View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13034_high_21 (Length: 259)
Name: NF13034_high_21
Description: NF13034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13034_high_21 |
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Alignment Details
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 54616677 - 54616917
Alignment:
| Q |
18 |
tgtagcagcaaattctaccgtctacaatatgggaaggtgatttccaaaacctatacaacttcaattttgatcaagcaagagcaacatcttttcctactca |
117 |
Q |
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| T |
54616677 |
tgtagcagcaaattctaccgtctacaatatgggaaggtgatttccaaaacctatacaacttcaattttgatcaagcaagagcaacatcttttcctactca |
54616776 |
T |
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| Q |
118 |
atctcagttatttacaggtagttaaaatatttgtctagtcataaaatcactttttaattagctttgtatctttaaagtagaaagtagaggtaaaagtgag |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54616777 |
atctcagttatttacaggtagttaaaatatttgtctagtcataaaatcactttttaattagctttgtatctttaaagtagaaagtagaggtaaaagtgag |
54616876 |
T |
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| Q |
218 |
tgggtttaatagatgatggagacgttacatccccttcattt |
258 |
Q |
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| T |
54616877 |
tgggtttaatagatgatggagacgttacatccccttcattt |
54616917 |
T |
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