View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13037_low_4 (Length: 619)
Name: NF13037_low_4
Description: NF13037
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13037_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 570; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 570; E-Value: 0
Query Start/End: Original strand, 7 - 600
Target Start/End: Original strand, 53426418 - 53427011
Alignment:
| Q |
7 |
tcgaagaaaatattgaagcactttctctcagaccacacccataagagcattctgtttatgcatcatttagtacttctctctgaataagttatccttagtc |
106 |
Q |
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| T |
53426418 |
tcgaagaaaatattgaagcactttctctcagaccacacccataagagcattctgtttatgcatcatttagtacttctctctgaataaattatccttagtc |
53426517 |
T |
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| Q |
107 |
ataatcatattttgaaataaccgccacgccaacactgccaccttcaattggcatttcaatatcaatttcacatgatatatcctcctcattacattaagaa |
206 |
Q |
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| T |
53426518 |
ataatcatattttgaaataaccgccacgccaacactgccaccttcaattggcatttcaatatcaatttcacatgatatatcctcctcattacattaagaa |
53426617 |
T |
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| Q |
207 |
gaatgcagcatacatctacatatattgtgcttatcaaaaacttaattatctcagttccaattctgatatgaatagcagtctccatcactgccactggttc |
306 |
Q |
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| T |
53426618 |
gaatgcaacatacatctacatatattgtgcttatcaaaaacttaattatctcagttccaattctgatatgaatagcagtctccatcactgccactggttc |
53426717 |
T |
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| Q |
307 |
ctatttcttagtgcattgtcaagaactttcagcatactcagcatggctgtattatcagttttctgtgagttttttctttctcaaacttgaattggtttat |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
53426718 |
ctatttcttagtgcattgtcaagaactttcagcatactcagcatggctgtattatcagctttctgtgagttttttctttctcaaacttgaattggtttat |
53426817 |
T |
|
| Q |
407 |
tcattcatacaccaagcctagatcttaattgaccctcattggaaggagtcataggtgaatatttggacatgcataatttgttttttctttatatcctgat |
506 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
53426818 |
tcattcatacaccaagcctagatcttaattgaccctcattggaaggagtcataggtgaatatttggacatgcataatttgttttttctttaaatcctgat |
53426917 |
T |
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| Q |
507 |
atagattctttaccaaaactaatgagcttatgttcacaaaaatgacaaatttactatttcattttctcacgagatatgtgcagcatattgtcca |
600 |
Q |
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| T |
53426918 |
atagattctttaccaaaactaatgagcttatgttcacaaaaatgacaaatttactatttcattttctaacaagatatgtgcagcatattgtcca |
53427011 |
T |
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