View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13036_low_31 (Length: 221)
Name: NF13036_low_31
Description: NF13036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13036_low_31 |
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Alignment Details
Target: chr6 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 17 - 203
Target Start/End: Original strand, 31265041 - 31265227
Alignment:
| Q |
17 |
attaaccagataaaaagtgcatttttcaactattttacaaatttgtcaccatttaatcttcagtttttagtttgtctctatcactcttttttctcctact |
116 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31265041 |
attaactagataaaaagtgcatttttcaactattttacaaatttgtcaccatttaatcttcagtttttagtttgtctctatcactcttttttctcctact |
31265140 |
T |
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| Q |
117 |
gtatcttcaataagttcgacataatggagaaagccttacttcgcctaagattggagaacaatattatggccataaggagcgtcttat |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
31265141 |
gtatcttcaataagttcgacataatggagaaagccttacttcgcctaagattggagaacaatattatggccataaggagcgtattat |
31265227 |
T |
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