View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13038_low_34 (Length: 243)
Name: NF13038_low_34
Description: NF13038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13038_low_34 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 46862991 - 46863215
Alignment:
| Q |
1 |
tgtatcttggacctatatgaaagttttatccataattttattggctctcttagtttctttatactatcagtgctatggtgtttgttaatataatgttaag |
100 |
Q |
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| T |
46862991 |
tgtatcttggacctatatgaaagttttatccataattttattggctctcttagtttctttatactatcagtgctatggtgtttgttaatataatgttaag |
46863090 |
T |
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| Q |
101 |
ttctcagttctcaagactaaaaagcggttaacaaatgctaaatgattggtaaccgaaatggaattgaggagtagttggggaggaagaggacacatttgaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
46863091 |
ttctcagttctcaagactaaaaagcggttaacaaatgctaaatgattggtaaccgaaatggaattgaggagtagttgggtaggaagaggacacatttgaa |
46863190 |
T |
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| Q |
201 |
aggtaagggacatgtgagttgccat |
225 |
Q |
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||||||| ||||||||||||||||| |
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| T |
46863191 |
aggtaagtgacatgtgagttgccat |
46863215 |
T |
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