View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13037_low_39 (Length: 281)
Name: NF13037_low_39
Description: NF13037
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13037_low_39 |
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Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 9 - 264
Target Start/End: Original strand, 5061884 - 5062139
Alignment:
| Q |
9 |
gaagaaaataataagcatggtaattaaagaaattgatatcaaacaattatagttttccattggtgtatacgagttttcaatgacaactgtaaaatatata |
108 |
Q |
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| T |
5061884 |
gaagaaaataataagcatggtaattaaagaaattgatatccaacaattatagttttccattggtgtatgcaagttttcaatgacaattgtaaaatatata |
5061983 |
T |
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| Q |
109 |
ttttttaaactaaaagaggttgatgaccactctaacatagtgctaataattattaacttaattaactttgatcatttcaaaatataatcaacctttttta |
208 |
Q |
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| T |
5061984 |
ttttttaaactaaaagaggttgatgaccactctaacatagtgctaataattattaacttaattaactttgatcatttcaaaatataatcaacctttttta |
5062083 |
T |
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| Q |
209 |
gtaaacatatttttaagaatgtctttcttttactcaaacaagaatatgtctttttt |
264 |
Q |
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| T |
5062084 |
gtaaacatatttttaagaatgtctttcttttactcaaacaagaatatgtctttttt |
5062139 |
T |
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