View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13034_low_30 (Length: 203)
Name: NF13034_low_30
Description: NF13034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13034_low_30 |
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Alignment Details
Target: chr8 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 185
Target Start/End: Original strand, 40494701 - 40494865
Alignment:
| Q |
18 |
atgcaagagtaagaaatatgataagaaaggtgtatccatccataattaaattaaatgttaagaaaccttaacatccaaggtaataaacatagttcactat |
117 |
Q |
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| T |
40494701 |
atgcaagagtgagaaatatgataagaaaggtgtatcc----ataattaaattaaatgttaagaaaccttaacatccaaggtaataaacatagttcactat |
40494796 |
T |
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| Q |
118 |
atgtcacgtgtaactgtggtcatgtacaaccaaacgaaaac-aagtaaaaagtaaacacagtaaagtat |
185 |
Q |
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| T |
40494797 |
atgtcacgtgtaactgtggtcatgtacaaccaaacgaaaacaaagtaaaaagtaaacacagtaaagtat |
40494865 |
T |
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