttttccctttcttttaatttaaataagtggttttcacacatatcaagtttt 34479438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 20266178 - 20266264
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacata 164  Q
    |||||||||| ||||| || ||||  || |||||||||||| ||||||| || |  ||||||| |||||||||||||||||| |||||    
T  20266178 gggtggttttgggtcaattcttgatctaaaatcacccatcttcatctttttctct-ttatttcaatctaaataagtgattttcacata 20266264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 27872615 - 27872701
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacata 164  Q
    |||||||||| ||||| |||||||| |  |||||||||||| ||||||| | | |  |||||| |||||||||||||||||| |||||    
T  27872615 gggtggttttgggtcaatttttgacatgaaatcacccatcttcatcttt-ttcgctctatttcaatctaaataagtgattttcacata 27872701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 1602023 - 1602089
Alignment:
Q  136 tttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtc 202  Q
    |||||||||||||||||| ||| || |||||||||||||  ||||  ||| ||||| ||||||||||    
T  1602023 tttcgatctaaataagtggtttctatatatatcaagtttatctttcgtgtcttttcatgatttcgtc 1602089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 112
Target Start/End: Original strand, 15836041 - 15836075
Alignment:
Q  78 ggtggttttaggtcattttttgacttagaatcacc 112  Q
    |||||||||||||||||||||||| ||||||||||    
T  15836041 ggtggttttaggtcattttttgacctagaatcacc 15836075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 26535260 - 26535341
Alignment:
Q  95 ttttgacttagaatcacccatctgcatctttctccccatta-tttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    ||||||| ||||||||| ||||| ||||||| || || ||  |||| ||||||||||||| |||| |||||||| |||||||    
T  26535260 ttttgacctagaatcacacatctacatctttttctccttttctttcaatctaaataagtggttttcacatatattaagtttt 26535341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 50625369 - 50625277
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcaccc 113  Q
    |||||||||||  |||  |||||||| ||||||| || |||||||||| || || || | |||||||| ||||| |||| ||||||||||||||    
T  50625369 agtgagagaaatctcacattctctctcagttctctttctctttcactcgttgagaaatgatggttttatgtcatctttt-acttagaatcaccc 50625277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 31918902 - 31918973
Alignment:
Q  141 atctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    ||||||||||||| |||| ||||||||||||||||  | || ||| |||| ||||||||||| ||||| ||||    
T  31918902 atctaaataagtggttttcacatatatcaagtttt-ttcttttgtatttttgtgatttcgtcgtctaattgcg 31918973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 58381 - 58173
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||||| || || |||||||||| |  |||| ||||||||||||||||||||||||| || |||||||| |||||    
T  58381 agtgagagaaactccaacttctctctaagttttcgttttctttcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatcacccctctgc 58282  T
Q  120 at-ctttctccccattatttcgatctaaataagtgatttttacatatatcaagt-tttacttttatgttttttcgtgatttcgtcatctaagtgcgttgt 217  Q
    || |||| | ||  || |||| |||||||||||||||||  ||||||||||||| ||| ||||| || |||||||||||||| || ||| ||||||  ||    
T  58281 atccttttttccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgatttcatcgtctgagtgcggcgt 58182  T
Q  218 tgtgatgtt 226  Q
    |||| ||||    
T  58181 tgtgttgtt 58173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 12648226 - 12648018
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| |||||||||| |||||| || || ||||| |||| || |||| ||||||||||||||||||||||||| ||||||||||| ||  |    
T  12648226 agtgagagaaactccaacttctctttaagttttctttctcttttactcgttgaggaggggtggttttaggtcattttttgacctagaatcacccctccac 12648127  T
Q  120 atc-tttctccccattatttcgatctaaataagtgatttttacatatatcaagt-tttacttttatgttttttcgtgatttcgtcatctaagtgcgttgt 217  Q
    ||| ||| || |  || |||| |||||||||||||||||  ||||||||||||| ||| ||||| ||| ||||||||||||| || |||||||||| |||    
T  12648126 atcttttttctcttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgtattttcgtgatttcatcgtctaagtgcggtgt 12648027  T
Q  218 tgtgatgtt 226  Q
    |||| ||||    
T  12648026 tgtgttgtt 12648018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 32448923 - 32448729
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||  ||||||||| ||| || |  || ||||||||||||  |||| |||||||||||||||||| |||||| || |||||||| |||||    
T  32448923 agtgagagaaactctaacttctctttaaatttttcttttctttcactcatcgaggaggggtggttttaggtcattatttgacctaaaatcacccctctgc 32448824  T
Q  120 atctttctccccattatttcgatctaaataagtgatttttacatatatcaa--gttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    |||||| ||||| || ||||||||||||||||||||||| ||  |||||||  |||||| |||| |||||||| ||||||||||| ||||||||||    
T  32448823 atctttttcccctttctttcgatctaaataagtgattttcaccaatatcaagcgtttta-ttttgtgtttttttgtgatttcgtcgtctaagtgcg 32448729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 202
Target Start/End: Original strand, 24461238 - 24461418
Alignment:
Q  22 tgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcat 121  Q
    |||| |||||| ||||||||||||||||| | ||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| | |||||||    
T  24461238 tgagtgaaactccaacttctctctaagtttttattctctttcactcattaaggaggggtggttttaggtcattttttgacctagaatcactcctctgcat 24461337  T
Q  122 c---tttctccccattatttcgatctaaataagtgatttttacatatatcaagt-tttacttttatgttttttcgtgatttcgtc 202  Q
    |   ||||||    || |||| |||||||||||||||||  ||||||||||||| |||  |||| ||||||| ||||||| ||||    
T  24461338 ccgttttctc----ttttttcaatctaaataagtgatttccacatatatcaagtgtttttttttgtgtttttacgtgattccgtc 24461418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 72 - 230
Target Start/End: Original strand, 3308788 - 3308947
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttct-ccccattatttcgatctaaataagtgatttttacatatatcaa 170  Q
    |||| ||||| |||||||||| |||||||| ||||||||||| | ||||||||| | |||| ||||||| |||||||||||||||||| ||||| |||||    
T  3308788 aggaggggtgattttaggtcaatttttgacctagaatcacccctttgcatcttttttcccctttatttcaatctaaataagtgattttcacatacatcaa 3308887  T
Q  171 gttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtttgtc 230  Q
    ||||| ||||  |||||||||||||||||||| ||| ||||||  |||||| | ||||||    
T  3308888 gtttttctttcgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttatttgtc 3308947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 77 - 211
Target Start/End: Complemental strand, 43397364 - 43397229
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaag-tttt 175  Q
    ||||||||||||||||||||||||| ||||||||||  ||| ||||||| ||||  || |||| ||||||||||||| |||| |||||||||||| ||||    
T  43397364 gggtggttttaggtcattttttgacctagaatcacctctctacatctttttcccttttctttcaatctaaataagtggttttcacatatatcaagttttt 43397265  T
Q  176 acttttatgttttttcgtgatttcgtcatctaagtg 211  Q
     ||||| |||||||||||||||||||| ||||||||    
T  43397264 tcttttgtgttttttcgtgatttcgtcgtctaagtg 43397229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 4098900 - 4099108
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||| |||||||| ||||||||||||||  | || || ||||||  ||||  ||||||||||| |||||||||||||||||| ||||||||||||||| |    
T  4098900 agtgggagaaactccaacttctctctaaactttctttctctttccttcatcgaggaagggtggctttaggtcattttttgacctagaatcacccatctac 4098999  T
Q  120 atctttct--ccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttg 216  Q
    |||||| |  |||  || |||| ||||||||||||| |||| |||| ||||||| |||| ||||| |||||||| || |||||||| ||||||||||  |    
T  4099000 atcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttt-gtaatttcgtcgtctaagtgcggcg 4099098  T
Q  217 ttgtgatgtt 226  Q
    ||||| ||||    
T  4099099 ttgtgttgtt 4099108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 175
Target Start/End: Original strand, 6436407 - 6436561
Alignment:
Q  22 tgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcat 121  Q
    |||||||||||| | ||||||||||||||  | || | ||||| ||||||| || ||||| ||||||||||||||||||| ||||||||||| ||||||     
T  6436407 tgagagaaactttagcttctctctaagttgcccttctttttcaatcattaaagaggggtgattttaggtcattttttgacatagaatcacccctctgcac 6436506  T
Q  122 ctttctcccca-ttatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
     ||| ||| || || ||||||||||||||||||||||| ||| |||| |||||||    
T  6436507 atttttcctcatttctttcgatctaaataagtgattttcacacatataaagtttt 6436561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 172
Target Start/End: Original strand, 37994086 - 37994224
Alignment:
Q  34 caacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctt-tctcccca 132  Q
    ||||||||||||| ||| || || ||||||| ||||  ||||||||||||||||||||| |||||||| ||||||||||| ||||||| || | |||||     
T  37994086 caacttctctctaggttttctttctctttcaatcatcgaggaagggtggttttaggtca-tttttgacctagaatcacccctctgcattttgtttcccct 37994184  T
Q  133 ttatttcgatctaaataagtgatttttacatatatcaagt 172  Q
    || ||||||| ||||||||||||||| ||||| |||||||    
T  37994185 ttctttcgatttaaataagtgattttcacatagatcaagt 37994224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 31788253 - 31788449
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||  | || || |  |||  ||||  ||||  || |||||||||| |||||||||| ||||||||||| ||| |    
T  31788253 agtgagagaaactccaacttctctctaaactttctttcttcttcgttcatcgaggagaggcggttttaggtaattttttgacctagaatcacccctctac 31788352  T
Q  120 atctttctcccca--ttatttcgatctaaataagtgatttttacatatatcaagtt-ttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    |||||| | ||||  || |||| |||||||||||||||||| |||| ||||||||| || ||||| |||||||| || |||||||| ||||||||||    
T  31788353 atcttttttcccattttctttcaatctaaataagtgattttcacatctatcaagttgttccttttgtgtttttttgtaatttcgtcgtctaagtgcg 31788449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 7448045 - 7448252
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||| |||||||| ||||||||||||||  | || || || |||  ||||  |||| ||||||||||||||||||||||| | ||||||||||| ||| |    
T  7448045 agtgggagaaactccaacttctctctaaactttctttttccttcgttcatcgaggaggggtggttttaggtcattttttgtcctagaatcacccctctac 7448144  T
Q  120 atctttctcccc-attatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgt 217  Q
    |||||| |||||  || |||| |||||||||| || |||| |||| ||||||| |||| ||||| |||||||| ||||||||||  ||||||||||  ||    
T  7448145 atctttttccccttttctttcaatctaaataaatggttttcacatctatcaagtttttccttttgtgtttttt-gtgatttcgttgtctaagtgcggcgt 7448243  T
Q  218 tgtgatgtt 226  Q
    |||| ||||    
T  7448244 tgtgttgtt 7448252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 7646269 - 7646465
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||| |||||||| ||||||||||||||  | || || || |||  ||||  |||| ||||||||||||||||||||||||| ||||||||||| ||| |    
T  7646269 agtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctac 7646368  T
Q  120 atctttct---ccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    |||||| |   |||  || |||||||||||||||||| |||| |||| || |||| |||| ||||| |||||| | ||||||||||| ||||||||||    
T  7646369 atctttttttccccttttctttcgatctaaataagtggttttcacatctaccaagtttttccttttgtgttttct-gtgatttcgtcgtctaagtgcg 7646465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 213
Target Start/End: Complemental strand, 11985530 - 11985338
Alignment:
Q  22 tgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcat 121  Q
    ||||||||||| ||||||||||||||  | || || ||||||| || |  ||||  |||||||||| |||||||||| || ||||||||||| ||| ||     
T  11985530 tgagagaaactccaacttctctctaaactttctttctctttcattcttcgaggagtggtggttttaagtcattttttaacctagaatcacccctctacaa 11985431  T
Q  122 ctttctcccc-attatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    |||| |||||  || |||| || |||||||||| |||| |||||||||||| |||| ||||| ||| |||| ||||||||||| ||||||||||    
T  11985430 ctttttccccttttctttcaatttaaataagtggttttcacatatatcaagttttttcttttgtgtgtttt-gtgatttcgtcgtctaagtgcg 11985338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 175
Target Start/End: Complemental strand, 18108020 - 18107883
Alignment:
Q  38 ttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatt 137  Q
    ||||||||||||| || || ||||||| ||||| ||||| |||||||||||||||||||||||| ||||||||||  | |||||||||  |||| || ||    
T  18108020 ttctctctaagttttctttctctttcattcattgaggaatggtggttttaggtcattttttgacctagaatcacctctttgcatcttttacccctttctt 18107921  T
Q  138 tcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    || |  |||||||||| |||| ||| ||||||| ||||    
T  18107920 tcaaattaaataagtggttttcacacatatcaattttt 18107883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 19597676 - 19597867
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| |||||| |||||||||| || || |||| ||||||| || | ||| || |||||||| || ||||||| |||||||||||  ||||    
T  19597676 agtgagagaaactccaacttatctctaagttatctttctcttccactcatcaaag-aggatgattttaggttatcttttgacctagaatcaccctcctgc 19597774  T
Q  120 atctttctcccca-ttatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgc 212  Q
    |||||| | | || || |||||||||| |||||||||||  |||||||| |||||||  |||||| || ||| ||||||||||| || ||||||    
T  19597775 atcttttttcgcatttctttcgatctacataagtgatttccacatatattaagtttt-tttttatcttcttttgtgatttcgtcgtccaagtgc 19597867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 212
Target Start/End: Complemental strand, 19062598 - 19062461
Alignment:
Q  76 agggtggttttaggtcattttttgacttagaatcacccatctgcat-ctttctccccattatttcgatctaaataagtgatttttacatatatcaag-tt 173  Q
    ||||||||||||||| |||||||||  ||||||||||| ||| ||| |||| ||||  || |||| ||||||||||||| |||| |||| ||||||| ||    
T  19062598 agggtggttttaggttattttttgaactagaatcacccctctacatcctttttcccttttctttcaatctaaataagtggttttcacatctatcaagttt 19062499  T
Q  174 ttacttttatgttttttcgtgatttcgtcatctaagtgc 212  Q
    || |||||||||||||| ||||| ||||| |||||||||    
T  19062498 ttccttttatgtttttt-gtgatatcgtcgtctaagtgc 19062461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 28718248 - 28718104
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||| |||| |||||| || |||||||| ||||||| || | ||||||||||||||||| ||||||| ||||||||  |||||||    
T  28718248 agtgagagaaactccaact-ctctttaagttttctttatctttaactcattgagaaggggtggttttaggtcat-ttttgacatagaatcattcatctgc 28718151  T
Q  120 atctttctccccattatttcgatctaaataagtgatttttacatata 166  Q
    |||||| | ||| || ||||||  ||||||| ||||||  |||||||    
T  28718150 atcttttttccctttctttcgacataaataactgatttccacatata 28718104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 10237514 - 10237354
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||||   ||||||| |||||| || |  ||||||||||||  || |  |||| |||||||||| |||||||| ||||||||||| ||| |    
T  10237514 agtgagagaaactttg-cttctctttaagttttcttcctctttcactcatcgagtagaggtgattttaggtcaatttttgacctagaatcacccctctac 10237416  T
Q  120 atctttct-ccccattatttcgatctaaataagtgatttttacatatatcaagttttacttt 180  Q
    |||||| | |||| || |||| |||||||||||||||||| ||||| |||||||||| ||||    
T  10237415 atcttttttcccctttctttcaatctaaataagtgattttcacatacatcaagtttttcttt 10237354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 213
Target Start/End: Original strand, 35220182 - 35220317
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagtttta 176  Q
    |||||||||||||| |||||||||| ||||||||||| ||| |||||||  ||||  | ||   ||||||||||||| |||| ||||| ||||||||||     
T  35220182 gggtggttttaggttattttttgacctagaatcacccctctccatcttttcccccccttttcaaatctaaataagtggttttcacataaatcaagttttt 35220281  T
Q  177 cttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
     | || |||||||| ||||||||||| ||||||||||    
T  35220282 ttcttgtgtttttt-gtgatttcgtcgtctaagtgcg 35220317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 226
Target Start/End: Complemental strand, 9169507 - 9169353
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttct--ccccattatttcgatctaaataagtgatttttacatatatca 169  Q
    |||| ||||||||||||||||||||| ||| ||||||||||| ||| ||| ||| |  |||  || |||| ||||||||||||| |||| |||| |||||    
T  9169507 aggaggggtggttttaggtcattttt-gacctagaatcacccctctacatttttttttcccttttctttcaatctaaataagtggttttcacatctatca 9169409  T
Q  170 agttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    |||||| | ||| ||| |||| ||||||||||| ||||||||||  |||||| ||||    
T  9169408 agtttttccttt-tgtgtttttgtgatttcgtcgtctaagtgcggcgttgtgttgtt 9169353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 18763265 - 18763473
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||  | || ||  | ||||  |||  ||||  |||||||||| ||||||||||||| ||||||||||| ||| |    
T  18763265 agtgagagaaactccaacttctctctaaactttctttcaccttcatccatcgaggagaggtggttttatgtcattttttgacctagaatcacccctctac 18763364  T
Q  120 atc-tttctccccattatttcgatctaaataagtgatttttacatatatcaagtttt-acttttatg-ttttttcgtgatttcgtcatctaagtgcgttg 216  Q
    ||| ||| ||||  || |||| ||||||||||||| |||| ||||  ||||||||||  ||||| || |||||| |||||||| || |||||||||| ||    
T  18763365 atcttttttcccttttctttcaatctaaataagtggttttcacat-gatcaagttttctcttttgtgttttttttgtgatttcatcgtctaagtgcggtg 18763463  T
Q  217 ttgtgatgtt 226  Q
    ||||| ||||    
T  18763464 ttgtgttgtt 18763473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 226
Target Start/End: Complemental strand, 27097701 - 27097501
Alignment:
Q  26 agaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatcttt 125  Q
    ||||||| ||||||||||||||  | || || || |||  ||||  |||| ||||| ||||||||||||||||||| ||||||||||| ||| |||||||    
T  27097701 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaatcaccc-tctacatcttt 27097603  T
Q  126 ct--ccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtga 222  Q
     |  |||  || ||| ||||||||||||||| ||| |||  ||||||| |||| ||||| ||||||||| |||||||||| ||||||||||  ||||||     
T  27097602 tttccccttttcttttgatctaaataagtga-tttcacaactatcaagtttttccttttgtgttttttc-tgatttcgtcgtctaagtgcggcgttgtgt 27097505  T
Q  223 tgtt 226  Q
    ||||    
T  27097504 tgtt 27097501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 226
Target Start/End: Complemental strand, 4041839 - 4041689
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccatta-tttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    |||||||||| | ||||  |||||| ||||||||||| ||| ||| ||| | ||| ||  |||| ||||||||||||| |||| |||| |||||||||||    
T  4041839 gggtggttttggatcatactttgacctagaatcacccctctacattttttttcccgtttctttcaatctaaataagtggttttcacatctatcaagtttt 4041740  T
Q  176 ac-ttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
     | |||| |||||||| ||||||||||| ||||||||||| |||||| ||||    
T  4041739 tccttttgtgtttttt-gtgatttcgtcttctaagtgcgtcgttgtgttgtt 4041689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 4778602 - 4778707
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc--tttctccccattatttcgatctaaataagtgatttttacatatatca 169  Q
    |||| ||||||||||||||||||||||||| ||||||||||| ||| ||||  ||| ||||  || |||| || |||||||||| |||| |||| |||||    
T  4778602 aggaggggtggttttaggtcattttttgacctagaatcacccctctacatctttttttcccttttctttcaatttaaataagtggttttcacatctatca 4778701  T
Q  170 agtttt 175  Q
    ||||||    
T  4778702 agtttt 4778707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 6359185 - 6358971
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtca-ttttttgacttagaatcacccatctg 118  Q
    ||||||||||| |||| ||||| ||||||||| | || ||||||||||||  |||   ||||||||||||||| |||||| |  || ||||||  |||||    
T  6359185 agtgagagaaatttcaccttctttctaagttcgctttctctttcactcatcgaggtgaggtggttttaggtcatttttttaagataaaatcacttatctg 6359086  T
Q  119 catc-----tttctcccca-ttatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtg 211  Q
    ||||     ||||| |||| || |||| || |||||||||| ||| ||||||||||||| |||| | ||| |||||||||||||||| ||| ||| ||||    
T  6359085 catcttttttttcttcccatttctttcaatttaaataagtgttttctacatatatcaagttttttcctttgtgttttttcgtgattttgtcgtctgagtg 6358986  T
Q  212 cgttgttgtgatgtt 226  Q
     || |||||| ||||    
T  6358985 tgtcgttgtgttgtt 6358971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 14955358 - 14955476
Alignment:
Q  58 tctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc-tttctccccattatttcgatctaaataagtgatt 156  Q
    ||||||||||||  |||| ||||| ||||| |||| |||||||| |||||||| || |||||||| ||| ||| | || |||| ||||||||||||||||    
T  14955358 tctttcactcatcgaggaggggtgattttaagtcaatttttgacctagaatcatccctctgcatcttttttcctctttctttcaatctaaataagtgatt 14955457  T
Q  157 tttacatatatcaagtttt 175  Q
    |  ||||| ||||||||||    
T  14955458 tccacatacatcaagtttt 14955476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 202
Target Start/End: Complemental strand, 29574897 - 29574750
Alignment:
Q  58 tctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc--tttctccccattatttcgatctaaataagtgat 155  Q
    |||||||||| |  |||| |||||||||||| |||||||||||| ||||||||||| | ||||||  ||| |||   || |||| |||||||||||||||    
T  29574897 tctttcactcgtcgaggaggggtggttttagatcattttttgacctagaatcaccc-tgtgcatccttttttccattttctttcaatctaaataagtgat 29574799  T
Q  156 ttttacatatatcaagttttacttttatgttt--tttcgtgatttcgtc 202  Q
    ||  ||||||||||||| ||  |||| |||||  |||||||||||||||    
T  29574798 ttccacatatatcaagtgttttttttgtgttttgtttcgtgatttcgtc 29574750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 226
Target Start/End: Complemental strand, 36943374 - 36943216
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttct--ccccattatttcgatctaaataagtgatttttacatatatca 169  Q
    |||| ||||||||||||||||||||||||| ||||||||||  ||| ||||||| |  | |  || |||| ||||||||||||  |||| |||| |||||    
T  36943374 aggaggggtggttttaggtcattttttgacctagaatcaccactctacatcttttttcctcttttctttcaatctaaataagtagttttcacatctatca 36943275  T
Q  170 agttttacttt--tatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    ||||||  |||  | | |||||| ||||||||||| ||||||||||  |||||| ||||    
T  36943274 agttttttttttgtttttttttttgtgatttcgtcgtctaagtgcggcgttgtgttgtt 36943216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 42714653 - 42714692
Alignment:
Q  136 tttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42714653 tttcgatctaaataagtgatttttacatatatcaagtttt 42714692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 14423149 - 14423223
Alignment:
Q  79 gtggttttaggtcattttttgacttagaatcacccatctgcatctttctcccca-ttatttcgatctaaataagt 152  Q
    |||||||||||||| |||||||| ||||||||| | ||||||||||||| |||| ||| ||| ||||||||||||    
T  14423149 gtggttttaggtcaatttttgacctagaatcactcgtctgcatctttcttcccatttacttcaatctaaataagt 14423223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 36691789 - 36691866
Alignment:
Q  136 tttcgatctaaataagtgatttttacatatatcaagtttta-cttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    |||| ||||||||||||| |||  ||||||||||||||||  ||||| |||||||||||||||||||| ||||||||||    
T  36691789 tttcaatctaaataagtggtttc-acatatatcaagttttttcttttgtgttttttcgtgatttcgtcgtctaagtgcg 36691866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 212
Target Start/End: Original strand, 38445022 - 38445157
Alignment:
Q  78 ggtggttttaggtcattttttgacttagaatcacccatctgcatctttctcccc--attatttcgatctaaataagtgatttttacatatatcaag-ttt 174  Q
    ||||||||||||||| |||||||  ||||||||||| ||| ||||||| | |||   || |||| || |||||||||| |||| |||| ||||||| |||    
T  38445022 ggtggttttaggtca-tttttgatctagaatcacccctctacatcttttttccctttttctttcaatataaataagtggttttcacatctatcaagtttt 38445120  T
Q  175 tacttttatgttttttcgtgatttcgtcatctaagtgc 212  Q
    | ||||| |||||||| ||||||||||| |||||||||    
T  38445121 ttcttttgtgtttttt-gtgatttcgtcgtctaagtgc 38445157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 7678180 - 7678075
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||  | || || || |||  | ||  | || ||||||||||||||||||||||||| ||||||||||| ||| |    
T  7678180 agtgagagaaactccaacttctctctaaactttctttctccttcgttgatcgatgaggggtggttttaggtcattttttgacctagaatcacccctctac 7678081  T
Q  120 atcttt 125  Q
    ||||||    
T  7678080 atcttt 7678075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 171
Target Start/End: Original strand, 1415418 - 1415514
Alignment:
Q  76 agggtggttttaggtcattttttgacttagaatcacccatctgcatc-tttctccccattatttcgatctaaataagtgatttttacatatatcaag 171  Q
    ||||||||||||||| |||||||||  ||||||||||| ||| |||| ||| ||||  || |||| || ||||||||||||||| ||| ||||||||    
T  1415418 agggtggttttaggttattttttgatctagaatcacccctctacatcttttttcccttttctttcaatttaaataagtgattttcacacatatcaag 1415514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 20146006 - 20145914
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacc 112  Q
    ||||||||||||||||  |||||| |||||| || || |  ||||||||| ||||| |||  |||||||||||||| ||||| ||||||||||    
T  20146006 agtgagagaaacttcacattctctttaagttatctttcttcttcactcatcaaggaggggcagttttaggtcatttattgacatagaatcacc 20145914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 19029151 - 19029070
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttct-ccccattatttcgatctaaataagtgatttt 158  Q
    |||||||||| | |||||||| ||| ||||||||||||||| ||||||| | |||| |  |||||||||||||||||||||||    
T  19029151 gggtggttttggatcattttt-gacctagaatcacccatctccatctttttaccccttcttttcgatctaaataagtgatttt 19029070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 29279755 - 29279678
Alignment:
Q  136 tttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    |||| ||||||||||||| |||| |||||||||||| |||| ||||| |||||||| ||||||||||| ||||| ||||    
T  29279755 tttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgtttttt-gtgatttcgtcgtctaattgcg 29279678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 226
Target Start/End: Complemental strand, 31128964 - 31128875
Alignment:
Q  136 tttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    |||| ||||||||||||| |||| |||||||||||||||| | ||| ||| |||| ||||||||||||| ||| ||||  |||||| ||||    
T  31128964 tttcaatctaaataagtggttttcacatatatcaagtttttccttt-tgtgtttttgtgatttcgtcatttaattgcggcgttgtgttgtt 31128875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 37876848 - 37876743
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctcccc--attatttcgatctaaataagtgatttttacatatatca 169  Q
    |||| |||||||||||||||| |||||||| ||||||||||| | | ||||||| |||||   || |||  ||||||||||||| |||| |||| |||||    
T  37876848 aggaggggtggttttaggtcaatttttgacctagaatcacccttgtacatctttttcccctttttcttttaatctaaataagtggttttcacatctatca 37876749  T
Q  170 agtttt 175  Q
    | ||||    
T  37876748 aatttt 37876743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 12677598 - 12677493
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||  | || || || ||   ||||  |||| |||| |||| ||||||||||||||| ||||||||||| ||| |    
T  12677598 agtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtagtttaaggtcattttttgacctagaatcacccctctac 12677499  T
Q  120 atcttt 125  Q
    ||||||    
T  12677498 atcttt 12677493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 4904330 - 4904255
Alignment:
Q  136 tttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtg 211  Q
    |||| ||||||||||||| |||| |||||||||||| |||| ||||| |||||||| ||||||||||| || |||||    
T  4904330 tttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgtttttt-gtgatttcgtcgtcaaagtg 4904255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 37416501 - 37416576
Alignment:
Q  22 tgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttt 97  Q
    |||||||||||||||||||||||||| || |  |||||||||| || |  | || ||||| |||||||||||||||    
T  37416501 tgagagaaacttcaacttctctctaaattttttttatctttcattcgtcgatgaggggtgattttaggtcattttt 37416576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 39311093 - 39311054
Alignment:
Q  78 ggtggttttaggtcattttttgacttagaatcacccatct 117  Q
    |||| ||||||||||||||||||| |||||||||||||||    
T  39311093 ggtgattttaggtcattttttgacctagaatcacccatct 39311054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 14423237 - 14423307
Alignment:
Q  136 tttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatct 206  Q
    |||| |||||||||||||  ||  |||||||||||||||| ||| | | ||||||| ||||||||||||||    
T  14423237 tttcaatctaaataagtgggttccacatatatcaagtttttcttgtgttttttttcttgatttcgtcatct 14423307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 208
Target Start/End: Complemental strand, 17994960 - 17994831
Alignment:
Q  78 ggtggttttaggtcattttttgacttagaatcacccatctgcatctttctcccca--ttatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    |||||||||||||||||||||| | || |||||||  ||||||||||| | || |  || |||| |||| |||||||| |||| ||| | ||||||||||    
T  17994960 ggtggttttaggtcattttttgccctaaaatcacctctctgcatcttttttcctattttctttcaatcttaataagtggttttcacacaaatcaagtttt 17994861  T
Q  176 acttttatgttttttcgtgatttcgtcatctaa 208  Q
     || || |||||||  ||||||||||| |||||    
T  17994860 -ctattgtgttttt--gtgatttcgtcgtctaa 17994831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 3435880 - 3435808
Alignment:
Q  141 atctaaataagtgatttttacatatatcaagttttacttt--tatgttttttcgtgatttcgtcatctaagtg 211  Q
    |||||||||||||||||||||||| |||||  ||| ||||  ||| |||||||||||||| ||| | ||||||    
T  3435880 atctaaataagtgatttttacatagatcaaaattttctttcatattttttttcgtgattttgtcgtttaagtg 3435808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 110
Target Start/End: Original strand, 11833338 - 11833371
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatca 110  Q
    |||||||||||||||||||||||||||| |||||    
T  11833338 gggtggttttaggtcattttttgacttaaaatca 11833371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 23933809 - 23933745
Alignment:
Q  133 ttatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgattt 198  Q
    ||||||| |||||||||||||| ||| ||||||||||| ||||  | || ||||||||||||||||    
T  23933809 ttatttcaatctaaataagtgactttcacatatatcaa-tttttttcttgtgttttttcgtgattt 23933745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 39311028 - 39310947
Alignment:
Q  145 aaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    ||||||||| |||| |||| ||||||||||| | |||  | ||||| |||||||| ||||||||||| | ||||||| ||||    
T  39311028 aaataagtggttttcacatttatcaagtttttccttttgggttttttgtgatttcatcatctaagtgtggtgttgtgttgtt 39310947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 43 - 226
Target Start/End: Complemental strand, 32192011 - 32191825
Alignment:
Q  43 tctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctcccc--attatttcg 140  Q
    |||||||| || || ||||||| |||| ||||| ||||||||||||||| ||||||||  || |||||||| ||||||||||| |||||   ||||||||    
T  32192011 tctaagttttctttctctttcattcatcaaggaggggtggttttaggtccttttttgatctacaatcacccttctgcatctttttcccccttttatttcg 32191912  T
Q  141 atctaaataagtgatttttacatatatcaagt-tttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    ||||||||||||||||| |||||||||||||| ||| ||||| | |||||||||||||| ||| ||||||||||  |||||| ||||    
T  32191911 atctaaataagtgatttctacatatatcaagtgttttcttttgtattttttcgtgattttgtcgtctaagtgcggcgttgtgttgtt 32191825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 30493322 - 30493525
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| |||| ||||| |||||| || || |||||||||| |  | | ||||||||||| |||||||||||||| ||||||||||||  |||    
T  30493322 agtgagagaaactccaacctctctttaagttttctttttctttcactcgtcgaag-agggtggttttcggtcattttttgacctagaatcaccca--tgc 30493418  T
Q  120 atctttctccccattatttcgatctaaataagtgatttttacatatatcaagt-tttacttttatgttttttcgtgatttcgtcatctaagtgcgttgtt 218  Q
    |||||| | ||| || |||| | |||||||||||||||  ||||||||||||| ||| ||||| || |||||||||||||| || ||| |||||| ||||    
T  30493419 atcttttttccctttctttcaaactaaataagtgatttccacatatatcaagtgttttcttttgtg-tttttcgtgatttcctcgtctgagtgcggtgtt 30493517  T
Q  219 gtgatgtt 226  Q
    ||| ||||    
T  30493518 gtgttgtt 30493525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 1523196 - 1523397
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||  |  ||||||||||||| |  || |||||||| ||| ||||| ||||| |||||||||| |||||||| ||||||||||| |||||    
T  1523196 agtgagagaaactctacattctctctaagttttatttctctttcacacatgaaggaggggtgattttaggtcaatttttgacctagaatcaccc-tctgc 1523294  T
Q  120 atctttctccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttg 219  Q
    || ||| || |  || |||| |||||||||||||||||  ||||| |||||||||| ||    |||||||||||||||||||| ||| ||||||  ||||    
T  1523295 atttttttctcttttctttcaatctaaataagtgatttccacatacatcaagtttttct----tgttttttcgtgatttcgtcgtcttagtgcgacgttg 1523390  T
Q  220 tgatgtt 226  Q
    || ||||    
T  1523391 tgttgtt 1523397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 12170283 - 12170478
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| |||||||||||||   | || || || |||  ||||  |||| ||||||||||||||||||||||||| ||||||||||| ||| |    
T  12170283 agtgagagaaactccaacttctctctagactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctac 12170382  T
Q  120 atctttct--ccccattatttcgatctaaataagtgatttttacatatatcaagttttac-ttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    |||||| |  |||  || |||| ||||||||||||| |||| |||| ||||||||||| | |||| |||||||| ||||||||||| ||||||||||    
T  12170383 atcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttcgttttgtgtttttt-gtgatttcgtcgtctaagtgcg 12170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 76 - 226
Target Start/End: Complemental strand, 3913820 - 3913668
Alignment:
Q  76 agggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccat--tatttcgatctaaataagtgatttttacatatatcaag-t 172  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| | |||||  | |||| ||||||||||||| |||| |||| ||||||| |    
T  3913820 agggtggttttaggtcattttttgacctagaatcacccctccgcatcttttttcccattctctttcaatctaaataagtggttttcacatctatcaagtt 3913721  T
Q  173 tttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    ||| ||||| |||||||| || |||||||| ||||||||||  |||||| ||||    
T  3913720 ttttcttttgtgtttttt-gttatttcgtcgtctaagtgcggcgttgtgttgtt 3913668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 226
Target Start/End: Original strand, 30776511 - 30776661
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctcc-ccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    ||||| |||||||||| |||||||| ||||||||||| ||||||| ||| | | || || |||| |||||||||||| ||||  ||||| ||||||||||    
T  30776511 gggtgattttaggtcaatttttgacctagaatcacccctctgcatattttttctcctttctttcaatctaaataagtaatttccacatacatcaagtttt 30776610  T
Q  176 acttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
     ||||| |||||||||||||||||||| ||| ||||||  |||||| ||||    
T  30776611 tcttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgtt 30776661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 33053470 - 33053262
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||| |||||||| ||||||||||||||  | || || || |||  ||||  |||| ||||||||||||||||||||||||| |||||||| || ||| |    
T  33053470 agtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcatccctctac 33053371  T
Q  120 atctttct--ccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttg 216  Q
    |||||| |  |||  || |||| ||||||||||||| |||| |||| ||||||| |||| ||||| |||||||| ||||||||||| ||||||||||  |    
T  33053370 atcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttt-gtgatttcgtcgtctaagtgcggcg 33053272  T
Q  217 ttgtgatgtt 226  Q
    ||||| ||||    
T  33053271 ttgtgttgtt 33053262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 23128406 - 23128614
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||| ||||||||  |||||||||||||  | || || || |||  ||||| |||| || | |||||||||||||||||||| ||||||||||| ||| |    
T  23128406 agtgggagaaactctaacttctctctaaactttctttctccttcgttcattgaggagggatagttttaggtcattttttgacctagaatcacccctctac 23128505  T
Q  120 atctttctcccca--ttatttcgatctaaataagtgatttttacatatatcaagttttacttttatgt-tttttcgtgatttcgtcatctaagtgcgttg 216  Q
    |||||| ||||||  || ||||  |||||||||||| |||| |||| ||||||||||| | ||| ||| ||||| |||||||| || ||||||||||  |    
T  23128506 atctttttccccattttctttcattctaaataagtggttttcacatctatcaagtttttccttt-tgtattttttgtgatttcatcgtctaagtgcggcg 23128604  T
Q  217 ttgtgatgtt 226  Q
    ||||| ||||    
T  23128605 ttgtgttgtt 23128614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 34018409 - 34018541
Alignment:
Q  81 ggttttaggtcattttttgacttagaatcacccatctgcatctttctcccca--ttatttcgatctaaataagtgatttttacatatatcaag-ttttac 177  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||| | | ||||  || |||| || |||||||||| |||| |||||||||||| |||| |    
T  34018409 ggttttaggtcattttttgacctagaatcacccctctacatctctttacccattttctttcaatttaaataagtggttttcacatatatcaagttttttc 34018508  T
Q  178 ttttatgttttttcgtgatttcgtcatctaagtg 211  Q
    |||| |||||||| ||||||||||| ||||||||    
T  34018509 ttttgtgtttttt-gtgatttcgtcgtctaagtg 34018541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 200
Target Start/End: Complemental strand, 27097912 - 27097737
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgact-tagaatcacccatctg 118  Q
    ||||||||||||||||  ||||||||||||| || || ||||||||||||| |||||| ||||||||||||| ||||||   | ||||||||| ||||||    
T  27097912 agtgagagaaacttcacattctctctaagttttctttctctttcactcattcaggaagagtggttttaggtctttttttttatatagaatcactcatctg 27097813  T
Q  119 catctttctccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcg 200  Q
     ||| || | |   || ||||||||||||||||||||      ||||||||||||||  | || ||||||||||||||||||    
T  27097812 aatcatttttcattttctttcgatctaaataagtgat-----gatatatcaagtttt-ttcttgtgttttttcgtgatttcg 27097737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 58 - 213
Target Start/End: Original strand, 545851 - 546006
Alignment:
Q  58 tctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttct-ccccattatttcgatctaaataagtgatt 156  Q
    ||||||||||||  |||| ||||| ||||||| ||||||| ||| ||||||||| | ||| ||||||| | |||| || |||| |||||||||||  |||    
T  545851 tctttcactcatcgaggaggggtgattttaggccattttt-gacctagaatcactcttctacatcttttttcccctttctttcaatctaaataagcaatt 545949  T
Q  157 tttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    || ||||| |||||||||| ||||  ||||||||||||||||| || ||| ||||||    
T  545950 ttcacatacatcaagtttttctttcgtgttttttcgtgatttcatcgtcttagtgcg 546006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 8102580 - 8102701
Alignment:
Q  94 tttttgacttagaatcacccatctgcatctttct---ccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgtttttt 190  Q
    |||||||| ||||||||||| ||||||| ||| |   | || || |||| |||||||||||||||||| ||| | |||||||||| ||||| ||||||||    
T  8102580 tttttgacctagaatcacccctctgcatattttttttctcctttctttcaatctaaataagtgattttcacaaacatcaagtttttcttttgtgtttttt 8102679  T
Q  191 cgtgatttcgtcatctaagtgc 212  Q
    |||||||||||| ||| |||||    
T  8102680 cgtgatttcgtcgtcttagtgc 8102701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 67 - 210
Target Start/End: Complemental strand, 30608767 - 30608625
Alignment:
Q  67 cattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccatta-tttcgatctaaataagtgatttttacatat 165  Q
    ||||||||| || |||||||||||||||||| ||| ||||||||||| ||| ||| ||| || || ||  |||| |||||||| |||| |||| ||||||    
T  30608767 cattaaggatggatggttttaggtcattttt-gacctagaatcacccctctacatatttttctccttttctttcaatctaaattagtggttttcacatat 30608669  T
Q  166 atcaagttttacttttatgttttttcgtgatttcgtcatctaagt 210  Q
    ||||||||||  |||| | |||||| ||||||||||| |||||||    
T  30608668 atcaagttttcattttgtatttttt-gtgatttcgtcgtctaagt 30608625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 213
Target Start/End: Original strand, 14801624 - 14801803
Alignment:
Q  37 cttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgca---tctttctccccat 133  Q
    |||||||||||||| || |  ||||||||||||  || | ||||| |||||||||| |||||||| |||||| |||| ||||||   | ||| | ||| |    
T  14801624 cttctctctaagttttcttcctctttcactcatcgagaaggggtgattttaggtcaatttttgacctagaataacccctctgcattcttttttttcccct 14801723  T
Q  134 tatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    | |||  ||  ||||||| |||||| ||||| |||||||||| ||||  || ||||||||||||||||| ||| ||||||    
T  14801724 ttttttaattaaaataagggattttcacatacatcaagtttttctttcgtgctttttcgtgatttcgtcgtcttagtgcg 14801803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 211
Target Start/End: Original strand, 32059755 - 32059890
Alignment:
Q  78 ggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagttttac 177  Q
    |||||||||| |||||| |||||| |||||||| || ||| ||||||| ||||  || |||| ||||||||||||  |||| |||| |||||||||||      
T  32059755 ggtggttttaagtcattgtttgacctagaatcatccttctacatctttttcccttttctttcaatctaaataagtagttttcacatgtatcaagtttttt 32059854  T
Q  178 tt--ttatgttttttcgtgatttcgtcatctaagtg 211  Q
    ||  || |||||||| |||||||| || ||||||||    
T  32059855 tttcttctgtttttttgtgatttcttcgtctaagtg 32059890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 221
Target Start/End: Complemental strand, 68297 - 68100
Alignment:
Q  25 gagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcaccca-tctgcatct 123  Q
    |||||||| ||||||||||||||  | || || || |||  ||||  |||| || ||||||||||| |||||| ||| |||||||||||  ||| |||||    
T  68297 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggatggttttaggtaattttt-gacctagaatcaccccctctacatct 68199  T
Q  124 ttctccccatta-tttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtg 221  Q
    || ||||| ||  |||  ||||||||||||| |||| |||| ||||||| |||| ||||| |||||||| ||||||||||| |||||||| | |||||||    
T  68198 ttttccccttttcttttaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttt-gtgatttcgtcgtctaagtgtggtgttgtg 68100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 202
Target Start/End: Complemental strand, 1933960 - 1933814
Alignment:
Q  60 tttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccc--cattatttcgatctaaataagtgattt 157  Q
    ||||||||||  |||| | ||| |||||| |||||||||||| ||||||||| | ||||||| ||| |     | || ||||||||||||||||| ||||    
T  1933960 tttcactcatcgaggatgagtgattttagatcattttttgacctagaatcactcgtctgcatattttttttttccttttttcgatctaaataagttattt 1933861  T
Q  158 ttacatatatcaag-ttttacttttatg-ttttttcgtgatttcgtc 202  Q
    | |||||||||||| |||| ||||| || ||||||||||||||||||    
T  1933860 tcacatatatcaagttttttcttttgtgtttttttcgtgatttcgtc 1933814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 14801032 - 14801151
Alignment:
Q  57 atctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcat-ctttctccccattatttcgatctaaataagtgat 155  Q
    |||||||||||||| ||||  |||| |||||||| | |||||||  ||||||||||| |||| ||  ||| ||||| || |||| |||||||||||| ||    
T  14801032 atctttcactcattgaggagaggtgattttaggttaatttttgatctagaatcacccctctgtatattttttcccctttctttcaatctaaataagtaat 14801131  T
Q  156 ttttacatatatcaagtttt 175  Q
    ||| ||||| ||||||||||    
T  14801132 tttcacatacatcaagtttt 14801151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 20220735 - 20220830
Alignment:
Q  58 tctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtg 153  Q
    ||||||| ||||| |||  || || ||||| ||||||||||||  | ||||||||||||||||||||| ||||| || ||||||| ||||||||||    
T  20220735 tctttcattcattgagggtggatgattttatgtcattttttgatatggaatcacccatctgcatctttttcccctttctttcgatttaaataagtg 20220830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 22114719 - 22114814
Alignment:
Q  58 tctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtg 153  Q
    ||||||| ||||| |||  || || ||||| ||||||||||||  | ||||||||||||||||||||| ||||| || ||||||| ||||||||||    
T  22114719 tctttcattcattgagggtggatgattttatgtcattttttgatatggaatcacccatctgcatctttttcccctttctttcgatttaaataagtg 22114814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 31852474 - 31852371
Alignment:
Q  22 tgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcat 121  Q
    ||||| |||||| ||||||||| |||| |||| || || || |||||| ||||| |||||||||||||| ||| |||  | || ||||||||||||||||    
T  31852474 tgagataaactttaacttctctttaagctctctttctcatttactcatcaaggaggggtggttttaggttattgtttagcctaaaatcacccatctgcat 31852375  T
Q  122 cttt 125  Q
    ||||    
T  31852374 cttt 31852371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 606044 - 606200
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttct--ccccattatttcgatctaaataagtgatttttacatatatc- 168  Q
    |||| ||||| ||||| ||||||||||||| ||| ||||||| ||| ||||||| |  |||  || |||| ||||||||||||| |||| |||| ||||     
T  606044 aggaggggtgattttatgtcattttttgacctaggatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatca 606143  T
Q  169 aagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    || |||| ||||| |||| ||| ||||||||||| ||||||||||  |||||| ||||    
T  606144 aatttttccttttgtgttattt-gtgatttcgtcgtctaagtgcggcgttgtgttgtt 606200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 34222653 - 34222731
Alignment:
Q  89 gtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatat 167  Q
    |||||||||| || ||||||||||| ||| ||||||| ||||| || |||||||||||||||||| |||  ||||||||    
T  34222653 gtcattttttaacctagaatcacccctctacatctttttcccctttctttcgatctaaataagtggtttcaacatatat 34222731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 7976453 - 7976366
Alignment:
Q  33 tcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcat 121  Q
    ||||||| |||||||||| || || | ||||||||||  || | ||||||||||||||||| ||||||| ||||||||| |||||||||    
T  7976453 tcaacttttctctaagttttctttctttttcactcatcgagcatgggtggttttaggtcat-ttttgacctagaatcactcatctgcat 7976366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 22571361 - 22571433
Alignment:
Q  103 tagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    |||||||| |||||||||||||| | ||  || ||| ||||||||||||||||||  ||||||||||||||||    
T  22571361 tagaatcaaccatctgcatcttttttcctcttcttttgatctaaataagtgatttccacatatatcaagtttt 22571433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 127583 - 127652
Alignment:
Q  143 ctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgc 212  Q
    ||||||||||| |||| |||||||||||| |||| ||||| |||||||| ||||||||||| |||||||||    
T  127583 ctaaataagtggttttcacatatatcaagtttttccttttgtgtttttt-gtgatttcgtcgtctaagtgc 127652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 4010802 - 4010704
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctg 118  Q
    |||||||||||||||| |||||||||||||| || || || || | | ||| |||| | |||  ||||| |||||||||||| ||||||||||| ||||    
T  4010802 agtgagagaaacttcatcttctctctaagttttctttctcctttatttattgaggaggagtgactttagatcattttttgacctagaatcacccctctg 4010704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 30894476 - 30894573
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc--tttctccccattatttcgatctaaataagtgatttttacatatat 167  Q
    |||| |||||||||||| |||||||||||| ||||||||||| ||| ||||  ||| ||||  || |||| |||||||||| || |||| ||||||||    
T  30894476 aggaggggtggttttagatcattttttgacctagaatcacccctctacatctgtttttcccttttctttcaatctaaataactggttttcacatatat 30894573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 213
Target Start/End: Complemental strand, 7515501 - 7515309
Alignment:
Q  23 gagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcatttttt-gacttagaatcacccatctgcat 121  Q
    ||||||| || ||||||||||||||  |  | || ||||||  ||||  |||| |||||||||||| | ||||||| ||| ||||||||||| ||| |||    
T  7515501 gagagaagctccaacttctctctaaacttgctttctctttcgttcatcgaggaggggtggttttagattatttttttgacctagaatcacccctctacat 7515402  T
Q  122 ctttctccccattattt--cgatctaaataagtgatttttacatatatcaagttt-tacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
     ||  ||||| || | |  | ||||||||||||| |||| |||| |||||||||| | ||||| |||||||  ||||||||||| ||||||||||    
T  7515401 tttgttcccctttttcttccaatctaaataagtggttttcacatctatcaagtttcttcttttgtgttttt--gtgatttcgtcgtctaagtgcg 7515309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 7876250 - 7876164
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacata 164  Q
    |||||||||| | ||| || ||||| || |||||||||||| ||||||| || |  ||||||| |||||||||||||||||| |||||    
T  7876250 gggtggttttggatcaattattgacctaaaatcacccatcttcatctttttctct-ttatttcaatctaaataagtgattttcacata 7876164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 33109706 - 33109792
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacata 164  Q
    |||||||||| ||||| |||||||| || ||||  |||||| ||||||| || |  ||||||| |||||||||||||||||| |||||    
T  33109706 gggtggttttgggtcaatttttgacctaaaatcgtccatcttcatctttttctct-ttatttcaatctaaataagtgattttcacata 33109792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 7976355 - 7976274
Alignment:
Q  146 aataagtgatttttacatatatcaagt-tttacttttatgtttttt-cgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    ||||||||||||  |||||||| |||| ||| ||||| |||||||| |||||||||||| ||| |||||||||||||| ||||    
T  7976355 aataagtgatttccacatatat-aagtgttttcttttgtgtttttttcgtgatttcgtcgtctgagtgcgttgttgtgttgtt 7976274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 175
Target Start/End: Complemental strand, 26588747 - 26588613
Alignment:
Q  41 tctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcg 140  Q
    |||||||| | || |||||||||||||||  |||| |  ||  ||||||||| |||||||  || |||||||||||| ||| ||| | ||  || |||      
T  26588747 tctctaagctatctttatctttcactcatcgaggatgattgagtttaggtcagtttttgatctataatcacccatcttcattttttttccatttctttta 26588648  T
Q  141 atctaaataagtgatttttacatatatcaagtttt 175  Q
    ||||||||||||| |||  ||||||||||||||||    
T  26588647 atctaaataagtggtttccacatatatcaagtttt 26588613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 8072068 - 8072109
Alignment:
Q  171 gttttacttttatgttttttcgtgatttcgtcatctaagtgc 212  Q
    ||||| ||||| |||||||||||||||||||||||| |||||    
T  8072068 gtttttcttttgtgttttttcgtgatttcgtcatctcagtgc 8072109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 29320112 - 29320059
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatcttt 125  Q
    |||| ||||||||||||||||| ||||||  ||||||||||| ||| |||||||    
T  29320112 aggatgggtggttttaggtcatattttgatctagaatcacccctctacatcttt 29320059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 172
Target Start/End: Original strand, 28981027 - 28981118
Alignment:
Q  80 tggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagt 172  Q
    |||||||||||||||||| ||| |||||| |  | || | |||||| | ||| || |||| |||||||||||||||||  |||||||||||||    
T  28981027 tggttttaggtcattttt-gacctagaattattcttccgtatcttttttccctttctttcaatctaaataagtgatttccacatatatcaagt 28981118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 21290121 - 21289915
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||    |||||||||||||| || |  ||||||||||||  ||||  |||| |||||||||| |||||||| ||||||||||| |||||    
T  21290121 agtgagagaaactctgtcttctctctaagttttcttcctctttcactcatggaggagaggtgattttaggtcaatttttgacctagaatcacccctctgc 21290022  T
Q  120 atctttctccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttg 219  Q
    |||||| | ||| || |||| ||| |||||||||||||| ||||| |||||||||| ||||  |||||||| ||||||||||| ||| ||||||  ||||    
T  21290021 atcttttttccccttctttcaatccaaataagtgattttaacatacatcaagtttttctttcgtgtttttttgtgatttcgtcgtcttagtgcgacgttg 21289922  T
Q  220 tgatgtt 226  Q
    || ||||    
T  21289921 tggtgtt 21289915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 218
Target Start/End: Complemental strand, 50194585 - 50194385
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||||| || || |||||||||| |  || | | |||||||||| |||||||||||| || |||||||  |||||    
T  50194585 agtgagagaaactccaacttctctctaagttttcgttctctttcactcgtcgagaaggagtggttttagatcattttttgacctaaaatcacctctctgc 50194486  T
Q  120 at-ctttctccccattatttcgatctaaataagtgatttttacatatatcaagt-tttacttttatgttttttcgtgatttcgtcatctaagtgcgttgt 217  Q
    || |||| ||||   | |||| |||||||||||||||||  ||||||||||||| ||| ||||| |||||||||||||||||||| ||| |||||| |||    
T  50194485 atcctttttcccttctctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgtctgagtgcggtgt 50194386  T
Q  218 t 218  Q
    |    
T  50194385 t 50194385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 226
Target Start/End: Original strand, 16235244 - 16235413
Alignment:
Q  58 tctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgattt 157  Q
    ||||||||||||| |||| | ||| |||||||||| |||||||| ||||||||| ||||||||||||| | ||  || |||| |||||||||||||||||    
T  16235244 tctttcactcattgaggatgagtgattttaggtcaatttttgacctagaatcactcatctgcatcttttttccttttttttcaatctaaataagtgattt 16235343  T
Q  158 tt-acatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    || ||||| |||||||||| ||||  ||||||||||||||||| || ||| ||||||  |||||| ||||    
T  16235344 ttcacatacatcaagtttttctttcgtgttttttcgtgatttcatcgtcttagtgcgacgttgtgttgtt 16235413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 171
Target Start/End: Complemental strand, 629208 - 629055
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||  |||||||||||||||| || ||  |||||||||||  |||| |||||||||||||||||| |||||| || ||||| || |||||    
T  629208 agtgagagaaactctaacttctctctaagttttccttccctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatcatccttctgc 629109  T
Q  120 atc--tttctccccattatttcgatctaaataagtgatttttacatatatcaag 171  Q
    |||  ||| | ||| || ||||||||||||||||||||||| ||| ||||||||    
T  629108 atcttttttttccccttctttcgatctaaataagtgattttcacaaatatcaag 629055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 10232857 - 10233064
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||| |||||||| ||||||||||||||  | || || || |||  |||| ||||| ||||||||||||||||||||||||| ||||||||||| ||| |    
T  10232857 agtgggagaaactccaacttctctctaaactttctttctccttcgttcatcaaggaggggtggttttaggtcattttttgacctagaatcacccctctac 10232956  T
Q  120 atctttct--ccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgt 217  Q
    |||||| |  |||  || |||| ||||||||||||| |||| || | ||||||||||| | ||| ||| |||| ||||||||||| ||||||||||  ||    
T  10232957 atcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagtttttccttt-tgtgtttttgtgatttcgtcgtctaagtgcggcgt 10233055  T
Q  218 tgtgatgtt 226  Q
    |||| ||||    
T  10233056 tgtgttgtt 10233064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 33579655 - 33579811
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||||||||||||||||||  | || ||||| |||  ||||  | |||||||||||||| ||||||||||||| ||||||||||| ||| |    
T  33579655 agtgagagaaacttcaacttctctctaaactttctttatccttcgttcatcgaagaagggtggttttaagtcattttttgacctagaatcacccctctac 33579754  T
Q  120 atctttctccccatta-tttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    |||||| | ||  ||  |||| |||||||||||||||||| ||||||||| ||||||    
T  33579755 atcttttttccattttctttcaatctaaataagtgattttcacatatatctagtttt 33579811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 226
Target Start/End: Complemental strand, 20465267 - 20465064
Alignment:
Q  21 gtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgca 120  Q
    ||||||||||||||||||||  | ||| || || || || |||| |||| ||| | ||||||||||| ||||||||| ||| ||||||||||| ||| |     
T  20465267 gtgagagaaacttcaacttccttttaaatt-tctttctccttcattcatcaagtaggggtggttttatgtcattttt-gacatagaatcacccctctccc 20465170  T
Q  121 tctttctccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttg 219  Q
    ||||| ||||| || |||| || ||||||||||||||| |||||||||||| |||| ||||| |||||||| |||||||| || |||||||| | |||||    
T  20465169 tctttttcccctttttttcaatataaataagtgattttaacatatatcaagtttttccttttgtgtttttt-gtgatttcatcgtctaagtgaggtgttg 20465071  T
Q  220 tgatgtt 226  Q
    || ||||    
T  20465070 tgttgtt 20465064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 7546397 - 7546601
Alignment:
Q  20 agtgagagaaacttcaa-cttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctg 118  Q
    ||||||||||| ||||| |||||||||||||| || || ||| ||||||||  |||| ||||| |||||||||| |||||||  ||||||||||| ||||    
T  7546397 agtgagagaaa-ttcaatcttctctctaagttttctttctctctcactcatcgaggaggggtgattttaggtcaatttttgatctagaatcacccctctg 7546495  T
Q  119 catc---tttctccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgtt 215  Q
    ||||   ||| ||||| || |||| |||||||||||||||||| ||||| |||||     | | || |||||||||||||||||||| ||| ||||||      
T  7546496 catcttttttttcccccttctttcaatctaaataagtgattttcacatacatcaa-----agtcttgtgttttttcgtgatttcgtcgtcttagtgcgac 7546590  T
Q  216 gttgtgatgtt 226  Q
    |||||| ||||    
T  7546591 gttgtgttgtt 7546601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 40487112 - 40487319
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||  | || || || |||  ||||  |||| ||||| ||||||||||||||||||| ||||||||| | ||| |    
T  40487112 agtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaatcactcttctac 40487211  T
Q  120 atctttctcccc-attatttcgatctaaataagtgatttttacatatatcaagttttacttttatgt-tttttcgtgatttcgtcatctaagtgcgttgt 217  Q
    |||||| |||||  || |||| ||||||||||||| |||| || | | ||||||||| ||||| ||| ||||| ||||||||||| ||||||||||  ||    
T  40487212 atctttttccccttttctttcaatctaaataagtggttttcacttctttcaagtttttctttt-tgtattttttgtgatttcgtcgtctaagtgcggcgt 40487310  T
Q  218 tgtgatgtt 226  Q
    |||| ||||    
T  40487311 tgtgttgtt 40487319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 9797774 - 9797636
Alignment:
Q  78 ggtggttttaggtcattttttgacttagaatcacccatctgcatctttct---ccccattatttcgatctaaataagtgatttttacatatatcaagttt 174  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| |   | |  || |||| ||||||||||||| |||| |||| ||||||||||    
T  9797774 ggtggttttaggtcattttttgacctagaatcacccctctacatcttttttttctcttttctttcaatctaaataagtggttttcacatctatcaagttt 9797675  T
Q  175 -tacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
     ||||||| |||||||| ||||||||||| ||||||||||    
T  9797674 ctacttttgtgtttttt-gtgatttcgtcgtctaagtgcg 9797636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 211
Target Start/End: Original strand, 29921856 - 29922033
Alignment:
Q  37 cttctctctaagttctcattatctttcactcattaaggaagggtggtttt-aggtcattttttgacttagaatcacccatctgcatctttct-ccccatt 134  Q
    |||||||||||||| || || ||||||| || |  |||| |||||||||| ||||||||||||||  || ||||||   ||| ||||||| | |||| ||    
T  29921856 cttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcacttctctccatcttttttccccttt 29921955  T
Q  135 atttcgatctaaataagtgatttttacatatatcaagt-tttacttttatgttttttcgtgatttcgtcatctaagtg 211  Q
     |||| |||||||||||||||||  ||||||||||||| ||| ||||| |||||||||||||||||||| ||| ||||    
T  29921956 ctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgtctgagtg 29922033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 211
Target Start/End: Original strand, 29971009 - 29971186
Alignment:
Q  37 cttctctctaagttctcattatctttcactcattaaggaagggtggtttt-aggtcattttttgacttagaatcacccatctgcatctttct-ccccatt 134  Q
    |||||||||||||| || || ||||||| || |  |||| |||||||||| ||||||||||||||  || ||||||   ||| ||||||| | |||| ||    
T  29971009 cttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcacttctctccatcttttttccccttt 29971108  T
Q  135 atttcgatctaaataagtgatttttacatatatcaagt-tttacttttatgttttttcgtgatttcgtcatctaagtg 211  Q
     |||| |||||||||||||||||  ||||||||||||| ||| ||||| |||||||||||||||||||| ||| ||||    
T  29971109 ctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgtctgagtg 29971186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 213
Target Start/End: Complemental strand, 6954992 - 6954803
Alignment:
Q  26 agaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatcttt 125  Q
    ||||||| ||||||||||||||  | || || || |||  ||| | |||| ||||| ||||||||||||||||||| ||||||||||| ||| |||||||    
T  6954992 agaaactccaacttctctctaaactttctttctccttcgttcactgaggaggggtgattttaggtcattttttgacctagaatcacccctctacatcttt 6954893  T
Q  126 ct--ccccattatttcgatctaaataagtgatttttacatatatcaagttttac-ttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
     |  |||  || |||| |||||||||||||  ||| |||| ||||||||||| | |||| |||||||| ||||||||||| ||||||||||    
T  6954892 tttccccttttctttcaatctaaataagtgggtttcacatctatcaagtttttcattttgtgtttttt-gtgatttcgtcgtctaagtgcg 6954803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 79 - 226
Target Start/End: Complemental strand, 36461674 - 36461525
Alignment:
Q  79 gtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattat--ttcgatctaaataagtgatttttacatatatcaag-tttt 175  Q
    ||||||||||||||||||||||| || | |||||| ||| ||||||| | ||| || |  ||| |||||||||||||||||| |||| ||||||| ||||    
T  36461674 gtggttttaggtcattttttgacctatattcacccctctacatcttttttccccttttctttcaatctaaataagtgattttcacatctatcaagttttt 36461575  T
Q  176 acttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
     ||||| |||||||| ||||||||||| ||||||||||  |||||| ||||    
T  36461574 tcttttgtgtttttt-gtgatttcgtcgtctaagtgcggcgttgtgttgtt 36461525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 45568746 - 45568539
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||  | || || || |||  ||||  |||| ||||||||||||||||||||||||  |||||| | |||||| |    
T  45568746 agtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgatctagaataatccatctac 45568647  T
Q  120 atctttct--ccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttg 216  Q
    |||||| |  |||  || |||| ||||||||||||  |||| |||| ||||||| |||| ||||| |||||||  ||||||||||| ||||||||||  |    
T  45568646 atcttttttccccttttctttcaatctaaataagttgttttcacatctatcaagttttttcttttctgttttt--gtgatttcgtcgtctaagtgcggcg 45568549  T
Q  217 ttgtgatgtt 226  Q
    ||||| ||||    
T  45568548 ttgtgttgtt 45568539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 47895938 - 47896131
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||  | || || || |||  ||||  |||| |||||||| ||| |||||||||||| ||||||||||| ||| |    
T  47895938 agtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttatagatcattttttgacctagaatcacccctctac 47896037  T
Q  120 atctttctccccattat--ttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtg 211  Q
    |||||| | | | || |  ||| ||||||||||||| |||| |||||||||||| |||| ||||| |||||||| ||||||||||| || |||||    
T  47896038 atcttttttctctttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgtttttt-gtgatttcgtcgtcaaagtg 47896131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 9998253 - 9998461
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtca-ttttttgacttagaatcacccatctg 118  Q
    |||| |||||||| ||||||||||||||  | || || || |||  ||||  |||| |||||||||||||||| ||||||||| ||||||||||| |||     
T  9998253 agtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttgacctagaatcacccctcta 9998352  T
Q  119 catctttct--ccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttg 216  Q
    ||||||| |  |||  || |||| ||||||||||||| |||| || | ||||||||||| | ||| ||| |||| ||||||||||| ||||||||||  |    
T  9998353 catcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagtttttcattt-tgtgtttttgtgatttcgtcgtctaagtgcggcg 9998451  T
Q  217 ttgtgatgtt 226  Q
    ||||| ||||    
T  9998452 ttgtgttgtt 9998461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 202
Target Start/End: Original strand, 53508047 - 53508192
Alignment:
Q  58 tctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccatta-tttcgatctaaataagtgatt 156  Q
    |||||| ||||| |||||| |||||| ||||||||||||| ||| || |||||||||||||| ||||| | ||  ||  |||| || |||||||||||||    
T  53508047 tctttcgctcatcaaggaatggtggtcttaggtcattttt-gacctaaaatcacccatctgcgtcttttttcctttttctttcaatataaataagtgatt 53508145  T
Q  157 tttacatatatcaag-ttttacttttatgttttttcgtgatttcgtc 202  Q
    || |||||||||||| |||| ||| | ||||||||||||||||||||    
T  53508146 ttcacatatatcaagttttttcttctgtgttttttcgtgatttcgtc 53508192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 21431412 - 21431606
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||| |||||||| ||||||||||||||  | || || || |||  ||||  |||| ||||||||||||||||||||| ||| || |||||||| ||| |    
T  21431412 agtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttt-gacctaaaatcacccctctac 21431510  T
Q  120 atctttctccccattat--ttcgatctaaataagtgatttttacatatatcaagttttacttttatgt-tttttcgtgatttcgtcatctaagtgcg 213  Q
    |||||| | |||||| |  ||| ||||||||||||| |||| |||| ||||||||||| ||||| ||| ||||| ||||||||| | ||||||||||    
T  21431511 atcttttttcccattttctttcaatctaaataagtggttttcacatctatcaagtttttctttt-tgtgttttttgtgatttcgccgtctaagtgcg 21431606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 213
Target Start/End: Original strand, 8914508 - 8914686
Alignment:
Q  37 cttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc--tttctccccatt 134  Q
    |||||||||||||| || |  ||||||||||||  || | ||||| |||||||||| |||||||| |||||| |||| ||||||||  ||| | ||| ||    
T  8914508 cttctctctaagttttcttcctctttcactcatcgagaaggggtgattttaggtcaatttttgacctagaataacccctctgcatcttttttttcccctt 8914607  T
Q  135 atttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
     |||  ||  ||||||| |||||| ||||| |||||||||| ||||  || ||||||||||||||||| ||| ||||||    
T  8914608 tttttaattaaaataagggattttcacatacatcaagtttttctttcgtgctttttcgtgatttcgtcgtcttagtgcg 8914686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 14859287 - 14859362
Alignment:
Q  23 gagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcatttttt 98  Q
    |||||||||||||||||||||||||||| ||||| | ||||||| ||| |||| ||||| ||||||||||||||||    
T  14859287 gagagaaacttcaacttctctctaagttttcattctttttcacttattgaggaggggtgattttaggtcatttttt 14859362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 3785706 - 3785788
Alignment:
Q  86 taggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatc 168  Q
    |||||||||||||||||||||||||| ||||||||||||| | ||  || |||| ||  ||||||||||||||||||||||||    
T  3785706 taggtcattttttgacttagaatcacacatctgcatcttttttccgtttctttcaattcaaataagtgatttttacatatatc 3785788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 217
Target Start/End: Original strand, 42460571 - 42460731
Alignment:
Q  58 tctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattat--ttcgatctaaataagtgat 155  Q
    ||||||||| ||  |||| || || |||||||||| |||||||| || ||||| | |||||||||||| | ||| || |  ||| |||||||||||||||    
T  42460571 tctttcacttatcgaggagggatgattttaggtcagtttttgacctaaaatcatcaatctgcatcttttttccccttttctttcaatctaaataagtgat 42460670  T
Q  156 ttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgt 217  Q
    ||  ||||| |||||||||| ||||  || ||||||||||||||||| ||| ||||||||||    
T  42460671 ttccacatacatcaagtttttctttcgtg-tttttcgtgatttcgtcgtcttagtgcgttgt 42460731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 209
Target Start/End: Complemental strand, 12050947 - 12050759
Alignment:
Q  23 gagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc 122  Q
    |||||||||| |||||||||||||| || || || || |||  |||| ||||| | ||||||||| || ||||||||| |||||||||||| ||| ||||    
T  12050947 gagagaaactccaacttctctctaaattttctttctccttcgttcatcaaggatgtgtggttttaagttattttttgatttagaatcacccctctacatc 12050848  T
Q  123 tt-tctcccc--attatttcgatctaaataagtgatttttacatatatcaagtttta-cttttatgttttttcgtgatttcgtcatctaag 209  Q
    || | |||||   || |||  ||||| ||||||| |||| |||| |||||||||||| ||||| |||||||  ||||||||||| ||||||    
T  12050847 ttctttcccctttttctttaaatctagataagtggttttcacatctatcaagttttatcttttgtgttttt--gtgatttcgtcgtctaag 12050759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 51303923 - 51303780
Alignment:
Q  37 cttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttct-ccccatta 135  Q
    |||||||||||||| || |  ||||| ||||||  |||| || || ||||| |||| |||||||| ||||||||||| ||||||||||| | |||| ||     
T  51303923 cttctctctaagttttcttcctcttttactcatcgaggagggatgattttatgtcaatttttgacctagaatcaccc-tctgcatcttttttcccctttt 51303825  T
Q  136 tttcgatctaaataagtgatttttacatatatcaagttttacttt 180  Q
    |||| ||| |||||||||||||| ||||| |||||||||| ||||    
T  51303824 tttcaatccaaataagtgattttcacatacatcaagtttttcttt 51303780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 10108077 - 10108230
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttct--ccccattatttcgatctaaataagtgatttttacatatatca 169  Q
    |||| ||||||||||||||||  ||||||| ||||||||||| ||| ||||||| |  |||  || |||| ||||||||||||| |||| || | |||||    
T  10108077 aggaggggtggttttaggtca--ttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatca 10108174  T
Q  170 agttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    |||||| | ||| ||| |||| ||||||||||| ||||||||||  |||||| ||||    
T  10108175 agtttttccttt-tgtgtttttgtgatttcgtcgtctaagtgcggcgttgtgttgtt 10108230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 38545622 - 38545712
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatca 110  Q
    ||||||||||||||||||||||||||||  | || || || |||  ||||| ||||  |||||||||||||||||||||||| ||||||||    
T  38545622 agtgagagaaacttcaacttctctctaaactttctttctccttcgttcattgaggagtggtggttttaggtcattttttgacctagaatca 38545712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 40556550 - 40556706
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc--tttctccccattatttcgatctaaataagtgatttttacatatatca 169  Q
    |||| ||||||||||||||||||||||||| ||||||||||| ||  ||||  ||| ||||  || ||| ||| |||||||||| |||| | || |||||    
T  40556550 aggaggggtggttttaggtcattttttgacctagaatcacccctccacatctttttttcccttttcttttgatataaataagtggttttcatatctatca 40556649  T
Q  170 agtttt-acttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    ||||||  ||||| |||||| | ||||||||||| ||||||||||  |||||| ||||    
T  40556650 agttttcccttttgtgttttat-gtgatttcgtcgtctaagtgcggcgttgtgttgtt 40556706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 47042354 - 47042197
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||| ||||||| ||||||||||||||  | |  ||||| |||  ||||  |||| |||||||||||||||||||||| || || |||||||| ||| |    
T  47042354 agtgaaagaaactccaacttctctctaaactttatttatccttcgttcatcgaggaggggtggttttaggtcattttttaacctataatcacccctctac 47042255  T
Q  120 atc--tttctccccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    |||  ||| ||||  || |||| || ||||||||||||||| |||||||||| |||||    
T  47042254 atctttttttcccttttctttcaatttaaataagtgattttcacatatatcatgtttt 47042197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 213
Target Start/End: Original strand, 54148827 - 54148972
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttct--ccccattatttcgatctaaataagtgatttttacatatatca 169  Q
    |||| ||||||||||||||||||||||||| || |||||||| ||| ||||||| |  | |  || |||| ||||||||||||| |||| |||| |||||    
T  54148827 aggaggggtggttttaggtcattttttgacctacaatcacccctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatctatca 54148926  T
Q  170 ag-ttttacttttat-gttttttcgtgatttcgtcatctaagtgcg 213  Q
    || |||| ||||| |  |||||| ||||||||||| ||||||||||    
T  54148927 agttttttcttttgtattttttttgtgatttcgtcgtctaagtgcg 54148972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 31272109 - 31271901
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagg-gtggttttaggtcattttttgacttagaatcacccatctg 118  Q
    ||||||||||||| ||||||||||||||||| || || || |||  ||||  |||| || ||| |||||||| ||||||| || |||||||| || | |     
T  31272109 agtgagagaaactccaacttctctctaagttttctttttccttcgttcatcgaggagggtgtgattttaggttattttttaacctagaatcatcccttta 31272010  T
Q  119 catc-tttctccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttg 216  Q
    |||| ||| ||||| || | || |||||||||| || |||| |||| ||||||| |||| ||||| |||||||| |||||||| || |||||||||| |     
T  31272009 catcttttgtcccctttctatcaatctaaataaatggttttcacatttatcaagttttttcttttgtgtttttt-gtgatttcttcgtctaagtgcggtt 31271911  T
Q  217 ttgtgatgtt 226  Q
    ||||| ||||    
T  31271910 ttgtgttgtt 31271901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 35865235 - 35865026
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||||||||||||||||||  | || || || |||  || |  |||| ||||||||||||||||||||| ||  || ||||| || ||| |    
T  35865235 agtgagagaaacttcaacttctctctaaactttctttctccttcgttcctcgaggaggggtggttttaggtcattttt-gatctaaaatcatccttctac 35865137  T
Q  120 atctttctccccattat--ttcgatctaaataagtgatttttacatatatcaagttttacttttatgtttt--ttcgtgatttcgtcatctaagtgcgtt 215  Q
    |||||| | ||  || |  ||| ||||||||||||  |||| |||||||||||||||| ||||| ||||||  || ||||||||||| ||||| ||||      
T  35865136 atcttttttcctcttttctttcaatctaaataagtagttttcacatatatcaagtttttcttttgtgttttaatttgtgatttcgtcgtctaattgcggc 35865037  T
Q  216 gttgtgatgtt 226  Q
    |||||| ||||    
T  35865036 gttgtgttgtt 35865026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 7449201 - 7449010
Alignment:
Q  22 tgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcat 121  Q
    ||||||||||| ||||||||||| || || |  || ||||||  |||||||||| || |||||||||||||||||||||| |||||||  || ||| |||    
T  7449201 tgagagaaactccaacttctctcaaacttttt-ttctctttcgttcattaaggagggctggttttaggtcattttttgacatagaatcgtccctctacat 7449103  T
Q  122 ctttct--ccccattatttcgatctaaataagtgatttttacatatatcaagtttt-acttttatgttttttcgtgatttcgtcatctaagtgc 212  Q
    |||| |  | |  || |||| ||||||||||||| ||||  ||| |||||||||||  |||||  ||||||| ||||||| ||| |||||||||    
T  7449102 cttttttcctcttttctttcaatctaaataagtggttttcgcatctatcaagttttcccttttgagtttttt-gtgattttgtcgtctaagtgc 7449010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 7457343 - 7457152
Alignment:
Q  22 tgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcat 121  Q
    ||||||||||| ||||||||||| || || |  || ||||||  |||||||||| || |||||||||||||||||||||| |||||||  || ||| |||    
T  7457343 tgagagaaactccaacttctctcaaacttttt-ttctctttcgttcattaaggagggctggttttaggtcattttttgacatagaatcgtccctctacat 7457245  T
Q  122 ctttct--ccccattatttcgatctaaataagtgatttttacatatatcaagtttt-acttttatgttttttcgtgatttcgtcatctaagtgc 212  Q
    |||| |  | |  || |||| ||||||||||||| ||||  ||| |||||||||||  |||||  ||||||| ||||||| ||| |||||||||    
T  7457244 cttttttcctcttttctttcaatctaaataagtggttttcgcatctatcaagttttcccttttgagtttttt-gtgattttgtcgtctaagtgc 7457152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 213
Target Start/End: Complemental strand, 12150032 - 12149891
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaag 171  Q
    |||| ||||||||||| || |||||||||| || |||||||| ||| || |||| |  |  || |||  | ||||||||||| |||||||||||||| ||    
T  12150032 aggaggggtggttttaagttattttttgacctataatcacccctctacacctttttttcttttcttttaagctaaataagtggtttttacatatatccag 12149933  T
Q  172 -ttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
     |||| ||||| || ||||| ||||||||||||||||||||||    
T  12149932 tttttgcttttgtgattttt-gtgatttcgtcatctaagtgcg 12149891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 211
Target Start/End: Complemental strand, 43488834 - 43488699
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattat--ttcgatctaaataagtgatttttacatatatcaag-tt 173  Q
    |||||| |||||||| ||||||||| ||||||||||| ||| ||||||| | ||| || |  ||| ||||||||||||| |||| |||| ||||||| ||    
T  43488834 gggtgggtttaggtc-ttttttgacctagaatcacccctctacatcttttttccctttttctttcaatctaaataagtggttttcacatctatcaagttt 43488736  T
Q  174 ttacttttatgttttttcgtgatttcgtcatctaagtg 211  Q
    || | ||| |||||||| ||||||||||| ||||||||    
T  43488735 tttcatttgtgtttttt-gtgatttcgtcgtctaagtg 43488699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 10229313 - 10229470
Alignment:
Q  72 aggaagggtggttttaggtcatttttt--gacttagaatcacccatctgcatctttctccccattat--ttcgatctaaataagtgatttttacatatat 167  Q
    |||| ||||||||||||||| ||||||  ||| ||||||||||  ||| ||||||| | ||| || |  ||| ||||||||||||| |||| || | |||    
T  10229313 aggaggggtggttttaggtcttttttttggacctagaatcaccactctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctat 10229412  T
Q  168 caagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    |||||||| | ||| ||| |||| ||||||||||| ||||||||||  |||||| ||||    
T  10229413 caagtttttccttt-tgtgtttttgtgatttcgtcttctaagtgcggcgttgtgttgtt 10229470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 29249098 - 29249186
Alignment:
Q  87 aggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    |||||| |||||||| |||||||||   ||| ||||||| ||| | ||  ||||||||||||||||| |||| ||||||||||||||||    
T  29249098 aggtcactttttgacctagaatcacttctcttcatctttttcctctttcgttcgatctaaataagtgtttttcacatatatcaagtttt 29249186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 43016642 - 43016737
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtca--ttttttgacttagaatcaccc 113  Q
    |||||||||||||  ||||||||||||| || || || ||||||  ||||  |||||||||||||||||||||  | ||||||| |||||||||||    
T  43016642 agtgagagaaactctaacttctctctaaattttctttctctttcgttcatcgaggaagggtggttttaggtcagttcttttgacctagaatcaccc 43016737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 213
Target Start/End: Complemental strand, 48650985 - 48650841
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttct---ccccattatttcgatctaaataagtgatttttacatatatc 168  Q
    |||| ||||||||||||||||||||||||| || |||||||| ||  ||||||| |   |||  || |||| ||||  ||||||| |||| |||| ||||    
T  48650985 aggaggggtggttttaggtcattttttgacctaaaatcacccctcgacatctttttttccccttttctttcaatctgtataagtggttttcacatctatc 48650886  T
Q  169 aag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    ||| |||| ||||| |||||||| ||||||| ||| ||||||||||    
T  48650885 aagtttttccttttgtgtttttt-gtgattttgtcgtctaagtgcg 48650841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 32701342 - 32701392
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttct 127  Q
    ||||||||||||||||||||||||| |||||||| || ||| |||||||||    
T  32701342 gggtggttttaggtcattttttgacctagaatcatccctctacatctttct 32701392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 52923411 - 52923262
Alignment:
Q  26 agaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatcttt 125  Q
    ||||||| ||||||||||||||  | || || || |||  ||||| ||||  ||| |||||| ||||||||| ||| ||||||||||| ||| |||||||    
T  52923411 agaaactccaacttctctctaaactttctttctccttcgttcattgaggagaggtagttttaagtcattttt-gacctagaatcacccctctacatcttt 52923313  T
Q  126 ctccccatta-tttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
     | ||| ||  |||| ||||||||||||| |||| |||| |||||||||||    
T  52923312 tttcccttttctttcaatctaaataagtggttttcacatctatcaagtttt 52923262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 213
Target Start/End: Complemental strand, 23800154 - 23800017
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattat--ttcgatctaaataagtgatttttacatatatcaagttt 174  Q
    |||||||||||||| |||||||||| || ||| || | ||| ||||||| | ||  || |  ||| ||||||||||||| ||||||||||||||||||||    
T  23800154 gggtggttttaggttattttttgacctaaaattactcttctacatcttttttcctcttttctttcaatctaaataagtggtttttacatatatcaagttt 23800055  T
Q  175 -tacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
       ||||| |||||||  ||||||||||| ||||| ||||    
T  23800054 gcccttttttgttttt--gtgatttcgtcgtctaattgcg 23800017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 38142358 - 38142463
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||  |||| | |||||| || || ||||||| |||| ||| | | ||| |||||| |||||||||||| || |||||| |||||||    
T  38142358 agtgagagaaactccacattctttttaagttttctttctctttcattcatcaagaatgagtgattttagttcattttttgacctaaaatcactcatctgc 38142457  T
Q  120 atcttt 125  Q
    ||||||    
T  38142458 atcttt 38142463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 44960128 - 44960052
Alignment:
Q  144 taaataagtgatttttacatatatcaagttttac-ttttatgttttttcgtgatttcgtcatctaagtgcgttgttgt 220  Q
    |||||||||| |||| |||| ||| ||||||| | ||||||||||||| ||||||||||| |||||||||| ||||||    
T  44960128 taaataagtggttttcacatctattaagtttttccttttatgtttttt-gtgatttcgtcgtctaagtgcggtgttgt 44960052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 53808164 - 53808096
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttag 88  Q
    ||||||||||||| ||||||||||||||||| || || |||||| |||||  |||| ||||| ||||||    
T  53808164 agtgagagaaactccaacttctctctaagttttccttctctttcgctcatcgaggaggggtgattttag 53808096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 27706409 - 27706342
Alignment:
Q  144 taaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtg 211  Q
    ||||||||||||||| ||||| ||||  |||| ||||  |||||||||||||||||||| ||| ||||    
T  27706409 taaataagtgattttcacatacatcagatttttctttcgtgttttttcgtgatttcgtcgtcttagtg 27706342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 46934512 - 46934598
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacata 164  Q
    |||||||||| ||||| |||||||| |  |||||||| ||| |||||||||| |  | ||||| |||||||||||||||||| |||||    
T  46934512 gggtggtttttggtcaatttttgacctgaaatcacccctcttcatctttctctctct-atttcaatctaaataagtgattttcacata 46934598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 20987975 - 20987898
Alignment:
Q  144 taaataagtgatttttacatatatcaagtttta-cttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtg 221  Q
    ||||||||||||||| | ||||||| ||||||  ||||| |||||||| ||||||||||| ||||| |||| |||||||    
T  20987975 taaataagtgattttcaaatatatcgagttttttcttttgtgtttttt-gtgatttcgtcgtctaattgcggtgttgtg 20987898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 175
Target Start/End: Complemental strand, 52116253 - 52116156
Alignment:
Q  78 ggtggttttaggtcattttttgacttagaatcacccatctgcatctttctc-cccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    ||||||| |||||| |||||| || ||||||||  ||||||||||||| |  ||| || |||  || ||||||||||||||| ||||||||||||||||    
T  52116253 ggtggttgtaggtc-ttttttaacctagaatcattcatctgcatctttttttccctttgttttaatttaaataagtgattttcacatatatcaagtttt 52116156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 4178434 - 4178514
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttt 158  Q
    |||||||||| ||||| || ||||| || |||||||||||| ||||||| | | |  |||||| ||||||||||||||||||    
T  4178434 gggtggttttgggtcaattcttgacctaaaatcacccatcttcatcttt-ttctctctatttcaatctaaataagtgatttt 4178514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 4821651 - 4821696
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatc 122  Q
    ||||||||||||||||||||||||| || |||||| | ||||||||    
T  4821651 gggtggttttaggtcattttttgacctataatcactcctctgcatc 4821696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 22290847 - 22290908
Alignment:
Q  141 atctaaataagtgatttttacatata-tcaagttttacttttatgttttttcgtgatttcgt 201  Q
    |||||||||||||||||| ||||||| | || |||| ||||| ||||||||| |||||||||    
T  22290847 atctaaataagtgattttcacatatattaaatttttccttttgtgttttttcatgatttcgt 22290908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 4396572 - 4396495
Alignment:
Q  79 gtggttttaggtcatttttt-gacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgattt 157  Q
    |||||||||||| ||||||| ||| |||||||||||  |||||||||| | ||| || |||| || ||||||||||||||    
T  4396572 gtggttttaggttatttttttgacctagaatcaccc--ctgcatcttttttccccttctttcaatttaaataagtgattt 4396495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 166
Target Start/End: Original strand, 45424669 - 45424746
Alignment:
Q  85 ttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatata 166  Q
    |||||||||| |||||| ||||||||| ||||| ||||||| | |||    |||| ||||||||||||| |||||| |||||    
T  45424669 ttaggtcattctttgacctagaatcactcatctacatcttttttccc----tttcaatctaaataagtggtttttatatata 45424746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 5e-34; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 226
Target Start/End: Complemental strand, 51888516 - 51888308
Alignment:
Q  22 tgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcat 121  Q
    |||||||||||||||||| |||||| ||| || || ||||||||||||  |||| ||||||||||||||||||||||||| | ||||||||| |||  ||    
T  51888516 tgagagaaacttcaacttttctctacgttttctttctctttcactcatcgaggaggggtggttttaggtcattttttgacattgaatcacccctctcaat 51888417  T
Q  122 c-tttctccccattatttcgatctaaataagtgatttttacatatatcaagt-tttacttttatg--ttttttcgtgatttcgtcatctaagtgcgttgt 217  Q
    | ||| ||||| || || ||||||||| |||||||||| ||||||||||||| ||| ||||| ||  |||||||||||||||||  ||| ||||||  ||    
T  51888416 cttttatcccctttcttccgatctaaacaagtgattttcacatatatcaagtgttttcttttgtgttttttttcgtgatttcgttgtctgagtgcggcgt 51888317  T
Q  218 tgtgatgtt 226  Q
    |||| ||||    
T  51888316 tgtgttgtt 51888308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 2520584 - 2520787
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||  | || || || |||  ||||  |||| ||||||||||||||||||||||||| ||||||||||| ||| |    
T  2520584 agtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctac 2520683  T
Q  120 atctttctccccattat--ttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttg 216  Q
    |||||| | ||| || |  ||| ||||||||||||| |||| |||| ||||||| |||| ||||| |||||||| ||||||||||| |||||||||| ||    
T  2520684 atcttttttccccttttcgttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgtttttt-gtgatttcgtcgtctaagtgcggtg 2520782  T
Q  217 ttgtg 221  Q
    |||||    
T  2520783 ttgtg 2520787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 36161579 - 36161711
Alignment:
Q  78 ggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagttttac 177  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||  || |||| |||||||||||||||||||||||||||||| ||||      
T  36161579 ggtggttttaggtcattttttgacctagaatcacccatctgcat-tttttcccatttctttcaatctaaataagtgatttttacatatatcaattttt-- 36161675  T
Q  178 ttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    |||| |||||||| |||||||| || ||| ||||||    
T  36161676 ttttgtgtttttttgtgatttcttcgtctgagtgcg 36161711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 171
Target Start/End: Complemental strand, 47320703 - 47320551
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||||||||||||| |||||| || || |||||| |||||  || | |||||||||||||||||| ||||||||| ||||||   |||||    
T  47320703 agtgagagaaacttcaacttctctttaagttttccttctctttcgctcatcgagaaggggtggttttaggtcattctttgacttaaaatcacaactctgc 47320604  T
Q  120 atc-tttctccccattatttcgatctaaataagtgatttttacatatatcaag 171  Q
    ||| ||| ||||| ||  |||||||||||||||||||||| ||| ||||||||    
T  47320603 atcttttttcccctttcgttcgatctaaataagtgattttcacaaatatcaag 47320551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 9643184 - 9643359
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcat-taaggaagggtggttttaggtcattttttgacttagaatcacccatctg 118  Q
    ||||||||||||| ||||||||||||||||| || ||||||||  |||||  |||   ||||||||||| ||||||||||||| ||||||||| ||||||    
T  9643184 agtgagagaaactccaacttctctctaagttttctttatcttttgctcatcgaagagggggtggttttatgtcattttttgacctagaatcactcatctg 9643283  T
Q  119 catc----tttctccccattatttcgatctaaataagtgatttttacatatatcaagt-tttacttttatgttttt 189  Q
    ||||    ||| ||||  || ||||||||||||||||||||||| |||||||||| || ||| ||||| |||||||    
T  9643284 catctttttttttcccatttctttcgatctaaataagtgattttcacatatatcatgtgttttcttttgtgttttt 9643359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 26633972 - 26633765
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||  | || || |  |||  ||||| |||| ||||||| ||||||||||||||||| ||||||||||| | | |    
T  26633972 agtgagagaaactccaacttctctctaaactttctttcttcttcgttcattgaggaggggtggtcttaggtcattttttgacctagaatcacccctatac 26633873  T
Q  120 atctttctcc-ccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgt 217  Q
    |||||| ||| |  || |||| ||||||||||||| |||| |||| ||||||| |||| ||||| |||||||| ||||||||||| ||||||||||  ||    
T  26633872 atctttttcctcttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgtttttt-gtgatttcgtcgtctaagtgcggcgt 26633774  T
Q  218 tgtgatgtt 226  Q
    |||| ||||    
T  26633773 tgtgttgtt 26633765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 226
Target Start/End: Original strand, 32766378 - 32766529
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattat--ttcgatctaaataagtgatttttacatatatcaagttt 174  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||||| | ||| || |  ||| |||||| |||||| |||| |||| ||||||||||    
T  32766378 gggtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaagtaagtgtttttcacatctatcaagttt 32766477  T
Q  175 tacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    | | ||| || ||||| ||||||||||| |||||||||| ||||||| ||||    
T  32766478 ttcctttttggttttttgtgatttcgtcgtctaagtgcggtgttgtgttgtt 32766529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 37 - 180
Target Start/End: Original strand, 27651772 - 27651916
Alignment:
Q  37 cttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctcccca-tta 135  Q
    ||||||||||| || || |  ||||||||||||  |||| ||||| | |||||||| |||||||| ||| ||||||||||||||||||| | |||| ||     
T  27651772 cttctctctaaattttcttcctctttcactcatcgaggaggggtgatgttaggtcaatttttgacctaggatcacccatctgcatcttttttcccatttc 27651871  T
Q  136 tttcgatctaaataagtgatttttacatatatcaagttttacttt 180  Q
    |||| |||||||||||||||||| ||||| |||||||||| ||||    
T  27651872 tttcaatctaaataagtgattttcacatacatcaagtttttcttt 27651916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 22039099 - 22038921
Alignment:
Q  21 gtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgca 120  Q
    ||||||||||||| ||||| | || ||||| || || ||||||||||||  || | |||||||||||||||| |||| ||  ||||||||||| | ||||    
T  22039099 gtgagagaaactttaacttttttcaaagttttctttctctttcactcatcgagcaggggtggttttaggtcaattttggatctagaatcaccc-tttgca 22039001  T
Q  121 tctttctccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgtttt-ttcgtgattt 198  Q
    ||||| | ||| || |||| |||||||||||||||||| |||| ||||||| |||| ||||| |||||| ||||||||||    
T  22039000 tcttttttccctttctttctatctaaataagtgattttcacatctatcaagttttttcttttgtgttttattcgtgattt 22038921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 226
Target Start/End: Complemental strand, 4143004 - 4142849
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttct--ccccattatttcgatctaaataagtgatttttacatatatca 169  Q
    |||| ||||||||||||||||||||||||| ||||||||||| ||| ||||||| |  |||  || |||| ||||||||||||| |||| |||| |||||    
T  4143004 aggaggggtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtg-ttttcacatctatca 4142906  T
Q  170 ag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    || |||| ||||| |||||||| ||||||||||| ||||||||||  |||||| ||||    
T  4142905 agtttttccttttgtgtttttt-gtgatttcgtcgtctaagtgcggcgttgtgttgtt 4142849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 13633921 - 13634130
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||  | || || || ||| |||||  ||||  ||||||||||||||| |||||||| ||||||||||| ||| |    
T  13633921 agtgagagaaactccaacttctctctaaactttctttctccttcgctcatcgaggagtggtggttttaggtca-tttttgacatagaatcacccctctac 13634019  T
Q  120 atcttt----ctccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgt 214  Q
    ||||||    | |||  || |||| ||||||||||||| |||| |||| ||||||| |||| ||||| |||||||| ||||||||||| ||||||||||     
T  13634020 atcttttccccccccttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgtttttt-gtgatttcgtcgtctaagtgcgg 13634118  T
Q  215 tgttgtgatgtt 226  Q
     |||||| ||||    
T  13634119 cgttgtgttgtt 13634130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 22611043 - 22611198
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttct--ccccattatttcgatctaaataagtgatttttacatatatca 169  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||| ||||||| |  |||  || |||| ||||||||||||| |||| |||| |||||    
T  22611043 aggaggggtggttttaggtcattttt-gacctagaatcacccatctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatca 22611141  T
Q  170 agttt-tacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    ||||| | ||||| |||||||| ||||||||||| ||||||||||  |||||| ||||    
T  22611142 agtttatccttttgtgtttttt-gtgatttcgtcgtctaagtgcggcgttgtgttgtt 22611198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 226
Target Start/End: Original strand, 35348170 - 35348322
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccatta-tttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    ||||| ||||||||||||||||||| ||||||||||  ||| ||||||| | ||| ||  |||| ||||||||||||| |||| ||| ||||||||||||    
T  35348170 gggtgattttaggtcattttttgacctagaatcacctctctacatcttttttcccttttctttcaatctaaataagtggttttcacaaatatcaagtttt 35348269  T
Q  176 acttttatg--ttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
     ||||| ||  |||||| ||||||||||| ||||||||||  |||||| ||||    
T  35348270 tcttttgtgtttttttttgtgatttcgtcgtctaagtgcggcgttgtgttgtt 35348322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 230
Target Start/End: Original strand, 43510010 - 43510216
Alignment:
Q  24 agagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc- 122  Q
    |||||||||||||||||||| |||  | ||||| || |||  ||||  | |||||||||||||||||||||||||||| ||||||||| | ||| ||||     
T  43510010 agagaaacttcaacttctctttaaactttcattctccttcgttcatcgaagaagggtggttttaggtcattttttgacctagaatcactcctctacatct 43510109  T
Q  123 -tttctccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtg 221  Q
     ||| ||||  || |||| |||||||||||||  ||| |||| ||||||||||| | |||  ||||||| ||||||||||| ||||||||||  ||||||    
T  43510110 ttttttcccttttctttcaatctaaataagtggctttcacatttatcaagtttttccttt-cgtttttt-gtgatttcgtcgtctaagtgcggcgttgtg 43510207  T
Q  222 atgtttgtc 230  Q
     | ||||||    
T  43510208 ttatttgtc 43510216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 213
Target Start/End: Original strand, 53810887 - 53811030
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctcccc--attatttcgatctaaataagtgatttttacatatatca 169  Q
    |||| ||||||||||||||||||||||||| || |||||||| ||| ||||||| |||||   || |||| || ||||||||||||||| |||| |||||    
T  53810887 aggaggggtggttttaggtcattttttgacctataatcacccctctacatctttttcccccttttctttcaatttaaataagtgattttcacatctatca 53810986  T
Q  170 agtt-ttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    |||| || ||||| |||||||| || |||||||||||||| ||||    
T  53810987 agttattccttttgtgtttttt-gtcatttcgtcatctaaatgcg 53811030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 5119145 - 5119354
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttg-acttagaatcacccatctg 118  Q
    ||||||| ||| |||||||||| |||||  | |  || || |||| |||| ||||| ||||||||||| ||||||||||  || ||||||||||| |||     
T  5119145 agtgagataaatttcaacttctttctaaactttatttctccttcattcatcaaggaggggtggttttatgtcattttttttacctagaatcacccctcta 5119244  T
Q  119 catctttctccccat--tatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgtt 215  Q
    ||||||| ||||| |  | |||| ||||||||||||| |||| |||||||||||| |||| ||||| |||||| | ||||||||||| |||||||||| |    
T  5119245 catctttttccccctcttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgttttgt-gtgatttcgtcgtctaagtgcggt 5119343  T
Q  216 gttgtgatgtt 226  Q
     ||||| ||||    
T  5119344 attgtgttgtt 5119354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 19853813 - 19853606
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||| |||||||| ||||||||||||||  | || ||  | |||| ||||  |||| ||||||||||||||||||||| ||| ||||||||||| ||| |    
T  19853813 agtgggagaaactccaacttctctctaaactttctttccccttcattcatcgaggaggggtggttttaggtcattttt-gacctagaatcacccctctac 19853715  T
Q  120 atctttctccccattattt--cgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttg 216  Q
    |||||| | ||| || | |  | ||||||||||||| |||| |||| ||||||| |||| ||||| |||||||| ||||||||||| ||||||||||  |    
T  19853714 atcttttttccccttttcttccaatctaaataagtggttttcacatctatcaagttttttcttttttgtttttt-gtgatttcgtcgtctaagtgcggcg 19853616  T
Q  217 ttgtgatgtt 226  Q
    ||||| ||||    
T  19853615 ttgtgttgtt 19853606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 153
Target Start/End: Complemental strand, 22064082 - 22063948
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||||| ||||||||||||||| | || | |||||||||| ||||| |  |  ||||||||||||||||||| ||||||||||| |||||    
T  22064082 agtgagagaaacttcaccttctctctaagttcgctttctatttcactcatcaaggatgactaattttaggtcattttttgacctagaatcacccctctgc 22063983  T
Q  120 at-ctttctccccattatttcgatctaaataagtg 153  Q
    ||  ||| || || || |||| |||||||||||||    
T  22063982 atattttttctcctttctttcaatctaaataagtg 22063948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 213
Target Start/End: Original strand, 9178165 - 9178355
Alignment:
Q  21 gtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgca 120  Q
    |||||||||||||||  ||||||||||  | || || || |||| |||| ||||| ||||||| ||||||||||||||||| ||||||||||| ||| ||    
T  9178165 gtgagagaaacttcagtttctctctaaaatttctttctccttcattcatcaaggaggggtggtcttaggtcattttttgacctagaatcacccttctaca 9178264  T
Q  121 tc--tttctccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    ||  ||||||||  || |||| |||||||||| || |||| ||||||   |||| ||  |||| || ||||| |||||||| |||||||||||||    
T  9178265 tctttttctcccttttctttcaatctaaataaatggttttcacatat---aagtgtttattttgtgcttttt-gtgatttcatcatctaagtgcg 9178355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 211
Target Start/End: Original strand, 47158054 - 47158227
Alignment:
Q  39 tctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctcccca--ttat 136  Q
    ||||| ||||||| | |||||||||||||||  | || || || ||||| |||||||||| |||||||||||| ||| ||||||||| |   ||  || |    
T  47158054 tctctttaagttcactttatctttcactcatcgatgatggatgattttacgtcatttttt-acttagaatcactcatttgcatcttttttttcactttct 47158152  T
Q  137 ttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtg 211  Q
    ||| || ||||||||||||||  |||||||||||| |||| ||||| |||||||| ||||||||||||||||||||    
T  47158153 ttcaatttaaataagtgatttccacatatatcaagttttttcttttgtgtttttt-gtgatttcgtcatctaagtg 47158227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 36204682 - 36204482
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||| |||| || |||||||||| ||| || || ||||||| |||| ||||| || ||||||||||||||||||| || ||||||||||| |||||    
T  36204682 agtgagaggaactccaccttctctctaggttttctttctctttcaatcatcaaggatggatggttttaggtcatttttt-acctagaatcacccctctgc 36204584  T
Q  120 atctt-tctccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgtt 218  Q
    || || | |||   || ||||||| ||||||||||||||  ||||| ||||||| ||  |||    ||| |||||||||||||| ||||||||||  |||    
T  36204583 attttgtttcctttttctttcgatttaaataagtgatttccacatagatcaagtgtt--ttt----tttcttcgtgatttcgtcgtctaagtgcggcgtt 36204490  T
Q  219 gtgatgtt 226  Q
    ||| ||||    
T  36204489 gtgttgtt 36204482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 22300655 - 22300805
Alignment:
Q  23 gagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcat- 121  Q
    |||||||||| |||||||||||||| || |  || |||||||||| |  |||| | ||||||||||||||||||||||| || |||||||| | |||||     
T  22300655 gagagaaactccaacttctctctaaattttatttctctttcactcgtcgaggaggagtggttttaggtcattttttgacctaaaatcacccctttgcatc 22300754  T
Q  122 ctttctccccattatttcgatctaaataagtgatttttacatatatcaagt 172  Q
    |||| || |  || |||| || ||||||||||||||| || ||||||||||    
T  22300755 ctttttctcttttctttcaatttaaataagtgattttcacgtatatcaagt 22300805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 21686542 - 21686348
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||| |||||||||||||  | || || || ||   ||||  |||| ||||||||| ||||| ||||||||| || |||||||| ||| |    
T  21686542 agtgagagaaactttaacttctctctaaactttctttctcctttgttcatcgaggaggggtggtttgaggtc-ttttttgacctaaaatcacccctctac 21686444  T
Q  120 atctttctccccattat--ttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    |||||| | ||| || |  ||| ||||||||||||| |||| |||| ||||||| |||| ||||| |||||||| ||||||||||| ||||||||||    
T  21686443 atcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttt-gtgatttcgtcgtctaagtgcg 21686348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 22558764 - 22558609
Alignment:
Q  23 gagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc 122  Q
    |||||||||| ||| ||||||||||  | || || || |||  ||||| |||| ||||||||||||||||||||||||| ||||||||||  ||| ||||    
T  22558764 gagagaaactccaatttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcacctctctacatc 22558665  T
Q  123 tttctcccc---attatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    ||| | |||    || |||| ||||||||||||| |||| |||| |||||||||||    
T  22558664 ttttttcccctttttctttcaatctaaataagtggttttcacatctatcaagtttt 22558609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 18935594 - 18935749
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||    |||||||||||||| || |  |||||| |||||  |||| ||||| ||| |||||| |||||||| ||||||||||| |||||    
T  18935594 agtgagagaaactctgtcttctctctaagttttcttcctctttcgctcatcgaggaggggtgatttaaggtcaatttttgacctagaatcaccc-tctgc 18935692  T
Q  120 atc-tttctccccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    ||| ||| ||||| || |||  |||||||| ||||||||| ||||| ||||||||||    
T  18935693 atcttttttcccctttcttttaatctaaattagtgattttcacatacatcaagtttt 18935749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 52978746 - 52978838
Alignment:
Q  133 ttatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    ||||||| |||||||||||||||||| |||||||||||||||| | |||  ||||||| ||||||||| | ||||||||||  |||||| ||||    
T  52978746 ttatttcaatctaaataagtgattttcacatatatcaagtttttcctttgggtttttt-gtgatttcggcgtctaagtgcggcgttgtgttgtt 52978838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 211
Target Start/End: Complemental strand, 12199951 - 12199802
Alignment:
Q  61 ttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgattttta 160  Q
    |||| ||||| ||||| |||||| ||| ||||||||| ||| ||||||||||||||||||||||| ||||| || |||| || || ||| ||| |||| |    
T  12199951 ttcattcattgaggaatggtggtattaagtcattttt-gacatagaatcacccatctgcatctttttcccctttctttcaatttacatatgtggttttca 12199853  T
Q  161 catatatcaagttttacttttatgt-tttttcgtgatttcgtcatctaagtg 211  Q
    || ||| |||||||| || || ||| ||||| ||||||||||| ||| ||||    
T  12199852 cacatagcaagtttt-ctattttgtgttttttgtgatttcgtcgtctgagtg 12199802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 213
Target Start/End: Complemental strand, 9165344 - 9165153
Alignment:
Q  21 gtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcat-tttttgacttagaatcacccatctgc 119  Q
    |||||||||||| ||||||||||||||  | || || ||  ||| ||||  ||||  |||||||||||||||| ||||| || ||||||||||| ||| |    
T  9165344 gtgagagaaactccaacttctctctaaactttctttttccatcattcatcgaggagaggtggttttaggtcatattttttacctagaatcacccctctac 9165245  T
Q  120 atctttctccccattat--ttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    |||||| || || ||||  ||| ||||||||||||| |||| ||||||   |||| || ||||| || ||||| |||| ||||||||| |||||||    
T  9165244 atctttttctcccttatctttcaatctaaataagtggttttcacatat---aagtgtttcttttgtgcttttt-gtgaattcgtcatccaagtgcg 9165153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 56040890 - 56040753
Alignment:
Q  78 ggtggttttaggtcatttttt-gacttagaatcacccatctgcatctttctccccattatt---tcgatctaaataagtgatttttacatatatcaagtt 173  Q
    ||||||||||||||||||||| ||| ||||||||||| ||| ||||||| | ||| || ||   || ||||||||||||| |||| |||| |||||||||    
T  56040890 ggtggttttaggtcatttttttgacctagaatcacccctctacatcttttttccccttcttctttcaatctaaataagtggttttcacatctatcaagtt 56040791  T
Q  174 ttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    ||  |||  ||| |||| ||||||||||| | ||||||||    
T  56040790 tt--tttcttgtgtttttgtgatttcgtcgtttaagtgcg 56040753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 9713708 - 9713871
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtc-------attttttgacttagaatcacc 112  Q
    |||||||||||||  | ||||||||||||||||| || ||||||||||||  |||| ||||| ||||| |||        |||||| || |||||||||     
T  9713708 agtgagagaaactctaccttctctctaagttctctttctctttcactcatcgaggaggggtgattttatgtctttttttttttttttacctagaatcact 9713807  T
Q  113 catctgcatc-tttctccccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
      ||| |||| ||| ||||| || |||| |||||||||||||||||  ||||||||||||||||    
T  9713808 tctctacatcttttttcccctttctttcaatctaaataagtgatttccacatatatcaagtttt 9713871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 36194520 - 36194681
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||| ||   |||||||||||||| || |  ||||||||| ||  |||| ||||| |||||| ||| |||||||| || || || || |||||    
T  36194520 agtgagagaaattttgtcttctctctaagttttcttcctctttcacttatcgaggatgggtgattttagatcaatttttgacctaaaaacatccctctgc 36194619  T
Q  120 atc-tttctccccattatttcgatctaaataagtgatttttacatatatcaagttttacttt 180  Q
    ||| ||| || || || |||| || ||||||||||||||| ||||| |||||||||| ||||    
T  36194620 atcttttttctcctttctttcaatttaaataagtgattttcacatacatcaagtttttcttt 36194681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 48257699 - 48257647
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctt 124  Q
    |||| ||||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  48257699 aggaggggtggttttatgtcattttttgacctagaatcacccatctacatctt 48257647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 48351482 - 48351376
Alignment:
Q  21 gtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttga--cttagaatcacccatctg 118  Q
    ||||||| |||| |||||||||| | ||||||| || | |||||||||| ||||| |||| |||||||||| |||||| |  | ||||||||||||||||    
T  48351482 gtgagagcaactccaacttctctttcagttctctttct-tttcactcatcaaggaggggtagttttaggtcgtttttttaaccctagaatcacccatctg 48351384  T
Q  119 catctttc 126  Q
    ||| ||||    
T  48351383 catttttc 48351376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 168
Target Start/End: Complemental strand, 10359751 - 10359661
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatc 168  Q
    |||||||||| ||||| |||||||| |  ||||||||| || ||||||| || |  | |||||||||||||||||||||||| |||||||||    
T  10359751 gggtggttttgggtcaatttttgacctgaaatcacccaacttcatctttttctctct-atttcgatctaaataagtgattttaacatatatc 10359661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 173
Target Start/End: Complemental strand, 24099315 - 24099217
Alignment:
Q  78 ggtggttttaggtcatttttt-gacttagaatcacccatctgcatctttctccccattat--ttcgatctaaataagtgatttttacatatatcaagtt 173  Q
    ||||||||||||||||||||| ||| |||||||| || ||| ||||||| | ||| || |  ||| |||||||||||||||||| |||| |||||||||    
T  24099315 ggtggttttaggtcatttttttgacctagaatcatccctctacatcttttttccccttttctttcaatctaaataagtgattttcacatctatcaagtt 24099217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 33920984 - 33921066
Alignment:
Q  144 taaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    ||||||||||||||| |||||||||||| |||| ||||| || ||||| ||||||||||| ||||||||||  |||||| ||||    
T  33920984 taaataagtgattttcacatatatcaagttttttcttttgtgcttttt-gtgatttcgtcgtctaagtgcggcgttgtgttgtt 33921066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 9634599 - 9634653
Alignment:
Q  136 tttcgatctaaataagtgatttttacatatatcaagt-tttacttttatgttttt 189  Q
    ||||||||||||||||||||||| |||||||||| || ||| |||||||||||||    
T  9634599 tttcgatctaaataagtgattttcacatatatcatgtgttttcttttatgttttt 9634653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 17949499 - 17949414
Alignment:
Q  145 aaataagtgatttttacatatatcaagttttac-ttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtttgtc 230  Q
    ||||||||| |||| ||| |||||||||||| | |||| |||||||| ||||||||||| ||||||||||  |||||| ||||||||    
T  17949499 aaataagtggttttcacacatatcaagtttttccttttgtgtttttt-gtgatttcgtcgtctaagtgcggcgttgtgttgtttgtc 17949414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 17953351 - 17953266
Alignment:
Q  145 aaataagtgatttttacatatatcaagttttac-ttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtttgtc 230  Q
    ||||||||| |||| ||| |||||||||||| | |||| |||||||| ||||||||||| ||||||||||  |||||| ||||||||    
T  17953351 aaataagtggttttcacacatatcaagtttttccttttgtgtttttt-gtgatttcgtcgtctaagtgcggcgttgtgttgtttgtc 17953266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 206
Target Start/End: Original strand, 37030145 - 37030256
Alignment:
Q  94 tttttgacttagaatcacccatctgcatcttt-ctccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcg 192  Q
    ||||| |||||||||||||| | ||||||||| ||| || || |||| || ||||||| ||||||| ||| ||||||||||||  | || ||| |||| |    
T  37030145 ttttttacttagaatcacccctttgcatcttttctctcctttctttcaatttaaataaatgattttcacacatatcaagtttt--tattgtgtctttttg 37030242  T
Q  193 tgatttcgtcatct 206  Q
    ||||||||||||||    
T  37030243 tgatttcgtcatct 37030256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 6155422 - 6155327
Alignment:
Q  127 tccccattatttcgatctaaataagtgatttttacatatatcaagtttt--acttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtg 221  Q
    ||||| || ||||||| ||||||| ||||||||||| || |||| ||||  |||||| ||||||| |||||||||||| ||| |||||| |||||||    
T  6155422 tcccctttttttcgatttaaataaatgatttttacaaatttcaaattttttacttttgtgttttt-cgtgatttcgtcgtctgagtgcggtgttgtg 6155327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 220
Target Start/End: Original strand, 45418392 - 45418535
Alignment:
Q  79 gtggttttaggtcattttttgacttagaatcacccatctgca--tctttctccccattatttcgatctaaataagtgatttttacatatatcaag-tttt 175  Q
    ||||||||||||||||||||||| |||||||| || ||| ||  |||||  | |  || | || || |||||||| | |||| |||||||||||| ||||    
T  45418392 gtggttttaggtcattttttgacctagaatcatccctctacacctcttttcctcttttctctcaatataaataagaggttttcacatatatcaagttttt 45418491  T
Q  176 acttttatgttttttcgtgatttcgtcatctaagtgcgttgttgt 220  Q
     ||||| |||||||| ||||||||||| ||||||| || ||||||    
T  45418492 ccttttgtgtttttt-gtgatttcgtcgtctaagtacggtgttgt 45418535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 37188795 - 37188700
Alignment:
Q  79 gtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    |||||||| ||||| || ||||| |  |||||| ||||| ||||||| || | || ||||| |||||||||||||||||| ||||||||| ||||||    
T  37188795 gtggttttgggtcaattattgacctgaaatcactcatcttcatctttttctctat-atttcaatctaaataagtgattttcacatatatctagtttt 37188700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 7393215 - 7393258
Alignment:
Q  160 acatatatcaagtt-ttacttttatgttttttcgtgatttcgtc 202  Q
    |||||||||||||| || ||||||||||||||||||||||||||    
T  7393215 acatatatcaagttgtttcttttatgttttttcgtgatttcgtc 7393258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 208
Target Start/End: Complemental strand, 10259136 - 10259008
Alignment:
Q  80 tggttttaggtcattttttgacttagaatcacccatctgcatc--tttctccccattatttcgatctaaataagtgatttttacatatatcaagttttac 177  Q
    |||||||||||||||||| ||| || |||||||| ||| ||||  ||| || |  || |||||||||||| || || |||| |||||||||||||||| |    
T  10259136 tggttttaggtcattttt-gacctaaaatcacccctctacatcgttttttctcttttctttcgatctaaacaaatggttttcacatatatcaagttttcc 10259038  T
Q  178 ttttatgttttttcgtgatttcgtcatctaa 208  Q
     ||| ||  |||| |||||||||||||||||    
T  10259037 cttt-tgagtttttgtgatttcgtcatctaa 10259008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 29120556 - 29120470
Alignment:
Q  127 tccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgt-tttttcgtgatttcgtcatctaagtgcg 213  Q
    ||||| ||||||| ||||||||||||| |||| |||||||||   |||| ||||| ||| ||||| ||||||||||| ||||||||||    
T  29120556 tcccctttatttcaatctaaataagtggttttcacatatatccgatttttctttt-tgtgttttttgtgatttcgtcgtctaagtgcg 29120470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 168
Target Start/End: Original strand, 43444277 - 43444367
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatc 168  Q
    |||| ||||| ||||| |||||||  |  |||||||||||| ||||||| || |  ||||||| |||||||||||||||||| |||||||||    
T  43444277 gggtagttttgggtcaatttttgatctgaaatcacccatcttcatctttttctct-ttatttcaatctaaataagtgattttcacatatatc 43444367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 55227827 - 55227906
Alignment:
Q  45 taagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctt 124  Q
    ||||||||| || ||||||||||||| |  | | |||||||||||| |||||||||| |||||| | |||||| ||||||    
T  55227827 taagttctctttctctttcactcatttattaggagtggttttaggtgattttttgacctagaattatccatctacatctt 55227906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 13863164 - 13863193
Alignment:
Q  79 gtggttttaggtcattttttgacttagaat 108  Q
    ||||||||||||||||||||||||||||||    
T  13863164 gtggttttaggtcattttttgacttagaat 13863193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 18048754 - 18048831
Alignment:
Q  79 gtggttttaggtcatttttt-gacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgattt 157  Q
    |||||||||||| ||||||| ||| |||||||||||  |||||||||| | ||| || |||| || ||||||||||||||    
T  18048754 gtggttttaggttatttttttgacctagaatcaccc--ctgcatcttttttccccttctttcaatttaaataagtgattt 18048831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 21223744 - 21223712
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttct 52  Q
    |||||||||||||||| ||||||||||||||||    
T  21223744 agtgagagaaacttcatcttctctctaagttct 21223712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 21248483 - 21248515
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttct 52  Q
    |||||||||||||||| ||||||||||||||||    
T  21248483 agtgagagaaacttcatcttctctctaagttct 21248515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 21248670 - 21248638
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttct 52  Q
    |||||||||||||||| ||||||||||||||||    
T  21248670 agtgagagaaacttcatcttctctctaagttct 21248638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 22806350 - 22806425
Alignment:
Q  22 tgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcatttttt 98  Q
    ||||||||||||||  |||||||| ||||||| || |  |||||||||| ||| |||||| ||||| ||||||||||    
T  22806350 tgagagaaacttcacattctctcttagttctctttcttcttcactcattgagg-agggtgtttttatgtcatttttt 22806425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 29121920 - 29121876
Alignment:
Q  80 tggttttaggtcattttttgacttagaatcacccatctgcatctt 124  Q
    |||||||||||||||||||||| || |||||| ||||| ||||||    
T  29121920 tggttttaggtcattttttgacctaaaatcactcatctacatctt 29121876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 29961109 - 29961033
Alignment:
Q  136 tttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtg 211  Q
    |||| |||||||||||||||||| |||| ||||||| |||| ||||| ||||||||  | ||||| || ||||||||    
T  29961109 tttcaatctaaataagtgattttcacatctatcaagtttttccttttgtgttttttttttatttcatcgtctaagtg 29961033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 38166417 - 38166381
Alignment:
Q  136 tttcgatctaaataagtgatttttacatatatcaagt 172  Q
    |||||||||||| |||||||||| |||||||||||||    
T  38166417 tttcgatctaaacaagtgattttcacatatatcaagt 38166381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 15279 - 15486
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||||||||||||||||||  | || || || |||  || |  |||| ||||||||||||||||||||||||| ||||||||||| ||| |    
T  15279 agtgagagaaacttcaacttctctctaaactttctttctccttcgttcttcgaggaggggtggttttaggtcattttttgacctagaatcacccctctac 15378  T
Q  120 atctttctcccc-attatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgt 217  Q
    |||||| |||||  || |||| ||||||||||||| |||| | || | ||||| |||| ||||| |||||||| |||||||||||||||||||||| |||    
T  15379 atctttttccccttttctttcaatctaaataagtggttttcatatctttcaagtttttccttttgtgtttttt-gtgatttcgtcatctaagtgcggtgt 15477  T
Q  218 tgtgatgtt 226  Q
    |||| ||||    
T  15478 tgtgttgtt 15486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 7e-33; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 39567082 - 39567289
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||  |  ||||||| |||||| || |  ||||||||||||  |||| ||||| |||||||||| |||||||| ||||||||| | |||||    
T  39567082 agtgagagaaacaccgtcttctctttaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacgcctctgc 39567181  T
Q  120 atctttctccccatta-tttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgtt 218  Q
    |||||| ||||| ||  |||| |||||||||||||||||| ||||| |||||||||| ||||  |||||||||||||| ||||| ||| ||||||  |||    
T  39567182 atctttttccccctttctttcaatctaaataagtgattttcacatacatcaagtttttctttcgtgttttttcgtgatctcgtcgtcttagtgcgacgtt 39567281  T
Q  219 gtgatgtt 226  Q
    ||| ||||    
T  39567282 gtgttgtt 39567289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 226
Target Start/End: Complemental strand, 2979576 - 2979407
Alignment:
Q  58 tctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccc-cattatttcgatctaaataagtgatt 156  Q
    ||||||||||||  |||| ||||| |||||||||| |||||||| || |||||||| ||||||||||| | || | || |||| ||||||||||||||||    
T  2979576 tctttcactcatcgaggaggggtgattttaggtcaatttttgacctataatcacccctctgcatcttttttcctctttctttcaatctaaataagtgatt 2979477  T
Q  157 tttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    || ||||| |||||||||| ||||  |||||||||||||||||||| ||| ||||||  |||||| ||||    
T  2979476 ttcacatacatcaagtttttctttcgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgtt 2979407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 38597584 - 38597791
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||  | || || || |||  ||||  |||| |||||||||||||| |||||||||| ||||||||||| ||| |    
T  38597584 agtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggttattttttgacctagaatcacccctctac 38597683  T
Q  120 atc-tttctccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgt 217  Q
    ||| ||| |||| ||| |||| || ||||||||||||||| |||| ||||||| |||| ||||| || ||||| ||||||||||| ||||||||||  ||    
T  38597684 atcttttttccctattctttcaatttaaataagtgattttcacatctatcaagtttttccttttgtgcttttt-gtgatttcgtcgtctaagtgcggcgt 38597782  T
Q  218 tgtgatgtt 226  Q
    |||| ||||    
T  38597783 tgtgttgtt 38597791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 6012440 - 6012232
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||| |||||||| ||||||||||||||  | || || || |||  ||||| |||| ||||||||||||||||||||||||| ||||||||||| ||| |    
T  6012440 agtgggagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcacccctctac 6012341  T
Q  120 atc--tttctccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttg 216  Q
    |||  ||| ||||  || |||| ||||||||||||| |||| || | ||||||| |||| ||||| |||||||| |||||||| || |||||||||| ||    
T  6012340 atctttttttcccttttctttcaatctaaataagtgtttttcacgtctatcaagtttttccttttgtgtttttt-gtgatttcatcgtctaagtgcggtg 6012242  T
Q  217 ttgtgatgtt 226  Q
    ||||| ||||    
T  6012241 ttgtgttgtt 6012232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 14211020 - 14211173
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||    |||||||||||||| || |  ||||||||||||  |||| ||||| |||||||||| |||||||| ||||||||||| |||||    
T  14211020 agtgagagaaactctgtcttctctctaagttttcttcctctttcactcatcgagga-gggtgattttaggtcaatttttgacctagaatcacccctctgc 14211118  T
Q  120 atctttctccccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    |||||| | ||| || |||| |||||||||||||||||| ||||| ||||||||||    
T  14211119 atcttt-ttccctttctttcaatctaaataagtgattttcacatacatcaagtttt 14211173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 226
Target Start/End: Complemental strand, 19103691 - 19103568
Alignment:
Q  104 agaatcacccatctgcatctttct-ccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtc 202  Q
    |||||||||| || |||||||| | |||| || ||||||||||||||||||||||| ||||| |||||||||| |||| |||||||||||||||||||||    
T  19103691 agaatcacccctcagcatcttttttcccctttctttcgatctaaataagtgattttcacatacatcaagtttttctttcatgttttttcgtgatttcgtc 19103592  T
Q  203 atctaagtgcgttgttgtgatgtt 226  Q
     ||| ||||||  |||||| ||||    
T  19103591 gtcttagtgcgacgttgtgttgtt 19103568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 13007015 - 13007223
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||| |||||||| ||||||||||||||  | || || || |||  ||||  ||||  |||||||||||||||||||||||| ||||||||||| ||| |    
T  13007015 agtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaatcacccctctac 13007114  T
Q  120 atctttctcccca--ttatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttg 216  Q
    | |||| | ||||  || |||| ||||||||||||| |||| |||| ||||||| |||| ||||| |||||||| ||||||||||| ||||||||||  |    
T  13007115 accttttttcccattttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttt-gtgatttcgtcgtctaagtgcggcg 13007213  T
Q  217 ttgtgatgtt 226  Q
    ||||| ||||    
T  13007214 ttgtgttgtt 13007223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 210
Target Start/End: Original strand, 38007196 - 38007336
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaag 171  Q
    |||| ||||||||||||||||||||||||| | ||||||||| ||| ||||||| ||||  || |||| || |||||||||| |||| ||| ||||||||    
T  38007196 aggaggggtggttttaggtcattttttgacctcgaatcacccctctacatctttttcccttttctttcaatttaaataagtggttttcacacatatcaag 38007295  T
Q  172 --ttttacttttatgttttttcgtgatttcgtcatctaagt 210  Q
      ||||  |||| |||||||| ||||||||||| |||||||    
T  38007296 ttttttgtttttttgtttttttgtgatttcgtcgtctaagt 38007336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 9114022 - 9113832
Alignment:
Q  25 gagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctt 124  Q
    ||||||||  |||||||||||||  | || || ||||||  ||||  |||| ||||| |||||||||||||||| || ||||||||||| ||| ||||||    
T  9114022 gagaaactctaacttctctctaaactttctttctctttcgttcatcgaggaggggtgattttaggtcattttttaacctagaatcacccctctacatctt 9113923  T
Q  125 tctcccca--ttatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    | | ||||  || |||  ||||||||||||| |||| |||| ||||||| |||| ||||| |||||||| ||||||||||| ||||||||||    
T  9113922 ttttcccattttcttttaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttt-gtgatttcgtcgtctaagtgcg 9113832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 28541208 - 28541007
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||    |||||||||||||| || |  ||||||||||||  |||  ||||| |||||||||| |||||||| ||||      | |||||    
T  28541208 agtgagagaaactctttcttctctctaagttttcttcctctttcactcatcgaggtggggtgattttaggtcaatttttgacctaga------cctctgc 28541115  T
Q  120 atctttct-ccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgtt 218  Q
    |||||| | |||| || |||| |||||||||||||||||| ||||| |||||||||| ||||  ||||||||||||||||| || ||| ||||||  |||    
T  28541114 atcttttttcccctttctttcaatctaaataagtgattttcacatacatcaagtttttctttcgtgttttttcgtgatttcatcgtcttagtgcgacgtt 28541015  T
Q  219 gtgatgtt 226  Q
    ||| ||||    
T  28541014 gtgttgtt 28541007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 226
Target Start/End: Complemental strand, 31392007 - 31391847
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatt---tcgatctaaataagtgatttttacatatatc 168  Q
    |||| ||||||||||||||||||||||||| ||||||||||| ||| ||||||| || ||  | ||   || ||||||||||||| |||| |||| ||||    
T  31392007 aggaggggtggttttaggtcattttttgacctagaatcacccctctacatctttttctccccttttcgatcaatctaaataagtggttttcacatttatc 31391908  T
Q  169 aagttttacttt---tatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    ||||||| | ||   ||| |||||| ||||||||||| ||||||||||  |||||| ||||    
T  31391907 aagtttttccttatgtatttttttttgtgatttcgtcgtctaagtgcgacgttgtgttgtt 31391847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 202
Target Start/End: Original strand, 34945262 - 34945391
Alignment:
Q  74 gaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttct--ccccattatttcgatctaaataagtgatttttacatatatcaag 171  Q
    ||||| |||||||||||||||||||||| ||||||||||| ||| ||||||| |  |||  || |||| ||||||||||||| |||| |||| |||||||    
T  34945262 gaaggatggttttaggtcattttttgacctagaatcacccttctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaag 34945361  T
Q  172 ttttacttttatgttttttcgtgatttcgtc 202  Q
    |||| | ||| ||| |||| |||||||||||    
T  34945362 tttttccttt-tgtgtttttgtgatttcgtc 34945391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 7036014 - 7036171
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||  |||||||||||||  | || || || |||| |||| ||||  ||||||||||||||||||||||||| || |||||| ||||| |    
T  7036014 agtgagagaaactcaaacttctctctaaactttctttctccttcattcatcaaggtggggtggttttaggtcattttttgacctaaaatcactcatctac 7036113  T
Q  120 atctttct--ccccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    |||||| |  | |  || |||| ||||||||||||| |||| ||||||||||| ||||    
T  7036114 atcttttttcctcttttctttcaatctaaataagtggttttcacatatatcaattttt 7036171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 24229969 - 24229891
Alignment:
Q  136 tttcgatctaaataagtgatttttacatatatcaagtt-ttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    |||| |||||||||||||||||| |||| ||||||||| || ||||| |||||||| ||||||||||||||||||||||    
T  24229969 tttcaatctaaataagtgattttcacatctatcaagttgtttcttttgtgtttttttgtgatttcgtcatctaagtgcg 24229891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 26878380 - 26878190
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||||||||||||||||||  | || || || |||| ||||  ||||  |||||||||| |||| |||||||  ||||||||||  ||| |    
T  26878380 agtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggagaggtggttttatgtca-tttttgatctagaatcacctctctac 26878282  T
Q  120 atctttctcccc--attatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtg 211  Q
    |||||| |||||   || |||| ||||||||||||| |||| ||||| ||||||||||  | || |||||||| ||||||||||| ||||||||    
T  26878281 atctttttcccccttttctttcaatctaaataagtggttttcacataaatcaagtttt-ttcttttgtttttt-gtgatttcgtcgtctaagtg 26878190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 8985239 - 8985062
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggtt-----ttaggtcattttttgacttagaatcaccca 114  Q
    ||||||||||||| ||||||||||||||||| || || |||||||||| || |||| ||||| ||     ||||||||||||||||  || ||||||||     
T  8985239 agtgagagaaactccaacttctctctaagttttcgttctctttcactcgtttaggaggggtgattttaggttaggtcattttttgatctaaaatcaccc- 8985141  T
Q  115 tctgcat-ctttctccccattatttcgatct-aaataagtgatttttacatatatcaagt-tttacttttatgtttttt 190  Q
    ||||||| |||| |||   || |||| |||| |||||||||||||  ||||||||||||| ||| ||||| ||||||||    
T  8985140 tctgcatcctttttccattttctttcaatctaaaataagtgatttccacatatatcaagtgttttcttttgtgtttttt 8985062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 226
Target Start/End: Complemental strand, 8096738 - 8096591
Alignment:
Q  80 tggttttaggtcattttttgacttagaatcacccatctgcatctttctccccatta-tttcgatctaaataagtgatttttacatatatcaag-ttttac 177  Q
    |||||||||||||||||| ||| ||||||||||| |||   ||||| | ||| ||  |||| ||||||||||||| |||| |||||||||||| |||| |    
T  8096738 tggttttaggtcattttt-gacctagaatcacccctctatttcttttttcccttttctttcaatctaaataagtggttttcacatatatcaagttttttc 8096640  T
Q  178 ttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    |||| |||||||  |||||||| || ||||||||||  |||||| ||||    
T  8096639 ttttgtgtttttgtgtgatttcatcgtctaagtgcggcgttgtgttgtt 8096591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 198
Target Start/End: Complemental strand, 10332799 - 10332673
Alignment:
Q  76 agggtggttttaggtcattttttgacttagaatcacccatctgcatc---tttctccccattatttcgatctaaataagtgatttttacatatatcaagt 172  Q
    |||||||||||| |||||||||||| |||||||||| | ||||||||   ||| |  |  || |||| |||||||||||||||||  | |||||||||||    
T  10332799 agggtggttttaagtcattttttgatttagaatcacacctctgcatcttttttttatcttttctttcaatctaaataagtgatttccatatatatcaagt 10332700  T
Q  173 -tttacttttatgttttttcgtgattt 198  Q
     ||| ||||| ||||||||||||||||    
T  10332699 gttttcttttgtgttttttcgtgattt 10332673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 213
Target Start/End: Original strand, 6216733 - 6216880
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatct-ttctccccatta-----tttcgatctaaataagtgatttttacatat 165  Q
    |||| |||||||||||||||||| |||||| || ||||| |||||| ||| | || ||||| ||      |||| ||||||||||||| |||| ||||||    
T  6216733 aggatgggtggttttaggtcattctttgacctaaaatcatccatctacatttgttttcccctttgctttctttcaatctaaataagtggttttcacatat 6216832  T
Q  166 atcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    |||||| |||| ||||| |||||||| ||||||||||| ||||| ||||    
T  6216833 atcaagtttttccttttgtgtttttt-gtgatttcgtcgtctaaatgcg 6216880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 170
Target Start/End: Complemental strand, 8088475 - 8088363
Alignment:
Q  58 tctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgattt 157  Q
    ||||||||||||| || | ||||| |||||| ||||| |||||| |  | |||||  ||||||||||| | | | || ||||||||||||||||||||||    
T  8088475 tctttcactcattgagaaggggtgattttagatcattctttgacctgaagtcacctctctgcatcttttttctctttctttcgatctaaataagtgattt 8088376  T
Q  158 ttacatatatcaa 170  Q
    | ||| |||||||    
T  8088375 tcacaaatatcaa 8088363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 26825267 - 26825424
Alignment:
Q  72 aggaagggtggttttaggtcatttttt--gacttagaatcacccatctgcatctttctccccattat--ttcgatctaaataagtgatttttacatatat 167  Q
    |||| ||||||||||||||| ||||||  ||| ||||||||||  ||| ||||||| | ||| || |  ||| ||||||||||||| |||| || | |||    
T  26825267 aggaggggtggttttaggtcttttttttggacctagaatcaccactctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctat 26825366  T
Q  168 caagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    |||||||| | ||| ||| |||| ||||||||||| ||||||||||  |||||| ||||    
T  26825367 caagtttttccttt-tgtgtttttgtgatttcgtcttctaagtgcggcgttgtgttgtt 26825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 226
Target Start/End: Complemental strand, 14726646 - 14726555
Alignment:
Q  136 tttcgatctaaataagtgatttttacatatatcaagtttta-cttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    |||| |||||| |||||| |||| | ||||||||||||||  ||| | |||||||| ||||||||||| |||||||||| ||||||| ||||    
T  14726646 tttcaatctaactaagtggttttcatatatatcaagttttttcttatgtgtttttttgtgatttcgtcgtctaagtgcggtgttgtgttgtt 14726555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 211
Target Start/End: Original strand, 15571332 - 15571465
Alignment:
Q  80 tggttttaggtcatttttt-gacttagaatcacccatctgcatctttctccccatta-tttcgatctaaataagtgatttttacatatatcaagttttac 177  Q
    |||||||| |||||||||| ||| |||||||| |||||  ||||||| | | ||||  |||| ||||||||||||| |||| |||||||||||||||| |    
T  15571332 tggttttatgtcatttttttgacctagaatcatccatcaacatcttttttctcatttctttcaatctaaataagtggttttcacatatatcaagtttttc 15571431  T
Q  178 ttttatgt-tttttcgtgatttcgtcatctaagtg 211  Q
     ||| |||  |||| ||||||||||| ||||||||    
T  15571432 cttt-tgtaatttttgtgatttcgtcgtctaagtg 15571465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 25979944 - 25980152
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||| |||||| ||||||||||||||  | || || || |||  ||||  |||| ||||||||| ||||||||||||||| | |||| |||| ||| |    
T  25979944 agtgagcgaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtggtttcaggtcattttttgacctggaattacccttctac 25980043  T
Q  120 atctttctccccatta--tttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttg 216  Q
    |||||| | ||| ||   |||| | ||||||||||| |||| |||| |||| || |||| ||||| || ||||| ||| ||||||| |||||||||| |     
T  25980044 atcttttttcccctttgttttcaacctaaataagtggttttaacatctatcgagtttttccttttgtggttttt-gtggtttcgtcgtctaagtgcggta 25980142  T
Q  217 ttgtgatgtt 226  Q
    ||||| ||||    
T  25980143 ttgtgttgtt 25980152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 11977121 - 11977044
Alignment:
Q  136 tttcgatctaaataagtgatttttacatatatcaag-ttttacttttatg-ttttttcgtgatttcgtcatctaagtg 211  Q
    |||| ||||||||||||| |||| |||||||||||| |||| ||||| || |||||| ||||||||||| ||||||||    
T  11977121 tttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgttttttttgtgatttcgtcgtctaagtg 11977044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 13421792 - 13421891
Alignment:
Q  83 ttttaggtcattttttgacttagaatcacccatctgcatctttctcccc--attatttcgatctaaataagtgatttttacatatatcaagttttacttt 180  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||| |||||   || |||  ||||||||||||| ||||  ||||||| ||||||| ||||    
T  13421792 ttttaggtcattttttgacatagaatcaccc-tctacatctttttcccccttttcttttaatctaaataagtggttttcccatatataaagtttttcttt 13421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 211
Target Start/End: Complemental strand, 14082614 - 14082482
Alignment:
Q  79 gtggttttaggtcattttttgacttagaatcaccca-tctgcatctttctc--cccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    ||||||||| ||||||||||||||| |||||||||  ||| ||| ||| |   ||  ||||||| |||||||||||||  ||| ||||||||||||||||    
T  14082614 gtggttttatgtcattttttgactttgaatcaccccctctacatattttttttccttttatttcaatctaaataagtggctttcacatatatcaagtttt 14082515  T
Q  176 acttttatgttttttcgtgatttcgtcatctaagtg 211  Q
     ||| ||   ||||| |||||||| || ||||||||    
T  14082514 tcttata---ttttttgtgatttcatcgtctaagtg 14082482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 168
Target Start/End: Complemental strand, 35631839 - 35631805
Alignment:
Q  134 tatttcgatctaaataagtgatttttacatatatc 168  Q
    |||||| ||||||||||||||||||||||||||||    
T  35631839 tatttcaatctaaataagtgatttttacatatatc 35631805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 11767683 - 11767763
Alignment:
Q  78 ggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgattttt 159  Q
    ||||||||||||||| |||||||| || ||||| |  ||| ||||||| || | || ||||| |||||||||||||||||||    
T  11767683 ggtggttttaggtcaatttttgacctaaaatcatctgtcttcatctttttctctat-atttcaatctaaataagtgattttt 11767763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 34881640 - 34881717
Alignment:
Q  134 tatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtg 211  Q
    |||||| |||||||||||||||||| ||||| ||| ||||||  | || | ||| || |||||||| |||||||||||    
T  34881640 tatttcaatctaaataagtgattttcacatagatctagtttttttcttttttttctttgtgatttcatcatctaagtg 34881717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 35850623 - 35850667
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatct 117  Q
    |||| ||||||||||||||| ||||||||| |||||||||||||||    
T  35850623 aggaggggtggttttaggtc-ttttttgacctagaatcacccatct 35850667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 230
Target Start/End: Original strand, 41630350 - 41630500
Alignment:
Q  78 ggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagttttac 177  Q
    ||||||||||||||| |||||||| ||||||||| | ||| ||||||| ||||  || |||| |||||||||||   |||| |||| ||| ||||||| |    
T  41630350 ggtggttttaggtca-tttttgacctagaatcactc-tctacatctttttcccatttctttcaatctaaataagccgttttcacatctataaagtttttc 41630447  T
Q  178 ttttatgt-tttttcgtgatttcgtcatctaagtgcgttgttgtgatgtttgtc 230  Q
    |||| |||  |||| |||||||||   |||||||||| |||| || ||||||||    
T  41630448 tttt-tgtagtttttgtgatttcgatgtctaagtgcggtgttttgttgtttgtc 41630500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 7930027 - 7930083
Alignment:
Q  66 tcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc 122  Q
    |||| ||||| ||||| |||||||||| |||||||| ||||||||||| | ||||||    
T  7930027 tcatcaaggaggggtgattttaggtcaatttttgacctagaatcacccctgtgcatc 7930083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 175
Target Start/End: Original strand, 10722617 - 10722717
Alignment:
Q  78 ggtggttttaggtcatttttt-gacttagaatcaccca-tctgcatctttctccc-cattatttcgatctaaataagtgatttttacatatatcaagttt 174  Q
    ||||||||||||||||||||| ||| |||||||||||  ||| ||||||| | || | || |||| ||||||||||||| |||| |||| || |||||||    
T  10722617 ggtggttttaggtcatttttttgacctagaatcaccccctctacatcttttttcctctttctttcaatctaaataagtgtttttcacatgtaacaagttt 10722716  T
Q  175 t 175  Q
    |    
T  10722717 t 10722717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 48
Target Start/End: Original strand, 41630297 - 41630325
Alignment:
Q  20 agtgagagaaacttcaacttctctctaag 48  Q
    |||||||||||||||||||||||||||||    
T  41630297 agtgagagaaacttcaacttctctctaag 41630325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 37 - 230
Target Start/End: Original strand, 7521 - 7715
Alignment:
Q  37 cttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattat 136  Q
    |||||||||||||| || || || || | ||||  |||| || |||||||||||||||||||||| ||||||||| |||||||||||||  |||| || |    
T  7521 cttctctctaagttttctttctcctttattcatcgaggagggatggttttaggtcattttttgacctagaatcactcatctgcatcttttacccctttct 7620  T
Q  137 ttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtttgtc 230  Q
    ||| || |||||||||| |||| |||||||||||| |||| ||||| |||||||| |||| || ||||||| ||||||  |||||| ||||||||    
T  7621 ttcaatttaaataagtggttttcacatatatcaagtttttccttttgtgtttttttgtgaatttgtcatctgagtgcggcgttgtgttgtttgtc 7715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 1239703 - 1239504
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||||||||||||||||||||| || || |||| | |||||  |||| ||||||||||||||| || |||||| || |||||||| |||||    
T  1239703 agtgagagaaacttcaacttctctctaagttttccttctcttccgctcatcgaggaggggtggttttaggtccttctttgacctaaaatcacccctctgc 1239604  T
Q  120 atc-tttctccccattatttcgatctaaataagtgatttttacatatatcaagt-tttacttttatg----ttttttcgtgatttcgtcatctaagtgcg 213  Q
    ||| ||| ||||| ||  |||||||||||||||||||||| ||| |||||| || ||| ||||| ||    |||||| ||||||||||| ||||||||||    
T  1239603 atcttttttcccctttcgttcgatctaaataagtgattttcacaaatatcaggtgttttcttttgtgtttttttttttgtgatttcgtcgtctaagtgcg 1239504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 15344095 - 15344289
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||||| |  || ||||||||||||  |||| |||||||||||||||||| |||||| || ||| |||| |||||    
T  15344095 agtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccctctgc 15344194  T
Q  120 atc-tttctccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgc 212  Q
    ||| ||| ||||| |||| | ||||||||||||||||||| ||| ||||||||  ||| ||||| || ||||| || |||| ||| |||||||||    
T  15344195 atcttttttcccctttatatggatctaaataagtgattttcacaaatatcaagcgttttcttttgtgattttttgtaattttgtcgtctaagtgc 15344289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 15433160 - 15433354
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||||| |  || ||||||||||||  |||| |||||||||||||||||| |||||| || ||| |||| |||||    
T  15433160 agtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccctctgc 15433259  T
Q  120 atc-tttctccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgc 212  Q
    ||| ||| ||||| |||| | ||||||||||||||||||| ||| ||||||||  ||| ||||| || ||||| || |||| ||| |||||||||    
T  15433260 atcttttttcccctttatatggatctaaataagtgattttcacaaatatcaagcgttttcttttgtgattttttgtaattttgtcgtctaagtgc 15433354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 15524464 - 15524658
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||||| |  || ||||||||||||  |||| |||||||||||||||||| |||||| || ||| |||| |||||    
T  15524464 agtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccctctgc 15524563  T
Q  120 atc-tttctccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgc 212  Q
    ||| ||| ||||| |||| | ||||||||||||||||||| ||| ||||||||  ||| ||||| || ||||| || |||| ||| |||||||||    
T  15524564 atcttttttcccctttatatggatctaaataagtgattttcacaaatatcaagcgttttcttttgtgattttttgtaattttgtcgtctaagtgc 15524658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 77 - 226
Target Start/End: Complemental strand, 18890948 - 18890798
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttct-ccccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    ||||| |||||||||| |||||||| ||||||||| ||||||||||||| | |||| || |||| |||||||||||||||||| ||||  ||||||||||    
T  18890948 gggtgattttaggtcaatttttgacctagaatcactcatctgcatcttttttcccctttctttcaatctaaataagtgattttcacatgcatcaagtttt 18890849  T
Q  176 acttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
     ||||| |||||||||||||||||||| ||| ||||||  |||||| ||||    
T  18890848 tcttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgtt 18890798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 212
Target Start/End: Original strand, 8826035 - 8826192
Alignment:
Q  58 tctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcaccca-tctgcatctttct--ccccattatttcgatctaaataagtga 154  Q
    ||||||||||||  |||| ||||||||||||||||||||||||  |||||||||||  | || |||||| |  |||| ||||||||||||||||||||||    
T  8826035 tctttcactcatcgaggatgggtggttttaggtcattttttgatctagaatcaccccctttgtatcttttttccccctttatttcgatctaaataagtga 8826134  T
Q  155 tttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgc 212  Q
    |||||||| |||||||| |||| ||||| | |||||||||||||||||| ||| |||||    
T  8826135 tttttacacatatcaagttttttcttttgt-ttttttcgtgatttcgtcgtctgagtgc 8826192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 190
Target Start/End: Complemental strand, 8443764 - 8443649
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttct---ccccattatttcgatctaaataagtgatttttacatatatcaagtt 173  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||   |||| || ||||||||||||||||||||||  ||||||||| || |    
T  8443764 gggtggttttaggtcattttttaacttagaatcacc-atctgcatctttcttttcccctttctttcgatctaaataagtgatttccacatatatccaggt 8443666  T
Q  174 ttacttttatgtttttt 190  Q
    || ||||| ||||||||    
T  8443665 tttcttttgtgtttttt 8443649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 1236993 - 1236888
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||||||||||||||||||||| || || |||||| |||||| |||| |||||||||||||||||| |||||| || ||| | || |||||    
T  1236993 agtgagagaaacttcaacttctctctaagttttccttctctttcgctcattgaggaggggtggttttaggtcattctttgacctaaaataatccctctgc 1236894  T
Q  120 atcttt 125  Q
    ||||||    
T  1236893 atcttt 1236888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 7883540 - 7883333
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||||||||||| ||||| || || || || |||  ||||  | || | ||||||||||||||||||| ||  || |||||||| ||| |    
T  7883540 agtgagagaaacttcaacttctttctaaattttctttctcattcgttcatcgatgatgagtggttttaggtcattttt-gatctataatcacccctctac 7883442  T
Q  120 atctttctcccca---ttatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttg 216  Q
    |||||| | |||    || |||| ||||||||||||| |||| |||| ||||||||||| ||||| |||||||| ||||||||||||||||||||||  |    
T  7883441 atcttttttccctcttttctttcaatctaaataagtggttttcacatctatcaagtttttcttttgtgtttttt-gtgatttcgtcatctaagtgcggcg 7883343  T
Q  217 ttgtgatgtt 226  Q
    ||||| ||||    
T  7883342 ttgtgttgtt 7883333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 8980986 - 8981125
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||||| || || || ||||||| |  |||| ||||||||||||||||||||||||| || |||||||| | |||    
T  8980986 agtgagagaaactccaacttctctctaagttttcgttctcattcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatcacccctatgc 8981085  T
Q  120 at-ctttctcccc-attatttcgatctaaataagtgattt 157  Q
    || |||| |||||  || |||| |||||||||||||||||    
T  8981086 atcctttttccccttttctttcaatctaaataagtgattt 8981125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 24099560 - 24099350
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||||||||||||||||| ||| || || ||||||| ||||  | | ||||||| ||||||||| |||||||| ||||||||||| |||||    
T  24099560 agtgagagaaacttcaacttctctctaggttttctttctctttcaatcatcga-gtagggtggctttaggtca-tttttgacctagaatcacccctctgc 24099463  T
Q  120 atctt-tctccccattatttcgatctaaataagtgatttttacatatatcaagt-tttacttttatgtttt----ttcgtgatttcgtcatctaagtgcg 213  Q
    || || | ||| | || ||||||| ||||||||||||||  ||||| ||||||| ||| ||||| ||||||    |||||||||||||| ||| ||||||    
T  24099462 attttgtttcctctttctttcgatttaaataagtgatttccacatagatcaagtgttttcttttttgttttattcttcgtgatttcgtcgtctgagtgcg 24099363  T
Q  214 ttgttgtgatgtt 226  Q
      |||||| ||||    
T  24099362 acgttgtgttgtt 24099350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 31013871 - 31013714
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||  | || || || |||  ||||  |||| ||||||||||||||||||||||||| ||||||||||| ||| |    
T  31013871 agtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctac 31013772  T
Q  120 atctttctcccc--attatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    |||||| |||||   || |||| ||||||||||||| |||| |||| |||| ||||||    
T  31013771 atctttttcccccttttctttcaatctaaataagtggttttcacatctatctagtttt 31013714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 199
Target Start/End: Original strand, 41896341 - 41896480
Alignment:
Q  58 tctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgattt 157  Q
    ||||||||||||  |||| | ||| |||||||||| |||||||| ||||||||||||| ||||| |||   ||| || |||| |||||||||||||||||    
T  41896341 tctttcactcatcgaggatgagtgattttaggtcaatttttgacctagaatcacccatttgcatttttt--ccctttctttcaatctaaataagtgattt 41896438  T
Q  158 ttacatatatcaagttttacttttatgttttttcgtgatttc 199  Q
    | ||||  |||||||||| ||||  |||||||||||||||||    
T  41896439 tcacatccatcaagtttttctttcgtgttttttcgtgatttc 41896480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 202
Target Start/End: Original strand, 3240216 - 3240350
Alignment:
Q  72 aggaagggtggttttaggtcattttttgact-tagaatcacccatctgcatctttctccccatta--tttcgatctaaataagtgatttttacatatatc 168  Q
    |||| ||||| ||||||||||||||||   | ||||||||||||||||||||||| |   ||||   |||| |||||||||||||||||  |||||||||    
T  3240216 aggaggggtgattttaggtcattttttttatctagaatcacccatctgcatcttttttttcatttcctttcaatctaaataagtgatttccacatatatc 3240315  T
Q  169 aagt-tttacttttatgttttttcgtgatttcgtc 202  Q
    |||| ||| ||||| ||||||||||||||||||||    
T  3240316 aagtgttttcttttgtgttttttcgtgatttcgtc 3240350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 27110764 - 27110575
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||  | || || || |||| ||||  | || ||||||||||||||||||||||||  || |||||| ||||| |    
T  27110764 agtgagagaaactccaacttctctctaaactttctttctccttcattcatcgaagatgggtggttttaggtcattttttgatctaaaatcacacatctac 27110665  T
Q  120 atctttct--ccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaa 208  Q
    |||||| |  | |  || |||| ||||||||||||| | || |||||||||||||||| | ||| ||| |||| || ||||||||||||||    
T  27110664 atcttttttactcttttctttcaatctaaataagtggtcttcacatatatcaagtttttccttt-tgtgtttttgtaatttcgtcatctaa 27110575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 212
Target Start/End: Complemental strand, 20559987 - 20559850
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaag-tttt 175  Q
    |||||||||||| |||||||| ||| ||||||||||| ||| ||| |||  |||  || |||| |||||||||||||||||| |||| ||||||| ||||    
T  20559987 gggtggttttagatcatttttggacctagaatcacccctctacattttttccccttttctttcaatctaaataagtgattttcacatctatcaagttttt 20559888  T
Q  176 acttttat-gttttttcgtgatttcgtcatctaagtgc 212  Q
     ||||| |  |||||| ||||||||||| |||||||||    
T  20559887 ccttttgtattttttttgtgatttcgtcgtctaagtgc 20559850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 212
Target Start/End: Complemental strand, 20571549 - 20571412
Alignment:
Q  77 gggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaag-tttt 175  Q
    |||||||||||| |||||||| ||| ||||||||||| ||| ||| |||  |||  || |||| |||||||||||||||||| |||| ||||||| ||||    
T  20571549 gggtggttttagatcatttttggacctagaatcacccctctacattttttccccttttctttcaatctaaataagtgattttcacatctatcaagttttt 20571450  T
Q  176 acttttat-gttttttcgtgatttcgtcatctaagtgc 212  Q
     ||||| |  |||||| ||||||||||| |||||||||    
T  20571449 ccttttgtattttttttgtgatttcgtcgtctaagtgc 20571412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 5046597 - 5046701
Alignment:
Q  78 ggtggttttaggtcattttttg-acttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagtttta 176  Q
    |||||||||||||||||||||  || ||||||| ||| | ||||||||| ||||| || |||  || ||||||||||||||| ||| |||||||||||||    
T  5046597 ggtggttttaggtcattttttttacctagaatcgcccctatgcatctttttcccctttcttttaatttaaataagtgattttcacacatatcaagtttta 5046696  T
Q  177 ctttt 181  Q
    |||||    
T  5046697 ctttt 5046701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 173
Target Start/End: Original strand, 37971086 - 37971236
Alignment:
Q  22 tgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcat 121  Q
    ||||||||||| |||||||||||||| || || || |  |||| ||||  ||||   ||||||||||||||||||||||| ||||||||||| ||| |||    
T  37971086 tgagagaaactccaacttctctctaaattttctttcttcttcattcatcgagga---gtggttttaggtcattttttgacctagaatcacccctctacat 37971182  T
Q  122 ctttct--ccccattatttcgatctaaataagtgatttttacatatatcaagtt 173  Q
    |||| |  |||  || |||| |||||||||||||||||| |||| || ||||||    
T  37971183 cttttttccccttttctttcaatctaaataagtgattttcacatctaccaagtt 37971236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 33214930 - 33214775
Alignment:
Q  21 gtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcatttttt-gacttagaatcacccatctgc 119  Q
    |||||| ||||||||| ||||||||||  | || || || |||  ||||  |||| ||||||||||||||| |||||| ||||||||||||  ||||| |    
T  33214930 gtgagacaaacttcaatttctctctaaactttctttctccttcgttcatcgaggatgggtggttttaggtcttttttttgacttagaatcattcatctac 33214831  T
Q  120 atctttctccccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    |||||| ||||  || |||| || |||||||||||||||  ||||||| |||||||    
T  33214830 atctttttcccttttctttcaatttaaataagtgattttcgcatatattaagtttt 33214775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 7677534 - 7677375
Alignment:
Q  66 tcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctc-cccattatttcgatctaaataagtgatttttacata 164  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||||| ||| |||||   || |   || ||||||||||||||| |  |||| |||||    
T  7677534 tcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatctcattcactttttctttcgatctaaataaattgttttcacata 7677435  T
Q  165 tatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    |||||||||||  |||| |||||||  |||||||| || ||||| ||||  |||||| ||||    
T  7677434 tatcaagttttgtttttgtgttttt--gtgatttcatcgtctaattgcggcgttgtgttgtt 7677375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 40619250 - 40619161
Alignment:
Q  141 atctaaataagtgatttttacatatatcaagttttacttttatgt-tttttcgtgatttcgtcatctaagtgcgttgttgtgatgtttgtc 230  Q
    |||||||||||||||||| |||||||||||||||| ||||| ||| ||||| |||||||| || ||||||||||  |||||| ||||||||    
T  40619250 atctaaataagtgattttcacatatatcaagtttttctttt-tgtgttttttgtgatttcatcgtctaagtgcggcgttgtgttgtttgtc 40619161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 5333346 - 5333423
Alignment:
Q  149 aagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgttgtgatgtt 226  Q
    ||||||||| |||||||||||||||||| |||| | |||||||  ||||||||||||| |||||| ||||||| ||||    
T  5333346 aagtgatttatacatatatcaagttttatttttgtattttttcaagatttcgtcatctgagtgcggtgttgtgttgtt 5333423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 26469430 - 26469340
Alignment:
Q  83 ttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    ||||||||||||||||||| |||||||| ||||||| || ||| |||   ||  ||| |||||||||||||||||| ||||||||||||||||    
T  26469430 ttttaggtcattttttgacctagaatcatccatctgaatttttttccttctt--ttcaatctaaataagtgattttcacatatatcaagtttt 26469340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 37663316 - 37663217
Alignment:
Q  79 gtggttttaggtcattttttgacttagaatcacccatctgcatctttctc---cccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    ||||||||| | ||||||||||| ||||||||| ||||| ||||||| |    | | |||||||||| |||||||||| |||||||||||||||||||||    
T  37663316 gtggttttatgccattttttgacatagaatcactcatctccatctttttttatctctttatttcgatgtaaataagtggtttttacatatatcaagtttt 37663217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 14585565 - 14585672
Alignment:
Q  97 ttgacttagaatcacccatctgcatctttct--ccccattatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtg 194  Q
    ||||| ||||||||||| ||||||||||| |  | |  || |||| |||||||||||||||||| ||||| |||||||||| ||||  ||||||||| ||    
T  14585565 ttgacctagaatcacccctctgcatctttttttctcttttctttcaatctaaataagtgattttcacatacatcaagtttttctttcgtgttttttcttg 14585664  T
Q  195 atttcgtc 202  Q
    ||||||||    
T  14585665 atttcgtc 14585672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 45446111 - 45445955
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||  | || || || |||  ||||  ||||||||| |||||| ||||||||||||| |||||||| |  ||| |    
T  45446111 agtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaagggtagttttatgtcattttttgacatagaatcatctctctac 45446012  T
Q  120 atc-tttctccccattatttcgatctaaataagtgatttttacatatatcaagtttt 175  Q
    ||| ||| ||||  ||||||| || ||| |||||| |||| ||| ||||||||||||    
T  45446011 atcttttttcccttttatttcaatttaattaagtggttttcacacatatcaagtttt 45445955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 220
Target Start/End: Complemental strand, 17693913 - 17693712
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||  | || || || |||  ||||| |||| |||| ||||||||||| |||||||| |||||||| || ||| |    
T  17693913 agtgagagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggttgttttaggtca-tttttgacctagaatcatccctctac 17693815  T
Q  120 atctttctcccca--ttatttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcgttgt 217  Q
    |||||| | | ||  || |||| |||||||||| || |||  ||| |||||||||||| | |||    ||||  ||||||||||| |||||||||| |||    
T  17693814 atcttttttctcaatttctttcaatctaaataaatgttttgaacaaatatcaagtttttccttttgcattttatgtgatttcgtcgtctaagtgcggtgt 17693715  T
Q  218 tgt 220  Q
    |||    
T  17693714 tgt 17693712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 14916384 - 14916332
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatcttt 125  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  14916384 aggaggggtggttttaggtcattttt-gacctagaatcacccatctgcatcttt 14916332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 25191366 - 25191261
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| ||||||||||||||  | || || || ||   ||||  ||||  |||| ||||||||||||||||||| ||||||||||||||| |    
T  25191366 agtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagaggtgattttaggtcattttttgacctagaatcacccatctac 25191267  T
Q  120 atcttt 125  Q
    ||||||    
T  25191266 atcttt 25191261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 29617757 - 29617656
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||| |||||||||||||||| || |  || ||||||||| ||  | ||   || |||||||||||||||||||| || ||||||||||||||    
T  29617757 agtgagagaaatttcaacttctctctaaattttgtttctctttcacttatcgaagagatgttgttttaggtcattttttgacctacaatcacccatctgc 29617658  T
Q  120 at 121  Q
    ||    
T  29617657 at 29617656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 153
Target Start/End: Original strand, 10377486 - 10377620
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||| |||||||| ||||||||||||||  | || || || |||  ||||  |||| ||||||||||||||||||||||||| ||||| |||| |||| |    
T  10377486 agtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaa-caccaatctac 10377584  T
Q  120 atctttctccccat--tatttcgatctaaataagtg 153  Q
    |||||| ||||| |  | |||| |||||||||||||    
T  10377585 atctttttcccccttctctttcaatctaaataagtg 10377620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 27498538 - 27498471
Alignment:
Q  144 taaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtg 211  Q
    |||||||||||||||||||||||||||| |||| ||||||||| |||| || |||||||| ||||||||    
T  27498538 taaataagtgatttttacatatatcaagtttttccttttatgtatttt-gtaatttcgtcgtctaagtg 27498471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 213
Target Start/End: Original strand, 23230436 - 23230627
Alignment:
Q  23 gagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc 122  Q
    |||||||||| ||||||||||||||  | || || || |||  ||||  |||| ||||| |||||||||| ||||||||  | |||||||| ||| ||||    
T  23230436 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtg-ttttaggtcaatttttgaccaaaaatcacccctctacatc 23230534  T
Q  123 tttctccccattatt---tcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    ||| | ||| || ||   || ||||||||||||| |||| | || ||||||| |||| ||||| |||||||  ||||||||||| ||||||||||    
T  23230535 ttttttcccctttttctttcaatctaaataagtggttttcatatctatcaagttttttcttttgtgttttt--gtgatttcgtcgtctaagtgcg 23230627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 213
Target Start/End: Complemental strand, 14545154 - 14545008
Alignment:
Q  69 ttaaggaagggtggttttaggtcattttttgacttagaatcaccc-atctgcatc--tttctccccattatttcgatctaaataagtgatttttacatat 165  Q
    ||||||| | ||||||||||||||||||||||| || ||||||||  ||| ||||  ||| || |  || |||| ||||||||||||| |||| ||||||    
T  14545154 ttaaggatgagtggttttaggtcattttttgacctaaaatcaccctctctacatctttttttctcttttctttcaatctaaataagtggttttcacatat 14545055  T
Q  166 atcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    |||||  ||| | ||| ||| |||| ||||||||||| ||||| ||||    
T  14545054 atcaaaattttccttt-tgtatttttgtgatttcgtcgtctaattgcg 14545008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 2655749 - 2655834
Alignment:
Q  78 ggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacata 164  Q
    ||||||||| ||||| || ||||| |  |||||||||||| ||||||| || |  ||||||| |||||||||||||||||| |||||    
T  2655749 ggtggttttgggtcaattcttgacctgcaatcacccatcttcatctttttctct-ttatttcaatctaaataagtgattttcacata 2655834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 39655300 - 39655377
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttt 97  Q
    |||||||||||||  | |||||||||||||| || || ||||||||| ||  ||||| |||| |||||||||| ||||    
T  39655300 agtgagagaaactctatcttctctctaagttttctttctctttcacttatcgaggaaaggtgattttaggtcaatttt 39655377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 164
Target Start/End: Original strand, 35580336 - 35580423
Alignment:
Q  76 agggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacata 164  Q
    ||||||||||| ||||| |||||||| || |||||| ||||| ||||||| | | |  |||||| || ||||||||||||||| |||||    
T  35580336 agggtggttttgggtcaatttttgacataaaatcactcatcttcatcttt-ttctctctatttcaatttaaataagtgattttcacata 35580423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 1131 - 1339
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||| ||||||||||||||||||||| || || || || |||  ||||  ||||  |||||||||||||||||||||||| ||||||||||| ||| |    
T  1131 agtgagtgaaacttcaacttctctctaaattttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaatcacccctctac 1230  T
Q  120 atc-tttctccccattatttcgatctaaataagtgatttttacatatatcaagtttt-acttttatgttttttcgtgatttcgtcatctaagtgcgttgt 217  Q
     || ||| ||||  || ||||  |||||||||||| |||| ||||||||||||||||  ||||| |||||||| |||||||| || ||||||||||  ||    
T  1231 ttcttttttcccttttctttcactctaaataagtggttttcacatatatcaagttttctcttttgtgtttttttgtgatttcttcgtctaagtgcggcgt 1330  T
Q  218 tgtgatgtt 226  Q
    |||| ||||    
T  1331 tgtgttgtt 1339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 72166 - 71958
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||| |||||||||||||||||||||||  | || || || |||  ||||  |||| ||||||||||||||||||||||||| ||||||||||  ||| |    
T  72166 agtgggagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccattcttc 72067  T
Q  120 atctttctcccc--attatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaagtgcgttg 216  Q
    |||||| |||||   || |||| ||| ||||||||| |||| |||| ||||||| |||| | ||| |||||||| ||||||||||| ||||||||||  |    
T  72066 atctttttcccccttttctttcaatccaaataagtggttttcacatctatcaagtttttccatttgtgtttttt-gtgatttcgtcgtctaagtgcggcg 71968  T
Q  217 ttgtgatgtt 226  Q
    ||||| ||||    
T  71967 ttgtgttgtt 71958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 213
Target Start/End: Complemental strand, 32991 - 32854
Alignment:
Q  79 gtggttttaggtcattttttgacttagaatcacccatctgcatctttc-tccccatta-tttcgatctaaataagtgatttttacatatatcaagtttta 176  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||||||  ||||| ||  |||| ||||||||||||| |||| |||| |||||||||||     
T  32991 gtggttttaggtcattttttgacatagaatcacccctctacatcttttgtccccttttctttcaatctaaataagtggttttcacatctatcaagttttt 32892  T
Q  177 c-ttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    | |||| |||||||| ||||||||||| ||||||||||    
T  32891 ccttttgtgtttttttgtgatttcgtcgtctaagtgcg 32854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 229
Target Start/End: Original strand, 50573 - 50784
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||| |||||||| |||||||| |||||  | || || || |||  ||||| |||| ||||| |||||||||| |||||||| |||||||| || ||| |    
T  50573 agtgggagaaactccaacttctttctaaactttctttctccttcgttcattgaggaggggtgattttaggtcactttttgacctagaatcatccctctac 50672  T
Q  120 atctttctccccattat--ttcgatctaaataagtgatttttacatatatcaagttttacttttatgt-tttttcgtgatttcgtcatctaagtgcgttg 216  Q
    |||||| | ||| || |  ||| ||||||||||||| |||| |||| ||||||||||| | ||| ||| ||||||||||||||||| ||||||||||  |    
T  50673 atcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttt-tgtgtttttcgtgatttcgtcgtctaagtgcggcg 50771  T
Q  217 ttgtgatgtttgt 229  Q
    ||||| |||||||    
T  50772 ttgtgttgtttgt 50784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 1976 - 1815
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    |||||||||||||    |||||||||| ||| || |  ||||||||| ||  |||| ||||| | |||||||| |||||||| ||||||||||  |||||    
T  1976 agtgagagaaactctgtcttctctctacgttttcttcctctttcacttatcgaggaggggtgatattaggtcaatttttgacctagaatcacctctctgc 1877  T
Q  120 atctttct-ccccattatttcgatctaaataagtgatttttacatatatcaagttttacttt 180  Q
    |||||| | |||| || |||| |||||||||||||||||| ||||| |||||||||| ||||    
T  1876 atcttttttcccctttctttcaatctaaataagtgattttcacatacatcaagtttttcttt 1815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 19337 - 19186
Alignment:
Q  20 agtgagagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgc 119  Q
    ||||||||||||| |||||||||||||| || || || ||||||||||||  |||| ||||||||||| |||  |||||||| |||||| |||| |||||    
T  19337 agtgagagaaactccaacttctctctaa-ttttctttctctttcactcatcgaggaggggtggttttatgtc-gtttttgacctagaattacccctctgc 19240  T
Q  120 atctttctccccattatttcgatctaaataagtgatttttacatatatcaagtttta 176  Q
    || ||  ||||  || ||||||||||||||||| ||||  ||| |||||||||||||    
T  19239 at-ttcatccc--ttttttcgatctaaataagttatttcaacacatatcaagtttta 19186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 213
Target Start/End: Original strand, 8353 - 8494
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatctttctccccattatttcgatctaaataagtgatttttacatatatcaag 171  Q
    |||| ||||||||||| || |||||||||| || |||||||| ||| || |||| |  |  || |||  | ||||||||||| |||||||||||||| ||    
T  8353 aggaggggtggttttaagttattttttgacctataatcacccctctacacctttttttcttttcttttaagctaaataagtggtttttacatatatccag 8452  T
Q  172 -ttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
     |||| ||||| || ||||| ||||||||||||||||||||||    
T  8453 tttttgcttttgtgattttt-gtgatttcgtcatctaagtgcg 8494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 10225 - 10149
Alignment:
Q  136 tttcgatctaaataagtgatttttacatatatcaagttttacttttatgttttttcgtgatttcgtcatctaagtgcg 213  Q
    |||| ||||||||||||| |||| |||||||||||||||| | ||| ||| |||| ||||||||||| ||||||||||    
T  10225 tttccatctaaataagtggttttcacatatatcaagtttttccttt-tgtgtttttgtgatttcgtcgtctaagtgcg 10149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 37925 - 38027
Alignment:
Q  111 cccatctgcatctttct-ccccattatttcgatctaaataagtgatttttacatatatcaag-ttttacttttatgttttttcgtgatttcgtcatctaa 208  Q
    ||||||| ||||||| | |||| || |||| ||||||||||||| |||| |||||| ||||| |||| ||||| ||||||||  | ||||||||||||||    
T  37925 cccatctacatcttttttcccctttctttcaatctaaataagtggttttcacatatgtcaagtttttccttttgtgtttttt--ttatttcgtcatctaa 38022  T
Q  209 gtgcg 213  Q
    |||||    
T  38023 gtgcg 38027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 92925 - 93043
Alignment:
Q  58 tctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatctgcatc-tttctccccattatttcgatctaaataagtgatt 156  Q
    ||||||| ||||  |||| |||||||||||||| |||||||||| |||||||| ||   |||||| ||| || || || |||| ||||||||||||||||    
T  92925 tctttcattcatataggaggggtggttttaggttattttttgacctagaatcatcctcgtgcatcttttttctcctttctttcaatctaaataagtgatt 93024  T
Q  157 tttacatatatcaagtttt 175  Q
    |   | |||||||||||||    
T  93025 tacgcttatatcaagtttt 93043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 112
Target Start/End: Original strand, 12761 - 12795
Alignment:
Q  78 ggtggttttaggtcattttttgacttagaatcacc 112  Q
    |||||||||||||||||||||||| ||||||||||    
T  12761 ggtggttttaggtcattttttgacctagaatcacc 12795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 25124 - 25215
Alignment:
Q  24 agagaaacttcaacttctctctaagttctcattatctttcactcattaaggaagggtggttttaggtcattttttgacttagaatcacccatct 117  Q
    |||||||||||||||| |||||||  | || || ||||||| ||||   ||| ||||||||||| |||| ||||||||||| |||||| |||||    
T  25124 agagaaacttcaacttttctctaaactttctttctctttcattcatc--ggaggggtggttttaagtcactttttgacttaaaatcactcatct 25215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 25579 - 25526
Alignment:
Q  72 aggaagggtggttttaggtcattttttgacttagaatcacccatctgcatcttt 125  Q
    |||| ||||||||||| ||||||||||||| || |||||||| ||| |||||||    
T  25579 aggaggggtggttttatgtcattttttgacctataatcacccctctacatcttt 25526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University