View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13037_high_13 (Length: 456)
Name: NF13037_high_13
Description: NF13037
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13037_high_13 |
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Alignment Details
Target: chr4 (Bit Score: 423; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 12 - 442
Target Start/End: Original strand, 33824402 - 33824832
Alignment:
| Q |
12 |
cgaagaatattcaacaataagcatcaaaatctgtgtagcgcatgagctaatttaaccatggatccaagaatttccttctccaatgattttgttgttagcc |
111 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33824402 |
cgaacaatattcaacaataagcatcaaaatctgtgtagcgcatgagctaatttaaccatggatccaagaatttccttctccaatgattttgttgttagcc |
33824501 |
T |
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| Q |
112 |
aacaagcaatcaaacatgaaaacatatacagagaagctcctgtctcttcggatttcgaattctctgtcaaaaactattctatgatatcagcagatcaagc |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33824502 |
aacaagcaatcaaacatgaaaacatatacagagaagctcctgtctcttcggatttcgaattctctgtcaaaaactattctatgatatcagcagatcaagc |
33824601 |
T |
|
| Q |
212 |
cttttttaagggcatgttgttacctctcagtagtgaaggttccaagaaggtgactataagagatgaactacttaatgatgatgattcaccaaaatggcca |
311 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33824602 |
cttttttaagggcatgttgttacctctcagtagtgaaggttccaagaaggtgactataagagatgaactacttaatgatgatgattcaccaaaatggcca |
33824701 |
T |
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| Q |
312 |
aagagtttaagcaggtggaaagagcgattaggcctaaagagatcaagtgcatctaagaaagacaaggagaaacaaaaaatgcagaaatctgctgctaacc |
411 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
33824702 |
aagagtttaagcaggtggaaagagcgattaggcctaaagagatcaagtgcatctaagaaagacaaggagaaacaaaaaatgcagaagtctgctgctaacc |
33824801 |
T |
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| Q |
412 |
aaacagtgcctagttttggacaaggagaaac |
442 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
33824802 |
aaacagtgcctagttttggacaaggagaaac |
33824832 |
T |
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