View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13038_low_7 (Length: 538)
Name: NF13038_low_7
Description: NF13038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13038_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 503; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 503; E-Value: 0
Query Start/End: Original strand, 1 - 519
Target Start/End: Original strand, 4467876 - 4468394
Alignment:
| Q |
1 |
acataaagaatgagagtaatcagttcccctaatcagcattctaatcacatcatatttcaaagaatcaacccaatgatcattcctattaatatcttgatga |
100 |
Q |
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| T |
4467876 |
acataaagaatgagagtaatcagttcccctaatcagcattctaatcacatcatatttcaaagaatcaacccaatgatcattcctattaatatcttgatga |
4467975 |
T |
|
| Q |
101 |
tgcttgtaaatgcaacaaagtgtcccaacttcatttccatgaccaattatatcaccatcacttgctaatttcattgtaacatttttcaatatgatagcca |
200 |
Q |
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| T |
4467976 |
tgcttgtaaatgcaacaaagtgtcccaacttcatttccatgaccaattatatcaccatcacttgctaatttctttgtaacatttttcaatatgatagcca |
4468075 |
T |
|
| Q |
201 |
aaattttctcagccaccttctccacacgtgattgaagagtttccatcttcttgctgcaatttcaacaaattttacattagaaaacattatataaataaaa |
300 |
Q |
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| T |
4468076 |
aaattttctcagccaccttctccacacgtgattgaagagtttccatcttcttgctgcaatttcaacaaattttacattagaaaacattatataaataaaa |
4468175 |
T |
|
| Q |
301 |
ttgaagcaatactatcaaatgaagcaataacttaacagtatgtcaaatagtatctgtgtaattagtataatactattatgtacgaagtatctaaatttgt |
400 |
Q |
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| T |
4468176 |
ttgaagcaataatatcaaatgaagcaataacttaacagtatgtcaaatagtatctgtgtaattagtataatactattatgtacgaagtatctaaatttgt |
4468275 |
T |
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| Q |
401 |
cgggataatcgcacattcacgttatcttaattaattgtttgatctaaaacgtaaagaaatattgtttatataagcaataacatgatgaagaacccagatg |
500 |
Q |
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|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4468276 |
cgggataatcgcacattcacgtgattttaattaattgtttgatctaaaacgtaaagaaatattgtttatataagcaataacatgatgaagaacccagatg |
4468375 |
T |
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| Q |
501 |
aataactagagggggaatc |
519 |
Q |
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||||||||||||||||||| |
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| T |
4468376 |
aataactagagggggaatc |
4468394 |
T |
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