View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13038_low_32 (Length: 248)
Name: NF13038_low_32
Description: NF13038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13038_low_32 |
 |  |
|
| [»] scaffold0257 (1 HSPs) |
 |  |  |
|
| [»] scaffold0043 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 18)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 9 - 233
Target Start/End: Original strand, 8539204 - 8539428
Alignment:
| Q |
9 |
acatcatcatttagaaaagctgaacaaagggtgggaaagaagagagttcaacttcatgaaaatgaaaagggtgacaaggtaacttaagaaaataaaactg |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8539204 |
acatcatcatttagaaaagctgaacaaagggtgggaaagaagagagttcaacttcatgaaaatgaaaagggtgacaaggtaacttaagaaaataaaactg |
8539303 |
T |
 |
| Q |
109 |
atccaaggattcttcaccttgattaatattagtgttactagtttcctgccaaagtttaacatcaacatcttgagtggtaacatcaccatcttcctacaaa |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8539304 |
atccaaggattcttcaccttgattaatattagtgttactagtttcctgccaaagtttaacatcaacatcttgagtggtaacatcaccatcttcctacaaa |
8539403 |
T |
 |
| Q |
209 |
attcatataaaagaatgatattttt |
233 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
8539404 |
attcatataaaagaatgatattttt |
8539428 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 11 - 230
Target Start/End: Complemental strand, 27920436 - 27920218
Alignment:
| Q |
11 |
atcatcatttagaaaagctgaacaaagggtgggaaagaagagagttcaacttcatgaaaatgaaaagggtgacaaggtaa---cttaagaaaataaaact |
107 |
Q |
| |
|
||||||||||||| || ||| |||| ||||||||||||||||||| ||||||| ||||||||||| ||| |||||| |||| ||||| || ||| |
|
|
| T |
27920436 |
atcatcatttagagaaactgtccaaaaggtgggaaagaagagagttaaacttca---aaatgaaaagg-tgatgaggtaattgcttatgaaaacaacact |
27920341 |
T |
 |
| Q |
108 |
gatccaaggattcttcaccttgattaatattagtgttactagtttcctgccaaagtttaacatcaacatcttgagtggtaacatcaccatcttcctacaa |
207 |
Q |
| |
|
|||||| || | ||||||||||| | |||||||||||||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
27920340 |
aatccaaagagttttcaccttgatcatcattagtgttactagtttcctgccagattttatcatcaacatattgagtggtaacatcaccatcttcctacaa |
27920241 |
T |
 |
| Q |
208 |
aattcatataaaagaatgatatt |
230 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
27920240 |
aattcatataaaagaatgatatt |
27920218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 46 - 230
Target Start/End: Complemental strand, 27954483 - 27954303
Alignment:
| Q |
46 |
agaagagagttcaacttcatgaaaatgaaaagggtgacaaggtaacttaagaaaataaaactgatccaaggattcttcaccttgattaatattagtgtta |
145 |
Q |
| |
|
||||||||||| ||||||| ||||||||||| ||| |||||||||| ||||| || ||| |||||| || | ||||||||||| | |||||||||| |
|
|
| T |
27954483 |
agaagagagttaaacttca---aaatgaaaagg-tgatgaggtaacttatgaaaacaacactaatccaaagagttttcaccttgatcatcattagtgtta |
27954388 |
T |
 |
| Q |
146 |
ctagtttcctgccaaagtttaacatcaacatcttgagtggtaacatcaccatcttcctacaaaattcatataaaagaatgatatt |
230 |
Q |
| |
|
|||||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27954387 |
ctagtttcctgccagattttatcatcaacatattgagtggtaacatcaccatcttcctacaaaattcatataaaagaatgatatt |
27954303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 185
Target Start/End: Original strand, 17744443 - 17744615
Alignment:
| Q |
10 |
catcatcatttagaaaagctgaacaaagggtgggaaagaagagagttcaacttcatgaaaatgaaaagggtgacaaggtaacttaagaaaataaaactga |
109 |
Q |
| |
|
|||||||||||||| || ||| |||||||||| |||||||||||||||||||||| |||||||||| | || ||||||||||||||||||||| || |
|
|
| T |
17744443 |
catcatcatttagagaaactggacaaagggtgagaaagaagagagttcaacttca---aaatgaaaagagcgatgaggtaacttaagaaaataaaatcga |
17744539 |
T |
 |
| Q |
110 |
tccaaggattcttcaccttgattaatattagtgttactagtttcctgccaaagtttaacatcaacatcttgagtgg |
185 |
Q |
| |
|
||||| |||| || |||||| | | |||||| || |||||||||||||| | || |||||||||||||||||||| |
|
|
| T |
17744540 |
tccaaagattttttaccttggtcatcattagtctttctagtttcctgccagatttcaacatcaacatcttgagtgg |
17744615 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 185
Target Start/End: Original strand, 19045763 - 19045935
Alignment:
| Q |
10 |
catcatcatttagaaaagctgaacaaagggtgggaaagaagagagttcaacttcatgaaaatgaaaagggtgacaaggtaacttaagaaaataaaactga |
109 |
Q |
| |
|
|||||||||||||| || ||| |||||||||| |||||||||||||||||||||| |||||||||| | || ||||||||||||||||||||| || |
|
|
| T |
19045763 |
catcatcatttagagaaactggacaaagggtgagaaagaagagagttcaacttca---aaatgaaaagagcgatgaggtaacttaagaaaataaaatcga |
19045859 |
T |
 |
| Q |
110 |
tccaaggattcttcaccttgattaatattagtgttactagtttcctgccaaagtttaacatcaacatcttgagtgg |
185 |
Q |
| |
|
||||| |||| || |||||| | | |||||| || |||||||||||||| | || |||||||||||||||||||| |
|
|
| T |
19045860 |
tccaaagattttttaccttggtcatcattagtctttctagtttcctgccagatttcaacatcaacatcttgagtgg |
19045935 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 28151841 - 28151670
Alignment:
| Q |
11 |
atcatcatttagaaaagctgaacaaagggtgggaaagaagagagttcaacttcatgaaaatgaaaagggtgacaaggtaacttaagaaaataaaactgat |
110 |
Q |
| |
|
||||||||||||| || |||| |||| | ||||||| ||||||| | ||||||| |||| ||||||| || ||||||||||||||||||||| ||| |
|
|
| T |
28151841 |
atcatcatttagagaaactga-caaaagatgggaaacaagagagctaaacttca---aaataaaaagggcgatgaggtaacttaagaaaataaaagcgat |
28151746 |
T |
 |
| Q |
111 |
ccaaggattcttcaccttgattaatattagtgttactagtttcctgccaaagtttaacatcaacatcttgagtggt |
186 |
Q |
| |
|
|||| |||||||||||||||| | |||||||||||||||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
28151745 |
ccaaagattcttcaccttgatcatcattagtgttactagtttcctgccagatttcaacatcaacatcttgagtggt |
28151670 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 11421180 - 11421007
Alignment:
| Q |
10 |
catcatcatttagaaaagctgaacaaagggtgggaaagaagagagttcaacttcatgaaaatgaaaagggtgacaaggtaacttaagaaaataaaactga |
109 |
Q |
| |
|
|||||||||||||| | |||| |||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
11421180 |
catcatcatttagagcaactga-caaacagtgggaaagaagagagttcaacttct---aaatgaaaagggtgatgtcgtaacttaagaaaataaaactga |
11421085 |
T |
 |
| Q |
110 |
tccaaggattcttcaccttgattaatattagtgttactagtttcctgccaaagtttaacatcaacatcttgagtggta |
187 |
Q |
| |
|
||||| || || |||||||||| | ||||| |||||||||||||| || | ||||||||||||||||||| ||||| |
|
|
| T |
11421084 |
tccaaagagtcatcaccttgatcatcattagccttactagtttcctgacagattttaacatcaacatcttgaatggta |
11421007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 157
Target Start/End: Complemental strand, 28162069 - 28161925
Alignment:
| Q |
10 |
catcatcatttagaaaagctgaacaaagggtgggaaagaagagagttcaacttcatgaaaatgaaaagggtgacaaggtaacttaagaaaataaaactga |
109 |
Q |
| |
|
|||| ||||||||| || ||||||||| |||| || |||||||| || ||||||| ||||||||||||||| || |||||||||||||||||| ||| |
|
|
| T |
28162069 |
catcgtcatttagagaaactgaacaaaaggtgtgagagaagagatttaaacttca---aaatgaaaagggtgatgagataacttaagaaaataaaattga |
28161973 |
T |
 |
| Q |
110 |
tccaaggattcttcaccttgattaatattagtgttactagtttcctgc |
157 |
Q |
| |
|
||||| || ||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
28161972 |
tccaaagagtcttcaccttgatcatcattagtgttactagtttcctgc |
28161925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 157
Target Start/End: Complemental strand, 28186112 - 28185968
Alignment:
| Q |
10 |
catcatcatttagaaaagctgaacaaagggtgggaaagaagagagttcaacttcatgaaaatgaaaagggtgacaaggtaacttaagaaaataaaactga |
109 |
Q |
| |
|
|||||||||||||| || ||||||||| |||| || |||||||| || ||||||| ||||||||||||||| || |||||||||||||||||| ||| |
|
|
| T |
28186112 |
catcatcatttagagaaactgaacaaaaggtgtgagagaagagatttaaacttca---aaatgaaaagggtgatgagataacttaagaaaataaaattga |
28186016 |
T |
 |
| Q |
110 |
tccaaggattcttcaccttgattaatattagtgttactagtttcctgc |
157 |
Q |
| |
|
||||| || ||||||||||||| | || ||||||||||||||||||| |
|
|
| T |
28186015 |
tccaaagagtcttcaccttgatcatcatcagtgttactagtttcctgc |
28185968 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 188
Target Start/End: Complemental strand, 28150160 - 28149985
Alignment:
| Q |
10 |
catcatcatttagaaaagctgaacaaagggtgggaaagaagagagttcaacttcatgaaaatgaaaagggtgacaaggtaacttaagaaaataaaactga |
109 |
Q |
| |
|
|||| ||||||||| || ||||||||| |||| || |||||||| || ||||||| ||||||||||||||| || |||||||||||||||||| ||| |
|
|
| T |
28150160 |
catcctcatttagagaaactgaacaaaaggtgtgagagaagagatttaaacttca---aaatgaaaagggtgatgagataacttaagaaaataaaattga |
28150064 |
T |
 |
| Q |
110 |
tccaaggattcttcaccttgattaatattagtgttactagtttcctgccaaagtttaacatcaacatcttgagtggtaa |
188 |
Q |
| |
|
||| | || ||||||||||||| | |||||||||||||||||||||| | ||||||| ||| ||||||||||||| |
|
|
| T |
28150063 |
tcctaagactcttcaccttgatcatcattagtgttactagtttcctgcaagttattaacatgaacttcttgagtggtaa |
28149985 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 28037631 - 28037455
Alignment:
| Q |
11 |
atcatcatttagaaaagctgaacaaagggtgggaaagaagagagttcaacttcatgaaaatgaaaagggtgacaaggtaacttaagaaaataaaactgat |
110 |
Q |
| |
|
|||||||||| || || ||||||| | ||||| ||||||| ||||| ||||||| ||||||||||||||| ||||||||| ||||||||| |||||| |
|
|
| T |
28037631 |
atcatcatttggataaactgaacagaaggtggaaaagaagcgagttaaacttca---aaatgaaaagggtgatgaggtaactttagaaaataacactgat |
28037535 |
T |
 |
| Q |
111 |
ccaaggattcttcaccttgattaatattagtgttactagtttcctgccaaagtttaacatcaacatcttgagtggtaaca |
190 |
Q |
| |
|
|||| || |||| ||||||| | |||||||||||||||||| |||| ||| | ||||||||||| |||||||||| |
|
|
| T |
28037534 |
ccaaagagtctttaccttgaccatcattagtgttactagtttcgcgccagtttttgagatcaacatcttcagtggtaaca |
28037455 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 188
Target Start/End: Original strand, 27458794 - 27458965
Alignment:
| Q |
10 |
catcatcatttagaaaagctgaacaaagggtgggaaagaagagagttcaacttcatgaaaatgaaaagggtgacaaggtaacttaagaaaataaaactga |
109 |
Q |
| |
|
|||||||||||||| || ||||||||| || | ||||||||| ||| ||||||| ||||||||||||||| ||| ||||| || || | | ||| |
|
|
| T |
27458794 |
catcatcatttagagaaactgaacaaaaagttgcaaagaagagggttaaacttca---aaatgaaaagggtgataagataact----aatatcagattga |
27458886 |
T |
 |
| Q |
110 |
tccaaggattcttcaccttgattaatattagtgttactagtttcctgccaaagtttaacatcaacatcttgagtggtaa |
188 |
Q |
| |
|
||||| || ||||||||||||| | ||||| || |||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
27458887 |
tccaaagagtcttcaccttgatcatccttagtcttgctagtttcctgccagattttaacatcaacatcttgagtggtaa |
27458965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 28479813 - 28479930
Alignment:
| Q |
11 |
atcatcatttagaaaagctgaacaaagggtgggaaagaagagagttcaacttcatgaaaatgaaaagggtgacaaggtaacttaagaaaataaaactgat |
110 |
Q |
| |
|
||||||||||| | || |||| |||| |||| || |||||||| || ||||||| ||||| ||||||||| |||||| |||||||||||||| |||| |
|
|
| T |
28479813 |
atcatcatttacagaaactgagcaaaaggtgtgagagaagagaattaaacttca---aaatgcaaagggtgatgaggtaaattaagaaaataaaattgat |
28479909 |
T |
 |
| Q |
111 |
ccaaggattcttcaccttgat |
131 |
Q |
| |
|
|||| || ||||||||||||| |
|
|
| T |
28479910 |
ccaaagagtcttcaccttgat |
28479930 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 28508996 - 28509113
Alignment:
| Q |
11 |
atcatcatttagaaaagctgaacaaagggtgggaaagaagagagttcaacttcatgaaaatgaaaagggtgacaaggtaacttaagaaaataaaactgat |
110 |
Q |
| |
|
||||||||||| | || |||| |||| |||| || |||||||| || ||||||| ||||| ||||||||| |||||| |||||||||||||| |||| |
|
|
| T |
28508996 |
atcatcatttacagaaactgagcaaaaggtgtgagagaagagaattaaacttca---aaatgcaaagggtgatgaggtaaattaagaaaataaaattgat |
28509092 |
T |
 |
| Q |
111 |
ccaaggattcttcaccttgat |
131 |
Q |
| |
|
|||| || ||||||||||||| |
|
|
| T |
28509093 |
ccaaagagtcttcaccttgat |
28509113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 183
Target Start/End: Complemental strand, 27776634 - 27776545
Alignment:
| Q |
94 |
aagaaaataaaactgatccaaggattcttcaccttgattaatattagtgttactagtttcctgccaaagtttaacatcaacatcttgagt |
183 |
Q |
| |
|
|||||||||||| |||||||| || | ||||||||||| | |||||| ||||||||||||||| | || |||||||||||||||||| |
|
|
| T |
27776634 |
aagaaaataaaattgatccaaagagttttcaccttgatgatcattagtcttactagtttcctgcaagttttcaacatcaacatcttgagt |
27776545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 139
Target Start/End: Complemental strand, 27378598 - 27378544
Alignment:
| Q |
85 |
aggtaacttaagaaaataaaactgatccaaggattcttcaccttgattaatatta |
139 |
Q |
| |
|
||||||| ||||||||||||| |||||||| | ||||||||||||||| ||||| |
|
|
| T |
27378598 |
aggtaacataagaaaataaaattgatccaaaaagtcttcaccttgattattatta |
27378544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 229
Target Start/End: Complemental strand, 28151620 - 28151582
Alignment:
| Q |
191 |
tcaccatcttcctacaaaattcatataaaagaatgatat |
229 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
28151620 |
tcaccttcttcctacaaaattcaaataaaagaatgatat |
28151582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 27459011 - 27459051
Alignment:
| Q |
189 |
catcaccatcttcctacaaaattcatataaaagaatgatat |
229 |
Q |
| |
|
|||| ||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
27459011 |
catcgccatcgtcctacaaaattcaaataaaagaatgatat |
27459051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0257 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0257
Description:
Target: scaffold0257; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 19265 - 19095
Alignment:
| Q |
15 |
tcatttagaaaagctgaacaaagggtgggaaagaagagagttcaacttcatgaaaatgaaaagggtgacaaggtaacttaagaaaataaaactgatccaa |
114 |
Q |
| |
|
||||||||| || ||||||||| |||| || ||||||||||| || |||| ||||||||||||||| ||||||||||||||||||| | |||||||| |
|
|
| T |
19265 |
tcatttagagaaactgaacaaaaggtgtgagagaagagagttaaatttca---aaatgaaaagggtgatgaggtaacttaagaaaataatattgatccaa |
19169 |
T |
 |
| Q |
115 |
ggattcttcaccttgattaatattagtgttactagtttcctgccaaagtttaacatcaacatcttgagtggtaa |
188 |
Q |
| |
|
|| ||||||||||||| | | || ||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
19168 |
agagtcttcaccttgatcatcaataatgttactagtttcctgcaagttattaacatcaacatcttgagtggtaa |
19095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 8021021 - 8020852
Alignment:
| Q |
12 |
tcatcatttagaaaagctgaacaaagggtgggaaagaagagagttcaacttcatgaaaatgaaaagggtgacaaggtaacttaagaaaataaaactgatc |
111 |
Q |
| |
|
|||||||||||| || |||| ||||| |||||||||||| ||| ||||||| |||||||||||| || || ||||||||||||| ||||| |||| |
|
|
| T |
8021021 |
tcatcatttagagaaactgagaaaagg-tgggaaagaagaaggtt-aacttca---aaatgaaaagggcgatgagataacttaagaaaagaaaaccgatc |
8020927 |
T |
 |
| Q |
112 |
caaggattcttcaccttgattaatattagtgttactagtttcctgccaaagtttaacatcaacatcttgagtggt |
186 |
Q |
| |
|
||| |||||||||||| ||| |||||||||||||||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
8020926 |
caaagattcttcacctcgatcgtcattagtgttactagtttcctgccagatttcaacatcaacatcttgagtggt |
8020852 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 22393571 - 22393515
Alignment:
| Q |
85 |
aggtaacttaagaaaataaaactgatccaaggattcttcaccttgattaatattagt |
141 |
Q |
| |
|
||||||| ||||||||||||| |||||||| | |||||||||||||| |||||||| |
|
|
| T |
22393571 |
aggtaacataagaaaataaaattgatccaaaaagtcttcaccttgattgatattagt |
22393515 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0043 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0043
Description:
Target: scaffold0043; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 52825 - 52881
Alignment:
| Q |
85 |
aggtaacttaagaaaataaaactgatccaaggattcttcaccttgattaatattagt |
141 |
Q |
| |
|
||||||| ||||||||||||| |||||||| | |||||||||||||| |||||||| |
|
|
| T |
52825 |
aggtaacataagaaaataaaattgatccaaaaagtcttcaccttgattgatattagt |
52881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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