View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13033_high_2 (Length: 475)

Name: NF13033_high_2
Description: NF13033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13033_high_2
NF13033_high_2
[»] chr7 (55 HSPs)
chr7 (308-455)||(56330-56477)
chr7 (308-455)||(20478042-20478189)
chr7 (308-455)||(27666042-27666189)
chr7 (302-452)||(29996494-29996644)
chr7 (308-427)||(35401969-35402088)
chr7 (308-427)||(35403589-35403708)
chr7 (308-452)||(39859209-39859353)
chr7 (308-427)||(20479689-20479808)
chr7 (308-455)||(37115503-37115650)
chr7 (307-452)||(6602334-6602479)
chr7 (307-427)||(77984-78104)
chr7 (311-427)||(27664433-27664549)
chr7 (301-455)||(24228386-24228540)
chr7 (308-427)||(13169653-13169772)
chr7 (308-455)||(38474120-38474267)
chr7 (311-444)||(34776903-34777036)
chr7 (307-455)||(30940402-30940550)
chr7 (308-427)||(47384294-47384413)
chr7 (311-428)||(37796185-37796302)
chr7 (307-452)||(45359335-45359480)
chr7 (311-427)||(39857648-39857764)
chr7 (308-455)||(47386186-47386333)
chr7 (303-427)||(37113936-37114060)
chr7 (309-368)||(29994907-29994966)
chr7 (309-427)||(24226582-24226700)
chr7 (330-452)||(13168142-13168267)
chr7 (307-425)||(23904582-23904700)
chr7 (307-423)||(38549546-38549662)
chr7 (308-427)||(22155817-22155936)
chr7 (308-427)||(22211732-22211851)
chr7 (311-425)||(48227913-48228027)
chr7 (311-397)||(6605397-6605483)
chr7 (308-427)||(46437107-46437226)
chr7 (307-369)||(23906295-23906357)
chr7 (318-428)||(33038801-33038911)
chr7 (354-455)||(35693347-35693450)
chr7 (357-428)||(366747-366818)
chr7 (364-415)||(7401949-7402000)
chr7 (312-423)||(35691431-35691542)
chr7 (345-444)||(45463707-45463806)
chr7 (318-428)||(46996706-46996816)
chr7 (317-421)||(13039618-13039722)
chr7 (308-427)||(34774998-34775117)
chr7 (308-427)||(45361246-45361365)
chr7 (318-428)||(27955380-27955490)
chr7 (318-410)||(38613503-38613595)
chr7 (318-406)||(47341712-47341800)
chr7 (308-339)||(35693434-35693465)
chr7 (358-428)||(2167529-2167599)
chr7 (318-428)||(23953815-23953925)
chr7 (371-444)||(4322560-4322633)
chr7 (355-428)||(11682828-11682901)
chr7 (311-360)||(13018036-13018085)
chr7 (354-427)||(35344295-35344368)
chr7 (318-414)||(46812600-46812696)
[»] chr8 (58 HSPs)
chr8 (304-455)||(27691150-27691301)
chr8 (305-455)||(27406894-27407044)
chr8 (301-455)||(33708801-33708954)
chr8 (308-455)||(13282478-13282625)
chr8 (326-455)||(15305815-15305944)
chr8 (326-455)||(15486184-15486313)
chr8 (308-452)||(8609787-8609931)
chr8 (308-452)||(13108336-13108480)
chr8 (308-427)||(601674-601793)
chr8 (303-427)||(33762683-33762807)
chr8 (308-452)||(38547228-38547372)
chr8 (308-397)||(29237151-29237240)
chr8 (308-397)||(29239187-29239276)
chr8 (300-427)||(8608229-8608357)
chr8 (311-455)||(42941777-42941921)
chr8 (308-427)||(27692807-27692926)
chr8 (308-427)||(33761069-33761188)
chr8 (308-427)||(38548801-38548920)
chr8 (309-427)||(33707207-33707325)
chr8 (308-427)||(35509214-35509333)
chr8 (308-427)||(35510789-35510908)
chr8 (308-397)||(13106804-13106893)
chr8 (308-397)||(15308261-15308350)
chr8 (308-397)||(15488630-15488719)
chr8 (311-427)||(13283965-13284081)
chr8 (311-455)||(41825641-41825785)
chr8 (308-455)||(41042581-41042728)
chr8 (308-427)||(42943396-42943515)
chr8 (306-455)||(22272332-22272483)
chr8 (311-455)||(26242311-26242455)
chr8 (308-455)||(13486096-13486243)
chr8 (308-455)||(7745109-7745256)
chr8 (308-427)||(26238726-26238845)
chr8 (311-397)||(27404213-27404299)
chr8 (246-307)||(18645752-18645813)
chr8 (307-389)||(34681074-34681156)
chr8 (309-414)||(5036446-5036551)
chr8 (308-427)||(22273861-22273980)
chr8 (308-427)||(41823890-41824009)
chr8 (321-455)||(9673162-9673296)
chr8 (307-367)||(600759-600819)
chr8 (308-427)||(5038032-5038150)
chr8 (308-376)||(13484545-13484613)
chr8 (308-427)||(43262107-43262226)
chr8 (318-444)||(28433704-28433830)
chr8 (318-428)||(31821428-31821538)
chr8 (372-455)||(40339677-40339760)
chr8 (308-427)||(41040720-41040839)
chr8 (354-428)||(11788367-11788441)
chr8 (354-444)||(40020623-40020713)
chr8 (318-428)||(42897778-42897888)
chr8 (371-428)||(37526027-37526084)
chr8 (318-414)||(462388-462484)
chr8 (318-414)||(32822371-32822467)
chr8 (318-414)||(33160166-33160262)
chr8 (344-428)||(33750388-33750472)
chr8 (345-427)||(31201148-31201230)
chr8 (371-428)||(9184446-9184503)
[»] chr5 (39 HSPs)
chr5 (308-455)||(29621758-29621905)
chr5 (304-455)||(42473584-42473735)
chr5 (311-455)||(40780553-40780697)
chr5 (308-455)||(2854304-2854450)
chr5 (308-455)||(24541188-24541336)
chr5 (308-452)||(17574318-17574462)
chr5 (307-455)||(36057590-36057738)
chr5 (306-452)||(7267841-7267987)
chr5 (308-427)||(40782181-40782300)
chr5 (308-427)||(2852886-2853005)
chr5 (302-397)||(7269446-7269541)
chr5 (308-427)||(21842962-21843081)
chr5 (308-427)||(29620138-29620257)
chr5 (308-455)||(34327635-34327782)
chr5 (308-452)||(2179787-2179931)
chr5 (308-427)||(12738706-12738825)
chr5 (308-427)||(12801529-12801648)
chr5 (305-427)||(8541241-8541363)
chr5 (310-427)||(17577905-17578022)
chr5 (307-452)||(30468260-30468405)
chr5 (308-444)||(8539675-8539811)
chr5 (311-455)||(18624985-18625129)
chr5 (308-397)||(30463900-30463989)
chr5 (308-397)||(42471548-42471637)
chr5 (308-427)||(28813735-28813856)
chr5 (311-427)||(28822060-28822176)
chr5 (308-427)||(34328797-34328916)
chr5 (318-428)||(18728606-18728716)
chr5 (318-399)||(43492131-43492212)
chr5 (318-414)||(38596878-38596974)
chr5 (364-415)||(27075876-27075927)
chr5 (354-428)||(32087560-32087634)
chr5 (318-428)||(35395343-35395453)
chr5 (318-428)||(43318064-43318174)
chr5 (308-397)||(32134231-32134320)
chr5 (311-395)||(41493847-41493931)
chr5 (318-428)||(33256410-33256520)
chr5 (354-415)||(19997164-19997225)
chr5 (308-348)||(28819348-28819388)
[»] chr1 (50 HSPs)
chr1 (308-455)||(9121645-9121792)
chr1 (308-455)||(47013059-47013206)
chr1 (311-455)||(33602621-33602765)
chr1 (308-455)||(46583533-46583680)
chr1 (308-452)||(4855946-4856090)
chr1 (308-452)||(34778118-34778262)
chr1 (308-427)||(46582010-46582129)
chr1 (308-397)||(34776569-34776658)
chr1 (306-427)||(37345932-37346053)
chr1 (308-455)||(2869579-2869726)
chr1 (308-427)||(8167942-8168061)
chr1 (308-427)||(8169538-8169657)
chr1 (308-427)||(25276742-25276861)
chr1 (308-397)||(26223587-26223676)
chr1 (308-452)||(6818658-6818802)
chr1 (308-452)||(25278348-25278492)
chr1 (308-452)||(31238475-31238619)
chr1 (308-427)||(9120039-9120158)
chr1 (308-427)||(27089249-27089368)
chr1 (305-452)||(37344339-37344486)
chr1 (308-455)||(27087283-27087430)
chr1 (308-427)||(47011456-47011575)
chr1 (301-410)||(25278975-25279084)
chr1 (308-455)||(51896129-51896276)
chr1 (308-427)||(1444151-1444270)
chr1 (308-455)||(3013447-3013600)
chr1 (307-397)||(4854409-4854499)
chr1 (308-451)||(50556078-50556221)
chr1 (308-427)||(31236819-31236938)
chr1 (319-425)||(33599229-33599335)
chr1 (386-455)||(1442599-1442668)
chr1 (308-427)||(52641888-52642007)
chr1 (308-427)||(2871046-2871165)
chr1 (354-455)||(15104487-15104588)
chr1 (311-399)||(52643648-52643736)
chr1 (308-427)||(37088106-37088225)
chr1 (309-423)||(50554164-50554278)
chr1 (308-369)||(33599187-33599248)
chr1 (309-369)||(1442551-1442611)
chr1 (311-427)||(3011858-3011974)
chr1 (309-369)||(6816866-6816926)
chr1 (308-388)||(25278854-25278934)
chr1 (311-427)||(51894570-51894686)
chr1 (318-428)||(42134492-42134602)
chr1 (308-397)||(23577636-23577725)
chr1 (308-368)||(45044949-45045009)
chr1 (371-444)||(5783427-5783500)
chr1 (358-414)||(18183961-18184017)
chr1 (354-414)||(36895528-36895588)
chr1 (354-427)||(27940654-27940727)
[»] chr4 (50 HSPs)
chr4 (307-455)||(43519423-43519571)
chr4 (307-427)||(4173710-4173830)
chr4 (308-427)||(43507167-43507286)
chr4 (308-427)||(43508623-43508742)
chr4 (309-455)||(49523125-49523271)
chr4 (311-455)||(41761723-41761867)
chr4 (307-427)||(33265980-33266100)
chr4 (308-427)||(319273-319392)
chr4 (308-427)||(5437811-5437930)
chr4 (308-427)||(33264382-33264501)
chr4 (308-427)||(51013856-51013975)
chr4 (308-427)||(833223-833342)
chr4 (308-427)||(5439617-5439736)
chr4 (308-452)||(51011926-51012070)
chr4 (308-427)||(320870-320989)
chr4 (308-427)||(835012-835131)
chr4 (308-427)||(4169686-4169805)
chr4 (299-455)||(41781530-41781686)
chr4 (308-427)||(35401749-35401868)
chr4 (308-452)||(35404425-35404569)
chr4 (307-455)||(48813786-48813934)
chr4 (308-427)||(49524703-49524822)
chr4 (318-427)||(39345574-39345683)
chr4 (308-427)||(20493827-20493946)
chr4 (313-397)||(43521109-43521193)
chr4 (308-427)||(48645255-48645374)
chr4 (327-455)||(48646724-48646852)
chr4 (311-424)||(11601674-11601786)
chr4 (357-455)||(42980684-42980782)
chr4 (302-427)||(11254113-11254238)
chr4 (345-444)||(39083676-39083775)
chr4 (318-414)||(44558511-44558607)
chr4 (345-444)||(5484577-5484676)
chr4 (345-444)||(39921531-39921630)
chr4 (345-444)||(43779855-43779954)
chr4 (302-420)||(2691368-2691485)
chr4 (345-442)||(39189419-39189516)
chr4 (354-427)||(44794765-44794838)
chr4 (309-419)||(20819986-20820096)
chr4 (371-414)||(27624869-27624912)
chr4 (345-444)||(32652136-32652235)
chr4 (308-427)||(42982422-42982541)
chr4 (345-444)||(44994275-44994374)
chr4 (327-414)||(52868167-52868254)
chr4 (354-428)||(35996109-35996183)
chr4 (318-427)||(10372711-10372820)
chr4 (354-427)||(47941857-47941930)
chr4 (311-399)||(2693285-2693373)
chr4 (372-428)||(2827468-2827524)
chr4 (354-414)||(13450998-13451058)
[»] scaffold0058 (3 HSPs)
scaffold0058 (308-455)||(3294-3441)
scaffold0058 (308-455)||(4466-4613)
scaffold0058 (308-427)||(14313-14432)
[»] chr6 (34 HSPs)
chr6 (307-455)||(32455868-32456016)
chr6 (326-453)||(3456766-3456893)
chr6 (308-455)||(13613559-13613706)
chr6 (308-427)||(32518467-32518586)
chr6 (308-452)||(32439071-32439215)
chr6 (308-427)||(3480627-3480746)
chr6 (308-427)||(32454248-32454367)
chr6 (309-455)||(20523367-20523513)
chr6 (308-452)||(32516877-32517021)
chr6 (312-455)||(10568403-10568546)
chr6 (308-427)||(18645074-18645192)
chr6 (311-455)||(7372935-7373079)
chr6 (309-452)||(11355223-11355366)
chr6 (308-428)||(10569888-10570008)
chr6 (308-427)||(13610690-13610808)
chr6 (308-455)||(6899485-6899632)
chr6 (308-397)||(9400035-9400124)
chr6 (302-427)||(11357164-11357289)
chr6 (308-376)||(32437140-32437208)
chr6 (296-427)||(6902868-6902996)
chr6 (361-455)||(9398713-9398807)
chr6 (308-377)||(7371175-7371244)
chr6 (299-427)||(20525304-20525432)
chr6 (308-369)||(8605353-8605414)
chr6 (379-455)||(7049828-7049904)
chr6 (323-427)||(14338480-14338584)
chr6 (345-414)||(3018450-3018519)
chr6 (311-427)||(21068628-21068744)
chr6 (345-444)||(17952030-17952129)
chr6 (312-369)||(7049790-7049847)
chr6 (354-414)||(2968185-2968245)
chr6 (311-346)||(21091109-21091144)
chr6 (318-433)||(35175862-35175977)
chr6 (302-379)||(7051263-7051340)
[»] chr3 (64 HSPs)
chr3 (302-455)||(3152215-3152368)
chr3 (308-455)||(44794208-44794354)
chr3 (314-455)||(2660218-2660359)
chr3 (308-452)||(53190759-53190903)
chr3 (308-427)||(46308807-46308926)
chr3 (308-452)||(27899081-27899225)
chr3 (308-427)||(38193480-38193599)
chr3 (308-427)||(53094243-53094362)
chr3 (308-427)||(54900044-54900163)
chr3 (307-397)||(41979352-41979442)
chr3 (308-425)||(3150252-3150369)
chr3 (308-433)||(41977750-41977875)
chr3 (308-452)||(2226152-2226296)
chr3 (351-455)||(19987591-19987695)
chr3 (308-455)||(21348723-21348870)
chr3 (308-427)||(38191895-38192014)
chr3 (308-427)||(53187742-53187861)
chr3 (308-444)||(54898437-54898573)
chr3 (308-427)||(46310406-46310525)
chr3 (308-427)||(46611273-46611392)
chr3 (308-455)||(51684610-51684757)
chr3 (308-397)||(44795890-44795979)
chr3 (307-455)||(30599915-30600063)
chr3 (308-455)||(17515310-17515457)
chr3 (308-455)||(23293167-23293314)
chr3 (308-423)||(46609149-46609264)
chr3 (308-427)||(53092623-53092742)
chr3 (310-455)||(43765139-43765284)
chr3 (313-425)||(2661880-2661992)
chr3 (308-427)||(28626411-28626530)
chr3 (302-397)||(35903819-35903914)
chr3 (308-427)||(7883328-7883447)
chr3 (308-427)||(23291570-23291689)
chr3 (321-452)||(35905712-35905843)
chr3 (308-427)||(46112487-46112606)
chr3 (311-455)||(42279510-42279654)
chr3 (308-427)||(611192-611311)
chr3 (309-427)||(2378953-2379071)
chr3 (311-452)||(2377032-2377173)
chr3 (303-427)||(44267976-44268100)
chr3 (318-424)||(23774162-23774268)
chr3 (308-427)||(30598337-30598456)
chr3 (308-369)||(7884927-7884988)
chr3 (311-427)||(42282443-42282559)
chr3 (308-424)||(51686367-51686483)
chr3 (307-424)||(48829355-48829472)
chr3 (386-452)||(7884873-7884939)
chr3 (318-428)||(23888776-23888886)
chr3 (318-428)||(40508915-40509025)
chr3 (318-428)||(48633887-48633997)
chr3 (311-425)||(54412519-54412633)
chr3 (354-455)||(46197766-46197867)
chr3 (318-414)||(2977347-2977443)
chr3 (364-428)||(25535253-25535317)
chr3 (308-427)||(21350575-21350694)
chr3 (366-428)||(23876982-23877044)
chr3 (318-428)||(45898352-45898462)
chr3 (318-427)||(17516943-17517052)
chr3 (362-455)||(48830803-48830896)
chr3 (308-388)||(600725-600805)
chr3 (383-455)||(44276193-44276265)
chr3 (308-427)||(46114075-46114195)
chr3 (358-428)||(33113184-33113254)
chr3 (318-398)||(41944586-41944666)
[»] chr2 (39 HSPs)
chr2 (308-455)||(6785978-6786125)
chr2 (308-455)||(37020508-37020655)
chr2 (308-433)||(24208061-24208186)
chr2 (302-455)||(39664745-39664898)
chr2 (308-444)||(16763076-16763212)
chr2 (303-427)||(24205593-24205717)
chr2 (308-427)||(14387349-14387468)
chr2 (308-455)||(40560223-40560370)
chr2 (308-455)||(14389081-14389228)
chr2 (308-427)||(16764581-16764700)
chr2 (308-453)||(44709744-44709889)
chr2 (308-427)||(37022155-37022274)
chr2 (302-427)||(2577450-2577575)
chr2 (308-452)||(19908246-19908391)
chr2 (303-455)||(2766929-2767081)
chr2 (311-455)||(17696209-17696353)
chr2 (308-427)||(40561848-40561967)
chr2 (308-397)||(6783364-6783453)
chr2 (312-455)||(42519202-42519346)
chr2 (307-427)||(39663153-39663273)
chr2 (308-427)||(16376736-16376855)
chr2 (308-420)||(19581414-19581526)
chr2 (311-427)||(19906685-19906801)
chr2 (307-414)||(6797506-6797613)
chr2 (308-455)||(39455169-39455316)
chr2 (307-377)||(34400313-34400383)
chr2 (357-452)||(16377197-16377292)
chr2 (302-427)||(39456750-39456875)
chr2 (345-444)||(11023001-11023100)
chr2 (308-349)||(42517558-42517599)
chr2 (322-414)||(37417287-37417379)
chr2 (311-369)||(6799436-6799494)
chr2 (318-428)||(11315339-11315449)
chr2 (354-428)||(26584821-26584895)
chr2 (364-415)||(4046352-4046403)
chr2 (357-428)||(29909664-29909735)
chr2 (318-424)||(361455-361561)
chr2 (311-428)||(37645490-37645607)
chr2 (358-414)||(15432378-15432434)
[»] scaffold1712 (1 HSPs)
scaffold1712 (308-427)||(982-1101)
[»] scaffold0081 (1 HSPs)
scaffold0081 (308-427)||(54228-54347)
[»] scaffold1454 (1 HSPs)
scaffold1454 (311-452)||(1266-1407)
[»] scaffold0345 (1 HSPs)
scaffold0345 (302-427)||(1525-1650)
[»] scaffold0564 (1 HSPs)
scaffold0564 (310-399)||(8264-8353)
[»] scaffold0002 (1 HSPs)
scaffold0002 (315-379)||(436272-436336)


Alignment Details
Target: chr7 (Bit Score: 128; Significance: 6e-66; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 308 - 455
Target Start/End: Original strand, 56330 - 56477
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  56330 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 56429  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||| ||| |||||||||| |||||||| |||||||||||||||||    
T  56430 catcaattcactccctccgtccaaaatgtctgttagtagtgatgatgt 56477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 308 - 455
Target Start/End: Original strand, 20478042 - 20478189
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20478042 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtacctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 20478141  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  20478142 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 20478189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 27666189 - 27666042
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  27666189 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtc 27666090  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||| ||||||||||| |||| | |||||| ||||||||||||    
T  27666089 catcaaatccgtccctccgtccaaaaggcccgttaatagtgatgatgt 27666042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 302 - 452
Target Start/End: Complemental strand, 29996644 - 29996494
Alignment:
Q  302 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 401  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||| ||||||||||||||| |||||||||||||||    
T  29996644 aaaaacgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttaca 29996545  T
Q  402 gacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    ||||||||||||||  |||||||| || |||| |||||||| |||||||||    
T  29996544 gacgtccatcaaattcgtccctccatccaaaaggtccgttaatagtgatga 29996494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 35401969 - 35402088
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  35401969 gactaatatctcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35402068  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  35402069 aatcaaatcagtccctccgt 35402088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 35403708 - 35403589
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  35403708 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35403609  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  35403608 aatcaaatcagtccctccgt 35403589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 308 - 452
Target Start/End: Complemental strand, 39859353 - 39859209
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||| || || ||||||||||||| ||||||||| | ||||||| |||||||||||||||||    
T  39859353 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtc 39859254  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    | |||||   ||||||||||| ||||  ||||||||| |||||||    
T  39859253 cgtcaaaatggtccctccgtccaaaagctccgttagtggtgatga 39859209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 20479808 - 20479689
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  20479808 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 20479709  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  20479708 aatcaaattagtccctccgt 20479689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 37115650 - 37115503
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||| ||||||||| ||||||| |  || ||||| |||||||||| | ||||||| | ||||| |||||||||||||||||||    
T  37115650 gactaatacctcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgtc 37115551  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||  |||||||||||| ||||  ||||||||| ||||||||||    
T  37115550 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 37115503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 307 - 452
Target Start/End: Original strand, 6602334 - 6602479
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    ||||||||| |||||||||| ||||||||||| |||||||||| ||  |  |||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  6602334 ggactaataactcaaattcgaccttgaattttaaaaaatcggctaaacttatccctgaattttgcgaaatatctatttagtccctgaattttacagacgt 6602433  T
Q  407 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    ||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  6602434 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6602479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 307 - 427
Target Start/End: Complemental strand, 78104 - 77984
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| | |||||||||||| ||||||||||||   | | |     
T  78104 ggactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaatttacaaaatgc 78005  T
Q  407 ccatcaaatcagtccctccgt 427  Q
    | |||||||||||||||||||    
T  78004 caatcaaatcagtccctccgt 77984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 27664433 - 27664549
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    |||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| | |||||||||||||||||||||||||   | | ||| ||    
T  27664433 taatacctcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaat 27664532  T
Q  411 caaatcagtccctccgt 427  Q
    |||||||||||||||||    
T  27664533 caaatcagtccctccgt 27664549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 301 - 455
Target Start/End: Complemental strand, 24228540 - 24228386
Alignment:
Q  301 taaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac 400  Q
    |||||| || ||||||||||| ||||| |||||||||| |||||| ||| || |||||||||||||||| ||||||||| | |||||| |||||||||||    
T  24228540 taaaaatgattaatacctcaatttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttac 24228441  T
Q  401 agacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||||||||   |||||| |||| ||||  ||| ||||| ||||||||||    
T  24228440 agacgtccatcaaaatggtcccttcgtccaaaagctccattagtggtgatgatgt 24228386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 13169772 - 13169653
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||| || || ||||||||||||| ||||||||| | |||||||||||||||   | | |||    
T  13169772 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 13169673  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  13169672 aatcaaatcagtccctccgt 13169653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 38474267 - 38474120
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||| ||||| ||||||| |||||||||  || |||||||||||||||| ||||||||| | ||||||| ||||||||||||||| |    
T  38474267 gactaatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcc 38474168  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
     ||||||   |||| |||||| ||||  ||||||||| ||||||||||    
T  38474167 tatcaaaatggtccatccgtccaaaagctccgttagtggtgatgatgt 38474120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 444
Target Start/End: Complemental strand, 34777036 - 34776903
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    ||||||||||||||||| ||| |||||| |||||| ||| || ||| | |||||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  34777036 taatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 34776937  T
Q  411 caaatcagtccctccgtctaaaatgtccgttagt 444  Q
    ||||   ||||||||||| ||||  |||||||||    
T  34776936 caaaatggtccctccgtccaaaaactccgttagt 34776903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 307 - 455
Target Start/End: Complemental strand, 30940550 - 30940402
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    |||||||||||| ||||| || |||||||||| |||||||||| || |||||| || |||||| ||||||||| | ||||||||||||||||||| ||||    
T  30940550 ggactaataccttaaatttgttcttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattttacaaacgt 30940451  T
Q  407 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
     |||||||   ||| ||||||| ||||  ||||||||| ||||||||||    
T  30940450 tcatcaaaatggtctctccgtccaaaagctccgttagtggtgatgatgt 30940402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 47384294 - 47384413
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||||||||||  || || ||||||| |||||||| ||||||||| |||||||||| ||||||   | | |||    
T  47384294 gactaatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaatttacaaaatgtc 47384393  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  47384394 aatcaaatcagtccctccgt 47384413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 428
Target Start/End: Complemental strand, 37796302 - 37796185
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    |||||||||||||| ||||||||||||| ||||||| || || |||||||   |||||| ||||||||| | |||||||||||||||||| |||||||||    
T  37796302 taatacctcaaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtccctgaattttacggacgtccat 37796203  T
Q  411 caaatcagtccctccgtc 428  Q
    ||||  ||||||||||||    
T  37796202 caaaatagtccctccgtc 37796185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 307 - 452
Target Start/End: Original strand, 45359335 - 45359480
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    |||||||||||| ||||| |||| |||||||| |||||||||  || | ||||| |||||||| ||||||||| | ||||||| ||||||||||||||||    
T  45359335 ggactaataccttaaatttgtccatgaattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtccttgaattttacagacgt 45359434  T
Q  407 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    ||||||||   |||||||| || ||||  ||||||||| |||||||    
T  45359435 ccatcaaaatggtccctccatccaaaagctccgttagtggtgatga 45359480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 39857648 - 39857764
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    |||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||| ||||||   | | ||| ||    
T  39857648 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaatttacaaaatgtcaat 39857747  T
Q  411 caaatcagtccctccgt 427  Q
    |||||||||||||||||    
T  39857748 caaatcagtccctccgt 39857764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 47386333 - 47386186
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||| |||||| ||||||| |  || ||||||| |||||||| ||||||||  | |||||| || |||||||||||||||    
T  47386333 gactaatacctcaaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaatatttatttagtctctaaattttacagacgtc 47386234  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||   |||  |||||| ||||  ||||||||| ||||||||||    
T  47386233 catcaaaatggtcattccgtccaaaagctccgttagtggtgatgatgt 47386186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 303 - 427
Target Start/End: Original strand, 37113936 - 37114060
Alignment:
Q  303 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 402  Q
    |||| ||||||||||||||||||||||||||||||| |||||| ||  || ||| |||||||||||| ||||||||| | ||||||||| |||||   |     
T  37113936 aaaaagactaatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaatttacaaa 37114035  T
Q  403 acgtccatcaaatcagtccctccgt 427  Q
    | ||| |||||||||||||||||||    
T  37114036 atgtcaatcaaatcagtccctccgt 37114060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 309 - 368
Target Start/End: Original strand, 29994907 - 29994966
Alignment:
Q  309 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattt 368  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29994907 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattt 29994966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 309 - 427
Target Start/End: Original strand, 24226582 - 24226700
Alignment:
Q  309 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 408  Q
    |||||||||||||||||||||||||||||| |||||||||| || ||||||| |||||||| ||||||| | | || |||| |||||||   | | |||     
T  24226582 actaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattttgtccttgaatttacaaaatgtca 24226681  T
Q  409 atcaaatcagtccctccgt 427  Q
    |||||||||||||||||||    
T  24226682 atcaaatcagtccctccgt 24226700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 330 - 452
Target Start/End: Original strand, 13168142 - 13168267
Alignment:
Q  330 ttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccct---gaattttacagacgtccatcaaatcagtccctccg 426  Q
    ||||||||| |||||||||| || ||||||| |||||||| ||||||||| | |||||||||   |||||||||||||||||||||||   |||| ||||    
T  13168142 ttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctcctgaattttacagacgtccatcaaaatggtccatccg 13168241  T
Q  427 tctaaaatgtccgttagtagtgatga 452  Q
    || ||||  ||||||||| |||||||    
T  13168242 tccaaaagctccgttagtggtgatga 13168267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 307 - 425
Target Start/End: Original strand, 23904582 - 23904700
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    |||||||||||||||||||||||||||||||| |||||||||  || |||||| ||||||||| | ||||| | | ||||||| |||||||   | | ||    
T  23904582 ggactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtctctgaattttgcaaaatagctatttagtccatgaatttacaaaatgt 23904681  T
Q  407 ccatcaaatcagtccctcc 425  Q
    | |||||||||||||||||    
T  23904682 caatcaaatcagtccctcc 23904700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 307 - 423
Target Start/End: Original strand, 38549546 - 38549662
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    |||||||||||| ||||||||||||||||||| ||||||| || || ||||||||||||||||  |||||||| | ||| |||  ||||||   | | ||    
T  38549546 ggactaataccttaaattcgtccttgaattttcaaaaatcagccaagttcgtccctgaattttgtgaaatatctatttaatcctcgaatttacaaaatgt 38549645  T
Q  407 ccatcaaatcagtccct 423  Q
    |||||||||||||||||    
T  38549646 ccatcaaatcagtccct 38549662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 22155936 - 22155817
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||| || |||||||||||||||| |||||||||| || ||||||| |||||||| | ||||| | | || ||||||||||||   | | |||    
T  22155936 gactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtc 22155837  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  22155836 aatcaaatcagtccctccgt 22155817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 22211851 - 22211732
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||| || |||||||||||||||| |||||||||| || ||||||| |||||||| | ||||| | | || ||||||||||||   | | |||    
T  22211851 gactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtc 22211752  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  22211751 aatcaaatcagtccctccgt 22211732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 425
Target Start/End: Complemental strand, 48228027 - 48227913
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    |||||||||||||||||| ||||||||| |||||||||  || ||||||  |||||||| ||||||||| | || ||||||||||||   | | ||| ||    
T  48228027 taatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtctttgaattttgcgaaatatctattttgtccctgaatttacaaaatgtcaat 48227928  T
Q  411 caaatcagtccctcc 425  Q
    |||||||||||||||    
T  48227927 caaatcagtccctcc 48227913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 311 - 397
Target Start/End: Complemental strand, 6605483 - 6605397
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||| || |||||||||| ||||||| | | |||||||||||||||    
T  6605483 taatacctcaaatttgtccttgaattttaaaaaatcggtcaaattt-gttcctgaattttgcgaaatagctatttagtccctgaattt 6605397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 46437107 - 46437226
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| ||||||| || || ||||||  |||||||| ||||||| | | || |||| |||||||   | | |||    
T  46437107 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtcgttgaattttgcgaaatagctattttgtccttgaatttacaaaatgtc 46437206  T
Q  408 catcaaatcagtccctccgt 427  Q
     | |||||||||||||||||    
T  46437207 aaccaaatcagtccctccgt 46437226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 369
Target Start/End: Complemental strand, 23906357 - 23906295
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 369  Q
    ||||||||||||||||||| |||||||||||| |||||||||| || ||||||||| ||||||    
T  23906357 ggactaatacctcaaattcctccttgaattttaaaaaatcggccaaattcgtccctaaatttt 23906295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 428
Target Start/End: Complemental strand, 33038911 - 33038801
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    ||||||||||||||||||||| |    ||||  || ||| ||||| |||| | ||||||||||| |||||||||||||||| |||||||||||||||       
T  33038911 tcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaaag 33038812  T
Q  418 gtccctccgtc 428  Q
    |||||||||||    
T  33038811 gtccctccgtc 33038801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 354 - 455
Target Start/End: Complemental strand, 35693450 - 35693347
Alignment:
Q  354 ttcgtccctgaatttttcgaaatatca--aattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatg 451  Q
    ||||||| |||||||| || ||||||   ||||||||||||||||||||||||||||||||||   |||||||| || ||||  || |||||| ||||||    
T  35693450 ttcgtccttgaattttgcggaatatctctaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagttctgttagtggtgatg 35693351  T
Q  452 atgt 455  Q
    ||||    
T  35693350 atgt 35693347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 428
Target Start/End: Original strand, 366747 - 366818
Alignment:
Q  357 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 428  Q
    |||||| | ||||| |||||||||||||||||||||||||| ||||||||| |||||||   ||||||||||    
T  366747 gtccctcagttttttgaaatatcaaattagtccctgaatttaacagacgtctatcaaattcatccctccgtc 366818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 415
Target Start/End: Original strand, 7401949 - 7402000
Alignment:
Q  364 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 415  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  7401949 aatttatcgaaatatcaaattcgtccctgaatttaacagacgtccatcaaat 7402000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 423
Target Start/End: Original strand, 35691431 - 35691542
Alignment:
Q  312 aatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatc 411  Q
    ||||||||||||||||||||||||||| |||||||||  || |||||| || |||||| ||||||| | | || |||| |||||||   | | ||| |||    
T  35691431 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtctctaaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatc 35691530  T
Q  412 aaatcagtccct 423  Q
    ||||||||||||    
T  35691531 aaatcagtccct 35691542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 444
Target Start/End: Original strand, 45463707 - 45463806
Alignment:
Q  345 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 444  Q
    ||||| || ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  45463707 tcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 45463806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 428
Target Start/End: Complemental strand, 46996816 - 46996706
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    |||||||||||| |||||||| |    ||||| || ||||||||| |||| | ||||||||||| |||||| ||||||||  |||||||||||||||       
T  46996816 tcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtccatcaaaaag 46996717  T
Q  418 gtccctccgtc 428  Q
    |||||||||||    
T  46996716 gtccctccgtc 46996706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 421
Target Start/End: Complemental strand, 13039722 - 13039618
Alignment:
Q  317 ctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatc 416  Q
    ||||| |||||||||||||||| |||||||    || ||||||||| |||||| ||||||| | | ||||||||||||||||  | | ||| ||||||||    
T  13039722 ctcaagttcgtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaattttcaaaatgtcaatcaaatc 13039623  T
Q  417 agtcc 421  Q
    |||||    
T  13039622 agtcc 13039618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 34774998 - 34775117
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||| |||||||||||| ||||||||| |||||||||  || ||| | | |||||||| | ||||| | | |||||||||||||||   | |  ||    
T  34774998 gactaatatctcaaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaatttacaaaatatc 34775097  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  34775098 aatcaaatcagtccctccgt 34775117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 45361365 - 45361246
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||| |||||||||||| |||||| ||  ||||| || |||||||||| | |||||   | ||||||| |||| ||   | | |||    
T  45361365 gactaatacctcaaattcttccttgaattttaaaaaatgggtcaattttgttcctgaattttgcaaaatagttatttagtccttgaacttacaaaatgtc 45361266  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  45361265 aatcaaatcagtccctccgt 45361246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 428
Target Start/End: Original strand, 27955380 - 27955490
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    ||||||||||||||||||||| |   ||| || || ||| ||||| |||||| ||||||||||| ||| |  ||||||||  |||||||||||||||       
T  27955380 tcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgtcagacgtccatcaaagag 27955479  T
Q  418 gtccctccgtc 428  Q
    |||||||||||    
T  27955480 gtccctccgtc 27955490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 410
Target Start/End: Complemental strand, 38613595 - 38613503
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    |||||||||||||| |||||| |    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||    
T  38613595 tcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccat 38613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 406
Target Start/End: Complemental strand, 47341800 - 47341712
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    ||||||||||||||||||||| |    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||    
T  47341800 tcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 47341712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 339
Target Start/End: Complemental strand, 35693465 - 35693434
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttg 339  Q
    ||||||||||||||||||||||||||||||||    
T  35693465 gactaatacctcaaattcgtccttgaattttg 35693434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 428
Target Start/End: Original strand, 2167529 - 2167599
Alignment:
Q  358 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 428  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||| ||||||||   |||||||||||    
T  2167529 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgcccatcaaaaaggtccctccgtc 2167599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 428
Target Start/End: Original strand, 23953815 - 23953925
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    |||||||||||||| |||||| |    |||| ||| ||||||| | |||| | ||||||||||| ||||||| |||||||  |||||||| ||||||       
T  23953815 tcaaattcgtccttaaatttttacgggtcggtaaaattcgtccatcaattatgcgaaatatcaacttagtccgtgaatttgtcagacgtcaatcaaaaag 23953914  T
Q  418 gtccctccgtc 428  Q
    |||||||||||    
T  23953915 gtccctccgtc 23953925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 4322633 - 4322560
Alignment:
Q  371 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 444  Q
    |||||||||||| ||||||||||||||    ||| |||||||| |  ||||||||||| |||| ||||||||||    
T  4322633 cgaaatatcaaaatagtccctgaatttgtttgacatccatcaatttcgtccctccgtccaaaaggtccgttagt 4322560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 428
Target Start/End: Original strand, 11682828 - 11682901
Alignment:
Q  355 tcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 428  Q
    |||||||| |||| | | ||||||||||||||||| ||||||    ||||||||||||| | ||||||||||||    
T  11682828 tcgtccctcaattatgcaaaatatcaaattagtccttgaattcgttagacgtccatcaatttagtccctccgtc 11682901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 13018036 - 13018085
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtcc 360  Q
    ||||||||||||||| |||||||||||| ||||||| || || |||||||    
T  13018036 taatacctcaaattcatccttgaattttaaaaaatcagccaaattcgtcc 13018085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 427
Target Start/End: Complemental strand, 35344368 - 35344295
Alignment:
Q  354 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 427  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||   ||||||||||||||   ||||||||||    
T  35344368 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttataagacgtccatcaaaaaggtccctccgt 35344295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 414
Target Start/End: Complemental strand, 46812696 - 46812600
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 414  Q
    |||| |||||||||||||||| |  | ||||| || ||| ||||| ||||    |||||||||| ||||||||| |||||  |||||||||||||||    
T  46812696 tcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgtcagacgtccatcaaa 46812600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 304 - 455
Target Start/End: Original strand, 27691150 - 27691301
Alignment:
Q  304 aaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacaga 403  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27691150 aaaggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaga 27691249  T
Q  404 cgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||||||| ||||||||||| |||| |||||| | ||||||||||||    
T  27691250 cgtccatcaaatccgtccctccgtccaaaaggtccgtcaatagtgatgatgt 27691301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 305 - 455
Target Start/End: Complemental strand, 27407044 - 27406894
Alignment:
Q  305 aaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagac 404  Q
    |||||||||||||||||| | |||||||||||||||||||| ||| |||||||||| |||||| |||||||||| ||| |||||||||||||||||||||    
T  27407044 aaggactaatacctcaaaatagtccttgaattttgaaaaattggccaatttcgtccatgaattattcgaaatattaaaatagtccctgaattttacagac 27406945  T
Q  405 gtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||||||||||| ||||||| |||||||||||||  |||||||||||    
T  27406944 gtccatcaaatcagtctctccgtccaaaatgtccgttaacagtgatgatgt 27406894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 301 - 455
Target Start/End: Complemental strand, 33708954 - 33708801
Alignment:
Q  301 taaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac 400  Q
    |||| |||||||||||||||||||| |||||||||||| ||||| |||  ||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  33708954 taaataggactaatacctcaaattcatccttgaattttaaaaaa-cggtcaatttcgtccctgaattttgcgaaatattaaattagtccctgaattttac 33708856  T
Q  401 agacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    | |||||||||||||| ||||||||||| |||| |||||||| ||||||||||||    
T  33708855 aaacgtccatcaaatctgtccctccgtccaaaaggtccgttaatagtgatgatgt 33708801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 308 - 455
Target Start/End: Original strand, 13282478 - 13282625
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | ||||||||||||||||||| |||||    
T  13282478 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 13282577  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  13282578 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 13282625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 326 - 455
Target Start/End: Original strand, 15305815 - 15305944
Alignment:
Q  326 gtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 425  Q
    |||||||||||||||||||| ||  ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15305815 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15305914  T
Q  426 gtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||| ||||| |||||||  |||||||||||    
T  15305915 gtccaaaatatccgttaacagtgatgatgt 15305944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 326 - 455
Target Start/End: Original strand, 15486184 - 15486313
Alignment:
Q  326 gtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 425  Q
    |||||||||||||||||||| ||  ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15486184 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15486283  T
Q  426 gtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||| ||||| |||||||  |||||||||||    
T  15486284 gtccaaaatatccgttaacagtgatgatgt 15486313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 308 - 452
Target Start/End: Complemental strand, 8609931 - 8609787
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||| |||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  8609931 gactaatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 8609832  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  8609831 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 8609787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 308 - 452
Target Start/End: Complemental strand, 13108480 - 13108336
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||| |||||||||||||||||||||| |||||||||| || | |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13108480 gactaataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13108381  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    |||||||   ||||||||||| ||||  | ||||||| |||||||    
T  13108380 catcaaaatggtccctccgtccaaaagcttcgttagtggtgatga 13108336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 601793 - 601674
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  601793 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 601694  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  601693 aatcaaattagtccctccgt 601674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 303 - 427
Target Start/End: Complemental strand, 33762807 - 33762683
Alignment:
Q  303 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 402  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   |     
T  33762807 aaaatgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaa 33762708  T
Q  403 acgtccatcaaatcagtccctccgt 427  Q
    | ||| ||||||||| |||||||||    
T  33762707 atgtcaatcaaatcaatccctccgt 33762683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 308 - 452
Target Start/End: Original strand, 38547228 - 38547372
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||| |||||||||||||||| |||||||||| || | ||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  38547228 gactaatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 38547327  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    |||||||   |||||||| || ||||  ||||||||| |||||||    
T  38547328 catcaaaatggtccctccatccaaaagctccgttagtggtgatga 38547372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 29237151 - 29237240
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  29237151 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 29237240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 308 - 397
Target Start/End: Complemental strand, 29239276 - 29239187
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  29239276 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 300 - 427
Target Start/End: Original strand, 8608229 - 8608357
Alignment:
Q  300 ataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctg-aatttttcgaaatatcaaattagtccctgaatttt 398  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||| |||||| |||||||||||||||||||||||||||     
T  8608229 ataaaaaggactaataccttaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaattta 8608328  T
Q  399 acagacgtccatcaaatcagtccctccgt 427  Q
      | | ||| |||||||||||||||||||    
T  8608329 taaaatgtcaatcaaatcagtccctccgt 8608357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 311 - 455
Target Start/End: Original strand, 42941777 - 42941921
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    |||||||||||||||||||||||||||| ||||||| || || ||||||||||||||||  |||||||  | ||||||||||||||||||||| ||||||    
T  42941777 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccat 42941876  T
Q  411 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||  |||||||||||| ||||| ||||||||| | ||||||||    
T  42941877 caaaatagtccctccgtccaaaatctccgttagtggagatgatgt 42941921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 27692926 - 27692807
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||   | | |||    
T  27692926 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtc 27692827  T
Q  408 catcaaatcagtccctccgt 427  Q
     || ||||||||||||||||    
T  27692826 aattaaatcagtccctccgt 27692807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 33761069 - 33761188
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  33761069 gactaatacctcaaattcgtctttgaattttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 33761168  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  33761169 aatcaaatcagtccctccgt 33761188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 38548920 - 38548801
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||   | |  ||    
T  38548920 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttacaaaatttc 38548821  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  38548820 aatcaaatcagtccctccgt 38548801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 309 - 427
Target Start/End: Original strand, 33707207 - 33707325
Alignment:
Q  309 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 408  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||     
T  33707207 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttataaaatgtca 33707306  T
Q  409 atcaaatcagtccctccgt 427  Q
    |||||||||||| ||||||    
T  33707307 atcaaatcagtcactccgt 33707325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 35509214 - 35509333
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  35509214 gactaatacctcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35509313  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||||||||| |||||    
T  35509314 aatcaaatcagtccatccgt 35509333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 35510908 - 35510789
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||  ||||||||||||||||||||||||||   | | |||    
T  35510908 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtc 35510809  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  35510808 aatcaaatcagtccctccgt 35510789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 13106804 - 13106893
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||    
T  13106804 gactaataccttaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 13106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 308 - 397
Target Start/End: Complemental strand, 15308350 - 15308261
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  15308350 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 308 - 397
Target Start/End: Complemental strand, 15488719 - 15488630
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  15488719 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 311 - 427
Target Start/End: Complemental strand, 13284081 - 13283965
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||| |||||||   | | ||| ||    
T  13284081 taataccacaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaat 13283982  T
Q  411 caaatcagtccctccgt 427  Q
    |||||||||||||||||    
T  13283981 caaatcagtccctccgt 13283965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 311 - 455
Target Start/End: Complemental strand, 41825785 - 41825641
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    |||||||||||||||||||||||||||| |||||||    || ||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  41825785 taatacctcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41825686  T
Q  411 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||   ||| ||||||| ||||  || |||||||||||||||||    
T  41825685 caaaatggtcactccgtccaaaagctctgttagtagtgatgatgt 41825641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 41042728 - 41042581
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||| |||| |||||||||||||| |||||| ||| || || |||||||||||||  |||||||| | |||||||||||||||||||| ||||    
T  41042728 gactaataccttaaatccgtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtc 41042629  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  41042628 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 41042581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 42943515 - 42943396
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||   | | |||    
T  42943515 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 42943416  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  42943415 aatcaaatcagtccctccgt 42943396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 306 - 455
Target Start/End: Original strand, 22272332 - 22272483
Alignment:
Q  306 aggactaatacctcaaattcgtccttgaattttgaaaaa--tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacaga 403  Q
    ||||||||||||||||||||||| ||||||||| |||||  || |  || |||||||||||||||| || |||||| | ||||||||||||||||||| |    
T  22272332 aggactaatacctcaaattcgtctttgaattttaaaaaaaatcagtcaaattcgtccctgaattttgcgtaatatctatttagtccctgaattttacaaa 22272431  T
Q  404 cgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||||||  ||||||||| || ||||  ||||||||| ||||||||||    
T  22272432 cgtccatcaaaatagtccctccatccaaaagctccgttagtggtgatgatgt 22272483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 311 - 455
Target Start/End: Complemental strand, 26242455 - 26242311
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    ||||||||||| ||||| |||||||||| ||||||| || || ||||||||| |||||| ||||||||| | |||||| |||||||||||||||||||||    
T  26242455 taatacctcaatttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacgtccat 26242356  T
Q  411 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||   ||||||||||| ||||  ||||||||| | ||||||||    
T  26242355 caaaatggtccctccgtccaaaagctccgttagtggcgatgatgt 26242311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 13486243 - 13486096
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||| || |||||||||| |||||||||  |  |||||| ||| ||||| ||||||||| | |||||||||||||||||||||||||    
T  13486243 gactaatacctcaaatttgtgcttgaatttttaaaaatcggtcagattcgtctctggattttgcgaaatatctatttagtccctgaattttacagacgtc 13486144  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||   ||||||| ||| ||||  ||| ||||||||||||||||    
T  13486143 catcaaaatggtccctctgtccaaaagctccattagtagtgatgatgt 13486096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 7745256 - 7745109
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||| |||||||||||| ||||||||| ||||||| || || |||||| ||||||||| ||||||||  | |||||||||| ||||||||||| ||    
T  7745256 gactaatatctcaaattcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtccctgtattttacagacatc 7745157  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||   |||||||| || ||||  ||||||||| ||||||||||    
T  7745156 catcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 7745109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 26238726 - 26238845
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||| ||||||||| | |||||||  ||||||   | | |||    
T  26238726 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtc 26238825  T
Q  408 catcaaatcagtccctccgt 427  Q
    ||||||||||||||||||||    
T  26238826 catcaaatcagtccctccgt 26238845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 311 - 397
Target Start/End: Original strand, 27404213 - 27404299
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    |||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| |||||    
T  27404213 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctaaattt 27404299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 18645752 - 18645813
Alignment:
Q  246 agttcggttgatgatctaagcgatactaaaggagtttaaagcacatttgctattataaaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18645752 agttcggttgatgatctaagcgatactaaaggagtttaaagcacatttgctattataaaaag 18645813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 34681156 - 34681074
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtcc 389  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||    
T  34681156 ggactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtcc 34681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 414
Target Start/End: Original strand, 5036446 - 5036551
Alignment:
Q  309 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 408  Q
    ||||||||||||||||||||||| |||||| ||||||| |  || ||||||||||||||||  |||||||| | ||||||| |||||||||||||||||     
T  5036446 actaatacctcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtct 5036545  T
Q  409 atcaaa 414  Q
    ||||||    
T  5036546 atcaaa 5036551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 22273980 - 22273861
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||| ||||||||||||| |||||||||| || || ||| ||||||||| | ||||||| | |||||||||||||||   | | |||    
T  22273980 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaatttacaaaatgtc 22273881  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  22273880 aatcaaatcagtccctccgt 22273861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 41823890 - 41824009
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||| ||||||||||||||||||| ||||||| || |||||||||| |||||||| ||||||||| | |||||||  ||||||   | | ||     
T  41823890 gactaataccttaaattcgtccttgaattttcaaaaatcagctaatttcgtccttgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtt 41823989  T
Q  408 catcaaatcagtccctccgt 427  Q
    ||||||||||||||||||||    
T  41823990 catcaaatcagtccctccgt 41824009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 455
Target Start/End: Complemental strand, 9673296 - 9673162
Alignment:
Q  321 aattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtc 420  Q
    ||||||||||||||| || |  |||  || || ||||||||||||||||  |||||||| | ||| ||||||||||||||||||||||||||||   |||    
T  9673296 aattcgtccttgaatcttcatcaattagctaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtc 9673197  T
Q  421 cctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||||||||  | ||||||| ||||||||||    
T  9673196 cctccgtctaaaagcttcgttagtggtgatgatgt 9673162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 307 - 367
Target Start/End: Original strand, 600759 - 600819
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatt 367  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||    
T  600759 ggactaatacctcaaattcgtccttgaattttgaaaaatcagccaatttcgtccttgaatt 600819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 5038150 - 5038032
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||| ||||||||| |||||||||  || ||||| | |||||||| ||||||| | | |||||||||||||||   | | |||    
T  5038150 gactaatacctcaaattcgtc-ttgaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaatttacaaaatgtc 5038052  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  5038051 aatcaaatcagtccctccgt 5038032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 13484545 - 13484613
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaat 376  Q
    ||||||| ||||||||||||| ||||||||| |||||||||| || |||||||||||||||| ||||||    
T  13484545 gactaatgcctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaat 13484613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 43262226 - 43262107
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||| |||||| ||||||| || || |||| |||| |||||| ||||||||| | |||||||  ||||||   | | |||    
T  43262226 gactaatacctcaaattcgtccttaaattttcaaaaatcagctaaattcgaccctaaattttgcgaaatatctatttagtcctcgaatttacaaaatgtc 43262127  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||| ||||||    
T  43262126 aatcaaatcagtctctccgt 43262107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 444
Target Start/End: Complemental strand, 28433830 - 28433704
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    |||| ||||||| |||||||| ||  |||||| || ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||| | |      
T  28433830 tcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcgatttc 28433731  T
Q  418 gtccctccgtctaaaatgtccgttagt 444  Q
    ||||||||||| |||| || |||||||    
T  28433730 gtccctccgtccaaaaggttcgttagt 28433704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 428
Target Start/End: Original strand, 31821428 - 31821538
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    |||||||||||| |||||||| | |  ||||  || ||||||||| |||| | ||||||||||| |||||||| ||||||  |||||||||||||||       
T  31821428 tcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgtccatcaaaaag 31821527  T
Q  418 gtccctccgtc 428  Q
    |||||||||||    
T  31821528 gtccctccgtc 31821538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 455
Target Start/End: Complemental strand, 40339760 - 40339677
Alignment:
Q  372 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||| | ||||||| ||||||||||||| ||||||||||   |||||| | || ||||  ||||||||||||||||||||    
T  40339760 gaaatatctatttagtccatgaattttacagatgtccatcaaaatggtcccttcatccaaaagctccgttagtagtgatgatgt 40339677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 41040720 - 41040839
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||| ||| ||||||||| |||||||||| || |||||  ||||||||| | ||||| | | || |||| |||||||   | | |||    
T  41040720 gactaatacctcaaatttgtctttgaatttttaaaaatcggctaaattcgtttctgaattttccaaaatagctattttgtccttgaatttacaaaatgtc 41040819  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||| ||||||||||    
T  41040820 aatcaaatcggtccctccgt 41040839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 428
Target Start/End: Original strand, 11788367 - 11788441
Alignment:
Q  354 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 428  Q
    ||||||||  ||||| ||||||||||||||| ||||  |||||| |||||||||||||||||   ||||||||||    
T  11788367 ttcgtcccctaatttatcgaaatatcaaatttgtcctcgaatttaacagacgtccatcaaattcatccctccgtc 11788441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 40020713 - 40020623
Alignment:
Q  354 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 444  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  40020713 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 40020623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 428
Target Start/End: Complemental strand, 42897888 - 42897778
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    |||||| |||||||||||||| |    ||||| || ||||||||| |||| |  |||||||||| ||||||| |||||||  |||||||||||||||       
T  42897888 tcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaag 42897789  T
Q  418 gtccctccgtc 428  Q
    |||||||||||    
T  42897788 gtccctccgtc 42897778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 37526084 - 37526027
Alignment:
Q  371 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 428  Q
    ||||||||||| |||||||||||||||| ||||| |||||||||   |||||||||||    
T  37526084 cgaaatatcaacttagtccctgaatttttcagacatccatcaaaaaggtccctccgtc 37526027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 414
Target Start/End: Complemental strand, 462484 - 462388
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 414  Q
    ||||||||||| ||||||||| | | |||||| || ||| ||| | |||| | ||||||||||| ||||||| |||||||  || ||||||||||||    
T  462484 tcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgtcaaacgtccatcaaa 462388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 414
Target Start/End: Original strand, 32822371 - 32822467
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 414  Q
    |||| |||||||||||||||| |   |||||| || ||| ||||| |||| ||  ||||||||| |||||||||||||||  |||| ||||||||||    
T  32822371 tcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgtcagatgtccatcaaa 32822467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 414
Target Start/End: Complemental strand, 33160262 - 33160166
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 414  Q
    ||||||||||||||||||||| | |  ||||| || ||| ||||| |||| |  |||||||||| |||||| ||||||||  |||||| ||||||||    
T  33160262 tcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgtcagacgcccatcaaa 33160166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 428
Target Start/End: Complemental strand, 33750472 - 33750388
Alignment:
Q  344 atcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 428  Q
    |||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  ||||| | |||||||   |||||||||||    
T  33750472 atcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtc 33750388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 31201230 - 31201148
Alignment:
Q  345 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 427  Q
    ||||| || ||||||| | |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  31201230 tcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 31201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 9184446 - 9184503
Alignment:
Q  371 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 428  Q
    |||||||||||||||||||||||||||  |||||||| ||| ||   |||||||||||    
T  9184446 cgaaatatcaaattagtccctgaatttgtcagacgtcgatcgaaatggtccctccgtc 9184503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 3e-61; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 29621905 - 29621758
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29621905 gactaatacctcaaaatagtcattgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 29621806  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  29621805 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 29621758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 304 - 455
Target Start/End: Complemental strand, 42473735 - 42473584
Alignment:
Q  304 aaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacaga 403  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  42473735 aaaggactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattttacaga 42473636  T
Q  404 cgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||||||||||||| |||||| |||||||||||||  |||||||||||    
T  42473635 cgtccatcaaatcagtccttccgtccaaaatgtccgttaacagtgatgatgt 42473584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 311 - 455
Target Start/End: Original strand, 40780553 - 40780697
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    |||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  40780553 taatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccat 40780652  T
Q  411 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||||||||||||| |||||||||||||  |||||||||||    
T  40780653 caaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 40780697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 2854450 - 2854304
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2854450 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattttacagacgtc 2854352  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    || |||||  ||||||||||| |||| |||| ||| ||||||||||||    
T  2854351 caacaaattcgtccctccgtccaaaaggtccattaatagtgatgatgt 2854304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 24541336 - 24541188
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24541336 gactaatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 24541237  T
Q  408 catcaaa-tcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||| |||   |||||||| |||| |||  ||| ||||||||||||    
T  24541236 catcaaattcatctcctccgtccaaaaggtctattaatagtgatgatgt 24541188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 308 - 452
Target Start/End: Original strand, 17574318 - 17574462
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  17574318 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 17574417  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  17574418 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 17574462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 307 - 455
Target Start/End: Complemental strand, 36057738 - 36057590
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||| |||||||||||||||||||    
T  36057738 ggactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgt 36057639  T
Q  407 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||   ||||||||||| ||||  ||||||| | ||||||||||    
T  36057638 ccatcaaaatggtccctccgtccaaaagctccgttaatggtgatgatgt 36057590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 306 - 452
Target Start/End: Original strand, 7267841 - 7267987
Alignment:
Q  306 aggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacg 405  Q
    ||||||||||||||||||||||||||||||||| |||||||| | || |||||| ||||||||| ||||||||| | |||||||||||||||||||||||    
T  7267841 aggactaatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacg 7267940  T
Q  406 tccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    |||||||||    |||||||||| ||||  ||||||||| |||||||    
T  7267941 tccatcaaaatgatccctccgtccaaaagctccgttagtggtgatga 7267987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 40782300 - 40782181
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  40782300 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 40782201  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  40782200 aatcaaattagtccctccgt 40782181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 2852886 - 2853005
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||||   | | |||    
T  2852886 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtc 2852985  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  2852986 aatcaaatcagtccctccgt 2853005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 302 - 397
Target Start/End: Complemental strand, 7269541 - 7269446
Alignment:
Q  302 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  7269541 aaaaatgactaatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 21843081 - 21842962
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| |||| |||||||| |||||||||||||||||||||||||||   | | |||    
T  21843081 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 21842982  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  21842981 aatcaaatcagtccctccgt 21842962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 29620138 - 29620257
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||   | | |||    
T  29620138 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaatttacaaaatgtc 29620237  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  29620238 aatcaaattagtccctccgt 29620257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 455
Target Start/End: Original strand, 34327635 - 34327782
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||  ||||| ||| || |||||| ||||||||| ||||||||| | |||||||||||||||||||||||||    
T  34327635 gactaatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 34327734  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||   ||| ||||||| ||||  || |||||| ||||||||||    
T  34327735 catcaaaatggtctctccgtccaaaagctctgttagtggtgatgatgt 34327782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 308 - 452
Target Start/End: Original strand, 2179787 - 2179931
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||| ||||||||||||| |||||||||  || ||||||||||||||||  |||||||| | ||| |||||||||||||||||| ||    
T  2179787 gactaatacctcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatc 2179886  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    |||||||   ||||||||||| ||||  ||| ||||| |||||||    
T  2179887 catcaaaatggtccctccgtccaaaagctccattagtggtgatga 2179931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 12738825 - 12738706
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||| |||||||||| ||||||||| | |||||||||||||||   | | |||    
T  12738825 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 12738726  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  12738725 aatcaaatcagtccctccgt 12738706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 12801648 - 12801529
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||| |||||||||| ||||||||| | |||||||||||||||   | | |||    
T  12801648 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 12801549  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  12801548 aatcaaatcagtccctccgt 12801529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 305 - 427
Target Start/End: Complemental strand, 8541363 - 8541241
Alignment:
Q  305 aaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagac 404  Q
    |||||||||||||||||||||||| ||||||||| |||||||||| || |||||||||||||||| ||||||||| | ||||||| |||||||   | |     
T  8541363 aaggactaatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaatttacaaaat 8541264  T
Q  405 gtccatcaaatcagtccctccgt 427  Q
    ||| |||||||||||||||||||    
T  8541263 gtcaatcaaatcagtccctccgt 8541241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 17578022 - 17577905
Alignment:
Q  310 ctaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 409  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||| | ||||||||||||||| | |||||||   | | ||| |    
T  17578022 ctaatacctcaaattcgtccttgaattttgaaaaatcggcccatttcttccctgaattttgcaaaatatcaaattagttcatgaatttacaaaatgtcaa 17577923  T
Q  410 tcaaatcagtccctccgt 427  Q
    ||||||||||||||||||    
T  17577922 tcaaatcagtccctccgt 17577905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 307 - 452
Target Start/End: Complemental strand, 30468405 - 30468260
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    ||||| ||||||||| |||||||||||||||| |||||| ||  || |||||| || |||||| ||||||||| | ||||||| ||||||||||||||||    
T  30468405 ggactgatacctcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgt 30468306  T
Q  407 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    ||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  30468305 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 30468260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 308 - 444
Target Start/End: Original strand, 8539675 - 8539811
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||    || ||||| | |||||||| ||||||||| | ||||||||||||||||||| |||||    
T  8539675 gactaatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 8539774  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagt 444  Q
    |||||||  |||| |||| || ||||  |||||||||    
T  8539775 catcaaaatagtcgctccatccaaaagctccgttagt 8539811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 311 - 455
Target Start/End: Complemental strand, 18625129 - 18624985
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||  |||||||| | |||||||||||||||||||  |||||||    
T  18625129 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 18625030  T
Q  411 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||   |||| |||||| ||||  ||||||||||||||||||||    
T  18625029 caaaatggtccttccgtccaaaagctccgttagtagtgatgatgt 18624985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 30463900 - 30463989
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||    
T  30463900 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 42471548 - 42471637
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||| | |||||||    
T  42471548 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtacatgaattt 42471637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 28813856 - 28813735
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaa--tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacg 405  Q
    ||||||||||||||||||||||||||||||  |||||  | ||| || ||||||| |||||||| ||||||||| | |||||||||||||||   | | |    
T  28813856 gactaatacctcaaattcgtccttgaatttaaaaaaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaatttacaaaatg 28813757  T
Q  406 tccatcaaatcagtccctccgt 427  Q
    |  |||||||||||||||||||    
T  28813756 taaatcaaatcagtccctccgt 28813735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 427
Target Start/End: Complemental strand, 28822176 - 28822060
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    |||||||||||||||||||||||||||| |||||| ||  || |||||||||||||||| ||||||  | | || |||| |||||||   | | ||| ||    
T  28822176 taatacctcaaattcgtccttgaatttttaaaaataggtcaaattcgtccctgaattttgcgaaattgctattttgtccttgaatttacaaaatgtcaat 28822077  T
Q  411 caaatcagtccctccgt 427  Q
    |||||||||||||||||    
T  28822076 caaatcagtccctccgt 28822060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 34328916 - 34328797
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||  || ||||||| |||||||| | ||||| | | || |||| |||||||   | | |||    
T  34328916 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccatgaattttgcaaaatagctattttgtccttgaatttacaaaatgtc 34328817  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||| ||||||    
T  34328816 aatcaaatcagtcgctccgt 34328797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 428
Target Start/End: Complemental strand, 18728716 - 18728606
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    |||||||||||| |||||||| |    ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||       
T  18728716 tcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 18728617  T
Q  418 gtccctccgtc 428  Q
    |||||||||||    
T  18728616 gtccctccgtc 18728606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 399
Target Start/End: Complemental strand, 43492212 - 43492131
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 399  Q
    |||||||||| ||| |||||| ||||||| || || ||| |||||||||||| ||||||||| | |||||||||||||||||    
T  43492212 tcaaattcgtacttaaattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaatttta 43492131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 414
Target Start/End: Original strand, 38596878 - 38596974
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 414  Q
    ||||||||||||||||||||| |    ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||   ||||||||||||||    
T  38596878 tcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtccatcaaa 38596974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 415
Target Start/End: Original strand, 27075876 - 27075927
Alignment:
Q  364 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 415  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  27075876 aatttttcaaaatatcaaattagttcctgaatttaacagacgtccatcaaat 27075927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 428
Target Start/End: Original strand, 32087560 - 32087634
Alignment:
Q  354 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 428  Q
    ||||||||| |||| | ||||||||||| ||||||||| |||||| |||||||||||||||   |||||||||||    
T  32087560 ttcgtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacgtccatcaaaaaggtccctccgtc 32087634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 428
Target Start/End: Original strand, 35395343 - 35395453
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    |||||||| ||| |||||||| | |  ||||| || ||||||||| |||| | ||||||||||| ||||| |||||||||   ||||||||||||||       
T  35395343 tcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtccatcaaaaag 35395442  T
Q  418 gtccctccgtc 428  Q
    |||||||||||    
T  35395443 gtccctccgtc 35395453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 428
Target Start/End: Complemental strand, 43318174 - 43318064
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    ||||||||||||||||||||| |    ||||| ||  || ||||| |||| | ||||||||||| |||||||||||||||  ||||||||||| |||       
T  43318174 tcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaag 43318075  T
Q  418 gtccctccgtc 428  Q
    |||||||||||    
T  43318074 gtccctccgtc 43318064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 32134231 - 32134320
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    ||||||||||||||||| ||| ||||||||| |||||||  | || ||||||  ||||||||   ||||||| | |||||||||||||||    
T  32134231 gactaatacctcaaatttgtcattgaattttcaaaaatcaaccaaattcgtctttgaattttgtaaaatatctatttagtccctgaattt 32134320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 395
Target Start/End: Original strand, 41493847 - 41493931
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaat 395  Q
    ||||||||||| |||||||||||||||| ||||||| || || |||||||   ||||||  |||||||| | ||||||| |||||    
T  41493847 taatacctcaacttcgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgtgaaatatctatttagtccatgaat 41493931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 428
Target Start/End: Original strand, 33256410 - 33256520
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    |||||||||||| |||||||| | |  ||||| || ||| ||| | |||| | ||||||||||| ||| ||  |||||||  |||||||||||||||  |    
T  33256410 tcaaattcgtccctgaatttttacacgtcggccaacttcatccttcaattatgcgaaatatcaacttaatctttgaatttgtcagacgtccatcaaaaaa 33256509  T
Q  418 gtccctccgtc 428  Q
    |||||||||||    
T  33256510 gtccctccgtc 33256520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 415
Target Start/End: Original strand, 19997164 - 19997225
Alignment:
Q  354 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 415  Q
    ||||||||  |||||||| ||||||||||||| | ||||||||| |||||| | ||||||||    
T  19997164 ttcgtccccaaatttttcaaaatatcaaattacttcctgaatttaacagacattcatcaaat 19997225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 28819348 - 28819388
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcgg 348  Q
    ||||||||| |||||||| |||||||||||| |||||||||    
T  28819348 gactaatacatcaaattcctccttgaatttttaaaaatcgg 28819388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 3e-61; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 9121792 - 9121645
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  9121792 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 9121693  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  9121692 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 9121645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 47013206 - 47013059
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  47013206 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtc 47013107  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||||    
T  47013106 catcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 47013059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 311 - 455
Target Start/End: Complemental strand, 33602765 - 33602621
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |    
T  33602765 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattttacagacgtccgt 33602666  T
Q  411 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||| |||||||||||| |||| ||||||||||| |||||||||    
T  33602665 caaattagtccctccgtccaaaaggtccgttagtaatgatgatgt 33602621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 46583680 - 46583533
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  46583680 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 46583581  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||  ||||||||||| |||| |||||||| | ||||||||||    
T  46583580 catcaaatttgtccctccgtccaaaaggtccgttaatggtgatgatgt 46583533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 308 - 452
Target Start/End: Complemental strand, 4856090 - 4855946
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||| || | |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4856090 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 4855991  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    |||||||   ||||||||||| ||||  ||||||| | |||||||    
T  4855990 catcaaaatggtccctccgtccaaaagctccgttaatggtgatga 4855946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 308 - 452
Target Start/End: Complemental strand, 34778262 - 34778118
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||| || | |||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  34778262 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtc 34778163  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  34778162 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 34778118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 46582010 - 46582129
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46582010 gactaatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 46582109  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  46582110 aatcaaatcagtccctccgt 46582129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 34776569 - 34776658
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  34776569 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 306 - 427
Target Start/End: Complemental strand, 37346053 - 37345932
Alignment:
Q  306 aggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacg 405  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||| |||||||||||||||||||||||||||   | | |    
T  37346053 aggactaatacctcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatg 37345954  T
Q  406 tccatcaaatcagtccctccgt 427  Q
    || |||||||||||||||||||    
T  37345953 tcaatcaaatcagtccctccgt 37345932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 308 - 455
Target Start/End: Original strand, 2869579 - 2869726
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||| || |||||||||||||||    
T  2869579 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgtc 2869678  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  2869679 catcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 2869726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 8167942 - 8168061
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||| |   | | |||    
T  8167942 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatgtacaaaatgtc 8168041  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  8168042 aatcaaatcagtccctccgt 8168061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 8169657 - 8169538
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||   | | |||    
T  8169657 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaatttacaaaatgtc 8169558  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||||| |||||||||    
T  8169557 aatcaaatcaatccctccgt 8169538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 25276742 - 25276861
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||   | | |||    
T  25276742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 25276841  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  25276842 aatcaaatcagtccctccgt 25276861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 26223587 - 26223676
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  26223587 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 26223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 308 - 452
Target Start/End: Complemental strand, 6818802 - 6818658
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||  ||||||||| ||||  | ||||||| | |||||||||||||||||||||||||    
T  6818802 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgtc 6818703  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  6818702 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6818658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 308 - 452
Target Start/End: Complemental strand, 25278492 - 25278348
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||| | | ||||||| ||||||||||| |||||    
T  25278492 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacgtc 25278393  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  25278392 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 25278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 308 - 452
Target Start/End: Complemental strand, 31238619 - 31238475
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||| ||||||||||||| |||||||||| || || ||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  31238619 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 31238520  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    |||||||   |||| || ||| ||||  ||||||||| |||||||    
T  31238519 catcaaaatggtccatctgtccaaaagctccgttagtggtgatga 31238475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 9120039 - 9120158
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  9120039 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 9120138  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  9120139 aatcaaattagtccctccgt 9120158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 27089368 - 27089249
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||| |||||||||||   | | |||    
T  27089368 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccttgaattttgtgaaatatcaaattaatccctgaatttacaaaatgtc 27089269  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||||||||| |||||    
T  27089268 aatcaaatcagtccttccgt 27089249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 305 - 452
Target Start/End: Original strand, 37344339 - 37344486
Alignment:
Q  305 aaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagac 404  Q
    |||||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||| | | ||||||  ||||||||||| ||    
T  37344339 aaggactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatac 37344438  T
Q  405 gtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    ||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  37344439 gtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 37344486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 308 - 455
Target Start/End: Original strand, 27087283 - 27087430
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    |||||||||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||||| ||||||||| | ||||||||||||||||||| ||||    
T  27087283 gactaatacctcaaattcgtccttaaattttaaaaaatcggtcaaattt-gtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgt 27087381  T
Q  407 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||   | || |||||| ||||  ||||||||| ||||||||||    
T  27087382 ccatcaaaatggcccatccgtccaaaagctccgttagtggtgatgatgt 27087430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 47011456 - 47011575
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||   | | |||    
T  47011456 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccatgaatttttcgaaatatcaaattagtccctgaatttacaaaaagtc 47011555  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||| |||||||||||||    
T  47011556 aatcaactcagtccctccgt 47011575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 301 - 410
Target Start/End: Complemental strand, 25279084 - 25278975
Alignment:
Q  301 taaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac 400  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| || || ||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  25279084 taaaaatgactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttac 25278985  T
Q  401 agacgtccat 410  Q
    ||||||||||    
T  25278984 agacgtccat 25278975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 51896276 - 51896129
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    |||| ||||||||||| ||||||| |||||| ||||||| | ||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||| ||    
T  51896276 gactgatacctcaaatccgtccttaaattttaaaaaatcagtcaaattt-gtccctgaattttgcgaaatatctatttagtccctgaattttacagatgt 51896178  T
Q  407 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||  |||||||||||| ||||  || |||||| ||||||||||    
T  51896177 ccatcaaaatagtccctccgtccaaaagctctgttagtggtgatgatgt 51896129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 1444270 - 1444151
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||| ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||   | | |||    
T  1444270 gactaatacctcaaaatagtccttaaattttgaaaaatcggccaattttgtccctgaatttttcaaaatatcaaattagtccctgaatttacaaaatgtc 1444171  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  1444170 aatcaaattagtccctccgt 1444151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 3013600 - 3013447
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| ||| ||| |  || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||    
T  3013600 gactaatacctcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgtc 3013501  T
Q  408 ------catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
          |||||||  |||||||||||| ||||  ||||||||| ||||||||||    
T  3013500 catggacatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 3013447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 307 - 397
Target Start/End: Original strand, 4854409 - 4854499
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    |||||||||| ||||||||||||||||||||||||||||||   ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  4854409 ggactaatacttcaaattcgtccttgaattttgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaattt 4854499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 308 - 451
Target Start/End: Complemental strand, 50556221 - 50556078
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||| |||||||||||| ||||||||| ||||||| |  || |||||| ||||||||| ||||||||| | ||||||||| |||||||||||||||    
T  50556221 gactaatatctcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattttacagacgtc 50556122  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatg 451  Q
     ||||||   ||||||||||| ||||  ||||||||| ||||||    
T  50556121 tatcaaaatggtccctccgtccaaaagctccgttagtggtgatg 50556078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 31236819 - 31236938
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||| ||||||||| | ||||| |||||||||   | |  |    
T  31236819 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattt-gtccctgaattttgcgaaatatctatttagttcctgaatttacaaaatat 31236917  T
Q  407 ccatcaaatcagtccctccgt 427  Q
    | |||||||||||||||||||    
T  31236918 caatcaaatcagtccctccgt 31236938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 425
Target Start/End: Original strand, 33599229 - 33599335
Alignment:
Q  319 caaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcag 418  Q
    ||||||||||||||||||||||||||||||  || ||||||| |||||||| ||||||||||||||| || ||||||||   | | ||| ||||||||||    
T  33599229 caaattcgtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaatttacaaaatgtcaatcaaatcag 33599328  T
Q  419 tccctcc 425  Q
    |||||||    
T  33599329 tccctcc 33599335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 386 - 455
Target Start/End: Original strand, 1442599 - 1442668
Alignment:
Q  386 gtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  1442599 gtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 1442668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 52641888 - 52642007
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac-agacgt 406  Q
    ||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||| ||||||||  | ||||| ||| || ||||| | | ||    
T  52641888 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagt-cctcaaatttacaaaatgt 52641986  T
Q  407 ccatcaaatcagtccctccgt 427  Q
     ||||||||||||||||||||    
T  52641987 tcatcaaatcagtccctccgt 52642007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 2871165 - 2871046
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||| |||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||| | | || |||  |||||||   | | |||    
T  2871165 gactaatatctcaaattcgtccttgaatttttaaaaatcggctaaattcgtccctgaattttgcgaaatagctattttgtctttgaatttacaaaatgtc 2871066  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  2871065 aatcaaatcagtccctccgt 2871046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 354 - 455
Target Start/End: Original strand, 15104487 - 15104588
Alignment:
Q  354 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 453  Q
    ||||| |||||||||| ||||||||| | ||||||||||||||||||||||||||||||||   |||| |||||| ||||  ||| ||||| ||||||||    
T  15104487 ttcgttcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaagctccattagtggtgatgat 15104586  T
Q  454 gt 455  Q
    ||    
T  15104587 gt 15104588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 311 - 399
Target Start/End: Complemental strand, 52643736 - 52643648
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 399  Q
    ||||||||||||||||||||| |||||| ||||||| |  || |||||||||||||||| ||||||||  | |||||||||||||||||    
T  52643736 taatacctcaaattcgtccttaaatttttaaaaatcagttaaattcgtccctgaattttgcgaaatatttatttagtccctgaatttta 52643648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 37088225 - 37088106
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||| |||||||||||| |||||||||| || ||||| |||||||||| ||||||| | | || |||| | |||||   | | |||    
T  37088225 gactaatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattttgtccttaaatttacaaaatgtc 37088126  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  37088125 aatcaaatcagtccctccgt 37088106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 423
Target Start/End: Original strand, 50554164 - 50554278
Alignment:
Q  309 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 408  Q
    |||||||||||||||||||||||||||||| |||||||||  || ||||||||||||||||   ||||| | | ||||| |||||||||   | | |||     
T  50554164 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtaaaatagctatttagttcctgaatttgcaaaatgtca 50554263  T
Q  409 atcaaatcagtccct 423  Q
    |||||||||||||||    
T  50554264 atcaaatcagtccct 50554278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 369
Target Start/End: Original strand, 33599187 - 33599248
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 369  Q
    |||||||||||||||||||||||||||||||||||||||||  || ||||||| ||||||||    
T  33599187 gactaatacctcaaattcgtccttgaattttgaaaaatcgggcaaattcgtccttgaatttt 33599248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 369
Target Start/End: Original strand, 1442551 - 1442611
Alignment:
Q  309 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 369  Q
    |||||||||||| | | |||||||||||||||||||||||| |||||||||||||||||||    
T  1442551 actaatacctcacaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttt 1442611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 3011858 - 3011974
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    ||||||||||||||||||||| |||||| ||||||| |  || ||||| |||||||||| ||||||||| | |||||| ||||||||   | | ||| ||    
T  3011858 taatacctcaaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtcaat 3011957  T
Q  411 caaatcagtccctccgt 427  Q
    ||||||||||| |||||    
T  3011958 caaatcagtccatccgt 3011974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 369
Target Start/End: Original strand, 6816866 - 6816926
Alignment:
Q  309 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 369  Q
    |||||||||||||||||||||||||||||| |||||||||  || ||||||||||||||||    
T  6816866 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaatttt 6816926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 388
Target Start/End: Original strand, 25278854 - 25278934
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatc-ggcaaatttcgtccctgaatttttcgaaatatcaaattagtc 388  Q
    |||||||||||||||||| |||||||||||| ||||||| | ||||||| ||||||||||||| ||||||||| | ||||||    
T  25278854 gactaatacctcaaattcatccttgaattttcaaaaatcagtcaaattt-gtccctgaattttgcgaaatatctatttagtc 25278934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 51894570 - 51894686
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 409  Q
    |||||| |||||||||| |||||||||| |||||| || ||||||| ||| ||||||||| ||||||||  | |||||||||||||||   | | ||| |    
T  51894570 taatacatcaaattcgttcttgaattttaaaaaatgggtcaaattt-gtctctgaattttgcgaaatatatatttagtccctgaatttacaaaatgtcaa 51894668  T
Q  410 tcaaatcagtccctccgt 427  Q
    ||||||||||||||||||    
T  51894669 tcaaatcagtccctccgt 51894686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 428
Target Start/End: Original strand, 42134492 - 42134602
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    ||||||||||||||||||||| |    ||||| ||  || ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||       
T  42134492 tcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 42134591  T
Q  418 gtccctccgtc 428  Q
    |||||||||||    
T  42134592 gtccctccgtc 42134602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 23577636 - 23577725
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    ||||||||| |||||||| ||||| |||  |||||||||||  ||||||| || | |||||| ||||||||||||||||||  |||||||    
T  23577636 gactaatacatcaaattcatccttcaatcctgaaaaatcgggcaatttcgaccttcaattttgcgaaatatcaaattagtcaatgaattt 23577725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 45044949 - 45045009
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattt 368  Q
    ||||||||||||||||||||||||||||||| |||||| ||   | |||||||||||||||    
T  45044949 gactaatacctcaaattcgtccttgaattttaaaaaattggtccaattcgtccctgaattt 45045009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 5783427 - 5783500
Alignment:
Q  371 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 444  Q
    |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  5783427 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 5783500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 414
Target Start/End: Complemental strand, 18184017 - 18183961
Alignment:
Q  358 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 414  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  18184017 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 18183961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 414
Target Start/End: Complemental strand, 36895588 - 36895528
Alignment:
Q  354 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 414  Q
    ||||||| | |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  36895588 ttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 36895528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 427
Target Start/End: Original strand, 27940654 - 27940727
Alignment:
Q  354 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 427  Q
    ||||||||| |||| | ||||||||||| ||| ||| |||||||  |||||||||||||||   ||||||||||    
T  27940654 ttcgtccctcaattatgcgaaatatcaatttaatccttgaatttatcagacgtccatcaaaaaggtccctccgt 27940727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 2e-59; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 307 - 455
Target Start/End: Original strand, 43519423 - 43519571
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  43519423 ggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgt 43519522  T
Q  407 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||||| ||||||||||| |||| |||| ||| ||||||||||||    
T  43519523 ccatcaaatccgtccctccgtccaaaaggtccattaatagtgatgatgt 43519571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 307 - 427
Target Start/End: Complemental strand, 4173830 - 4173710
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | ||||    
T  4173830 ggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaacgt 4173731  T
Q  407 ccatcaaatcagtccctccgt 427  Q
    | ||||| |||||||||||||    
T  4173730 caatcaactcagtccctccgt 4173710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 43507167 - 43507286
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  43507167 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 43507266  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  43507267 aatcaaatcagtccctccgt 43507286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 43508742 - 43508623
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  43508742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 43508643  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  43508642 aatcaaatcagtccctccgt 43508623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 309 - 455
Target Start/End: Original strand, 49523125 - 49523271
Alignment:
Q  309 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 408  Q
    |||||||||||||||||||| ||||||||| |||||||||| || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||| |    
T  49523125 actaatacctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttc 49523224  T
Q  409 atcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  49523225 atcaaaatggtccctccgtccaaaaaatccgttagtggtgatgatgt 49523271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 311 - 455
Target Start/End: Complemental strand, 41761867 - 41761723
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    |||||||||||||||||||||||||||| |||||||||| || ||||||||  |||||| ||||||||| | ||||||||||||||||||||||||||||    
T  41761867 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41761768  T
Q  411 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||   ||||||||||| ||||  | ||||||| ||||||||||    
T  41761767 caaaatggtccctccgtccaaaagcttcgttagtggtgatgatgt 41761723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 307 - 427
Target Start/End: Complemental strand, 33266100 - 33265980
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||   | | ||    
T  33266100 ggactaatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 33266001  T
Q  407 ccatcaaatcagtccctccgt 427  Q
    | |||||||||||||||||||    
T  33266000 caatcaaatcagtccctccgt 33265980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 319273 - 319392
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||||   | | |||    
T  319273 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtc 319372  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||| ||||||||||||    
T  319373 aatcaaaccagtccctccgt 319392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 5437811 - 5437930
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  5437811 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 5437910  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  5437911 aatcaaattagtccctccgt 5437930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 33264382 - 33264501
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||||| |||||||||   | | |||    
T  33264382 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaatttacaaaatgtc 33264481  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  33264482 aatcaaatcagtccctccgt 33264501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 51013975 - 51013856
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| |||||||||||||   | | |||    
T  51013975 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaatttacaaaatgtc 51013876  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  51013875 aatcaaatcagtccctccgt 51013856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 833223 - 833342
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  833223 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 833322  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  833323 aatcaaattagtccctccgt 833342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 5439736 - 5439617
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  5439736 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 5439637  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  5439636 aatcaaattagtccctccgt 5439617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 308 - 452
Target Start/End: Original strand, 51011926 - 51012070
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||| |||||||||||||||||||||| |||||||||  || ||| | | |||||||| ||||||||| | |||||| ||||||||||||||||||    
T  51011926 gactaatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacgtc 51012025  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    |||||||   ||||||||||| ||||  || ||||||||||||||    
T  51012026 catcaaaatggtccctccgtccaaaagctctgttagtagtgatga 51012070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 320989 - 320870
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||||||| |||| ||   | | |||    
T  320989 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccttgaaattacaaaatgtc 320890  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||| |||||||||||||    
T  320889 aatcaactcagtccctccgt 320870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 835131 - 835012
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||| | ||||| ||||||||||| |||||||||||||| ||||||||||||||   | |||||    
T  835131 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaacgtc 835032  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  835031 aatcaaattagtccctccgt 835012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 4169686 - 4169805
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||| |   ||||||||| ||||||||| |||||||||||||||||||||||||||   | | |||    
T  4169686 gactaatacctcaaattcgtccttgaattttgaaaaattgatcaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 4169785  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||| ||||||||||||    
T  4169786 aatcaaaccagtccctccgt 4169805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 299 - 455
Target Start/End: Original strand, 41781530 - 41781686
Alignment:
Q  299 tataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    ||||| || ||||||||||||||||| || |||||||||| ||||||||| ||||||| ||||||||||||| | ||||||  | |||||||||||||||    
T  41781530 tataataatgactaatacctcaaatttgttcttgaattttaaaaaatcggtcaaattt-gtccctgaattttgcaaaatatttatttagtccctgaattt 41781628  T
Q  398 tacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||| |||||||||   ||||||||||| ||||  |||||||||  |||||||||    
T  41781629 tacagacatccatcaaaatggtccctccgtccaaaagctccgttagtgatgatgatgt 41781686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 35401749 - 35401868
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||  |||||||| | ||||||| |||||||   | | |||    
T  35401749 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaatttacaaaatgtc 35401848  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  35401849 aatcaaatcagtccctccgt 35401868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 308 - 452
Target Start/End: Complemental strand, 35404569 - 35404425
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||| |||| | |||||||||| |||||||||| || ||||||| | |||||| ||||||||  | ||| |||||||||||||||||||||    
T  35404569 gactaatacctcagattcatacttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtc 35404470  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    || ||||   |||| |||||| ||||  ||||||||| |||||||    
T  35404469 caacaaaatggtccatccgtccaaaagctccgttagtggtgatga 35404425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 307 - 455
Target Start/End: Original strand, 48813786 - 48813934
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    |||||||||||||||||||||||||||||||| ||||||| || || ||  |||||||||||| | ||||||  | ||||| ||||||||||| ||||||    
T  48813786 ggactaatacctcaaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgcaaaatatatatttagttcctgaattttatagacgt 48813885  T
Q  407 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||   |||||| |||| ||||  || ||| || ||||||||||    
T  48813886 ccatcaaaatggtcccttcgtccaaaagctctgttggtggtgatgatgt 48813934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 49524822 - 49524703
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| | ||||| | | |||||||||||||||   | | |||    
T  49524822 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgtc 49524723  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||||||||| |||||    
T  49524722 aatcaaatcagtccttccgt 49524703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 318 - 427
Target Start/End: Original strand, 39345574 - 39345683
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    ||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||| | | |||||||||||||||   | | ||| |||||||||    
T  39345574 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaatttacaaaatgtcaatcaaatca 39345673  T
Q  418 gtccctccgt 427  Q
    ||| ||||||    
T  39345674 gtctctccgt 39345683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 20493827 - 20493946
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||| ||||||||| ||| |||||| || ||||| | |||||||| ||||||||| | ||||| |||||||||   | | |||    
T  20493827 gactaatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaatttacaaaatgtc 20493926  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  20493927 aatcaaatcagtccctccgt 20493946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 313 - 397
Target Start/End: Complemental strand, 43521193 - 43521109
Alignment:
Q  313 atacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    |||||||||||| || |||||||||||||||||| |  ||||||||   |||||||| |||||||||||||||||||||||||||    
T  43521193 atacctcaaatttgttcttgaattttgaaaaatcagtcaatttcgtttttgaattttgcgaaatatcaaattagtccctgaattt 43521109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 48645255 - 48645374
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| ||||||| |  || ||||||| |||||||| ||||||||| | |||||||  ||||||   | | ||     
T  48645255 gactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtt 48645354  T
Q  408 catcaaatcagtccctccgt 427  Q
    |||||||||||| |||||||    
T  48645355 catcaaatcagtacctccgt 48645374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 455
Target Start/End: Complemental strand, 48646852 - 48646724
Alignment:
Q  327 tccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccg 426  Q
    |||||||||||| |||| || || || ||||||| |||||||  ||||||||| | |||||||||||||||||||||| | |||||||   |||| ||||    
T  48646852 tccttgaattttcaaaagtcagctaaattcgtccttgaatttagcgaaatatctatttagtccctgaattttacagaccttcatcaaaatggtccttccg 48646753  T
Q  427 tctaaaatgtccgttagtagtgatgatgt 455  Q
    || ||||  | ||||||| ||||||||||    
T  48646752 tccaaaagcttcgttagtggtgatgatgt 48646724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 424
Target Start/End: Original strand, 11601674 - 11601786
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 409  Q
    |||||||| |||||||| |||||||||| ||||||| | |||||||  ||||  |||||| | |||||| | ||||||||||||||||||||||||||||    
T  11601674 taatacctaaaattcgttcttgaattttcaaaaatcagtcaaattta-tccccaaattttgcaaaatat-atattagtccctgaattttacagacgtcca 11601771  T
Q  410 tcaaatcagtccctc 424  Q
    |||||  ||||||||    
T  11601772 tcaaaatagtccctc 11601786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 357 - 455
Target Start/End: Original strand, 42980684 - 42980782
Alignment:
Q  357 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||| |||||||| |||||| || | ||||||||| ||||||||||||||||||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  42980684 gtccatgaattttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 42980782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 427
Target Start/End: Original strand, 11254113 - 11254238
Alignment:
Q  302 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 401  Q
    ||||| ||| ||||||||||||||||||||||||||| |||||||||| || | |||| || |||||| ||||||| |   || |||| |||||||   |    
T  11254113 aaaaatgacaaatacctcaaattcgtccttgaatttttaaaaatcggccaaatccgtctctaaattttgcgaaatagctcttttgtccttgaatttacaa 11254212  T
Q  402 gacgtccatcaaatcagtccctccgt 427  Q
     | ||| |||||||||||||||||||    
T  11254213 aatgtcaatcaaatcagtccctccgt 11254238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 444
Target Start/End: Original strand, 39083676 - 39083775
Alignment:
Q  345 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 444  Q
    ||||| || ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  39083676 tcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 39083775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 414
Target Start/End: Complemental strand, 44558607 - 44558511
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 414  Q
    |||| |||||||||||||||| |    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  44558607 tcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 44558511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 444
Target Start/End: Original strand, 5484577 - 5484676
Alignment:
Q  345 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 444  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  5484577 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 5484676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 444
Target Start/End: Original strand, 39921531 - 39921630
Alignment:
Q  345 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 444  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  39921531 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 39921630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 444
Target Start/End: Complemental strand, 43779954 - 43779855
Alignment:
Q  345 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 444  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  43779954 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 43779855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 420
Target Start/End: Original strand, 2691368 - 2691485
Alignment:
Q  302 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 401  Q
    |||||||| ||||||||||| ||| || ||||||||| ||||||| || || |||||||   |||||| | ||||||| | ||||||||||||||||  |    
T  2691368 aaaaaggaataatacctcaacttcatc-ttgaattttcaaaaatcagccaaattcgtccacaaattttgcaaaatatctatttagtccctgaatttttaa 2691466  T
Q  402 gacgtccatcaaatcagtc 420  Q
     | ||| ||||||||||||    
T  2691467 aatgtcaatcaaatcagtc 2691485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 39189419 - 39189516
Alignment:
Q  345 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 442  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||    
T  39189419 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 39189516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 427
Target Start/End: Complemental strand, 44794838 - 44794765
Alignment:
Q  354 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 427  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  44794838 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 44794765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 419
Target Start/End: Original strand, 20819986 - 20820096
Alignment:
Q  309 actaatacctcaaattcgtccttgaattttgaaaaatc-ggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||| |||||||||||||||| ||||||| | |||||||  | ||| |||||| | ||||||  | ||||||||||||||||  | | |||    
T  20819986 actaatacctcaacttcgtccttgaattttcaaaaatcagtcaaattt-attcctaaattttgcaaaatatttatttagtccctgaattttcaaaatgtc 20820084  T
Q  408 catcaaatcagt 419  Q
     |||||||||||    
T  20820085 aatcaaatcagt 20820096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 414
Target Start/End: Original strand, 27624869 - 27624912
Alignment:
Q  371 cgaaatatcaaattagtccctgaattttacagacgtccatcaaa 414  Q
    ||||||||||| |||||||||||||||  |||||||||||||||    
T  27624869 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 27624912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 444
Target Start/End: Original strand, 32652136 - 32652235
Alignment:
Q  345 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 444  Q
    ||||| || ||||||||  |||||  |||||||||||| |||||| |||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  32652136 tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 32652235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 42982541 - 42982422
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||| | |||||  |||||||||||| ||||||| |  || |||||||||||||||| |||||||   | || |||| |||||||   | | |||    
T  42982541 gactaatacgttaaatttttccttgaatttttaaaaatctgtcaaattcgtccctgaattttgcgaaatagttattttgtccttgaatttacaaaatgtc 42982442  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  42982441 aatcaaatcagtccctccgt 42982422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 444
Target Start/End: Complemental strand, 44994374 - 44994275
Alignment:
Q  345 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 444  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  |||||||| || |||| ||||||||||    
T  44994374 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccatccaaaaggtccgttagt 44994275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 414
Target Start/End: Complemental strand, 52868254 - 52868167
Alignment:
Q  327 tccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 414  Q
    |||||||||||| |||||||||  || ||||||  | |||||| ||||||||| | |||||| |||||||| ||||||| | ||||||    
T  52868254 tccttgaattttaaaaaatcggtcaaattcgtctataaattttgcgaaatatctatttagtctctgaatttaacagacgcctatcaaa 52868167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 428
Target Start/End: Original strand, 35996109 - 35996183
Alignment:
Q  354 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 428  Q
    ||||||||| |||| | | ||||||||| ||| |||||||||||  |||||||||||||||   |||||||||||    
T  35996109 ttcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgtc 35996183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 427
Target Start/End: Complemental strand, 10372820 - 10372711
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    |||||||||||| |||||||| |    ||||| || || |||||| |||| | ||||||||||| ||  |||||||||||  |||||||||||||||       
T  10372820 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtcagacgtccatcaaaaag 10372721  T
Q  418 gtccctccgt 427  Q
    ||||||||||    
T  10372720 gtccctccgt 10372711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 427
Target Start/End: Original strand, 47941857 - 47941930
Alignment:
Q  354 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 427  Q
    |||||| || |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  47941857 ttcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 47941930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 399
Target Start/End: Complemental strand, 2693373 - 2693285
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 399  Q
    ||||||||||| |||||| ||||||||| ||||||| || || ||  | ||| |||||| ||||||||| | ||||||  |||||||||    
T  2693373 taatacctcaacttcgtctttgaattttaaaaaatcagccaaatttattcctaaattttgcgaaatatctatttagtctttgaatttta 2693285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 2827468 - 2827524
Alignment:
Q  372 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 428  Q
    |||||||||| ||||||| |||||||  |||||||||||||||   |||||||||||    
T  2827468 gaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtc 2827524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 414
Target Start/End: Complemental strand, 13451058 - 13450998
Alignment:
Q  354 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 414  Q
    ||||||||  |||||  |||||||||||| |||||| |||||||  |||||||||||||||    
T  13451058 ttcgtcccccaatttaacgaaatatcaaaatagtccttgaatttatcagacgtccatcaaa 13450998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 116; Significance: 8e-59; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 308 - 455
Target Start/End: Original strand, 3294 - 3441
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3294 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 3393  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||  ||||||||||| |||| |||||||| ||||||||||||    
T  3394 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 3441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 308 - 455
Target Start/End: Original strand, 4466 - 4613
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4466 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 4565  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||  ||||||||||| |||| |||||||| ||||||||||||    
T  4566 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 4613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 14432 - 14313
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  14432 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 14333  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  14332 aatcaaatcagtccctccgt 14313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 5e-57; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 307 - 455
Target Start/End: Complemental strand, 32456016 - 32455868
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    |||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  32456016 ggactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgt 32455917  T
Q  407 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||||||||||||||||| ||||||||||||| || |||||||||    
T  32455916 ccatcaaatcagtccctccgtccaaaatgtccgttaataatgatgatgt 32455868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 326 - 453
Target Start/End: Original strand, 3456766 - 3456893
Alignment:
Q  326 gtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 425  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3456766 gtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 3456865  T
Q  426 gtctaaaatgtccgttagtagtgatgat 453  Q
    ||| ||||| ||||||| ||||||||||    
T  3456866 gtccaaaatatccgttaatagtgatgat 3456893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 13613706 - 13613559
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||| |||||||||||||||||||||||||||||  || |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13613706 gactaataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13613607  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||| |||||||||||| |||| |||| ||||| ||||||||||    
T  13613606 catcaaattagtccctccgtccaaaaggtccattagtggtgatgatgt 13613559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 32518586 - 32518467
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||   | | |||    
T  32518586 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 32518487  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  32518486 aatcaaatcagtccctccgt 32518467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 308 - 452
Target Start/End: Complemental strand, 32439215 - 32439071
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||| ||| ||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  32439215 gactaatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 32439116  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    |||||||   ||||||||||| ||||  || ||||||||||||||    
T  32439115 catcaaaatggtccctccgtccaaaagatctgttagtagtgatga 32439071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 3480746 - 3480627
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||   | | |||    
T  3480746 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaatttacaaaatgtc 3480647  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  3480646 aatcaaattagtccctccgt 3480627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 32454248 - 32454367
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||   | | |||    
T  32454248 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 32454347  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  32454348 aatcaaattagtccctccgt 32454367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 309 - 455
Target Start/End: Original strand, 20523367 - 20523513
Alignment:
Q  309 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 408  Q
    |||||||| |||||||| |||| ||||||| |||||||||  || ||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||    
T  20523367 actaatacatcaaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 20523466  T
Q  409 atcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  20523467 atcaaaatggtccctccgtccaaaagttctgttagtggtgatgatgt 20523513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 308 - 452
Target Start/End: Original strand, 32516877 - 32517021
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| | ||||| | | |||| || ||||||||||| |||||    
T  32516877 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatacgtc 32516976  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  32516977 catcaaaattgtccctccgtccaaaagctccgttagtggtgatga 32517021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 312 - 455
Target Start/End: Original strand, 10568403 - 10568546
Alignment:
Q  312 aatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatc 411  Q
    ||||| ||||||||||||||||||||| ||||||| |  || ||||||| |||||||  ||||||||  | ||||||||||||||||||||||||| |||    
T  10568403 aatacatcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgtctatc 10568502  T
Q  412 aaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||  |||||||||||| ||||  ||||||||| ||||||||||    
T  10568503 aaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 10568546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 18645192 - 18645074
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||||||||||||| | | |||||| ||||||||| ||||||||||||||||||| |||||||   | | |||    
T  18645192 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-acaattcgtctctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtc 18645094  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  18645093 aatcaaatcagtccctccgt 18645074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 311 - 455
Target Start/End: Complemental strand, 7373079 - 7372935
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    |||||||||||||||||  ||||||||| |||||| ||  || |||||||||||||||| ||||||||  | |||||||||||||||||||| |||||||    
T  7373079 taatacctcaaattcgtgattgaatttttaaaaattggtcaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttacaggcgtccat 7372980  T
Q  411 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||   ||||||||||| ||||  ||| ||||| ||||||||||    
T  7372979 caaaatggtccctccgtccaaaagctccattagtggtgatgatgt 7372935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 309 - 452
Target Start/End: Original strand, 11355223 - 11355366
Alignment:
Q  309 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 408  Q
    |||||||||||||||||||||||||||||| |||||||||  || |||||| |||||||||  |||||||| | | | ||||||||||||||||||| ||    
T  11355223 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggcc 11355322  T
Q  409 atcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    | ||||   ||||||||||| ||||  |||| |||| |||||||    
T  11355323 accaaaatggtccctccgtccaaaagctccggtagtggtgatga 11355366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 308 - 428
Target Start/End: Complemental strand, 10570008 - 10569888
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| ||||||| || || ||||||| |||||||| | ||||||| | |||||||  ||||||   | | |||    
T  10570008 gactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagtcctcgaatttacaaaatgtc 10569909  T
Q  408 catcaaatcagtccctccgtc 428  Q
    |||||||||||||||||||||    
T  10569908 catcaaatcagtccctccgtc 10569888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 13610690 - 13610808
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcg-gcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    ||||||||||| ||||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||||||| | |||||   | | ||    
T  13610690 gactaataccttaaattcgtccttgaattttgaaaaatcgatcaaattt-gtccctgaattttgcgaaatatcaaattagtccat-aatttacaaaatgt 13610787  T
Q  407 ccatcaaatcagtccctccgt 427  Q
    | |||||||||||||||||||    
T  13610788 caatcaaatcagtccctccgt 13610808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 308 - 455
Target Start/End: Original strand, 6899485 - 6899632
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||| ||||||||||||| ||||||| |  || |||||| || ||||||  |||||||| | ||||||||| |||||||||||| ||    
T  6899485 gactaatacctcaaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtccctaaattttacagacatc 6899584  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||   |||||| |||| ||||  |||||||||  |||||||||    
T  6899585 catcaaaatggtcccttcgtccaaaagctccgttagtgttgatgatgt 6899632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 308 - 397
Target Start/End: Complemental strand, 9400124 - 9400035
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    ||||||||||||||||||||||||||||||||||||||| |  || ||| ||| |||||||| ||||||||| |||||||||| ||||||    
T  9400124 gactaatacctcaaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaattt 9400035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 427
Target Start/End: Complemental strand, 11357289 - 11357164
Alignment:
Q  302 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 401  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||  || ||||||||||||||||   ||||| ||| |||||||||||||||   |    
T  11357289 aaaaaagactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaatttacaa 11357190  T
Q  402 gacgtccatcaaatcagtccctccgt 427  Q
     | |||  ||||||||||||||||||    
T  11357189 aatgtcattcaaatcagtccctccgt 11357164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 32437140 - 32437208
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaat 376  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  32437140 gactaatacctcaaatttgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaat 32437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 296 - 427
Target Start/End: Complemental strand, 6902996 - 6902868
Alignment:
Q  296 tattataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaat 395  Q
    ||||||||||  ||||||||||||||||||||||||||||||| ||||||| |  || ||||||||| |||||| || |||||| | |||||||  ||||    
T  6902996 tattataaaa--gactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccctaaattttgcg-aatatctatttagtcctcgaat 6902900  T
Q  396 tttacagacgtccatcaaatcagtccctccgt 427  Q
    ||   | | |||||||||||||||||||||||    
T  6902899 ttacaaaatgtccatcaaatcagtccctccgt 6902868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 455
Target Start/End: Original strand, 9398713 - 9398807
Alignment:
Q  361 ctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||| ||||||||| | ||||||||||||||||| |||||| |||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  9398713 ctgaattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttagtggtgatgatgt 9398807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 7371175 - 7371244
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaata 377  Q
    |||||||||||||| |||||||||||||||| |||||||||| || || ||||||||||||| |||||||    
T  7371175 gactaatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaata 7371244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 427
Target Start/End: Complemental strand, 20525432 - 20525304
Alignment:
Q  299 tataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttt 398  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||| ||  || ||| |||||||||||| | ||||| | | || |||| |||||||     
T  20525432 tataaaaacgactaatacctcaaattcgtctttgaatttttaaaaataggtcaaattcatccctgaattttgcaaaatagctattttgtccttgaattta 20525333  T
Q  399 acagacgtccatcaaatcagtccctccgt 427  Q
      | | ||| |||||||||||||||||||    
T  20525332 caaaatgtcaatcaaatcagtccctccgt 20525304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 369
Target Start/End: Complemental strand, 8605414 - 8605353
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 369  Q
    ||||||||||||||||||||||||||||||| ||||||| || || ||||||||| ||||||    
T  8605414 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctaaatttt 8605353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 379 - 455
Target Start/End: Original strand, 7049828 - 7049904
Alignment:
Q  379 caaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||| |||||||||||||||||||||||||||||   ||||||||||| ||||  |||||| || ||||||||||    
T  7049828 caaattcgtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttcgtggtgatgatgt 7049904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 323 - 427
Target Start/End: Complemental strand, 14338584 - 14338480
Alignment:
Q  323 ttcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccc 422  Q
    |||||||||||||||| ||||||| || || |||||||   |||||| |||||| || ||||  ||||||||||| ||||||||||||||||   |||||    
T  14338584 ttcgtccttgaatttttaaaaatcagccaaattcgtcctcaaattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatggtccc 14338485  T
Q  423 tccgt 427  Q
    |||||    
T  14338484 tccgt 14338480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 414
Target Start/End: Complemental strand, 3018519 - 3018450
Alignment:
Q  345 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 414  Q
    ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  3018519 tcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 3018450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 21068628 - 21068744
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    |||||||||||||||||||||||||||| || |||| |  || |||||||   |||||| ||||||||| | |||||||  ||||||   | | ||| ||    
T  21068628 taatacctcaaattcgtccttgaattttcaacaatcagtcaaattcgtccacaaattttacgaaatatctatttagtcctcgaatttacaaaatgtcaat 21068727  T
Q  411 caaatcagtccctccgt 427  Q
    |||||||||||||||||    
T  21068728 caaatcagtccctccgt 21068744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 444
Target Start/End: Complemental strand, 17952129 - 17952030
Alignment:
Q  345 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 444  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  17952129 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 17952030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 369
Target Start/End: Original strand, 7049790 - 7049847
Alignment:
Q  312 aatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 369  Q
    |||| ||||||||| |||||||||||| ||||||| || || ||||||||||||||||    
T  7049790 aatatctcaaattcttccttgaattttcaaaaatcagccaaattcgtccctgaatttt 7049847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 414
Target Start/End: Original strand, 2968185 - 2968245
Alignment:
Q  354 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 414  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||  |||||||||||||||    
T  2968185 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaa 2968245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 346
Target Start/End: Original strand, 21091109 - 21091144
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatc 346  Q
    |||||||||||||||||||||||||||| |||||||    
T  21091109 taatacctcaaattcgtccttgaattttcaaaaatc 21091144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 433
Target Start/End: Complemental strand, 35175977 - 35175862
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    |||| |||||||||||||||| |   |||||| || |||||| |  |||||  |||||||||||| ||||||||||||||    |||||||||||| |      
T  35175977 tcaatttcgtccttgaattttcagggatcggccaaattcgtctccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 35175878  T
Q  418 gtccctccgtctaaaa 433  Q
    ||||||||||| ||||    
T  35175877 gtccctccgtccaaaa 35175862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 379
Target Start/End: Complemental strand, 7051340 - 7051263
Alignment:
Q  302 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatc 379  Q
    ||||| ||||||||||| |||||||   ||||||||| ||||||| |  || |||||| ||||||||| |||||||||    
T  7051340 aaaaatgactaataccttaaattcgaatttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatc 7051263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 3e-55; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 302 - 455
Target Start/End: Complemental strand, 3152368 - 3152215
Alignment:
Q  302 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 401  Q
    ||||| |||||||||||||||||  ||||| ||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  3152368 aaaaacgactaatacctcaaatttatccttaaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttaca 3152269  T
Q  402 gacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||||||||| ||||||||||| |||| |||||||| ||||||||||||    
T  3152268 gacgtccatcaaatccgtccctccgtccaaaaggtccgttaatagtgatgatgt 3152215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 308 - 455
Target Start/End: Original strand, 44794208 - 44794354
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||| |||||||||||||||||||||||||||| |||| |||    
T  44794208 gactaatacctcaaattcgtccttgaattttgaaaa-tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagtc 44794306  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||  ||||||||||| |||| |||||||| ||||||||||||    
T  44794307 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 44794354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 314 - 455
Target Start/End: Original strand, 2660218 - 2660359
Alignment:
Q  314 tacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaa 413  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  2660218 tacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaa 2660317  T
Q  414 atcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||  ||||||||||| |||| ||| |||| ||  ||||||||    
T  2660318 attcgtccctccgtccaaaaggtctgttaataacgatgatgt 2660359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 308 - 452
Target Start/End: Complemental strand, 53190903 - 53190759
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  53190903 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 53190804  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  53190803 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 53190759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 46308807 - 46308926
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46308807 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 46308906  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  46308907 aatcaaatcagtccctccgt 46308926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 308 - 452
Target Start/End: Complemental strand, 27899225 - 27899081
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||    
T  27899225 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 27899126  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    ||| |||   ||||||||||| ||||  ||||||||| |||||||    
T  27899125 cataaaaatggtccctccgtccaaaagctccgttagtggtgatga 27899081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 38193599 - 38193480
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  38193599 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 38193500  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||||||||| |||||    
T  38193499 aatcaaatcagtccatccgt 38193480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 53094362 - 53094243
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  53094362 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 53094263  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  53094262 aatcaaatgagtccctccgt 53094243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 54900163 - 54900044
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||   | | |||    
T  54900163 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaatttacaaaatgtc 54900064  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  54900063 aatcaaatcagtccctccgt 54900044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 307 - 397
Target Start/End: Complemental strand, 41979442 - 41979352
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  41979442 ggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 308 - 425
Target Start/End: Original strand, 3150252 - 3150369
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  3150252 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 3150351  T
Q  408 catcaaatcagtccctcc 425  Q
     |||||||||||||||||    
T  3150352 aatcaaatcagtccctcc 3150369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 308 - 433
Target Start/End: Original strand, 41977750 - 41977875
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||| || | |||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  41977750 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtc 41977849  T
Q  408 catcaaatcagtccctccgtctaaaa 433  Q
    | |||||   ||||||||||| ||||    
T  41977850 cgtcaaaatggtccctccgtccaaaa 41977875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 308 - 452
Target Start/End: Complemental strand, 2226296 - 2226152
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | ||||||||||||||||||||||||     
T  2226296 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 2226197  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    |||||||    |||||||||| ||||  || |||||| |||||||    
T  2226196 catcaaaatgttccctccgtccaaaaactctgttagtggtgatga 2226152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 351 - 455
Target Start/End: Complemental strand, 19987695 - 19987591
Alignment:
Q  351 aatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgat 450  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||| ||| ||||||||||||    
T  19987695 aatttcgtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaaggtctgttagtagtgat 19987596  T
Q  451 gatgt 455  Q
    |||||    
T  19987595 gatgt 19987591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 308 - 455
Target Start/End: Original strand, 21348723 - 21348870
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||| ||||||||||||| |||||||||| || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||    
T  21348723 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 21348822  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||   ||||||||||| ||||  || |||||| ||||| ||||    
T  21348823 catcaaaatggtccctccgtccaaaagctctgttagtggtgataatgt 21348870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 38191895 - 38192014
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  38191895 gactaatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 38191994  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  38191995 aatcaaatcagtccctccgt 38192014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 53187742 - 53187861
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  53187742 gactaatacctcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 53187841  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  53187842 aatcaaatcagtccctccgt 53187861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 308 - 444
Target Start/End: Original strand, 54898437 - 54898573
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | ||||||||||||||||||||||||     
T  54898437 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 54898536  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagt 444  Q
    |||||||   ||| ||||||| ||||  |||||||||    
T  54898537 catcaaaatggtctctccgtccaaaagctccgttagt 54898573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 46310525 - 46310406
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46310525 gactaatacctcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 46310426  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||| ||||||||||||    
T  46310425 aatcaaaccagtccctccgt 46310406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 46611392 - 46611273
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||||||||||  |  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46611392 gactaatacctcaaattcgtccttgaattttgaaaaatttgtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgtc 46611293  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  46611292 aatcaaatcagtccctccgt 46611273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 455
Target Start/End: Original strand, 51684610 - 51684757
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||| |||||||||||||||||||||| ||||||| || || ||| |||||||||||| | ||||||| | ||||||| |||||||||||||||||    
T  51684610 gactaatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacgtc 51684709  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  51684710 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 51684757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 308 - 397
Target Start/End: Complemental strand, 44795979 - 44795890
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||||    
T  44795979 gactaatacctcaaattcgtccttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaattt 44795890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 307 - 455
Target Start/End: Complemental strand, 30600063 - 30599915
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    ||||||||||||||||||||||||| |||||| | |||||||| || || ||||||||||||| ||||||||| | ||||||||||||||||| ||||||    
T  30600063 ggactaatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgt 30599964  T
Q  407 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    | ||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  30599963 cgatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 30599915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 308 - 455
Target Start/End: Original strand, 17515310 - 17515457
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||| |||||||||||| |||||| ||| || ||| || ||||||||| ||||||||| | ||||||||||||||||||| |||||    
T  17515310 gactaatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 17515409  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||   ||||||| ||| |||||  |||||||| ||||||||||    
T  17515410 catcaaaatggtccctctgtccaaaatcaccgttagtggtgatgatgt 17515457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 23293314 - 23293167
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||| || ||||||||| |||||||| || || |||| || |||||||| ||||||||| | ||||||| ||||||||||| |||||    
T  23293314 gactaatacctcaaatttgttcttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtc 23293215  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||  |||||||||||| ||||  ||||||||| ||||||||||    
T  23293214 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 23293167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 308 - 423
Target Start/End: Original strand, 46609149 - 46609264
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||   | | |||    
T  46609149 gactaatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtc 46609248  T
Q  408 catcaaatcagtccct 423  Q
     |||||||||||||||    
T  46609249 aatcaaatcagtccct 46609264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 53092623 - 53092742
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||| || ||||||||||||| ||| ||||||||||||||||||| ||||||||||||||| |||||||||||   | | |||    
T  53092623 gactaatacctcaaattcgtctttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttataaaatgtc 53092722  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  53092723 aatcaaatcagtccctccgt 53092742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 310 - 455
Target Start/End: Original strand, 43765139 - 43765284
Alignment:
Q  310 ctaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 409  Q
    ||||||||||||||||||||||||||||| |||||||||  || ||||| || ||||||| ||||||||| | |||||  ||||||||||||||||||||    
T  43765139 ctaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtcca 43765238  T
Q  410 tcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||   |||||||| || ||||  ||||||||| ||||||||||    
T  43765239 tcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 43765284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 313 - 425
Target Start/End: Complemental strand, 2661992 - 2661880
Alignment:
Q  313 atacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatca 412  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||| |||||||| ||||||||||||||||||| |||||||   | | ||| ||||    
T  2661992 atacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatca 2661893  T
Q  413 aatcagtccctcc 425  Q
    |||||||||||||    
T  2661892 aatcagtccctcc 2661880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 28626411 - 28626530
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||||  ||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  28626411 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 28626510  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  28626511 aatcaaattagtccctccgt 28626530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 302 - 397
Target Start/End: Original strand, 35903819 - 35903914
Alignment:
Q  302 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| || |||||| |||||||||||| | |||||||||||||||||||||||||    
T  35903819 aaaaacgactaatacctcaaatttgtccttgaattttgaaaaatcagccaatttcatccctgaattttgcaaaatatcaaattagtccctgaattt 35903914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 7883328 - 7883447
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||| |||||| |||||||||||||||||||| |||||||||||| ||||||  |||||||||||||||| |||||||||   | |  ||    
T  7883328 gactaatacctcaatttcgtctttgaattttgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaatttacaaaatttc 7883427  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  7883428 aatcaaatcagtccctccgt 7883447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 23291570 - 23291689
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||| ||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||| ||||||||   | | |||    
T  23291570 gactaataccttaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtc 23291669  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  23291670 aatcaaatcagtccctccgt 23291689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 321 - 452
Target Start/End: Complemental strand, 35905843 - 35905712
Alignment:
Q  321 aattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtc 420  Q
    ||||| |||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||||   |||    
T  35905843 aattcatccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtc 35905744  T
Q  421 cctccgtctaaaatgtccgttagtagtgatga 452  Q
    |||||||| ||||  |||| |||| |||||||    
T  35905743 cctccgtccaaaagctccggtagtggtgatga 35905712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 46112487 - 46112606
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||   |||||||| | ||||||| | ||||||| |||||||||||||||||    
T  46112487 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacgtc 46112586  T
Q  408 catcaaatcagtccctccgt 427  Q
    |||||||   ||||||||||    
T  46112587 catcaaaatggtccctccgt 46112606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 311 - 455
Target Start/End: Original strand, 42279510 - 42279654
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    |||||||||||||||||| ||||||||| ||||||| ||  | |||||| | ||||||| | ||||||| | ||||||||||||||||||||||||| ||    
T  42279510 taatacctcaaattcgtcattgaattttcaaaaatcagctcaattcgtctcagaattttgcaaaatatctatttagtccctgaattttacagacgtctat 42279609  T
Q  411 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||   ||||||||||| ||||  || |||||| ||||||||||    
T  42279610 caaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 42279654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 611311 - 611192
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||||||||||| | | |||| ||||||||||   | | |||    
T  611311 gactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaatttacaaaatgtc 611212  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  611211 aatcaaattagtccctccgt 611192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 309 - 427
Target Start/End: Complemental strand, 2379071 - 2378953
Alignment:
Q  309 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 408  Q
    |||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| | ||||| | | ||||||| |||||||   | | |||     
T  2379071 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcaaaatagctatttagtccttgaatttacaaaatgtca 2378972  T
Q  409 atcaaatcagtccctccgt 427  Q
    |||||||||||||||||||    
T  2378971 atcaaatcagtccctccgt 2378953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 452
Target Start/End: Original strand, 2377032 - 2377173
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    |||||||||||||||||  ||||||||| |||||| | | || |||||||||||||||| | ||| ||  | |||||| |||||||||||||||||||||    
T  2377032 taatacctcaaattcgtttttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtctctgaattttacagacgtccat 2377131  T
Q  411 caaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    ||||   || |||||||||||||  ||||||||| |||||||    
T  2377132 caaaatggttcctccgtctaaaagctccgttagtggtgatga 2377173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 303 - 427
Target Start/End: Original strand, 44267976 - 44268100
Alignment:
Q  303 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 402  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| || ||| || ||||||||| ||||||| | | || |||| |||||||   |     
T  44267976 aaaatgactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaatttataaa 44268075  T
Q  403 acgtccatcaaatcagtccctccgt 427  Q
    | ||| |||||||||||||||||||    
T  44268076 atgtcaatcaaatcagtccctccgt 44268100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 23774162 - 23774268
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    ||||||||||||||||||||| |  | ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||  |    
T  23774162 tcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtccatcaaaaaa 23774261  T
Q  418 gtccctc 424  Q
    |||||||    
T  23774262 gtccctc 23774268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 30598337 - 30598456
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||| ||||||| | | || |||| |||||||   | | ||    
T  30598337 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattt-gtccctgaattttgcgaaatagctattttgtccttgaatttacaaaatgt 30598435  T
Q  407 ccatcaaatcagtccctccgt 427  Q
    | ||||||| |||||||||||    
T  30598436 caatcaaattagtccctccgt 30598456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 369
Target Start/End: Complemental strand, 7884988 - 7884927
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 369  Q
    ||||||||||||||||||||||||||||||| |||||||||| || | ||||||||||||||    
T  7884988 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttt 7884927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 427
Target Start/End: Complemental strand, 42282559 - 42282443
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    |||||||||||||||||||||||||||| ||||||| |  || |||||  ||||||||| ||||||||| | ||||||| |||||||   | | || |||    
T  42282559 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtttctgaattttgcgaaatatctatttagtccttgaatttacaaaatgttcat 42282460  T
Q  411 caaatcagtccctccgt 427  Q
     ||||||||||||||||    
T  42282459 taaatcagtccctccgt 42282443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 424
Target Start/End: Complemental strand, 51686483 - 51686367
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||| |||||| ||||||| || || ||||||||| |||||| ||||||||  | |||||||  ||||||   | | ||     
T  51686483 gactaatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagtcctcgaatttacaaaatgtt 51686384  T
Q  408 catcaaatcagtccctc 424  Q
    |||||||||||||||||    
T  51686383 catcaaatcagtccctc 51686367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 424
Target Start/End: Original strand, 48829355 - 48829472
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    |||||||||||||||||||||||||||||||| |||| || || || ||  | |||||||||| ||||||||| | |||||||  | ||||   | | ||    
T  48829355 ggactaatacctcaaattcgtccttgaattttcaaaattcagccaaatttattcctgaattttgcgaaatatctatttagtcctcggatttacaaaatgt 48829454  T
Q  407 ccatcaaatcagtccctc 424  Q
    ||||||||||||||||||    
T  48829455 ccatcaaatcagtccctc 48829472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 386 - 452
Target Start/End: Complemental strand, 7884939 - 7884873
Alignment:
Q  386 gtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    |||||||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  7884939 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttccgttagtggtgatga 7884873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 428
Target Start/End: Complemental strand, 23888886 - 23888776
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    |||||||||||| |||||||| | |  ||||| || ||||||||| |||| | ||||||||||  |||||||||||||||  || ||||||||||||       
T  23888886 tcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgtcaaacgtccatcaaaaag 23888787  T
Q  418 gtccctccgtc 428  Q
    |||||||||||    
T  23888786 gtccctccgtc 23888776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 428
Target Start/End: Complemental strand, 40509025 - 40508915
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    ||||||||||||||||||||| |    ||||| || ||||||||| |||| | ||||||||||| ||| ||| |||||||  |||||||||||||||       
T  40509025 tcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtccatcaaaaat 40508926  T
Q  418 gtccctccgtc 428  Q
    |||||||||||    
T  40508925 gtccctccgtc 40508915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 428
Target Start/End: Original strand, 48633887 - 48633997
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    ||||||||||||||||||||| |    ||||  || ||||||| | |||| | ||||||||||| |||||||||||||||  |||||||||||||||       
T  48633887 tcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 48633986  T
Q  418 gtccctccgtc 428  Q
    |||||||||||    
T  48633987 gtccctccgtc 48633997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 425
Target Start/End: Complemental strand, 54412633 - 54412519
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    ||||| ||||||||||||| |||||||| |||||| ||  || ||||||| |||||||| ||| ||||| | ||||| |||||||||   | | ||| ||    
T  54412633 taatatctcaaattcgtccgtgaattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaatttacaaaatgtcaat 54412534  T
Q  411 caaatcagtccctcc 425  Q
    |||||||||||||||    
T  54412533 caaatcagtccctcc 54412519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 455
Target Start/End: Original strand, 46197766 - 46197867
Alignment:
Q  354 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 453  Q
    |||||| ||||||||| | ||||||| | ||||| |||||||||||||||||||||| |||   |||||| |||| ||||  |||||||||  |||||||    
T  46197766 ttcgtctctgaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttccgttagtgatgatgat 46197865  T
Q  454 gt 455  Q
    ||    
T  46197866 gt 46197867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 414
Target Start/End: Complemental strand, 2977443 - 2977347
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 414  Q
    ||||||||||||||||||||| |  ||||||| || ||| ||||| |||| | ||||||||||| | ||||||| |||||  || ||||||||||||    
T  2977443 tcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatacgtccatcaaa 2977347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 428
Target Start/End: Complemental strand, 25535317 - 25535253
Alignment:
Q  364 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 428  Q
    ||||||||||||||| || ||||||||||||||| ||||||||||| |||||   ||||||||||    
T  25535317 aatttttcgaaatattaagttagtccctgaatttaacagacgtccaccaaattcatccctccgtc 25535253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 21350694 - 21350575
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||| ||| ||| ||||  ||||||||| || |||||  ||||||||| ||||||| | | || |||| |||||||   | | |||    
T  21350694 gactaatacctcaaattcatccgtgatttttttaaaatcggccaaattcgttactgaattttgcgaaatagctattttgtccttgaatttacaaaatgtc 21350595  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  21350594 aatcaaatcagtccctccgt 21350575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 428
Target Start/End: Complemental strand, 23877044 - 23876982
Alignment:
Q  366 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 428  Q
    ||||| ||||||||||||||||| |||||||| ||| |||||||||||||   ||||||||||    
T  23877044 ttttttgaaatatcaaattagtctctgaatttaacaaacgtccatcaaattcatccctccgtc 23876982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 428
Target Start/End: Complemental strand, 45898462 - 45898352
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    |||||||||||| |||||||| | |  ||| | || || ||||||||||| | ||||||||||| ||||||| |||||||  |||||||| ||||||       
T  45898462 tcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagtccttgaatttgtcagacgtctatcaaaaag 45898363  T
Q  418 gtccctccgtc 428  Q
    |||||||||||    
T  45898362 gtccctccgtc 45898352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 427
Target Start/End: Complemental strand, 17517052 - 17516943
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    ||||||||||||||||||||| |||||||||  || ||||| | |||||||| |||||||   | || |||| |||||||   | | ||| |||||||||    
T  17517052 tcaaattcgtccttgaattttcaaaaatcggtcaaattcgttcatgaattttgcgaaatagttattttgtccttgaatttacaaaatgtcaatcaaatca 17516953  T
Q  418 gtccctccgt 427  Q
    ||||||||||    
T  17516952 gtccctccgt 17516943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 455
Target Start/End: Complemental strand, 48830896 - 48830803
Alignment:
Q  362 tgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||  ||||||||| | ||||||  |||||||||| |||||||||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  48830896 tgaatttaacgaaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 48830803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 388
Target Start/End: Original strand, 600725 - 600805
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtc 388  Q
    |||||||||||||||||| |||||||||||| |||||||| | || || || | |||||||| | ||||||| | ||||||    
T  600725 gactaatacctcaaattcatccttgaattttaaaaaatcgaccaaatttgttcatgaattttacaaaatatctatttagtc 600805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 455
Target Start/End: Complemental strand, 44276265 - 44276193
Alignment:
Q  383 ttagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||| ||||||||||||||| ||||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  44276265 ttagtccttgaattttacagacgcccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 44276193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 46114195 - 46114075
Alignment:
Q  308 gactaatacctcaaattcgtccttgaatttt-gaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    ||||| |||||||||||  ||||||||||||  |||||||||| || || |||| |||||||| ||||||||| | ||||||  |||||||   | | ||    
T  46114195 gactactacctcaaatttatccttgaattttaaaaaaatcggccaaatttgtccttgaattttgcgaaatatctatttagtcattgaatttacaaaatgt 46114096  T
Q  407 ccatcaaatcagtccctccgt 427  Q
    | |||||||||||| ||||||    
T  46114095 caatcaaatcagtcactccgt 46114075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 428
Target Start/End: Complemental strand, 33113254 - 33113184
Alignment:
Q  358 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 428  Q
    ||||| |||| | ||||||||||| ||||||||| |||||  |||||||||||||||   |||||||||||    
T  33113254 tccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacgtccatcaaaaaggtccctccgtc 33113184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 41944586 - 41944666
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttt 398  Q
    |||| ||||||| |||||||| |   |||||| || ||||||||  |||||  |||||||||||| |||||||||||||||    
T  41944586 tcaatttcgtccctgaattttcagggatcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttt 41944666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 5e-54; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 6786125 - 6785978
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  6786125 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattttacagacgtc 6786026  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||||||||||||||| |||||||| ||||  |||||||||||    
T  6786025 catcaaatcagtccctccgtccaaaatgtctgttaacagtgatgatgt 6785978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 308 - 455
Target Start/End: Original strand, 37020508 - 37020655
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||||  ||||| |||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  37020508 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaattttgtccttgaattttttgaaatatcaaattagtccctgaattttgcagacgtc 37020607  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  37020608 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 37020655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 308 - 433
Target Start/End: Complemental strand, 24208186 - 24208061
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| |  ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24208186 gactaatacctcaaaatactccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtc 24208087  T
Q  408 catcaaatcagtccctccgtctaaaa 433  Q
    ||||||||||||||||||||| ||||    
T  24208086 catcaaatcagtccctccgtccaaaa 24208061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 302 - 455
Target Start/End: Complemental strand, 39664898 - 39664745
Alignment:
Q  302 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 401  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||| || |||||||| ||||||| ||||||||| | |||||||||||||||||||    
T  39664898 aaaaatgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttaca 39664799  T
Q  402 gacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  39664798 gacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 39664745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 308 - 444
Target Start/End: Original strand, 16763076 - 16763212
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  16763076 gactaatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 16763175  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagt 444  Q
    |||||||   ||||||||||| ||||| || ||||||    
T  16763176 catcaaaatggtccctccgtccaaaatctctgttagt 16763212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 303 - 427
Target Start/End: Original strand, 24205593 - 24205717
Alignment:
Q  303 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 402  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |     
T  24205593 aaaaggactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaa 24205692  T
Q  403 acgtccatcaaatcagtccctccgt 427  Q
    | ||| ||||||| |||||||||||    
T  24205693 atgtcaatcaaattagtccctccgt 24205717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 14387349 - 14387468
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  14387349 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtc 14387448  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  14387449 aatcaaataagtccctccgt 14387468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 308 - 455
Target Start/End: Original strand, 40560223 - 40560370
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||| ||||||||||| ||||||||| ||||||| || || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  40560223 gactaatacttcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 40560322  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||  |||||||||||| ||||  || |||||| ||||||||||    
T  40560323 catcaaaatagtccctccgtccaaaagttctgttagtggtgatgatgt 40560370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 308 - 455
Target Start/End: Complemental strand, 14389228 - 14389081
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||| ||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||| || | |||    
T  14389228 gactaatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtc 14389129  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||   ||||||||||| ||||  | ||||||||||||||||||    
T  14389128 catcaaaatggtccctccgtccaaaagtttcgttagtagtgatgatgt 14389081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 16764700 - 16764581
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  16764700 gactaatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 16764601  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||| ||||||||||||    
T  16764600 aatcaaaccagtccctccgt 16764581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 308 - 453
Target Start/End: Complemental strand, 44709889 - 44709744
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||||||||||||| ||||| |||| || |||| ||||||||||| ||||||| | | |||||||||||||||||||||||||    
T  44709889 gactaatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacgtc 44709790  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 453  Q
    |||||||   ||||||||||| ||||  | ||||||| ||||||||    
T  44709789 catcaaaatggtccctccgtccaaaagcttcgttagtggtgatgat 44709744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 37022274 - 37022155
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  37022274 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 37022175  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  37022174 aatcaaattagtccctccgt 37022155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 302 - 427
Target Start/End: Complemental strand, 2577575 - 2577450
Alignment:
Q  302 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 401  Q
    ||||| ||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||   |    
T  2577575 aaaaatgactaatacctcaaaatagtccttgaattttgaaaaatcgtccaatttcgtccctgaattttttgaaatatcaaattagtccctgaatttacaa 2577476  T
Q  402 gacgtccatcaaatcagtccctccgt 427  Q
     | ||| ||||||| |||||||||||    
T  2577475 aatgtcaatcaaattagtccctccgt 2577450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 308 - 452
Target Start/End: Complemental strand, 19908391 - 19908246
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaa-tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| || || ||||||||||||| ||||||||| | ||||||| ||||||||||||||||    
T  19908391 gactaatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgt 19908292  T
Q  407 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    || |||||   ||||||||||| ||||  ||||||||| |||||||    
T  19908291 ccgtcaaaatggtccctccgtccaaaagctccgttagtggtgatga 19908246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 303 - 455
Target Start/End: Original strand, 2766929 - 2767081
Alignment:
Q  303 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 402  Q
    |||| |||||||| |||||||||||||||||||||| |||||||||  ||  |||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  2766929 aaaatgactaatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacag 2767028  T
Q  403 acgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||| ||||||   ||||||| ||| ||||  ||||||||| ||||||||||    
T  2767029 acgtctatcaaaatggtccctctgtccaaaagctccgttagtggtgatgatgt 2767081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 311 - 455
Target Start/End: Original strand, 17696209 - 17696353
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    |||||||||||||||||||||||||||| |||||||||| || ||| ||||||||||||   ||||||| | ||||||||||||||||||| ||||| ||    
T  17696209 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacgtcaat 17696308  T
Q  411 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||   ||| ||||||| ||||  ||||||||| ||||||||||    
T  17696309 caaaatggtcactccgtccaaaagctccgttagtggtgatgatgt 17696353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 40561967 - 40561848
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||  |||||| |||||||||||||||||||   | | |||    
T  40561967 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaatttacaaaatgtc 40561868  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||| ||||||||||    
T  40561867 aatcaaatcggtccctccgt 40561848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 6783364 - 6783453
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 397  Q
    ||||||||||||||| | ||||||||||||| |||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  6783364 gactaatacctcaaaatagtccttgaattttaaaaaatcggtcaatttcgtccctgaattattcaaaatatcaaattagtccctgaattt 6783453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 312 - 455
Target Start/End: Complemental strand, 42519346 - 42519202
Alignment:
Q  312 aatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttt-cgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    ||||||||||||||||||||||||||| |||||| |   || || |||| ||||||||| | ||||||| | ||||||||||||||||||||||||||||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccat 42519247  T
Q  411 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    ||||   |||||||| || ||||  ||||||||| ||||||||||    
T  42519246 caaaatggtccctccatccaaaagctccgttagtggtgatgatgt 42519202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 307 - 427
Target Start/End: Original strand, 39663153 - 39663273
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    |||||||||||| ||||||||||||||||||| |||||||||  || |||||||||||||||| | ||||| | | |||||||||||||||   | | ||    
T  39663153 ggactaatacctaaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgt 39663252  T
Q  407 ccatcaaatcagtccctccgt 427  Q
    | |||||||||||||||||||    
T  39663253 caatcaaatcagtccctccgt 39663273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 16376736 - 16376855
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||||||||| ||||||||| |||||||||  || |||||||||||||||| ||||||| | | |||||||||||||||   | |  ||    
T  16376736 gactaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaatttacaaaatatc 16376835  T
Q  408 catcaaatcagtccctccgt 427  Q
     |||||||||||||||||||    
T  16376836 aatcaaatcagtccctccgt 16376855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 420
Target Start/End: Original strand, 19581414 - 19581526
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||||||||||||||||||| |||||| ||||||| || || || ||||||||||||| ||||||||| | |||||||  ||||||  || | |||    
T  19581414 gactaatacctcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaatgtc 19581513  T
Q  408 catcaaatcagtc 420  Q
    |||||||||||||    
T  19581514 catcaaatcagtc 19581526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 19906685 - 19906801
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    |||||||| ||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | ||||||||  |||||   | | ||| ||    
T  19906685 taataccttaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccataatttacaaaatgtcaat 19906784  T
Q  411 caaatcagtccctccgt 427  Q
    |||||||||||||||||    
T  19906785 caaatcagtccctccgt 19906801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 307 - 414
Target Start/End: Original strand, 6797506 - 6797613
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 406  Q
    |||||||||||| |||||| |  ||||||||| |||||| ||| || ||||| |||||||||| ||||||||| | ||||||||| ||||||||||||||    
T  6797506 ggactaataccttaaattcatatttgaattttaaaaaattggctaaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgt 6797605  T
Q  407 ccatcaaa 414  Q
    | ||||||    
T  6797606 ctatcaaa 6797613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 308 - 455
Target Start/End: Original strand, 39455169 - 39455316
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    |||||||| |||||||| ||||||||||||| |||||||||  || |||   |||||||||| | ||||||| | ||||||| |||||||||||||||||    
T  39455169 gactaatatctcaaatttgtccttgaattttaaaaaatcggttaaattcagtcctgaattttgcaaaatatctatttagtccatgaattttacagacgtc 39455268  T
Q  408 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 455  Q
    |||||||   ||| ||||||  ||||  ||||||||| | ||||||||    
T  39455269 catcaaaatggtctctccgttcaaaagctccgttagtggcgatgatgt 39455316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 34400313 - 34400383
Alignment:
Q  307 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaata 377  Q
    ||||||||||||||||||| |||||||||||| |||||||||| || ||| |||||||||||| |||||||    
T  34400313 ggactaatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaata 34400383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 357 - 452
Target Start/End: Complemental strand, 16377292 - 16377197
Alignment:
Q  357 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    ||||||||||||| | ||||||| | ||||||| ||||||||||| ||||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  16377292 gtccctgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 16377197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 427
Target Start/End: Complemental strand, 39456875 - 39456750
Alignment:
Q  302 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 401  Q
    ||||| ||||||||| |||||||| |||||||||||| |||||| ||  || ||||||| |||||||| | ||||| | | |||||||||||||||   |    
T  39456875 aaaaacgactaatacttcaaattcatccttgaattttaaaaaattggttaaattcgtccatgaattttgcaaaatagctatttagtccctgaatttataa 39456776  T
Q  402 gacgtccatcaaatcagtccctccgt 427  Q
     | ||| ||||||||||||| |||||    
T  39456775 aatgtcaatcaaatcagtccatccgt 39456750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 444
Target Start/End: Complemental strand, 11023100 - 11023001
Alignment:
Q  345 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 444  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| || ||||||||||| |||| ||||||||||    
T  11023100 tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaattccgtccctccgtccaaaaggtccgttagt 11023001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 42517558 - 42517599
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggc 349  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  42517558 gactaatacctcaaattcgtccttgaatttttaaaaatcggc 42517599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 414
Target Start/End: Original strand, 37417287 - 37417379
Alignment:
Q  322 attcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 414  Q
    ||||||||||||||||| |    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  37417287 attcgtccttgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 37417379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 369
Target Start/End: Complemental strand, 6799494 - 6799436
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 369  Q
    ||||| |||||||||||||||||||||| |||||||||  || ||||||| ||||||||    
T  6799494 taatatctcaaattcgtccttgaatttttaaaaatcggacaaattcgtccatgaatttt 6799436  T

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Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 428
Target Start/End: Complemental strand, 11315449 - 11315339
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    |||| ||||||||| |||||| |  ||||||| || ||||| ||  |||||  |||||||||||| |||| |||||||||  |||||||||||||||       
T  11315449 tcaacttcgtccttaaatttttatgaatcggccaaattcgttccctaatttaacgaaatatcaaaatagttcctgaatttgtcagacgtccatcaaaatg 11315350  T
Q  418 gtccctccgtc 428  Q
    |||||||||||    
T  11315349 gtccctccgtc 11315339  T

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Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 428
Target Start/End: Complemental strand, 26584895 - 26584821
Alignment:
Q  354 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 428  Q
    ||||||||| || ||||| ||||||||||||| ||||| ||||| | |||||||||||||||   ||||||||||    
T  26584895 ttcgtccctcaagttttcaaaatatcaaattaatccctcaatttaatagacgtccatcaaattcatccctccgtc 26584821  T

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Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 415
Target Start/End: Original strand, 4046352 - 4046403
Alignment:
Q  364 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 415  Q
    ||||||| ||||||||||||||||| || ||||| |||| ||||||||||||    
T  4046352 aattttttgaaatatcaaattagtctctaaatttaacagtcgtccatcaaat 4046403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 428
Target Start/End: Complemental strand, 29909735 - 29909664
Alignment:
Q  357 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 428  Q
    |||||| |||| | ||||||||||| ||||||||| |||||  |||||||||||||||   |||||||||||    
T  29909735 gtccctcaattatgcgaaatatcaatttagtcccttaatttgtcagacgtccatcaaaaaggtccctccgtc 29909664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 361455 - 361561
Alignment:
Q  318 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 417  Q
    |||| |||||||||||||||| |  ||||||| ||  || ||||| |||| |  |||||||||||||||||  ||||||   |||||||||||||| | |    
T  361455 tcaacttcgtccttgaattttcatgaatcggccaaaatcatccctcaattatgtgaaatatcaaattagtcattgaattcgtcagacgtccatcaattta 361554  T
Q  418 gtccctc 424  Q
    |||||||    
T  361555 gtccctc 361561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 428
Target Start/End: Original strand, 37645490 - 37645607
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    ||||||| ||| |||||||||||||||| ||||||| |   | ||||||| | ||||||  |||||||| | ||||||| |||||||| |||| ||  ||    
T  37645490 taataccccaacttcgtccttgaatttttaaaaatcagtcgaattcgtccttaaattttaggaaatatctatttagtccttgaattttgcagatgtttat 37645589  T
Q  411 caaatcagtccctccgtc 428  Q
    ||||   |||||||||||    
T  37645590 caaaattgtccctccgtc 37645607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 414
Target Start/End: Original strand, 15432378 - 15432434
Alignment:
Q  358 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 414  Q
    ||||| |||| | ||||||||||| |||||| ||||||||  |||||||||||||||    
T  15432378 tccctcaattatgcgaaatatcaatttagtctctgaatttgtcagacgtccatcaaa 15432434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 982 - 1101
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  982 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 1081  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  1082 aatcaaattagtccctccgt 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 54347 - 54228
Alignment:
Q  308 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 407  Q
    ||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  54347 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 54248  T
Q  408 catcaaatcagtccctccgt 427  Q
     ||||||| |||||||||||    
T  54247 aatcaaattagtccctccgt 54228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 452
Target Start/End: Original strand, 1266 - 1407
Alignment:
Q  311 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 410  Q
    ||||||||||||| |||||||||||||| |||||| ||  || ||||||| ||||||||  |||||||| | ||||||||||||||||||||||||||||    
T  1266 taatacctcaaatccgtccttgaattttaaaaaattggttaaattcgtccatgaattttatgaaatatctatttagtccctgaattttacagacgtccat 1365  T
Q  411 caaatcagtccctccgtctaaaatgtccgttagtagtgatga 452  Q
    ||||   ||||||||||| ||||  ||||||||| |||||||    
T  1366 caaaatggtccctccgtccaaaagctccgttagtggtgatga 1407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 427
Target Start/End: Complemental strand, 1650 - 1525
Alignment:
Q  302 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 401  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||  || ||||||||||||||||   ||||| ||| |||||||||||||||   |    
T  1650 aaaaaagactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaatttacaa 1551  T
Q  402 gacgtccatcaaatcagtccctccgt 427  Q
     | |||  ||||||||||||||||||    
T  1550 aatgtcattcaaatcagtccctccgt 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 399
Target Start/End: Original strand, 8264 - 8353
Alignment:
Q  310 ctaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 399  Q
    ||||||||||||||||||||||||||||| |||||| ||| || ||||| | |||||||| | ||||||| | |||||||||||||||||    
T  8264 ctaatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtccctgaatttta 8353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 315 - 379
Target Start/End: Original strand, 436272 - 436336
Alignment:
Q  315 acctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatc 379  Q
    ||||||||||||| |||||||||| ||||||| || || ||| ||| | |||||| |||||||||    
T  436272 acctcaaattcgttcttgaattttcaaaaatcagccaaattcatccataaattttgcgaaatatc 436336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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