View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1303_low_11 (Length: 325)

Name: NF1303_low_11
Description: NF1303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1303_low_11
NF1303_low_11
[»] chr1 (36 HSPs)
chr1 (1-242)||(50209893-50210134)
chr1 (1-239)||(34509983-34510221)
chr1 (3-242)||(20135387-20135626)
chr1 (3-242)||(22354254-22354493)
chr1 (1-234)||(22532477-22532710)
chr1 (2-205)||(433244-433447)
chr1 (1-242)||(27250420-27250650)
chr1 (1-242)||(22355865-22356095)
chr1 (1-242)||(22357551-22357781)
chr1 (3-242)||(21026880-21027108)
chr1 (1-239)||(20846910-20847137)
chr1 (1-183)||(38801082-38801253)
chr1 (1-127)||(20918917-20919042)
chr1 (1-150)||(33681301-33681450)
chr1 (1-128)||(21754350-21754476)
chr1 (1-127)||(20091154-20091281)
chr1 (1-127)||(20248592-20248718)
chr1 (1-126)||(52927661-52927786)
chr1 (1-62)||(22238009-22238070)
chr1 (1-126)||(22921547-22921672)
chr1 (87-127)||(20637165-20637205)
chr1 (87-127)||(21162080-21162120)
chr1 (92-127)||(16375231-16375266)
chr1 (92-127)||(21407653-21407688)
chr1 (1-127)||(28194128-28194254)
chr1 (92-127)||(52639839-52639874)
chr1 (157-203)||(16758890-16758936)
chr1 (1-54)||(21895912-21895965)
chr1 (87-128)||(26065254-26065295)
chr1 (1-54)||(26065382-26065435)
chr1 (1-53)||(21162117-21162169)
chr1 (155-203)||(21342332-21342380)
chr1 (155-203)||(21347197-21347245)
chr1 (1-53)||(35260735-35260787)
chr1 (87-127)||(35981452-35981492)
chr1 (87-127)||(45310135-45310175)
[»] scaffold0145 (1 HSPs)
scaffold0145 (1-242)||(38960-39200)
[»] chr7 (42 HSPs)
chr7 (1-242)||(38227680-38227921)
chr7 (1-242)||(9509389-9509630)
chr7 (1-236)||(3564044-3564279)
chr7 (1-242)||(12699032-12699273)
chr7 (1-241)||(15143717-15143957)
chr7 (1-206)||(44116741-44116945)
chr7 (1-242)||(16385938-16386168)
chr7 (1-242)||(40443589-40443818)
chr7 (1-242)||(27847524-27847754)
chr7 (93-242)||(10589238-10589386)
chr7 (1-242)||(26212196-26212426)
chr7 (1-206)||(17061640-17061845)
chr7 (1-127)||(28504981-28505106)
chr7 (1-123)||(39267326-39267447)
chr7 (1-127)||(18302494-18302619)
chr7 (2-127)||(34201099-34201223)
chr7 (1-123)||(15754567-15754689)
chr7 (1-127)||(9751230-9751355)
chr7 (1-206)||(12756397-12756601)
chr7 (1-127)||(2831986-2832110)
chr7 (3-207)||(12255473-12255677)
chr7 (1-128)||(810809-810936)
chr7 (1-127)||(44014489-44014615)
chr7 (1-193)||(16056576-16056769)
chr7 (1-135)||(22073223-22073357)
chr7 (1-203)||(2279798-2280000)
chr7 (13-128)||(16219408-16219523)
chr7 (53-127)||(11995762-11995835)
chr7 (1-56)||(68132-68187)
chr7 (88-127)||(9389462-9389501)
chr7 (92-127)||(12718966-12719001)
chr7 (92-127)||(12723877-12723912)
chr7 (92-127)||(16906974-16907009)
chr7 (92-127)||(18279701-18279736)
chr7 (92-127)||(18283664-18283699)
chr7 (1-56)||(21064842-21064897)
chr7 (89-127)||(68061-68099)
chr7 (1-31)||(11995738-11995768)
chr7 (1-31)||(47832219-47832249)
chr7 (1-54)||(12901793-12901846)
chr7 (3-56)||(16324392-16324445)
chr7 (1-53)||(2529657-2529709)
[»] chr3 (55 HSPs)
chr3 (1-242)||(18438734-18438975)
chr3 (5-242)||(26687087-26687324)
chr3 (1-242)||(11424443-11424684)
chr3 (1-242)||(25476065-25476306)
chr3 (1-241)||(40213401-40213641)
chr3 (1-242)||(14572788-14573029)
chr3 (1-242)||(14576513-14576754)
chr3 (1-242)||(17488056-17488298)
chr3 (1-242)||(13442474-13442715)
chr3 (8-242)||(23083048-23083282)
chr3 (1-242)||(17499538-17499780)
chr3 (1-239)||(14973057-14973295)
chr3 (44-242)||(43841132-43841330)
chr3 (2-242)||(20698128-20698357)
chr3 (1-203)||(17247966-17248168)
chr3 (1-206)||(53070379-53070583)
chr3 (1-127)||(12340068-12340193)
chr3 (1-127)||(12852044-12852169)
chr3 (1-128)||(12933990-12934117)
chr3 (1-127)||(14665921-14666046)
chr3 (1-127)||(14669076-14669201)
chr3 (1-127)||(14735434-14735559)
chr3 (1-128)||(49667763-49667890)
chr3 (2-242)||(30030039-30030268)
chr3 (1-128)||(32307983-32308109)
chr3 (3-242)||(42386611-42386850)
chr3 (1-123)||(9513228-9513351)
chr3 (1-123)||(9521203-9521326)
chr3 (1-128)||(1644363-1644489)
chr3 (1-124)||(49389324-49389446)
chr3 (1-71)||(14179693-14179763)
chr3 (1-242)||(12399409-12399636)
chr3 (5-127)||(13210012-13210133)
chr3 (113-242)||(16796747-16796875)
chr3 (1-75)||(4588495-4588569)
chr3 (2-127)||(16097645-16097770)
chr3 (1-128)||(16104095-16104221)
chr3 (1-128)||(324549-324676)
chr3 (1-47)||(43842573-43842619)
chr3 (87-207)||(52523493-52523613)
chr3 (160-208)||(12339985-12340033)
chr3 (4-40)||(17247203-17247239)
chr3 (92-127)||(7109999-7110034)
chr3 (92-127)||(7113934-7113969)
chr3 (92-127)||(22321965-22322000)
chr3 (92-127)||(22337020-22337055)
chr3 (92-127)||(27409417-27409452)
chr3 (1-31)||(12171797-12171827)
chr3 (1-63)||(14501578-14501640)
chr3 (87-204)||(37250932-37251050)
chr3 (1-63)||(45797622-45797684)
chr3 (87-127)||(1465175-1465215)
chr3 (82-126)||(12171865-12171909)
chr3 (87-127)||(22110116-22110156)
chr3 (2-54)||(37250793-37250845)
[»] chr5 (35 HSPs)
chr5 (1-242)||(21985827-21986068)
chr5 (1-242)||(24493768-24494009)
chr5 (1-242)||(13095694-13095935)
chr5 (1-242)||(13025510-13025751)
chr5 (1-242)||(24529420-24529662)
chr5 (1-242)||(9078152-9078393)
chr5 (1-242)||(25421732-25421973)
chr5 (1-242)||(25431594-25431835)
chr5 (1-242)||(23390176-23390417)
chr5 (1-236)||(1096673-1096908)
chr5 (4-235)||(8286536-8286756)
chr5 (1-206)||(11580925-11581130)
chr5 (1-242)||(21292661-21292891)
chr5 (1-242)||(22075219-22075449)
chr5 (3-206)||(36154510-36154713)
chr5 (1-242)||(22107064-22107294)
chr5 (1-127)||(22119873-22119998)
chr5 (1-127)||(19660517-19660643)
chr5 (1-127)||(24767017-24767142)
chr5 (1-127)||(22959213-22959339)
chr5 (1-123)||(21565863-21565985)
chr5 (1-200)||(22144292-22144491)
chr5 (1-127)||(21871251-21871377)
chr5 (1-127)||(21875531-21875657)
chr5 (2-122)||(19669219-19669340)
chr5 (1-127)||(5888855-5888981)
chr5 (88-128)||(20026706-20026746)
chr5 (87-135)||(21501920-21501968)
chr5 (92-127)||(19472493-19472528)
chr5 (92-127)||(20296145-20296180)
chr5 (88-127)||(31342414-31342453)
chr5 (89-127)||(25744036-25744074)
chr5 (87-127)||(123074-123114)
chr5 (87-123)||(21741309-21741345)
chr5 (87-127)||(23201680-23201720)
[»] chr2 (28 HSPs)
chr2 (1-242)||(23076642-23076881)
chr2 (1-237)||(23660227-23660463)
chr2 (3-242)||(22337315-22337554)
chr2 (1-242)||(22737860-22738101)
chr2 (1-242)||(298495-298735)
chr2 (5-242)||(27753775-27754012)
chr2 (1-242)||(22730913-22731155)
chr2 (1-205)||(32451609-32451813)
chr2 (2-242)||(23286061-23286290)
chr2 (1-239)||(37807-38034)
chr2 (8-242)||(20309305-20309528)
chr2 (1-127)||(23071643-23071768)
chr2 (1-242)||(23654090-23654307)
chr2 (137-237)||(23060717-23060815)
chr2 (1-124)||(28406297-28406420)
chr2 (1-126)||(22133897-22134020)
chr2 (87-203)||(23708384-23708500)
chr2 (1-46)||(28291982-28292027)
chr2 (89-127)||(22740730-22740768)
chr2 (92-127)||(12901286-12901321)
chr2 (92-127)||(24628252-24628287)
chr2 (92-127)||(24649654-24649689)
chr2 (92-127)||(27379206-27379241)
chr2 (92-127)||(27383252-27383287)
chr2 (92-127)||(27602094-27602129)
chr2 (92-127)||(41530783-41530818)
chr2 (157-201)||(19672068-19672112)
chr2 (91-127)||(31756232-31756268)
[»] chr8 (35 HSPs)
chr8 (1-242)||(23406581-23406822)
chr8 (1-242)||(18818090-18818330)
chr8 (1-242)||(22626935-22627176)
chr8 (2-242)||(21923609-21923849)
chr8 (1-242)||(28648724-28648965)
chr8 (1-242)||(20536408-20536649)
chr8 (2-241)||(23648754-23648993)
chr8 (3-242)||(6759456-6759696)
chr8 (1-242)||(18878917-18879158)
chr8 (3-237)||(16092023-16092257)
chr8 (5-242)||(22875265-22875502)
chr8 (1-206)||(41598420-41598625)
chr8 (1-242)||(7372970-7373190)
chr8 (2-242)||(25362832-25363061)
chr8 (1-195)||(21918690-21918874)
chr8 (1-242)||(31971455-31971685)
chr8 (5-242)||(16199342-16199567)
chr8 (1-127)||(5865957-5866082)
chr8 (1-127)||(17141229-17141354)
chr8 (5-127)||(21249697-21249818)
chr8 (5-127)||(21255535-21255656)
chr8 (1-127)||(21491308-21491433)
chr8 (115-242)||(45130793-45130919)
chr8 (1-126)||(21674021-21674146)
chr8 (1-127)||(26355378-26355504)
chr8 (1-56)||(45130711-45130766)
chr8 (15-127)||(39834147-39834259)
chr8 (1-56)||(19801107-19801162)
chr8 (92-127)||(43252110-43252145)
chr8 (1-31)||(38854931-38854961)
chr8 (1-53)||(20499049-20499101)
chr8 (87-127)||(21972353-21972393)
chr8 (87-127)||(21976438-21976478)
chr8 (1-29)||(23760520-23760548)
chr8 (87-127)||(37116664-37116704)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-241)||(16895-17135)
scaffold0056 (3-55)||(79044-79096)
[»] scaffold0175 (2 HSPs)
scaffold0175 (1-242)||(13292-13533)
scaffold0175 (1-126)||(34437-34561)
[»] scaffold0292 (2 HSPs)
scaffold0292 (1-237)||(547-783)
scaffold0292 (2-239)||(3673-3910)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-242)||(8212-8454)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-242)||(52113-52353)
scaffold0011 (1-239)||(167670-167897)
[»] chr6 (47 HSPs)
chr6 (5-242)||(18409511-18409748)
chr6 (1-242)||(19303221-19303462)
chr6 (1-242)||(29060740-29060981)
chr6 (1-242)||(17287476-17287717)
chr6 (1-242)||(22779907-22780148)
chr6 (5-242)||(25629039-25629276)
chr6 (1-242)||(20637974-20638204)
chr6 (1-242)||(20360651-20360881)
chr6 (5-242)||(20593973-20594210)
chr6 (1-205)||(18821510-18821703)
chr6 (1-128)||(28496153-28496280)
chr6 (1-128)||(29808563-29808691)
chr6 (1-127)||(25611403-25611530)
chr6 (1-202)||(18456955-18457155)
chr6 (1-123)||(1561622-1561744)
chr6 (1-195)||(16920324-16920507)
chr6 (1-127)||(21939699-21939824)
chr6 (87-195)||(22831749-22831856)
chr6 (1-127)||(4667893-4668019)
chr6 (1-127)||(15894110-15894237)
chr6 (1-125)||(19652512-19652636)
chr6 (1-123)||(25603065-25603188)
chr6 (87-175)||(11185769-11185856)
chr6 (1-127)||(4189271-4189397)
chr6 (1-127)||(4674740-4674866)
chr6 (3-127)||(4185505-4185629)
chr6 (2-126)||(27332965-27333089)
chr6 (2-126)||(27393705-27393829)
chr6 (1-71)||(22334562-22334632)
chr6 (1-128)||(23019721-23019848)
chr6 (1-60)||(31155078-31155137)
chr6 (89-127)||(25641953-25641991)
chr6 (90-206)||(25644558-25644674)
chr6 (87-127)||(22080503-22080543)
chr6 (92-127)||(8244158-8244193)
chr6 (92-127)||(11567160-11567195)
chr6 (92-127)||(19870888-19870923)
chr6 (92-127)||(22863243-22863278)
chr6 (92-127)||(23395366-23395401)
chr6 (191-237)||(5834367-5834413)
chr6 (191-237)||(20177119-20177165)
chr6 (191-237)||(22158826-22158872)
chr6 (87-127)||(16924647-16924687)
chr6 (87-127)||(16929362-16929402)
chr6 (87-127)||(19668688-19668728)
chr6 (87-127)||(23657189-23657229)
chr6 (87-127)||(31155164-31155204)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-242)||(23082-23323)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-239)||(25745-25983)
scaffold0122 (1-236)||(33174-33410)
[»] chr4 (41 HSPs)
chr4 (2-242)||(22636634-22636874)
chr4 (2-242)||(15091096-15091337)
chr4 (1-242)||(14038848-14039090)
chr4 (2-242)||(44053029-44053269)
chr4 (2-248)||(16377203-16377450)
chr4 (1-242)||(12902957-12903187)
chr4 (1-240)||(16239672-16239889)
chr4 (1-242)||(7089077-7089307)
chr4 (1-242)||(3096843-3097073)
chr4 (65-242)||(7893900-7894077)
chr4 (1-186)||(7798953-7799138)
chr4 (1-206)||(44928603-44928808)
chr4 (1-242)||(14052993-14053223)
chr4 (1-221)||(17047764-17047972)
chr4 (87-239)||(23374126-23374277)
chr4 (1-127)||(15552129-15552254)
chr4 (1-127)||(24029057-24029182)
chr4 (1-127)||(22633893-22634018)
chr4 (2-127)||(13812490-13812614)
chr4 (1-125)||(16596963-16597086)
chr4 (1-206)||(44102446-44102650)
chr4 (1-127)||(20156970-20157095)
chr4 (2-128)||(21814984-21815109)
chr4 (2-128)||(21815313-21815438)
chr4 (2-128)||(21818406-21818531)
chr4 (1-128)||(12774313-12774439)
chr4 (1-127)||(8846689-8846816)
chr4 (40-127)||(3332201-3332287)
chr4 (1-207)||(52242873-52243079)
chr4 (1-74)||(6190800-6190874)
chr4 (121-205)||(6190699-6190782)
chr4 (1-152)||(15099640-15099791)
chr4 (1-207)||(15464609-15464816)
chr4 (1-56)||(43198268-43198323)
chr4 (1-33)||(17046725-17046757)
chr4 (92-127)||(4561107-4561142)
chr4 (92-127)||(5756711-5756746)
chr4 (92-127)||(33742675-33742710)
chr4 (1-56)||(39705968-39706023)
chr4 (1-54)||(15868315-15868368)
chr4 (2-54)||(12287814-12287866)
[»] scaffold0021 (4 HSPs)
scaffold0021 (1-242)||(124785-125023)
scaffold0021 (3-70)||(62932-63000)
scaffold0021 (87-128)||(136132-136173)
scaffold0021 (87-128)||(144840-144881)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-242)||(2051-2292)
scaffold0016 (1-127)||(207199-207324)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-242)||(23982-24222)
[»] scaffold0305 (1 HSPs)
scaffold0305 (1-242)||(20603-20844)
[»] scaffold0026 (5 HSPs)
scaffold0026 (1-242)||(40057-40297)
scaffold0026 (124-242)||(26095-26213)
scaffold0026 (5-112)||(26555-26662)
scaffold0026 (1-127)||(59183-59308)
scaffold0026 (1-59)||(39611-39669)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-242)||(40112-40352)
[»] scaffold0228 (3 HSPs)
scaffold0228 (1-242)||(4707-4949)
scaffold0228 (1-242)||(12289-12531)
scaffold0228 (1-242)||(22241-22483)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-242)||(8675-8916)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-242)||(16279-16521)
[»] scaffold0003 (1 HSPs)
scaffold0003 (9-242)||(339639-339871)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-239)||(740-967)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-205)||(51564-51768)
scaffold0034 (1-152)||(32826-32977)
[»] scaffold0130 (2 HSPs)
scaffold0130 (49-242)||(28030-28223)
scaffold0130 (1-54)||(28924-28977)
[»] scaffold0120 (3 HSPs)
scaffold0120 (1-206)||(16323-16528)
scaffold0120 (2-242)||(32640-32880)
scaffold0120 (2-242)||(46125-46365)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-236)||(5801-6036)
[»] scaffold0627 (1 HSPs)
scaffold0627 (1-183)||(163-345)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-242)||(13411-13641)
[»] scaffold0165 (2 HSPs)
scaffold0165 (1-242)||(3681-3911)
scaffold0165 (1-242)||(7745-7975)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-242)||(10117-10347)
[»] scaffold0235 (2 HSPs)
scaffold0235 (1-242)||(11204-11434)
scaffold0235 (1-54)||(14027-14080)
[»] scaffold0839 (1 HSPs)
scaffold0839 (1-191)||(1757-1947)
[»] scaffold0484 (1 HSPs)
scaffold0484 (1-242)||(1114-1344)
[»] scaffold0088 (2 HSPs)
scaffold0088 (87-242)||(21111-21265)
scaffold0088 (1-56)||(21276-21331)
[»] scaffold0395 (1 HSPs)
scaffold0395 (1-220)||(642-862)
[»] scaffold0141 (1 HSPs)
scaffold0141 (87-239)||(39679-39831)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-128)||(20426-20553)
[»] scaffold0049 (1 HSPs)
scaffold0049 (87-239)||(74981-75133)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-242)||(13695-13925)
[»] scaffold0114 (1 HSPs)
scaffold0114 (8-242)||(15163-15386)
[»] scaffold0540 (2 HSPs)
scaffold0540 (1-146)||(693-838)
scaffold0540 (155-242)||(2985-3072)
[»] scaffold0084 (1 HSPs)
scaffold0084 (36-242)||(10363-10571)
[»] scaffold0070 (1 HSPs)
scaffold0070 (5-242)||(4723-4960)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-195)||(743-926)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-242)||(17688-17908)
[»] scaffold0490 (2 HSPs)
scaffold0490 (87-221)||(2173-2306)
scaffold0490 (1-56)||(2327-2382)
[»] scaffold0309 (2 HSPs)
scaffold0309 (87-241)||(6811-6964)
scaffold0309 (1-56)||(6985-7040)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-242)||(135-366)
scaffold0358 (1-242)||(4911-5142)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-132)||(15295-15426)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-127)||(2125-2250)
[»] scaffold0142 (2 HSPs)
scaffold0142 (1-132)||(17090-17221)
scaffold0142 (21-127)||(7471-7576)
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-242)||(16479-16709)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-127)||(24331-24456)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-188)||(51833-52009)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-127)||(80012-80137)
[»] scaffold0028 (2 HSPs)
scaffold0028 (1-128)||(132967-133094)
scaffold0028 (92-127)||(58492-58527)
[»] scaffold0403 (1 HSPs)
scaffold0403 (3-187)||(5104-5276)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-242)||(32264-32494)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-195)||(4822-5005)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-124)||(12489-12611)
[»] scaffold0347 (1 HSPs)
scaffold0347 (1-127)||(344-469)
[»] scaffold0218 (1 HSPs)
scaffold0218 (1-123)||(28960-29081)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-128)||(32397-32524)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-127)||(7974-8099)
[»] scaffold1984 (1 HSPs)
scaffold1984 (5-150)||(422-567)
[»] scaffold0261 (2 HSPs)
scaffold0261 (1-127)||(15974-16099)
scaffold0261 (3-63)||(17948-18008)
[»] scaffold0192 (1 HSPs)
scaffold0192 (5-127)||(10226-10347)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-127)||(9514-9639)
[»] scaffold0106 (2 HSPs)
scaffold0106 (88-192)||(1536-1639)
scaffold0106 (88-192)||(7513-7616)
[»] scaffold0475 (1 HSPs)
scaffold0475 (1-127)||(9391-9517)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-150)||(19558-19707)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-128)||(2483-2609)
[»] scaffold0503 (1 HSPs)
scaffold0503 (2-206)||(12165-12368)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-128)||(28489-28616)
[»] scaffold0556 (1 HSPs)
scaffold0556 (1-127)||(7126-7252)
[»] scaffold0064 (1 HSPs)
scaffold0064 (2-195)||(47233-47415)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-124)||(20106-20228)
[»] scaffold1137 (1 HSPs)
scaffold1137 (2-128)||(1982-2108)
[»] scaffold0266 (1 HSPs)
scaffold0266 (1-74)||(18638-18712)
[»] scaffold0247 (2 HSPs)
scaffold0247 (87-151)||(6561-6625)
scaffold0247 (1-47)||(6508-6554)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-128)||(101709-101835)
[»] scaffold0555 (3 HSPs)
scaffold0555 (4-123)||(897-1017)
scaffold0555 (1-42)||(10248-10289)
scaffold0555 (87-128)||(10306-10347)
[»] scaffold0876 (1 HSPs)
scaffold0876 (1-61)||(2765-2825)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-127)||(45469-45596)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-127)||(161000-161126)
[»] scaffold0389 (1 HSPs)
scaffold0389 (1-47)||(13288-13334)
[»] scaffold0320 (1 HSPs)
scaffold0320 (2-56)||(12381-12435)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-128)||(10842-10969)
[»] scaffold0810 (1 HSPs)
scaffold0810 (1-56)||(3318-3373)
[»] scaffold0151 (1 HSPs)
scaffold0151 (3-46)||(10540-10583)
[»] scaffold0138 (1 HSPs)
scaffold0138 (1-127)||(13255-13381)
[»] scaffold0010 (2 HSPs)
scaffold0010 (87-205)||(60479-60598)
scaffold0010 (1-127)||(130222-130348)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-55)||(2324-2378)
[»] scaffold0012 (2 HSPs)
scaffold0012 (157-206)||(225643-225692)
scaffold0012 (5-56)||(227878-227929)
[»] scaffold0507 (1 HSPs)
scaffold0507 (2-128)||(7738-7864)
[»] scaffold0372 (1 HSPs)
scaffold0372 (92-127)||(4875-4910)
[»] scaffold0116 (2 HSPs)
scaffold0116 (1-56)||(43464-43519)
scaffold0116 (1-56)||(47384-47439)
[»] scaffold0029 (2 HSPs)
scaffold0029 (92-127)||(61386-61421)
scaffold0029 (94-127)||(65304-65337)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-47)||(708-754)
[»] scaffold0357 (1 HSPs)
scaffold0357 (1-54)||(13595-13648)
[»] scaffold0123 (1 HSPs)
scaffold0123 (160-205)||(25343-25388)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-54)||(103263-103316)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-54)||(80726-80779)
scaffold0022 (87-127)||(128735-128775)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-54)||(268116-268169)
[»] scaffold0184 (1 HSPs)
scaffold0184 (87-127)||(3993-4033)
[»] scaffold0044 (1 HSPs)
scaffold0044 (92-128)||(62556-62592)
[»] scaffold0017 (1 HSPs)
scaffold0017 (92-128)||(192757-192793)


Alignment Details
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 50209893 - 50210134
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgga-ttctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  50209893 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaacttttggaattctgacc-tgaactcgcca 50209991  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||||||||||||||||||||||||||||| ||     
T  50209992 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagttgaaccttt 50210091  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  50210092 gggtagtattgagacttaatgatgatgttaattataatctgtg 50210134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 34510221 - 34509983
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttggat-tctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||| ||||||||  ||||||| ||||||||||    
T  34510221 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttggaaatctgacc-tgaactcgcc 34510124  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||| ||||||| ||    
T  34510123 acggcgagcagaggctctcgcctcacgagtgacccagaaacagagtgtcatgttaggtttttgcgacctttgttgcacgagttgttgagggttgaacctt 34510024  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatct 239  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  34510023 ggggtagtattgagacttaatgatgatgttaattataatct 34509983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 3 - 242
Target Start/End: Complemental strand, 20135626 - 20135387
Alignment:
Q  3 tgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaac-ttttgga-ttctgaccctgaactcgccac 100  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||| ||||||| ||||||||  ||||||||||     
T  20135626 tgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagacttagaatgaaacattttggaattctgacc--gaactcgccat 20135529  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgg 200  Q
    |||||||||| |||||| |||||||||| |||||||||||||||| ||||||| |||| || ||||||||||| ||||||||||||||||||||| || |    
T  20135528 ggcgagcagaagctctcacctcgcgagtaacccagaaacagagtgacttgttaggtttatgcgacctttgttgtacgagttgttgagagttgaaccttag 20135429  T
Q  201 ggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||| |  ||| |||||| | ||||||||||||||||||    
T  20135428 ggtagtagtaagacctaatgatgttgttaattataatctgtg 20135387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 3 - 242
Target Start/End: Original strand, 22354254 - 22354493
Alignment:
Q  3 tgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgccac 100  Q
    ||||||||||| ||||||||||||||| ||  ||| ||||||||| ||||||| ||||| ||||||||||||| ||| ||||||||| ||||||||||||    
T  22354254 tgaacatgtcttataatgattaggaaataacgtaggatgagattgaacctggatagattgtagaatgaaacttgtgggattctgacc-tgaactcgccac 22354352  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgg 200  Q
    |||||| ||||||||||||||||| |||||||||||||||||||| ||||||| ||||| | |||||||||||||||||||||||||| |||||| ||      
T  22354353 ggcgagtagaggctctcgcctcgcaagtgacccagaaacagagtgacttgttaggtttt-gcgacctttgttgcacgagttgttgagaattgaaccttta 22354451  T
Q  201 ggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||  |||||||||||||||||||||||||||||||    
T  22354452 ggtagtattaagacttaatgaggatgttaattataatctgtg 22354493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 22532710 - 22532477
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttggat-tctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| |||| ||||||||| ||||||||  ||||||  ||||||||||    
T  22532710 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaggattgtagaatgaa-cttttggaaatctgact-tgaactcgcc 22532613  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| ||||||| | ||||| ||||||||||||||||| ||||||||||||||| ||    
T  22532612 acggtgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgacttgttaggattttgcgacctttgttgcacgagctgttgagagttgaacctt 22532513  T
Q  199 ggggtagtattgggacttaatgaggatgttaattat 234  Q
    | |||||||||| |||||||||| ||||||| ||||    
T  22532512 gaggtagtattgagacttaatgatgatgttatttat 22532477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 433447 - 433244
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||| ||| ||||| |||||||||||||     
T  433447 ctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaatctga-cctgaactcgccat 433349  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg-ttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||||||||||||||||||||||||||||   || | || |||| ||| | ||||| || |||||| |||||||| |||||||||||||| |||    
T  433348 ggcgagcagaggctctcgcctcgcgagtgacccagttgcaaaatg-cttgtttaggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttg 433250  T
Q  200 gggtag 205  Q
    ||||||    
T  433249 gggtag 433244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 27250420 - 27250650
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    ||||||||||||||||||||||||||||||||| ||| ||| ||||| |||||||| ||         || || | ||||||||||| ||||||||||||    
T  27250420 cctgaacatgtctaataatgattaggaaagaatgtaggatgggattgaacctggaatga---------aacctgtgggattctgacc-tgaactcgccac 27250509  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgg 200  Q
    | ||||||||||||||||||||||||||||| ||||||||||||  |||||| |  ||||| ||||||||||||||||||||| ||||||||||| || |    
T  27250510 gtcgagcagaggctctcgcctcgcgagtgacacagaaacagagtcccttgtt-atattttgcgacctttgttgcacgagttgtcgagagttgaacctttg 27250608  T
Q  201 ggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||| ||||  ||||||||| || |||||||||||||||||    
T  27250609 ggtagcattgatacttaatgaagaggttaattataatctgtg 27250650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 22355865 - 22356095
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||          ||||| || ||| ||||||||| |||||||||||    
T  22355865 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------tgaaatttgtgggattctgacc-tgaactcgcca 22355953  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtc-ttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||| | |||||| | ||||| ||||||||||||||||||||| ||||||||||| ||    
T  22355954 cggcgagcagaggct-tcgcatcgcgagtgacctagaaacagagtgacattgtta-gattttgagacctttgttgcacgagttgtcgagagttgaacctt 22356051  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||| ||| |||  |||||||||| ||||||||||||||||||||    
T  22356052 gggatagcattaagacttaatgatgatgttaattataatctgtg 22356095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 22357551 - 22357781
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||          ||||| || ||| ||||||||| |||||||||||    
T  22357551 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------tgaaatttgtgggattctgacc-tgaactcgcca 22357639  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtc-ttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||| | |||||| | ||||| ||||||||||||||||||||| ||||||||||| ||    
T  22357640 cggcgagcagaggct-tcgcatcgcgagtgacctagaaacagagtgacattgtta-gattttgagacctttgttgcacgagttgtcgagagttgaacctt 22357737  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||| ||| |||  |||||||||| ||||||||||||||||||||    
T  22357738 gggatagcattaagacttaatgatgatgttaattataatctgtg 22357781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 3 - 242
Target Start/End: Complemental strand, 21027108 - 21026880
Alignment:
Q  3 tgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgccacg 101  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||          |||||||| || | |||||||| | |||||||||||    
T  21027108 tgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctggaa----------tgaaacttgtgaggttctgacc-taaactcgccacg 21027020  T
Q  102 gcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggg 201  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||| || ||||| |||||||||||||||||||||||||  || ||| || ||    
T  21027019 gcgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgacttgtt-agattttgcgacctttgttgcacgagttgttgaggattaaacctttgg 21026921  T
Q  202 gtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||| |||  |||||||||| || |||||||||||||||||    
T  21026920 gtagcattaagacttaatgaagaggttaattataatctgtg 21026880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 20846910 - 20847137
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    |||||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||          |||||||| || | || ||||| |||||||||||    
T  20846910 cctgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctggaa----------tgaaacttgtgaggttttgacc-tgaactcgcca 20846998  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||| || ||||| |||||||||||||||||||||||||  || ||| ||     
T  20846999 cggcgagcagaggctcttgcctcgcgagtgacccagaaacagagtgacttgtt-agattttgcgacctttgttgcacgagttgttgaggattaaaccttt 20847097  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatct 239  Q
    |||||| |||  |||||||||| || |||||  |||||||    
T  20847098 gggtagcattaagacttaatgaagaggttaaccataatct 20847137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 38801082 - 38801253
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    ||||||||||||||||||||||||||||||||| ||| ||| ||||| ||||||||          ||||  | | ||||||||||| ||||||||||||    
T  38801082 cctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgaacctggaat---------tgaacttgtgggattctgacc-tgaactcgccac 38801171  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgt 183  Q
    |||||| ||||||||||||||||||||||||| |||||||||||| |||||| || ||||| ||||||||||| |||||||||    
T  38801172 ggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt-agattttgcgacctttgttgtacgagttgt 38801253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 20919042 - 20918917
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| |||||||  || ||| | || |||||  ||||||||||||    
T  20919042 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatttaaatttggagaatctga--ctgaactcgcca 20918945  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  20918944 tggcgagcagaggctctcgcctcgcgag 20918917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 33681450 - 33681301
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    |||||| |||||||||||||||||||||||| |  |||||||||||| ||||||||||| |||||||||||  |||  || | ||  |||||||||||||    
T  33681450 cctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatttttgtgagt-tgcacctgaactcgcca 33681352  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg 150  Q
     |||||||||||||||||||||||||| | ||||||  |||||||| ||||    
T  33681351 tggcgagcagaggctctcgcctcgcgaattacccagttacagagtgccttg 33681301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 21754476 - 21754350
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||| ||||||| |||||| |||| |||||||||||  || || |  |||| |||||||||||||    
T  21754476 cctgaacatgtctaataatgattaggaaagattggagaaagagattgaacctgggaagactttagaatgaattttgtgaa--ctgaacctgaactcgcca 21754379  T
Q  100 cggcgagcagaggctctcgcctcgcgagt 128  Q
     ||||||||||||||||||||||||||||    
T  21754378 tggcgagcagaggctctcgcctcgcgagt 21754350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 20091154 - 20091281
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaac--ttttggattctgaccctgaactcgcc 98  Q
    ||||||||||||||||| |||||||||  |||| ||  ||||||||||||||| ||||| ||||||||||||   || ||||||||| ||||||||||||    
T  20091154 cctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctgaaaagacttagaatgaaacaacttgggattctga-cctgaactcgcc 20091252  T
Q  99 acggcgagcagaggctctcgcctcgcgag 127  Q
    | |||||||||| | |||| |||||||||    
T  20091253 atggcgagcagatgttctcacctcgcgag 20091281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 20248718 - 20248592
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    |||||||||||||||||||||||||||||||    |||||||||||| ||||||| ||| |||||||||||  |||  ||  |||| |||||||||||||    
T  20248718 cctgaacatgtctaataatgattaggaaagatcggagaatgagattgaacctggagagactttagaatgaatttttgtgaa-ctgaacctgaactcgcca 20248620  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||| ||||||| ||||||||||||    
T  20248619 tggcgagtagaggctatcgcctcgcgag 20248592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 52927661 - 52927786
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    |||||||||||||||||||||||| |||||| |  |||||||||||| ||||||||||| ||| |||||||  ||||  | |  || |||||||||||||    
T  52927661 cctgaacatgtctaataatgattatgaaagattggagaatgagattgaacctggaaagattttggaatgaattttttaaagttaga-cctgaactcgcca 52927759  T
Q  100 cggcgagcagaggctctcgcctcgcga 126  Q
     |||||| |||||| ||||||||||||    
T  52927760 tggcgagtagaggccctcgcctcgcga 52927786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22238070 - 22238009
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt 62  Q
    |||||||||||||||||||| |||||||||| |  |||||||||||  ||||||||||||||    
T  22238070 cctgaacatgtctaataatggttaggaaagattggagaatgagattaaacctggaaagattt 22238009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 22921547 - 22921672
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  ||| |||||||| ||| |||| || || |||| |||  |||  || |  || | |||||||||||    
T  22921547 cctgaacatgtctaataatgattaggaaagattggagattgagattgaaccaggaatagtttaagaacgaatttttgagagttaga-cttgaactcgcca 22921645  T
Q  100 cggcgagcagaggctctcgcctcgcga 126  Q
     |||||| |||||||||||||||||||    
T  22921646 tggcgagtagaggctctcgcctcgcga 22921672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 20637205 - 20637165
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  20637205 cctgaactcgccatggcgagtagaggctctcgcctcgcgag 20637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 21162120 - 21162080
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  21162120 cctgtactcgccatggcgagcagaggctctcgcctcgcgag 21162080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 16375231 - 16375266
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16375231 actcgccacggcgagcagatgctctcgcctcgcgag 16375266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 21407688 - 21407653
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  21407688 actcgccacggcgagcagatgctctcgcctcgcgag 21407653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 28194128 - 28194254
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||| ||| | || |||||||||||||| | |||| |||||||| ||||| || || || |||||||| ||||  || | ||  |||||||||||||    
T  28194128 cctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgaaatagtttaagaatgaatctttgtgagt-tgcacctgaactcgcca 28194226  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     ||| || ||||||||||||||||||||    
T  28194227 tggcaagtagaggctctcgcctcgcgag 28194254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 52639874 - 52639839
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  52639874 actcgccacggcgagcagatgctctcgcctcgcgag 52639839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 16758936 - 16758890
Alignment:
Q  157 ttttgtgacctttgttgcacgagttgttgagagttgaactttggggt 203  Q
    ||||| || |||||| ||||||||||||||||||||||| |||||||    
T  16758936 ttttgcgatctttgtcgcacgagttgttgagagttgaaccttggggt 16758890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21895912 - 21895965
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctgg 54  Q
    |||||||| || ||||||||||||||||||  |||||| |||||||| ||||||    
T  21895912 cctgaacaagtataataatgattaggaaagtttttagattgagattgaacctgg 21895965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 26065295 - 26065254
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgagt 128  Q
    |||||||||||||  ||||| |||||||||||||||||||||    
T  26065295 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 26065254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26065435 - 26065382
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctgg 54  Q
    ||||||||||| |||||||||||||| |||  |||||| |||||||| ||||||    
T  26065435 cctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 26065382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21162169 - 21162117
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctg 53  Q
    |||||| | ||||||||| |||| ||||||||| ||||||||||||| |||||    
T  21162169 cctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctg 21162117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 21342380 - 21342332
Alignment:
Q  155 gtttttgtgacctttgttgcacgagttgttgagagttgaactttggggt 203  Q
    ||||||| || | |||| ||||||||||||||||||||||| |||||||    
T  21342380 gtttttgcgatcgttgtcgcacgagttgttgagagttgaaccttggggt 21342332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 21347245 - 21347197
Alignment:
Q  155 gtttttgtgacctttgttgcacgagttgttgagagttgaactttggggt 203  Q
    ||||||| || | |||| ||||||||||||||||||||||| |||||||    
T  21347245 gtttttgcgatcgttgtcgcacgagttgttgagagttgaaccttggggt 21347197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35260735 - 35260787
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctg 53  Q
    ||||||||||| |||||||||||||| |||  |||||| |||||||| |||||    
T  35260735 cctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 35260787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 35981452 - 35981492
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||| || ||| ||||||||||||||||||||    
T  35981452 cctgaactcgccatggtgagtagaggctctcgcctcgcgag 35981492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 45310135 - 45310175
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||| |||||||| |||||||||| ||||||||||||||||    
T  45310135 cctgtactcgccatggcgagcagatgctctcgcctcgcgag 45310175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 39200 - 38960
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| |||||||||||| ||||||||||||    
T  39200 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttgaatgaaacttgtggattctgacc-tgaactcgccac 39102  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgg 200  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  39101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacatagtgacttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttgg 39002  T
Q  201 ggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||  |||||||||| ||||||||||||||||||||    
T  39001 ggtagtattaagacttaatgatgatgttaattataatctgtg 38960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 38227921 - 38227680
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaactttt-ggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  38227921 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaactttttggattctgacc-tgaactcgcca 38227823  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| |||||||||||||||||||||| |||||||||| |||    
T  38227822 cggcgagcagaggctctcgcctcgcgagtgacccataaacagagtgccttgttaggtttttgcgacctttgttgcacgagttgttaagagttgaaccttg 38227723  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||  |||||||||| ||||||||||||||| ||||    
T  38227722 gggtagtattaagacttaatgatgatgttaattataatatgtg 38227680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 9509630 - 9509389
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||| ||| ||||||||| ||||||||||    
T  9509630 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacc-tgaactcgcc 9509532  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||||||||||| ||||||| ||||||||||| ||    
T  9509531 acggcgaggagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-agattttgcgacctttgttgcaagagttgtcgagagttgaacctt 9509433  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||| ||| |||  |||||||||||||||||||||||||||||||    
T  9509432 gggatagcattaagacttaatgaggatgttaattataatctgtg 9509389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 3564044 - 3564279
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttggat-tctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||| ||||||||  ||||||| ||||||||||    
T  3564044 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttggaaatctgacc-tgaactcgcc 3564141  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    || ||||||| | |||||||||||||||||||||||||||||||||| ||||||| | ||||| |||||||||||||||||||||| |||||| ||| ||    
T  3564142 acagcgagcaaatgctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgttaagagtttaacctt 3564241  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataa 236  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  3564242 ggggtagtattgagacttaatgatgatgttaattataa 3564279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 12699273 - 12699032
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| |||| |||| ||||||||||||| | ||||||||||  ||| ||||||||| ||||||||||    
T  12699273 cctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaaagattgttgaatgaaactcgtgggattctgacc-tgaactcgcc 12699175  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    ||||||||||||||||||| ||||| |||||||||||||||| |||| ||||||| ||||| | ||||||||||||||||||||| || |||||||| ||    
T  12699174 acggcgagcagaggctctcacctcgtgagtgacccagaaacaaagtgacttgttaggtttt-gcgacctttgttgcacgagttgtcgatagttgaacctt 12699076  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||||  || ||||||||||||||||||||||||||||    
T  12699075 ggggtagtattaagagttaatgaggatgttaattataatctgtg 12699032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 15143717 - 15143957
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttg-gattctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||| |||||| |||||||||| || |||||||    
T  15143717 cctgaacatgtctaataatgattaggaaagattttagaatgagattgaacctggaaagattttagaatgaa-cttttgtgattctgacc-tgtactcgcc 15143814  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    | |||||||||||||||||||||||||||||||| |||||||||||| ||||||| | ||||| |||||||||||||||||||| | |||||||||| |     
T  15143815 atggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgctaagagttgaacctc 15143914  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgt 241  Q
    ||||||||| |  |||||||||| |||||| | ||||||||||    
T  15143915 ggggtagtactaagacttaatgatgatgtttaatataatctgt 15143957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 44116945 - 44116741
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||| ||| ||||| |||||||||||||     
T  44116945 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacccggaaagatttagaatgaaactttgggaatctga-cctgaactcgccat 44116847  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg-ttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||||||||||||||||||||||||||| |||  |||||  | || | ||| | ||||| || |||| |||||||||| |||||| ||||||| |||    
T  44116846 ggcgagcagaggctctcgcctcgcgagtgactcagttacagaacg-ctagtttaggattttgcgatctttattgcacgagtcgttgagggttgaaccttg 44116748  T
Q  200 gggtagt 206  Q
    |||||||    
T  44116747 gggtagt 44116741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 16385938 - 16386168
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||          | |||||| ||| ||||| ||| |||||||||||    
T  16385938 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtgggattctaacc-tgaactcgcca 16386026  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||||||||||| |||||||  |||||||||| ||     
T  16386027 cggcgagcagtggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttgcgacctttgttgcatgagttgtccagagttgaaccttt 16386125  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||  |||  |||||||||| || ||||| |||||||||||    
T  16386126 gggtaacattaagacttaatgaagaggttaactataatctgtg 16386168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 40443818 - 40443589
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    |||       |||| ||| ||||||||| |||||||||||    
T  40443818 cctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacctggaa----tta-------acttgtgggattctgacc-tgaactcgcca 40443731  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||  | ||||| ||||||||||||||||||||| ||||| |||||  |     
T  40443730 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttatt-ggattttgcgacctttgttgcacgagttgtcgagagatgaaccctt 40443632  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||| |||  |||||||  | || |||||||||||||||||    
T  40443631 gggtaggattaagacttaacaatgaggttaattataatctgtg 40443589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 27847524 - 27847754
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||          | |||||| ||| ||| ||||| |||||||||||    
T  27847524 cctgaacatgtctaattatgattaggaaagaatttaggatgagattgaacctggaa----------ttaaacttatgggattttgacc-tgaactcgcca 27847612  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||| |||||||||||||||||||||||||||||| |||||||||| |||||| || ||||| ||||||||||||||||||||| |||||||||||  |     
T  27847613 cggcaagcagaggctctcgcctcgcgagtgacccaaaaacagagtgacttgtt-agattttgcgacctttgttgcacgagttgtcgagagttgaaccctt 27847711  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||| |||  |||||||| | ||  |||| |||||||||||    
T  27847712 gggtaggattaagacttaataatgagattaactataatctgtg 27847754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 93 - 242
Target Start/End: Complemental strand, 10589386 - 10589238
Alignment:
Q  93 ctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttg 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||||| |||||||||||||  |||||||    
T  10589386 ctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttgcgaccttttttgcacgagttgtctagagttg 10589288  T
Q  193 aactttggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
     || || |||||| |||  |||||||||| || |||||||||||||||||    
T  10589287 gacctttgggtaggattaagacttaatgatgaggttaattataatctgtg 10589238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 26212426 - 26212196
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||| | |||||| |||||| ||| ||||||||| ||||||||          |||||||| || | |||||||| |||||||||||    
T  26212426 cctgaacatgtctaatatttattaggtaagaatgtaggatgagattgaacctggaa----------tgaaacttgtgaggttctgacc-tgaactcgcca 26212338  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccag-aaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||  ||||||   ||||| |||||||||||||||||||||||||  || ||| ||    
T  26212337 cggcgagtagaggctctcgcctcgcgagtgacccagaaaacagagtgatttgtta--gttttgcgacctttgttgcacgagttgttgaggattaaacctt 26212240  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
     |||||| |||  |||||||||| || |||||||||||||||||    
T  26212239 tgggtagcattaagacttaatgaagaggttaattataatctgtg 26212196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 17061640 - 17061845
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| ||| |||||||| |||||||  || ||||| ||||||||||| |    
T  17061640 cctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaataaaactttgagaatctga-cctgaactcgcga 17061738  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg-ttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
     |||||| ||||||||||||||||||||||||| |   ||||| || |||| ||| | ||||| || |||||| |||||||| ||||||||||||||  |    
T  17061739 tggcgagtagaggctctcgcctcgcgagtgacctatttacagaatg-cttgtttaggattttgcgatctttgtcgcacgagtcgttgagagttgaaccat 17061837  T
Q  199 ggggtagt 206  Q
    ||||||||    
T  17061838 ggggtagt 17061845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 28504981 - 28505106
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||| ||| | || |||||||  ||||||||||    
T  28504981 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaatctgacc--gaactcgcca 28505078  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  28505079 tggcgagcagaggctctcgcctcgcgag 28505106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 39267326 - 39267447
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||| | || |||||  ||||||||||||    
T  39267326 cctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctga--ctgaactcgcca 39267423  T
Q  100 cggcgagcagaggctctcgcctcg 123  Q
     |||||||||||||||||||||||    
T  39267424 tggcgagcagaggctctcgcctcg 39267447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 18302619 - 18302494
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggat--tctgaccctgaactcgcc 98  Q
    ||||||||||||||||| | ||||||||||||| ||| ||||||||| ||||||||||| |||||||||||| |||||||  |||||  |||||||||||    
T  18302619 cctgaacatgtctaatatttattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaac-tttggataatctga--ctgaactcgcc 18302523  T
Q  99 acggcgagcagaggctctcgcctcgcgag 127  Q
    | |||||||||||||||||||||||||||    
T  18302522 atggcgagcagaggctctcgcctcgcgag 18302494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 34201223 - 34201099
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgccac 100  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| ||||| ||||| ||||||||||| ||| | || |||||  ||||||||||||     
T  34201223 ctgaacatgtctaataatgatcaagaaagaatttagaatgagattgaacctgtaaagacttagaatgaaaatttggagaatctga--ctgaactcgccat 34201126  T
Q  101 ggcgagcagaggctctcgcctcgcgag 127  Q
    |||||||||||||||| ||||||||||    
T  34201125 ggcgagcagaggctcttgcctcgcgag 34201099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 15754567 - 15754689
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatg-aaacttttg-gattctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| | |||||||| ||||||||| || |||||||  ||||| |||    
T  15754567 cctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaaaaacttagaatgaaaacttttgagaatctgacc--gaacttgcc 15754664  T
Q  99 acggcgagcagaggctctcgcctcg 123  Q
    |||||||||| ||||||||||||||    
T  15754665 acggcgagcataggctctcgcctcg 15754689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 9751230 - 9751355
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||| ||| ||||||||||| ||||||||||||||| | || | |||  ||||||||||||    
T  9751230 cctgaacatgtctaatattgattaggaaagaatgtaggatgaggttgaacctggaaagacttagaatgaaactttggagaatttga--ctgaactcgcca 9751327  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     || ||||||||||||||||||||||||    
T  9751328 tggtgagcagaggctctcgcctcgcgag 9751355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 12756397 - 12756601
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||    || ||||||||  |||||||  |||| ||||||||| |||     
T  12756397 cctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattatttaagaatgaactttttggaagctga-cctgaactcaccat 12756495  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg-ttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||| |||||||||||||||||||||  ||||   ||| |  | |||| ||| | ||||| || |||||| |||||||| |||||||||||||| |||    
T  12756496 ggcgagtagaggctctcgcctcgcgagttgcccaattaca-aaagccttgtttaggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttg 12756594  T
Q  200 gggtagt 206  Q
    |||||||    
T  12756595 gggtagt 12756601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 2831986 - 2832110
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||| |||| |||||| |||||||||| |||| | || ||||||  ||||||| |||    
T  2831986 cctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctagaaagacttagaatgaa-ctttggagaatctgac--tgaactcacca 2832082  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  2832083 tggcgagcagaggctctcgcctcgcgag 2832110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 3 - 207
Target Start/End: Original strand, 12255473 - 12255677
Alignment:
Q  3 tgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgccacg 101  Q
    ||||||||| ||||||||||||||||||| | |||| |||||||| |||||||| || || ||||||||  ||| ||| |   ||| |||||||||||      
T  12255473 tgaacatgtataataatgattaggaaagattctagattgagattgaacctggaatagtttaagaatgaatttttgggagttacacc-tgaactcgccata 12255571  T
Q  102 gcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagt-ttttgtgacctttgttgcacgagttgttgagagttgaactttgg 200  Q
    ||||| |||||||||||||||||||||  |||||  ||||| || |||||| ||  ||||| || ||||||  ||||||||||||||||||||| |||||    
T  12255572 gcgagtagaggctctcgcctcgcgagtttcccagttacagaatg-cttgtttaggattttgcgatctttgtcacacgagttgttgagagttgaattttgg 12255670  T
Q  201 ggtagta 207  Q
    |||||||    
T  12255671 ggtagta 12255677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 810809 - 810936
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaag-atttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||| ||||||||||||||||||||| |  ||||| |||||| |||||||||| |||||||||| || |||||    |||  |||||||||||||    
T  810809 cctgaacatatctaataatgattaggaaagattggagaataagattgaacctggaaagaatttagaatg-aatttttgtgaactgtacctgaactcgcca 810907  T
Q  100 cggcgagcagaggctctcgcctcgcgagt 128  Q
     |||||| |||||||||||||||||||||    
T  810908 tggcgagtagaggctctcgcctcgcgagt 810936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 44014615 - 44014489
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||||||||||| ||||||||| || |||||     ||  |||||||||||||    
T  44014615 cctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatg-aatttttgttagttgcacctgaactcgcca 44014517  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     || ||| ||||||||||||||||||||    
T  44014516 tggtgagtagaggctctcgcctcgcgag 44014489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 16056769 - 16056576
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||| ||||||||| ||||||||| |||||| |||||||| |||||||| || || |||||| |  ||| ||| |   ||| |||||||||||    
T  16056769 cctgaacatgtataataatgaataggaaagattttagattgagattgaacctggaatagtttaagaatggatttttgggaattacacc-tgaactcgcca 16056671  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtt-tttgtgacctttgttgcacgagttgttgagagttga 193  Q
      ||||| ||||||||||||||||||||| ||||||  ||||| || ||||||| |||   || || |||||| |||||||||| || |||||||    
T  16056670 tagcgagtagaggctctcgcctcgcgagttacccagttacagaatgccttgttaggttaaatgcgatctttgtagcacgagttgatgtgagttga 16056576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 22073357 - 22073223
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||| ||||||||||||| ||||| | ||||||||||||| |||| ||| || || |||||| |  ||| ||| |   ||| |||||||||||    
T  22073357 cctgaacatgtgtaataatgattagaaaagattctagaatgagattgaacctagaatagtttaagaatggatttttgggagttacacc-tgaactcgcca 22073259  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccag 135  Q
     |||||| |||||| |||||||||||||| ||||||    
T  22073258 tggcgagtagaggccctcgcctcgcgagttacccag 22073223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 2279798 - 2280000
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||  ||||||||||||||||||| |||||| |||||||| ||||| || || || ||||||  | |||||| |  |   |||||||||||||    
T  2279798 cctgaacatgcataataatgattaggaaagattttagattgagattgaacctgtaatagtttaagaatg-gatttttgggtgttacacctgaactcgcca 2279896  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg-ttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
      ||||| |||||| ||||||||||||||  || ||  | ||| || |||| ||| | ||||| || ||||||  |||||||||||||||||||||| ||    
T  2279897 tagcgagtagaggccctcgcctcgcgagttgcctagttatagaatg-cttgtttaggattttgcgatctttgtcacacgagttgttgagagttgaacctt 2279995  T
Q  199 ggggt 203  Q
    |||||    
T  2279996 ggggt 2280000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 16219408 - 16219523
Alignment:
Q  13 taataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgccacggcgagcagag 111  Q
    ||||||||||||||||||| |||||| |||||||| |||||||| || || ||||||||  ||| ||| | |   | ||||||||||| |||||| ||||    
T  16219408 taataatgattaggaaagattttagattgagattgaacctggaatagtttaagaatgaatttttgggagt-tacacgtgaactcgccatggcgagtagag 16219506  T
Q  112 gctctcgcctcgcgagt 128  Q
    || ||||||||||||||    
T  16219507 gccctcgcctcgcgagt 16219523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 11995762 - 11995835
Alignment:
Q  53 ggaaagatttagaatgaaacttttg-gattctgaccctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||| ||||||||||| ||| | || ||||||  ||||||||||| ||| |||||||||||||||||||||||    
T  11995762 ggaaagacttagaatgaaaatttggagaatctgac--tgaactcgccatggcaagcagaggctctcgcctcgcgag 11995835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 68187 - 68132
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa 56  Q
    |||||| |||||||||||||||||||||||| |  ||| |||||||| ||||||||    
T  68187 cctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaa 68132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 127
Target Start/End: Original strand, 9389462 - 9389501
Alignment:
Q  88 ctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  9389462 ctgaactcgccatggcgagtagaggctctcgcctcgcgag 9389501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 12719001 - 12718966
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12719001 actcgccacggcgagcagatgctctcgcctcgcgag 12718966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 12723912 - 12723877
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12723912 actcgccacggcgagcagatgctctcgcctcgcgag 12723877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 16906974 - 16907009
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16906974 actcgccacggcgagcagatgctctcgcctcgcgag 16907009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 18279736 - 18279701
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  18279736 actcgccacggcgagcagatgctctcgcctcgcgag 18279701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 18283699 - 18283664
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  18283699 actcgccacggcgagcagatgctctcgcctcgcgag 18283664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21064842 - 21064897
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa 56  Q
    |||||||||||  |||||||||||||||| | ||||||||||||||| || |||||    
T  21064842 cctgaacatgtacaataatgattaggaaatattttagaatgagattgaacttggaa 21064897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 68099 - 68061
Alignment:
Q  89 tgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  68099 tgaactcgccatggcgagtagaggctctcgcctcgcgag 68061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 11995738 - 11995768
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaaga 31  Q
    |||||||||||||||||||||||||||||||    
T  11995738 cctgaacatgtctaataatgattaggaaaga 11995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 47832249 - 47832219
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaaga 31  Q
    |||||||||||||||||||||||||||||||    
T  47832249 cctgaacatgtctaataatgattaggaaaga 47832219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12901846 - 12901793
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctgg 54  Q
    ||||||||||| |||||||||||||| |||  |||||| |||||||| ||||||    
T  12901846 cctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 12901793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 16324445 - 16324392
Alignment:
Q  3 tgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa 56  Q
    ||||||||||||||||||||||||||||| |  ||  |||||||| ||||||||    
T  16324445 tgaacatgtctaataatgattaggaaagattggagtttgagattgaacctggaa 16324392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2529657 - 2529709
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctg 53  Q
    |||||| |||| |||||||||||||| |||  |||||| ||||||||||||||    
T  2529657 cctgaatatgtataataatgattaggcaagtttttagattgagattggacctg 2529709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 179; Significance: 1e-96; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 18438975 - 18438734
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgga-ttctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||| |||||||| |||| | ||||    
T  18438975 cctgaacatgtctaataatgattaggaaagaatgtaaaatgagattgaacctggaaagatttagaatgaaacttttggaattctgacc-tgaagttgcca 18438877  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| |||    
T  18438876 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagttgttgagtgttgaaccttg 18438777  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||| |||||||||| |||||||| |||||||||||    
T  18438776 gggtagtattgagacttaatgatgatgttaactataatctgtg 18438734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 26687324 - 26687087
Alignment:
Q  5 aacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgccacgg 102  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||| ||| ||||||||| ||||||||||||||    
T  26687324 aacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacc-tgaactcgccacgg 26687226  T
Q  103 cgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgggg 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   |||||||||||||||| | |||||||||||||||||||||    
T  26687225 cgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggttttac-gacctttgttgcacgaatcgttgagagttgaactttgggg 26687127  T
Q  203 tagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26687126 tagtattgggacttaatgaggatgttaattataatctgtg 26687087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 11424443 - 11424684
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggat-tctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||| ||  ||||||| |||||||||||    
T  11424443 cctgaacatgtctaataatgattaggaaataatgtagaatgagattgaacctggaaagatttagaatgaaactttttgaactctgacc-tgaactcgcca 11424541  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  11424542 cggcgagtagaggctctcgcctcgcgagcgacctagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaactttg 11424641  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||| |||||||||  |||||||||| |||||||||    
T  11424642 gggtagtattgagacttaatgttgatgttaattttaatctgtg 11424684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 25476065 - 25476306
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttggattctgaccctgaactcgcca 99  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| | |||||||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  25476065 cctgaacatgtctaataatgattatgaaagaatgtagaatgagatcgaacctggaaagattttagaatgaaacttttggaatctgacc-tgaactcgcca 25476163  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    || |||| |||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||||||||||||||||||||||||||||| |||    
T  25476164 cgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagttgaaccttg 25476263  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
     |||||||||| |||||||||||||||||||||| ||||||||    
T  25476264 aggtagtattgagacttaatgaggatgttaattacaatctgtg 25476306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 40213401 - 40213641
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||||  ||| ||| ||| ||| |||||||||||    
T  40213401 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaacttttgggaatctaacc-tgaactcgcca 40213499  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||||||||||||||||||||||||| ||| |||    
T  40213500 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagtttaaccttg 40213599  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgt 241  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  40213600 gggtagtattgagacttaatgatgatgttaattataatctgt 40213641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 14573029 - 14572788
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggat-tctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| ||||||  ||||||| |||||||||||    
T  14573029 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagacttagaatgaaacctttggaaatctgacc-tgaactcgcca 14572931  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
     |||||| ||||||||||||||||||||||||| |||||||||||  ||||||| ||||||| ||||||||||||||||||||||||||||||||| |||    
T  14572930 tggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtaccttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttg 14572831  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||  |||||||||| ||||||||||||||| ||||    
T  14572830 gggtagtattaagacttaatgatgatgttaattataatttgtg 14572788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 14576513 - 14576754
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggat-tctgaccctgaactcgcca 99  Q
    |||||||||||||||| |||||||| ||||||| |||||||| |||| ||||||||||| |||||||||||| ||||||  ||||||| ||||| |||||    
T  14576513 cctgaacatgtctaattatgattagaaaagaatgtagaatgacattgaacctggaaagacttagaatgaaacctttggaaatctgacc-tgaacacgcca 14576611  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||| ||||||||||||||||||||||||| ||||||| |||| ||||||| | ||||| ||||||||||||||||||||||||||||||||| |||    
T  14576612 cggcgagtagaggctctcgcctcgcgagtgacctagaaacaaagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagttgaaccttg 14576711  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||  || ||||||| ||||||||||||||||||||    
T  14576712 gggtagtattaagatttaatgatgatgttaattataatctgtg 14576754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 17488298 - 17488056
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaactttt-ggattctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||| | ||||||||||| |||| |||||    
T  17488298 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtaggattctgacc-tgaaatcgcc 17488200  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaa-cagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactt 197  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| | ||||| ||||||||||||||||||||| ||||||||||| |    
T  17488199 acggcgagcagaggctctcgcctcgcgagtgacctagaaaacagagtgccttgtta-gattttgcgacctttgttgcacgagttgtcgagagttgaacct 17488101  T
Q  198 tggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||| ||| |||  |||||||||| ||||||||||||||||||||    
T  17488100 tgggatagcattaagacttaatgatgatgttaattataatctgtg 17488056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 13442715 - 13442474
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||| ||| ||| ||||||||| ||||||||||||| ||||||||||||| ||| ||||||||| |||||| |||    
T  13442715 cctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacc-tgaacttgcc 13442617  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||||||||||||||||||| ||||||||||| ||    
T  13442616 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-agattttgcgacctttgttgcacgagttgtcgagagttgaacctt 13442518  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||| |   |||  |||||||||| ||||||||||||||||||||    
T  13442517 gggatgacattaagacttaatgatgatgttaattataatctgtg 13442474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 8 - 242
Target Start/End: Original strand, 23083048 - 23083282
Alignment:
Q  8 atgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaactttt-ggattctgaccctgaactcgccacggcgag 106  Q
    |||||||||| ||||||||| | ||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||    
T  23083048 atgtctaatagtgattaggacaaaatgtaggatgagattggacctggaaagatttagaatgaaactttttggattctgacccttaactcgccatggcgag 23083147  T
Q  107 cagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggggtagt 206  Q
     ||||||||||||||||||| ||||||||||||| ||||||||||| || ||||| |||||||||||||||||||||| |||||||||| ||| ||||||    
T  23083148 tagaggctctcgcctcgcgaatgacccagaaacatagtgtcttgtt-aggttttgcgacctttgttgcacgagttgttcagagttgaaccttgaggtagt 23083246  T
Q  207 attgggacttaatgaggatgttaattataatctgtg 242  Q
    |||  |||||| ||| ||||||||||| ||||||||    
T  23083247 attaagacttagtgatgatgttaattacaatctgtg 23083282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 17499780 - 17499538
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaactt-ttggattctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||||| |||| |||||    
T  17499780 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgttggattctgacc-tgaattcgcc 17499682  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaa-cagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactt 197  Q
    |||| ||||||||||||||||||| | ||||||| ||||| ||||||| ||||||| | ||||| ||||||||||||||||||||| ||||||||||| |    
T  17499681 acggtgagcagaggctctcgcctctctagtgacctagaaaacagagtgccttgtta-gattttgcgacctttgttgcacgagttgtcgagagttgaacct 17499583  T
Q  198 tggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||| ||| |||  |||||||||| ||||||||||||||| ||||    
T  17499582 tgggatagcattaagacttaatgatgatgttaattataatttgtg 17499538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 14973295 - 14973057
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttgga-ttctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  ||| | |||||||| |||| ||| |||||||| |||||||| ||||||||||    
T  14973295 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattaaaccagaaaagattttagaaagaa-cttttggaattctgacc-tgaactcgcc 14973198  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| | ||||| ||  | ||| |||| ||||| | |||||||||| ||    
T  14973197 acggcgagcagaggctctcgcctcgcaagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgctaagagttgaacctt 14973098  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatct 239  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  14973097 ggggtagtattgagacttaatgatgatgttaattataatct 14973057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 44 - 242
Target Start/End: Complemental strand, 43841330 - 43841132
Alignment:
Q  44 attggacctggaaagatt-tagaatgaaacttttgga-ttctgaccctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacag 141  Q
    |||| ||||||||||||| ||||||||||||| |||| |||||||| |||||||||||| ||||||| |||| |||||||||||||||||||||||||||    
T  43841330 attgaacctggaaagattgtagaatgaaacttgtggaattctgacc-tgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacccagaaacag 43841232  T
Q  142 agtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggggtagtattgggacttaatgaggatgttaattataatctgt 241  Q
    |||||||||||| ||||| | |||||||||| ||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43841231 agtgtcttgttaggtttt-gcgacctttgttacacgagttgttgagagtttgactttggggtagtattgggacttaacgaggatgttaattataatctgt 43841133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 2 - 242
Target Start/End: Original strand, 20698128 - 20698357
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgccac 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||          |||||||| ||| ||||||||| ||||||||||||    
T  20698128 ctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------tgaaacttgtgggattctgacc-tgaactcgccac 20698216  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||||||| ||||||||||| ||||||||||| || |    
T  20698217 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttgcgacctttgtggcacgagttgtcgagagttgaacctttg 20698315  T
Q  201 ggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    | ||| |||  |||||||||| ||||||||||||||||||||    
T  20698316 gatagaattaagacttaatgatgatgttaattataatctgtg 20698357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 17247966 - 17248168
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||| ||| ||||| |||||||||||||    
T  17247966 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaatctga-cctgaactcgcca 17248064  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaag-tttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
     |||||||||||||||||||||||||||||||||||  ||||| || |||||| ||  ||||| || |||||| |||||||| |||||||||| ||| ||    
T  17248065 tggcgagcagaggctctcgcctcgcgagtgacccagttacagaatg-cttgtttagaattttgcgatctttgtcgcacgagtcgttgagagttaaacctt 17248163  T
Q  199 ggggt 203  Q
    |||||    
T  17248164 ggggt 17248168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 53070379 - 53070583
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||   ||| ||||||||  |||||||  |||| |||||||||||||     
T  53070379 cctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaattaagaatgaactttttggaagctga-cctgaactcgccat 53070477  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg-ttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||| |||||||||||||||||||||  ||||   |||||  | |||| ||| | ||||| || |||||| |||||||| |||||||||||||| |||    
T  53070478 ggcgagtagaggctctcgcctcgcgagttgcccaattacaga-agccttgtttaggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttg 53070576  T
Q  200 gggtagt 206  Q
    |||||||    
T  53070577 gggtagt 53070583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12340193 - 12340068
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||| | || ||| |  ||||||||||||    
T  12340193 cctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctaa--ctgaactcgcca 12340096  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  12340095 tggcgagcagaggctctcgcctcgcgag 12340068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 12852044 - 12852169
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||| | ||||||||| |||||||||||||||||  | |||||  ||||||||||||    
T  12852044 cctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaatctggaaagacttagaatgaaacttttgataatctga--ctgaactcgcca 12852141  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||| ||||||||||    
T  12852142 tggcgagcagaggctcttgcctcgcgag 12852169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 12933990 - 12934117
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||||||||||| |||||||||||| |||||    |||| |||||||||||||    
T  12933990 cctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattttagaatgaaa-ttttgtgaactgaacctgaactcgcca 12934088  T
Q  100 cggcgagcagaggctctcgcctcgcgagt 128  Q
     ||||||||||| ||||||||||||||||    
T  12934089 tggcgagcagagactctcgcctcgcgagt 12934117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14666046 - 14665921
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    |||||||||| |||||| ||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||| | || |||||  |||||||||| |    
T  14666046 cctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctga--ctgaactcgcaa 14665949  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  14665948 tggcgagcagaggctctcgcctcgcgag 14665921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14669201 - 14669076
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||| ||| ||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||| | || |||||  ||||||||||||    
T  14669201 cctgaacatgtctaatattgaataggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctga--ctgaactcgcca 14669104  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     ||||||||||||||||| |||||||||    
T  14669103 tggcgagcagaggctctcacctcgcgag 14669076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14735559 - 14735434
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    |||||||||| |||||| ||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||| | || |||||  |||||||||| |    
T  14735559 cctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctga--ctgaactcgcaa 14735462  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  14735461 tggcgagcagaggctctcgcctcgcgag 14735434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 49667763 - 49667890
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||||||||||| |||||||||||| | |||    |||| |||||||||||||    
T  49667763 cctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattttagaatgaaa-tattgtgaactgaacctgaactcgcca 49667861  T
Q  100 cggcgagcagaggctctcgcctcgcgagt 128  Q
     ||||||||||||||||||||||||||||    
T  49667862 tggcgagcagaggctctcgcctcgcgagt 49667890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 30030268 - 30030039
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaac--ttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||| |||||||| | | ||||||||| ||||||||          ||||||  ||| | |||||||||   |||||||||    
T  30030268 ctgaacatgtctaataatgattacgaaagaatgtgggatgagattgaacctggaa----------tgaaacagtttggaattctgacct--aactcgcca 30030181  T
Q  100 cggcgagcagaggctctcgcctcgcgagtga-cccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
     |||||||||||||||||||||||||||| | ||||||| |||| || ||||||| | ||||| ||||||||||||||||||||| ||||||||||| ||    
T  30030180 tggcgagcagaggctctcgcctcgcgagtaatcccagaa-cagaatgccttgtta-gattttgcgacctttgttgcacgagttgtcgagagttgaacctt 30030083  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
     ||||||  ||  |||||||||| |||||| | |||||| ||||    
T  30030082 tgggtagctttaagacttaatgatgatgtttaatataatatgtg 30030039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 32308109 - 32307983
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||| ||||||||||||||||||||| |  |||||||||||| |||| | |||| |||||||||||  ||||||   |||| |||||||||||||    
T  32308109 cctgaacatatctaataatgattaggaaagattggagaatgagattgaacctaggaagactttagaatgaa--ttttgggaactgaacctgaactcgcca 32308012  T
Q  100 cggcgagcagaggctctcgcctcgcgagt 128  Q
     ||||||||||||||||||||||||||||    
T  32308011 tggcgagcagaggctctcgcctcgcgagt 32307983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 242
Target Start/End: Complemental strand, 42386850 - 42386611
Alignment:
Q  3 tgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgccacgg 102  Q
    ||||||||  |||||||||||||| |||| |||||| || ||||| ||||| ||   || ||||||||||||||||    |   ||||||||||||| ||    
T  42386850 tgaacatgcataataatgattaggcaagactttagactgtgattgaacctgaaatagttaagaatgaaacttttgggagttatacctgaactcgccatgg 42386751  T
Q  103 cgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagt-ttttgtgacctttgttgcacgagttgttgagagttgaactttggg 201  Q
    |||| |||||||||| ||||||||||  ||||   |||||  | |||||| ||  ||||| || |||||| ||||||||||||| ||||||||| |||||    
T  42386750 cgagtagaggctctcacctcgcgagttgcccaattacagaa-gccttgtttaggattttgcgaactttgtcgcacgagttgttgtgagttgaaccttggg 42386652  T
Q  202 gtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||||||||  | | ||||||||| ||||||||||    
T  42386651 gtagtattgggacttgtttatgatgttaatgataatctgtg 42386611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 9513351 - 9513228
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||||| ||||| |||||||||||| |||||    || | ||||||||| |||    
T  9513351 cctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaatgaaatttttgtgaactaaacctgaactcacca 9513252  T
Q  100 cggcgagcagaggctctcgcctcg 123  Q
     |||||||||||||||||||||||    
T  9513251 tggcgagcagaggctctcgcctcg 9513228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 9521326 - 9521203
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||||| ||||| |||||||||||| |||||    || | ||||||||| |||    
T  9521326 cctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaatgaaatttttgtgaactaaacctgaactcacca 9521227  T
Q  100 cggcgagcagaggctctcgcctcg 123  Q
     |||||||||||||||||||||||    
T  9521226 tggcgagcagaggctctcgcctcg 9521203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 1644363 - 1644489
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||| ||||||||||||||||| |  |||||||||||| |||||  |||| |||||||||||  || || |  |||| |||||||||||||    
T  1644363 cctgaacatgtctgataatgattaggaaagattagagaatgagattgaacctgagaagactttagaatgaattttgtgaa--ctgaacctgaactcgcca 1644460  T
Q  100 cggcgagcagaggctctcgcctcgcgagt 128  Q
     ||||||||||||||||||||||||||||    
T  1644461 tggcgagcagaggctctcgcctcgcgagt 1644489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 49389324 - 49389446
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||||||| ||| |||||||||||  |||||    |||| |||||||||||||    
T  49389324 cctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaa--ttttgtgaactgaacctgaactcgcca 49389421  T
Q  100 cggcgagcagaggctctcgcctcgc 124  Q
     |||||||||||| |||||||||||    
T  49389422 tggcgagcagaggttctcgcctcgc 49389446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14179763 - 14179693
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaa 71  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||| |||||||||||    
T  14179763 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaaagacttagaatgaaa 14179693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 12399636 - 12399409
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||| ||| ||| ||| | ||| ||||||||          |||||||| || | |||||||| |||||||||||    
T  12399636 cctgaacatgtctaataatgattaggaaaaaatataggatgggtttgaacctggaa----------tgaaacttgtgaggttctgacc-tgaactcgcca 12399548  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||| | ||||||||||||| ||||||||||||||||||  || |||||||   ||||  ||||||||||||||||||||||| |  || | | ||     
T  12399547 cggcgagtaaaggctctcgcctcacgagtgacccagaaacag--tgacttgttag--ttttccgacctttgttgcacgagttgttggggattaagccttt 12399452  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||| |||  ||| |||||| || ||||| |||||||||||    
T  12399451 gggtagcattaagacataatgaagaggttaactataatctgtg 12399409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 13210012 - 13210133
Alignment:
Q  5 aacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatg-aaacttttg-gattctgaccctgaactcgccacgg 102  Q
    ||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||| |||||||| ||||| ||| || | |||||  |||||||||| ||    
T  13210012 aacatgtctaata-tgattaggaaagaaagtagaatgagattgaacctggaaagacttagaatgaaaactcttgagaatgtgacc--gaactcgccatgg 13210108  T
Q  103 cgagcagaggctctcgcctcgcgag 127  Q
    |||| ||||||||||||||||||||    
T  13210109 cgagtagaggctctcgcctcgcgag 13210133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 113 - 242
Target Start/End: Complemental strand, 16796875 - 16796747
Alignment:
Q  113 ctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggggtagtattggg 212  Q
    ||||||||||||||||||||| ||||||||||| ||||| | |  |||| |||||||||||||||| ||||| |||||||||| || |||||| |||  |    
T  16796875 ctctcgcctcgcgagtgacccggaaacagagtgccttgtga-gactttgcgacctttgttgcacgaattgttaagagttgaacctttgggtagcattaag 16796777  T
Q  213 acttaatgaggatgttaattataatctgtg 242  Q
    ||||||||| || | |||||||||| ||||    
T  16796776 acttaatgaagaggctaattataatatgtg 16796747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 4588495 - 4588569
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttt 75  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||| ||||| |||||||||||||||    
T  4588495 cctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctgtaaagacttagaatgaaacttt 4588569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 16097770 - 16097645
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    |||||||||||||||||| ||||||||||| |  |||||||||||| ||||| ||||| |||||||||||  |||  || | ||  |||||||||||||     
T  16097770 ctgaacatgtctaataattattaggaaagattggagaatgagattgaacctgaaaagattttagaatgaatttttgtgaat-tggacctgaactcgccat 16097672  T
Q  101 ggcgagcagaggctctcgcctcgcgag 127  Q
    || ||| ||||||||||||||||||||    
T  16097671 ggtgagtagaggctctcgcctcgcgag 16097645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 16104221 - 16104095
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||| ||| |||||| |||| |||||| ||||  || || ||  |||  | ||||||| |     
T  16104221 cctgaacatgtctaataatgattaggaaagattggagaatgaggttgaacctgggaagactttagattgaattttgtgaat--tgaatccgaactcgtcg 16104124  T
Q  100 cggcgagcagaggctctcgcctcgcgagt 128  Q
     ||||||||||||||||||||||| ||||    
T  16104123 tggcgagcagaggctctcgcctcgtgagt 16104095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 324676 - 324549
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    |||||| |||| ||||||||||||||||||| | ||||||||||||| ||   ||| || || ||||||||  ||| ||| | ||  |||||||||||||    
T  324676 cctgaatatgtataataatgattaggaaagattgtagaatgagattgaactgagaatagtttaagaatgaatttttgggagt-tgcacctgaactcgcca 324578  T
Q  100 cggcgagcagaggctctcgcctcgcgagt 128  Q
      ||||| |||||||||||||||||||||    
T  324577 tagcgagtagaggctctcgcctcgcgagt 324549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 43842619 - 43842573
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattg 47  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  43842619 cctgagcatgtctaataatgattaggaaagaatgtaggatgagattg 43842573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 52523493 - 52523613
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagt-ttttgtgacctttgttgcacgagttgttg 185  Q
    |||||||||||||  ||||| |||||| |||||||  |||||  |||||  ||||| || |||||| ||  ||||| || |||||| ||||||||  |||    
T  52523493 cctgaactcgccatagcgagtagaggccctcgcctgacgagttgcccagttacagaatg-cttgtttaggattttgcgatctttgtcgcacgagtcattg 52523591  T
Q  186 agagttgaactttggggtagta 207  Q
    ||||||||||||||||||||||    
T  52523592 agagttgaactttggggtagta 52523613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 12340033 - 12339985
Alignment:
Q  160 tgtgacctttgttgcacgagttgttgagagttgaactttggggtagtat 208  Q
    ||||| |||||| ||||||||||||||||||||||| || |||||||||    
T  12340033 tgtgatctttgtcgcacgagttgttgagagttgaacctttgggtagtat 12339985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 17247203 - 17247239
Alignment:
Q  4 gaacatgtctaataatgattaggaaagaatttagaat 40  Q
    |||||||||||||||||||||||||||||| ||||||    
T  17247203 gaacatgtctaataatgattaggaaagaatgtagaat 17247239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 7110034 - 7109999
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7110034 actcgccacggcgagcagatgctctcgcctcgcgag 7109999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 7113969 - 7113934
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7113969 actcgccacggcgagcagatgctctcgcctcgcgag 7113934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 22322000 - 22321965
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22322000 actcgccacggcgagcagatgctctcgcctcgcgag 22321965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 22337055 - 22337020
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22337055 actcgccacggcgagcagatgctctcgcctcgcgag 22337020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 27409417 - 27409452
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27409417 actcgccacggcgagcagatgctctcgcctcgcgag 27409452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 12171797 - 12171827
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaaga 31  Q
    |||||||||||||||||||||||||||||||    
T  12171797 cctgaacatgtctaataatgattaggaaaga 12171827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 14501640 - 14501578
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattta 63  Q
    |||||| |||| |||||||||||||| |||  |||||| ||||||||||||||| ||| ||||    
T  14501640 cctgaatatgtataataatgattaggcaaggttttagattgagattggacctgggaaggttta 14501578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 37250932 - 37251050
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtt-tttgtgacctttgttgcacgagttgttg 185  Q
    |||||||||||||  ||||| |||||||||||||||||||||  |||||  |||||    ||||||| |||    ||||||||||| |||||||||| ||    
T  37250932 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaacaccttgttaggttaaaagtgacctttgtcgcacgagttgatg 37251031  T
Q  186 agagttgaactttggggta 204  Q
     ||||||| ||| ||||||    
T  37251032 tgagttgatcttgggggta 37251050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 45797684 - 45797622
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattta 63  Q
    |||||| |||| |||||||||||||| |||  |||||| ||||||||||||||| ||| ||||    
T  45797684 cctgaatatgtataataatgattaggtaagtttttagattgagattggacctgggaaggttta 45797622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 1465175 - 1465215
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||||||| |||| |||||| ||||||||||||||||||||    
T  1465175 cctgaacttgccatggcgagtagaggctctcgcctcgcgag 1465215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 12171865 - 12171909
Alignment:
Q  82 ctgaccctgaactcgccacggcgagcagaggctctcgcctcgcga 126  Q
    |||| |||||||| |||| |||||| |||||||||||||||||||    
T  12171865 ctgaacctgaactggccatggcgagtagaggctctcgcctcgcga 12171909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 22110116 - 22110156
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||||||||||||  ||||| ||||||||||||||||||||    
T  22110116 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 22110156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 37250793 - 37250845
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctgg 54  Q
    |||||||||| |||||||||||||| |||  |||||| |||||||| ||||||    
T  37250793 ctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 37250845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 175; Significance: 3e-94; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 21985827 - 21986068
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgga-ttctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  21985827 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaacttttggaattctgacc-tgaactcgcca 21985925  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||    
T  21985926 cggcaagcagaggccctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttg 21986025  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||  ||||| |||| |||||||| |||||| ||||    
T  21986026 gggtagtattcagacttgatgatgatgttaactataatttgtg 21986068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 24494009 - 24493768
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaactttt-ggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  24494009 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatttagaatgaaactttttggattctgacc-tgaactcgcca 24493911  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||||||||||| |||||||| |||| ||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||    
T  24493910 cggcgagcagaggctttcgcctcgtgagtaacccataaacagagtgtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttg 24493811  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||  |||||||| | ||||||||||||||||||||    
T  24493810 gggtagtattaagacttaataatgatgttaattataatctgtg 24493768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 13095935 - 13095694
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  13095935 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagatttagaatgaaacttgtgggattctgacc-tgaactcgcca 13095837  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    | |||||||||||| |||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||||||| |||||||||||||| |||    
T  13095836 cagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgacttgttaggtttttgcgacctttgttgcacgagtcgttgagagttgaaccttg 13095737  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||  |||||||||| ||||||||||||||| ||||    
T  13095736 gggtagtattaagacttaatgatgatgttaattataatatgtg 13095694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 13025751 - 13025510
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  13025751 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagatttagaatgaaacttgtgggattctgacc-tgaactcgcca 13025653  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    | ||||||| |||| |||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||| |||    
T  13025652 cagcgagcaaaggccctcgcctcgcgagtgacctagaaacagagtgacttgttaggtttttgcgacctttgttgcacgatttgttgagagttgaaccttg 13025553  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||  |||||||||| ||||||||||||||| ||||    
T  13025552 gggtagtattaagacttaatgatgatgttaattataatatgtg 13025510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 24529662 - 24529420
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgga-ttctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||| || |||||||||||||||||| |||||| | ||||||||||    
T  24529662 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaggttgtagaatgaaacttttggaattctgatc-tgaactcgcc 24529564  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| ||| |||||||||||||| ||    
T  24529563 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcactagtagttgagagttgaacctt 24529464  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||||  ||||||||| |||||||| |||||||||||    
T  24529463 ggggtagtattgaaacttaatgatgatgttaactataatctgtg 24529420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 9078393 - 9078152
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaac-ttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  9078393 cctgaacatgtctaataatgattaggaaaaaatgtagaatgagattgaacctggaaagatttagaatgaaaccttttgaattctgacc-tgaactcgcca 9078295  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| || || ||| |||| ||||||| || ||||||| |||    
T  9078294 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttgttaagggttgaaccttg 9078195  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  9078194 gggtagtattgagacttaatgatgatgttaattataatctgtg 9078152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 25421973 - 25421732
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggat-tctgaccctgaactcgcca 99  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||  ||||||  |||||||||||    
T  25421973 cctgaacatgtctattaatgattaggaaagaacttaggatgagattggacctggaaagatttagaatgaaactttcggaaatctgact-tgaactcgcca 25421875  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||||| ||||||| | ||||| ||||||||||||||||||||||||||||||||| |||    
T  25421874 cggcgagtagaggctctcgcctcgcgagtgacctagaaaccgagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagttgaaccttg 25421775  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||| |||| |||||||||| ||||||||||||||||||||    
T  25421774 gggtagcattgagacttaatgatgatgttaattataatctgtg 25421732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 25431835 - 25431594
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggat-tctgaccctgaactcgcca 99  Q
    ||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||  |||||||||||    
T  25431835 cctgaacatgtttattaatgattaggaaagaatttaggatgagattggacctggaaagatttagaatgaaacttttggaaatctgact-tgaactcgcca 25431737  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||| |||||||||| ||||||||||||||||||||  ||||| ||||||| | ||||| |||||||||| |||||||||||||||||||||| |||    
T  25431736 cggcgagtagaggctctcacctcgcgagtgacccagaaatcgagtgccttgttaggattttgcgacctttgttacacgagttgttgagagttgaaccttg 25431637  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
     ||||| |||| |||||||||| ||||||||||||||||||||    
T  25431636 aggtagcattgagacttaatgatgatgttaattataatctgtg 25431594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 23390176 - 23390417
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||| ||| ||||||||| ||||||||||    
T  23390176 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacc-tgaactcgcc 23390274  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    | |||||| ||||||| ||||||| ||||||||||  |||||||||| ||||||| | ||||||||||||||||||||||||||| ||||||||||| ||    
T  23390275 atggcgagtagaggctatcgcctcacgagtgaccctaaaacagagtgccttgtta-gattttgtgacctttgttgcacgagttgtcgagagttgaacctt 23390373  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||| |||||||  |||||||||||||||||||||||||||||||    
T  23390374 gggatagtattaagacttaatgaggatgttaattataatctgtg 23390417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 1096908 - 1096673
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttggat-tctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| | |||||||||||  |||||||| ||||||||  ||||||| ||||||||||    
T  1096908 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaaagattgcagaatgaa-cttttggaaatctgacc-tgaactcgcc 1096811  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    |||||||| ||||||||||||||||||||||||||||||||||| || ||| |||   ||||| || || ||| |||| ||||||| | ||||| || ||    
T  1096810 acggcgagtagaggctctcgcctcgcgagtgacccagaaacagaatgcctttttagaattttgcgatctctgtcgcacaagttgttaaaagttggacctt 1096711  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataa 236  Q
    |||||||||||| |||||||||||||||||||||||||    
T  1096710 ggggtagtattgagacttaatgaggatgttaattataa 1096673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 4 - 235
Target Start/End: Original strand, 8286536 - 8286756
Alignment:
Q  4 gaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgccacgg 102  Q
    ||||||||||||||||||||| |||||||| ||| ||||||||| ||||||||          |||||||| ||| ||||||||| | |||| |||| ||    
T  8286536 gaacatgtctaataatgattaagaaagaatgtaggatgagattgaacctggaa----------tgaaacttgtgggattctgacc-taaactagccatgg 8286624  T
Q  103 cgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgggg 202  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||||||||||  ||||||||||||||||||| || |||    
T  8286625 cgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttgcgacctttgttgcttgagttgttgagagttgaacctttggg 8286723  T
Q  203 tagtattgggacttaatgaggatgttaattata 235  Q
    |||||||  |||||||||| |||||||||||||    
T  8286724 tagtattaagacttaatgaagatgttaattata 8286756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 11580925 - 11581130
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| ||| |||||||| |||||||  || ||||| |||||||||||||    
T  11580925 cctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaataaaactttgagaatctga-cctgaactcgcca 11581023  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg-ttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
     ||||||||||||||||||||||||||||||||||   ||||| || |||| ||| | ||||| || |||||| | |||||| |||||||||||||| ||    
T  11581024 tggcgagcagaggctctcgcctcgcgagtgacccatttacagaatg-cttgtttaggattttgcgatctttgtcgtacgagtcgttgagagttgaacctt 11581122  T
Q  199 ggggtagt 206  Q
    ||||||||    
T  11581123 ggggtagt 11581130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 21292661 - 21292891
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgga-ttctgaccctgaactcgcca 99  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||||| ||||||||          | |||||| |||| |||||||| |||||||||||    
T  21292661 cctgaacatgtctaataataattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggaattctgacc-tgaactcgcca 21292749  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||| || || ||||| ||||||||||||||||||||| | |||||| ||  |     
T  21292750 cggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgactt-tttagattttgcgacctttgttgcacgagttgtcgggagttggaccctt 21292848  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||| |||  |||||||| | || |||||||||||||||||    
T  21292849 gggtaggattaagacttaataatgaggttaattataatctgtg 21292891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 22075449 - 22075219
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    |||||||||||||||||||||||||| |||||| ||| |||| | || ||||||||          |||||||| || | |||||||| |||||||||||    
T  22075449 cctgaacatgtctaataatgattaggtaagaatgtaggatgaaaatgaacctggaa----------tgaaacttgtgaggttctgacc-tgaactcgcca 22075361  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccag-aaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||   ||||| |||||||||||||||||||||||||  || ||| ||    
T  22075360 cggcgagcagaggctctcgcctcgcgagtgacccagaaaacagagtgacttgtta--gttttgcgacctttgttgcacgagttgttgaggattaaacctt 22075263  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
     |||||| |||  |||||||||| || |||||||||||| ||||    
T  22075262 tgggtagcattaagacttaatgaagaggttaattataatatgtg 22075219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 36154510 - 36154713
Alignment:
Q  3 tgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgccacg 101  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| ||||||| ||| |||||||| |||||||  || ||||| ||||||||||||| |    
T  36154510 tgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctggatagattttagaataaaactttgagaatctga-cctgaactcgccatg 36154608  T
Q  102 gcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg-ttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgg 200  Q
    ||||| ||||||||||||||||||||||||| |   ||||| || |||| ||| | ||||| || |||||| |||||||| |||||||||||||| ||||    
T  36154609 gcgagtagaggctctcgcctcgcgagtgacctatttacagaatg-cttgtttaggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgg 36154707  T
Q  201 ggtagt 206  Q
    ||||||    
T  36154708 ggtagt 36154713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 22107064 - 22107294
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||| ||||||||||||||| ||| | ||||||| ||||| ||          | |||||| ||| ||||||||| ||||||| |||    
T  22107064 cctgaacatgtctaatattgattaggaaagaatgtaggacgagattgaacctgaaa----------ttaaacttgtgggattctgacc-tgaactcacca 22107152  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
     ||||||||||||||||||||||||||||||||| |||| |||||| ||||| |   ||| | ||||||||||||||||||||||||||| ||||| ||     
T  22107153 tggcgagcagaggctctcgcctcgcgagtgacccggaaatagagtgccttgtgatacttt-gcgacctttgttgcacgagttgttgagagatgaaccttt 22107251  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    | ||||||||  |||||||||| || |||||||||||||||||    
T  22107252 gagtagtattaagacttaatgaagaggttaattataatctgtg 22107294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22119873 - 22119998
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||| | || |||||  ||||||||||||    
T  22119873 cctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctga--ctgaactcgcca 22119970  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  22119971 tggcgagcagaggctctcgcctcgcgag 22119998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 19660517 - 19660643
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg--gattctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||  ||||||||||| |||||||||||  ||||  || ||| |||  |||||||||    
T  19660517 cctgaacatgtctaataatgattaggaaagaatgtggaatgagattaaacctggaaagacttagaatgaaaactttggagaatctaacc--gaactcgcc 19660614  T
Q  99 acggcgagcagaggctctcgcctcgcgag 127  Q
    | |||||||||||||||||||||||||||    
T  19660615 atggcgagcagaggctctcgcctcgcgag 19660643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 24767017 - 24767142
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||| |||||| |||||||| ||| ||||||||| | ||||||||| ||||||||||||||| | || |||||  ||||||||| ||    
T  24767017 cctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatctggaaagacttagaatgaaactttggagaatctga--ctgaactcgtca 24767114  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  24767115 tggcgagcagaggctctcgcctcgcgag 24767142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22959213 - 22959339
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||||||| ||| |||||||||||  |||  ||  |||| |||||||||||||    
T  22959213 cctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaatttttgtgaa-ctgaacctgaactcgcca 22959311  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||| ||||||||||||||||||||    
T  22959312 tggcgagtagaggctctcgcctcgcgag 22959339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 21565985 - 21565863
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||||||||||| |||||||||||  ||   || | ||  |||||||||||||    
T  21565985 cctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaattttcgtgaat-tgtacctgaactcgcca 21565887  T
Q  100 cggcgagcagaggctctcgcctcg 123  Q
     |||||||||||||||||||||||    
T  21565886 tggcgagcagaggctctcgcctcg 21565863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 22144491 - 22144292
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattta-gaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||| ||| ||||||||||||||| | |||| |||||||| ||||||||  ||||| ||||| |  ||| ||| |   ||| |||||||||||    
T  22144491 cctgaacatgtgtaacaatgattaggaaagattctagattgagattgaacctggaataatttaagaatggatttttgggagttacacc-tgaactcgcca 22144393  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg-ttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
      ||||| |||||||||||||||||||||  |||||  ||||| || |||| ||| | ||||| || |||||| ||||||||||||||||||||||| ||    
T  22144392 tagcgagtagaggctctcgcctcgcgagttgcccagttacagaatg-cttgtttaggattttgcgatctttgtcgcacgagttgttgagagttgaacctt 22144294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 21871251 - 21871377
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttg-gattctgaccctgaactcgcc 98  Q
    ||||||||||| || |||||||||||||||| | ||| ||||||||| ||||||||||||| | |||||  ||||||| |||||||| |||| |||||||    
T  21871251 cctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaaagattatggaatg-gacttttgtgattctga-cctgtactcgcc 21871348  T
Q  99 acggcgagcagaggctctcgcctcgcgag 127  Q
    | |||||| |||||||| || ||||||||    
T  21871349 atggcgagtagaggctcccggctcgcgag 21871377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 21875531 - 21875657
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttg-gattctgaccctgaactcgcc 98  Q
    ||||||||||| || |||||||||||||||| | ||| ||||||||| ||||||||||||| | |||||  ||||||| |||||||| |||| |||||||    
T  21875531 cctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaaagattatggaatg-gacttttgtgattctga-cctgtactcgcc 21875628  T
Q  99 acggcgagcagaggctctcgcctcgcgag 127  Q
    | |||||| |||||||| || ||||||||    
T  21875629 atggcgagtagaggctcccggctcgcgag 21875657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 19669340 - 19669219
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    |||||||||||||||||||||||||||||| |   ||||||||||| || |||||||| |||||||||||  ||||| || | ||  |||||||||||||    
T  19669340 ctgaacatgtctaataatgattaggaaagattggggaatgagattgaacgtggaaagactttagaatgaattttttgtgaat-tgtacctgaactcgcca 19669242  T
Q  100 cggcgagcagaggctctcgcctc 122  Q
     |||| | |||||||||||||||    
T  19669241 tggcgtgtagaggctctcgcctc 19669219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 5888855 - 5888981
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||| ||| | || |||||||||||||| | |||| |||||||| || ||||| || || |||||||| ||||  || | ||  |||||||||||||    
T  5888855 cctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacatggaatagtttaagaatgaatctttgtgagt-tgcacctgaactcgcca 5888953  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||| ||||||||||||||||||||    
T  5888954 tggcgagtagaggctctcgcctcgcgag 5888981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 20026706 - 20026746
Alignment:
Q  88 ctgaactcgccacggcgagcagaggctctcgcctcgcgagt 128  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  20026706 ctgaactcgccacagcgagtagaggctctcgcctcgcgagt 20026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 21501920 - 21501968
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 135  Q
    |||||||||||||  ||||| ||||||||||||||||||||| ||||||    
T  21501920 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccag 21501968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 19472493 - 19472528
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  19472493 actcgccacggcgagcagatgctctcgcctcgcgag 19472528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 20296180 - 20296145
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  20296180 actcgccacggcgagcagatgctctcgcctcgcgag 20296145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 127
Target Start/End: Complemental strand, 31342453 - 31342414
Alignment:
Q  88 ctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  31342453 ctgaactcgccatggcgagcagatgctctcgcctcgcgag 31342414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 25744074 - 25744036
Alignment:
Q  89 tgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  25744074 tgaactcgccatggcgagtagaggctctcgcctcgcgag 25744036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 123074 - 123114
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||| |||||||| |||||||||| ||||||||||||||||    
T  123074 cctgtactcgccatggcgagcagatgctctcgcctcgcgag 123114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 21741309 - 21741345
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcg 123  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  21741309 cctgaactcgccatggcgagtagaggctctcgcctcg 21741345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 23201720 - 23201680
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||| |||||||| |||||||||| ||||||||||||||||    
T  23201720 cctgtactcgccatggcgagcagatgctctcgcctcgcgag 23201680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 174; Significance: 1e-93; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 23076881 - 23076642
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  23076881 cctgaacatgtctaataataattaggaaagaatgtaggatgagattggacctggaaagatttagaatgaaactttggaattctgacc-tgaactcgccac 23076783  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgg 200  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| ||||||| ||||| | ||||||||||||||||||||||||||||||||||||||    
T  23076782 ggcgagtagaggctctcgcctcgcgagttacccagaaacagagtgccttgttaggtttt-gcgacctttgttgcacgagttgttgagagttgaactttgg 23076684  T
Q  201 ggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||||| || |||| ||||||||||||||||||||    
T  23076683 ggtagtattgggattttatgatgatgttaattataatctgtg 23076642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 23660463 - 23660227
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  23660463 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaacttttggaatctgacc-tgaactcgcca 23660365  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||| ||||||||||||| |||    
T  23660364 cggcgagcagaggctctcgcctcgtgagtgacccagaaacagagtgccttgttaggtttttgtgacctttattgcacgagttattgagagttgaaccttg 23660265  T
Q  200 gggtagtattgggacttaatgaggatgttaattataat 237  Q
    ||||||||||| |||||| ||| |||||||||||||||    
T  23660264 gggtagtattgagacttattgatgatgttaattataat 23660227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 3 - 242
Target Start/End: Complemental strand, 22337554 - 22337315
Alignment:
Q  3 tgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgga-ttctgaccctgaactcgccacg 101  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||| || |||||||| |||| ||||||||    
T  22337554 tgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatttagaatgaaactttttgagttctgacc-tgaattcgccacg 22337456  T
Q  102 gcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggg 201  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||     
T  22337455 gcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgtgacctttgttgcacgagttgttgagagttgaaccttgga 22337356  T
Q  202 gtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||  |||||||||| ||||||||||||||| ||||    
T  22337355 gtagtattaagacttaatgatgatgttaattataatttgtg 22337315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 22737860 - 22738101
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||||| |||| |||||||| ||||||||||||| ||| ||||||| | ||||||||||    
T  22737860 cctgaacatatctaataatgattaggaaagaatgtaggatgagattgaacctagaaagattgtagaatgaaacttgtgggattctgaac-tgaactcgcc 22737958  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||| | |||||||||||||||||||||||||| |||||| ||    
T  22737959 acggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggtttt-gcgacctttgttgcacgagttgttgagaattgaacctt 22738057  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||||  |||||||||||||||||||||||||||||||    
T  22738058 ggggtagtattaagacttaatgaggatgttaattataatctgtg 22738101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 298495 - 298735
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaactt-ttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||| | ||||||||| |||||||||||||    
T  298495 cctgaacatgtctaataatgattaggaaagaatataggatgagattgaacctggaaagatttagaatgaaacttgtgggattctga-cctgaactcgcca 298593  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||| || ||||| |||||||||||||||||||||||||  || ||| ||     
T  298594 cggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttgcgacctttgttgcacgagttgttgaggattaaaccttt 298692  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||| |||  |||||||||| || ||||| |||||| ||||    
T  298693 gggtagcattaagacttaatgaagaggttaactataatatgtg 298735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 27754012 - 27753775
Alignment:
Q  5 aacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgccacgg 102  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||| ||| ||||||||| ||||||||||||||    
T  27754012 aacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacc-tgaactcgccacgg 27753914  T
Q  103 cgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgggg 202  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||| |||||| |||||||||||||| ||||||||||  |||||     
T  27753913 cgagcagaggctctcgcctcgcaagtgacccagaaacagagtgccttgtt-agattttgcgaccttcgttgcacgagttgtcgagagttgaagcttggga 27753815  T
Q  203 tagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||| |||  |||||||||| ||||||||||||||| ||||    
T  27753814 tagcattaagacttaatgatgatgttaattataatatgtg 27753775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 22730913 - 22731155
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaactt-ttggattctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||| | ||||||||| ||||||||||||    
T  22730913 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctga-cctgaactcgcc 22731011  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaa-ctt 197  Q
    |||| ||||| ||||||||||||| ||||| |||||||||||||||| |||||| || ||||| || |||||||||||||| |||||| | ||||| |||    
T  22731012 acggggagcaaaggctctcgcctcacgagtcacccagaaacagagtgccttgtt-aggttttgcgatctttgttgcacgagctgttgataattgaacctt 22731110  T
Q  198 tggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
     |||||||||||  |||||||||||||||||||||||||||||||    
T  22731111 gggggtagtattaagacttaatgaggatgttaattataatctgtg 22731155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 32451609 - 32451813
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    ||||||||||| ||||||||||||||| ||||| ||| ||||||||| || |||||||||| ||||||||||||| ||| ||||||||| ||||||||||    
T  32451609 cctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacatggaaagattgtagaatgaaacttgtgggattctgacc-tgaactcgcc 32451707  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||||||||||||||||||| ||||| ||||| ||    
T  32451708 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttgcgacctttgttgcacgagttgtcgagagatgaacctt 32451806  T
Q  199 ggggtag 205  Q
    |||||||    
T  32451807 ggggtag 32451813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 23286290 - 23286061
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgccac 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| || |||||          ||||| || || |||| ||||| ||||||||||||    
T  23286290 ctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacatggaa----------tgaaaattgtgagattatgacc-tgaactcgccac 23286202  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgg 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||| || ||||| ||||||||||||| ||||||||||||||||||| || |    
T  23286201 ggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt-agattttgcgacctttgttgcatgagttgttgagagttgaacctttg 23286103  T
Q  201 ggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||  |||||||||| ||||||||||||||||||||    
T  23286102 ggtagtattaagacttaatgaagatgttaattataatctgtg 23286061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 37807 - 38034
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    |||||||||||||||||||||||||||||  || ||| ||||||||| ||||||||          | |||||| || |||||| ||| |||||||||||    
T  37807 cctgaacatgtctaataatgattaggaaaagatgtaggatgagattgaacctggaa----------ttaaacttgtgagattctaacc-tgaactcgcca 37895  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| |||||| ||  |||| ||||||||||||||||||||| ||||||||||| ||     
T  37896 cggcgagcagaggctctcgcctcgcgagcgacccagaaacatagtgacttgtt-agactttgcgacctttgttgcacgagttgtcgagagttgaaccttt 37994  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatct 239  Q
    |||||| |||  |||||||  | || ||||||||||||||    
T  37995 gggtaggattaagacttaacaatgaggttaattataatct 38034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 8 - 242
Target Start/End: Complemental strand, 20309528 - 20309305
Alignment:
Q  8 atgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgccacggcgag 106  Q
    |||||||||||||||||||||||||| ||| ||||||||| ||||||||          | |||||| ||| ||||||||| |||||||||||||| |||    
T  20309528 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtgggattctgacc-tgaactcgccacggtgag 20309440  T
Q  107 cagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggggtagt 206  Q
    |||||||||||||||||||||||||||||||||| |||| |||||| || ||||| |||| ||||||||||| |||| |||||||||||  | ||||||     
T  20309439 cagaggctctcgcctcgcgagtgacccagaaacaaagtgacttgtt-agattttgcgacccttgttgcacgatttgtcgagagttgaacccttgggtagg 20309341  T
Q  207 attgggacttaatgaggatgttaattataatctgtg 242  Q
    |||  |||||||  | || ||||| |||||||||||    
T  20309340 attaagacttaagaatgaggttaactataatctgtg 20309305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 23071643 - 23071768
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||| ||| | || |||||||  ||||||||||    
T  23071643 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaatctgacc--gaactcgcca 23071740  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  23071741 tggcgagcagaggctctcgcctcgcgag 23071768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 23654090 - 23654307
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||    ||| | ||     || ||||||||||  ||||||||||||    
T  23654090 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----ttaaactg-----ttgggattctgact-tgaactcgccac 23654179  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgg 200  Q
    ||||||||             |||||||||||||||||||||||| ||||||| | ||||| ||||||||||||||||||||| ||||||||||| || |    
T  23654180 ggcgagca-------------cgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagttgtcgagagttgaacctttg 23654265  T
Q  201 ggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||| |||  |||||||||| || |||||||||||||||||    
T  23654266 ggtagcattaagacttaatgaagaggttaattataatctgtg 23654307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 137 - 237
Target Start/End: Complemental strand, 23060815 - 23060717
Alignment:
Q  137 aacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggggtagtattgggacttaatgaggatgttaattataa 236  Q
    ||||||||| ||||||| ||||| | |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  23060815 aacagagtgccttgttaggtttt-gcgacctttgtt-cacgagttgttgagaattgaactttggggtagtattgggacttaatgatgatgttaattataa 23060718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 28406420 - 28406297
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||| ||||||||||| |  |||||||||||| ||||| |||||||| ||||| ||| |||  ||  |||| |||||||||||||    
T  28406420 cctgaacatgtctaataataattaggaaagattggagaatgagattgaacctgtaaagattttagaataaaattttgtgaa-ctgaacctgaactcgcca 28406322  T
Q  100 cggcgagcagaggctctcgcctcgc 124  Q
     |||||| |||||||||||||||||    
T  28406321 tggcgagtagaggctctcgcctcgc 28406297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 22133897 - 22134020
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| |||| | |||| |||||||||||  |||||    ||||  ||||||||||||    
T  22133897 cctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctaggaagactttagaatgaa--ttttgtgaactga-actgaactcgcca 22133993  T
Q  100 cggcgagcagaggctctcgcctcgcga 126  Q
     ||||||||||||||||||||||||||    
T  22133994 tggcgagcagaggctctcgcctcgcga 22134020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 87 - 203
Target Start/End: Original strand, 23708384 - 23708500
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg-ttaagtttttgtgacctttgttgcacgagttgttg 185  Q
    |||||||||||||  ||||| |||||||||||||| |||||| ||||||  ||||| || |||| ||| | ||||| || |||||| |||||||||||||    
T  23708384 cctgaactcgccatagcgagtagaggctctcgccttgcgagttacccagttacagaatg-cttgtttaggattttgcgatctttgtcgcacgagttgttg 23708482  T
Q  186 agagttgaactttggggt 203  Q
    | |||||||| |||||||    
T  23708483 atagttgaaccttggggt 23708500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28291982 - 28292027
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagatt 46  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||    
T  28291982 cctgaacatgtctaagaatgattaggaaagaatgtagaatgagatt 28292027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 22740730 - 22740768
Alignment:
Q  89 tgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  22740730 tgaactcgccacggcgagcagatgctctcgcctcgcgag 22740768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 12901286 - 12901321
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12901286 actcgccacggcgagcagatgctctcgcctcgcgag 12901321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 24628252 - 24628287
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  24628252 actcgccacggcgagcagatgctctcgcctcgcgag 24628287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 24649689 - 24649654
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  24649689 actcgccacggcgagcagatgctctcgcctcgcgag 24649654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 27379206 - 27379241
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27379206 actcgccacggcgagcagatgctctcgcctcgcgag 27379241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 27383252 - 27383287
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27383252 actcgccacggcgagcagatgctctcgcctcgcgag 27383287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 27602129 - 27602094
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27602129 actcgccacggcgagcagatgctctcgcctcgcgag 27602094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 41530783 - 41530818
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  41530783 actcgccacggcgagcagatgctctcgcctcgcgag 41530818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 19672112 - 19672068
Alignment:
Q  157 ttttgtgacctttgttgcacgagttgttgagagttgaactttggg 201  Q
    ||||| || |||||| ||||||||||||||||||||||| |||||    
T  19672112 ttttgcgatctttgtcgcacgagttgttgagagttgaaccttggg 19672068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 31756268 - 31756232
Alignment:
Q  91 aactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  31756268 aactcgccatggcgagtagaggctctcgcctcgcgag 31756232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 172; Significance: 2e-92; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 23406822 - 23406581
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| ||| ||||||||| ||||||||||    
T  23406822 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagattgtagaatgaaacttgtgggattctgacc-tgaactcgcc 23406724  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||| ||||||||||||||||    
T  23406723 acggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggtttt-gtgacctttgttgcacgagttattgagagttgaacttt 23406625  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||| || |||||||||||||||||||||||||||||||| ||||    
T  23406624 gggataatattgggacttaatgaggatgttaattataatatgtg 23406581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 18818090 - 18818330
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||| ||| ||| ||||||||| ||||||||||||| || |||||||||||||| |||||||| |||||||||||    
T  18818090 cctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtaaaatgaaacttttggtttctgacc-tgaactcgcca 18818188  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||| |||     
T  18818189 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgtt-aggttttgcgacctttgttgcacgagttgttgagagttgaaattta 18818287  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||  |||||||||||||||||||||||||||||||    
T  18818288 gggtagtattaagacttaatgaggatgttaattataatctgtg 18818330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 22627176 - 22626935
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| |||| |||||||| ||||||||| |||| | | |||||||| ||||| ||||    
T  22627176 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctcgaaagattgtagaatgaacctttggaaatctgaccc-gaacttgcca 22627078  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||    
T  22627077 cggcgagcagaggctctcgcctcgcgagtgatctagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttg 22626978  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  22626977 gggtagtattgagacttaatgaggatgttaattataatctgtg 22626935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 2 - 242
Target Start/End: Original strand, 21923609 - 21923849
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaactttt-ggattctgaccctgaactcgccac 100  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  21923609 ctgaacatgtctaataatgattaggacagaatgtaggatgagattgaacctgaaaagatttagaatgaaactttttggattctgaccctgaactcgccac 21923708  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgg 200  Q
    || |||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| |||||||||||| ||||| |||||||||||||| |||     
T  21923709 ggtgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-aggttttgcgacctttgttgcccgagtagttgagagttgaaccttga 21923807  T
Q  201 ggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||  |||||||||| ||||||||||||||||||||    
T  21923808 ggtagtattaagacttaatgatgatgttaattataatctgtg 21923849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 28648724 - 28648965
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaac-ttttggattctgaccctgaactcgcca 99  Q
    |||||||||||||||||||||||| |||||||| ||| ||||||||| || ||||||||||||||||||||| ||||| ||| ||||| |||||||||||    
T  28648724 cctgaacatgtctaataatgattatgaaagaatgtaggatgagattgaacatggaaagatttagaatgaaaccttttgaattttgacc-tgaactcgcca 28648822  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||||||||||||||| |||  |||||||||||||||||| ||||||| | ||||| ||||||||||||||||||||||||||||||||| |||    
T  28648823 cggcgagcagaggctctcgccttgcgcatgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagttgaaccttg 28648922  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||    
T  28648923 gggtagtattgagacttaatgatgatgttaattataatatgtg 28648965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 20536649 - 20536408
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||| ||| ||||||||| ||||||||||    
T  20536649 cctgaacatgtctgataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttatgggattctgacc-tgaactcgcc 20536551  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| ||||| | ||||||||||||||||||||| ||| ||||||| ||    
T  20536550 acggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgacttattaggtttt-gcgacctttgttgcacgagttgtcgagtgttgaacctt 20536452  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||||  |||||||||||||||||||||||||||||||    
T  20536451 ggggtagtattaagacttaatgaggatgttaattataatctgtg 20536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 23648993 - 23648754
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaac-ttttgga-ttctgaccctgaactcgcca 99  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||| |||||||||||| ||||||| ||||||||  ||||||||||    
T  23648993 ctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctgaaaagacttagaatgaaacattttggaattctgacc--gaactcgcca 23648896  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
     ||||| ||||||||||||||||| |||| |||||||||||||||| ||||||| |||| || ||||||||||||||||||||||||||||||||| |||    
T  23648895 tggcgatcagaggctctcgcctcgtgagtaacccagaaacagagtgacttgttaggtttatgcgacctttgttgcacgagttgttgagagttgaaccttg 23648796  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgt 241  Q
    ||||||||||  ||| |||||| |||||||||||||||||||    
T  23648795 gggtagtattaagacctaatgatgatgttaattataatctgt 23648754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 3 - 242
Target Start/End: Complemental strand, 6759696 - 6759456
Alignment:
Q  3 tgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttggat-tctgaccctgaactcgccac 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| || |||||| |||| |||||||||||||||||  ||||||| ||||||||||||    
T  6759696 tgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaaatattttagaatgaaacttttggaaatctgacc-tgaactcgccac 6759598  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||  | || ||| |||| ||||| | |||||||||| ||||    
T  6759597 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggattttgcaatctgtgtcgcacaagttgctaagagttgaaccttgg 6759498  T
Q  201 ggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||| |||||||||| ||||||||||||||||||||    
T  6759497 ggtagtattgagacttaatgatgatgttaattataatctgtg 6759456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 18878917 - 18879158
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||| ||| ||||||||| ||||||||||    
T  18878917 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacc-tgaactcgcc 18879015  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    | | ||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| | ||||||||||||||||||| ||||||||||| ||    
T  18879016 aagacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-agattttgcggcctttgttgcacgagttgtcgagagttgaacctt 18879114  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||| ||| ||   |||||||||| |||||||| |||||||||||    
T  18879115 gggatagcatcaagacttaatgatgatgttaactataatctgtg 18879158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 3 - 237
Target Start/End: Original strand, 16092023 - 16092257
Alignment:
Q  3 tgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgga-ttctgaccctgaactcgccacg 101  Q
    ||||||||||||||||||||||||||||||| ||||||||||||  ||||| ||||||||| ||  ||||||||||| |||||||| |||||||||||||    
T  16092023 tgaacatgtctaataatgattaggaaagaatgtagaatgagattaaacctgaaaagatttaaaaaaaaacttttggaattctgacc-tgaactcgccacg 16092121  T
Q  102 gcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggg 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||| | ||||| | ||||| || || |||  ||| ||||||| |||||||||| |||||    
T  16092122 gcgagcagaggctctcgcctcccgagtgacccagaaacagagtgccctgttaggattttgcgatctgtgtcacacaagttgttaagagttgaaccttggg 16092221  T
Q  202 gtagtattgggacttaatgaggatgttaattataat 237  Q
    ||| ||||| ||||||| || |||||||||||||||    
T  16092222 gtaatattgagacttaaggatgatgttaattataat 16092257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 22875502 - 22875265
Alignment:
Q  5 aacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttggattctgaccctgaactcgccacggc 103  Q
    ||||||| ||||||||||||||||||| | ||||| ||| ||| |||||||||||||| ||||||||||||| ||| ||||||| ||||||||||| | |    
T  22875502 aacatgtttaataatgattaggaaagattgtagaacgaggttgaacctggaaagattttagaatgaaactttgggaatctgacc-tgaactcgccatgac 22875404  T
Q  104 gagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggggt 203  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |  |||| || || ||| |||| ||||||| |||||||||| |||||||    
T  22875403 gagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagggctttgcgatctatgtcgcacaagttgttaagagttgaaccttggggt 22875304  T
Q  204 agtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||| ||  |||||  ||||||||||||||||||||    
T  22875303 agtattgagatgtaatggtgatgttaattataatctgtg 22875265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 41598625 - 41598420
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||| |||||||||||||||| ||| ||||| |||||||||||||    
T  41598625 cctgaacatgtctaataatgattatgaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaatctga-cctgaactcgcca 41598527  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg-ttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
     |||||||||||||||||||||||||||||||| ||  ||||| || |||| ||| | ||||| || |||||  |||||||| |||||||||||||| ||    
T  41598526 tggcgagcagaggctctcgcctcgcgagtgacctagttacagaatg-cttgtttaggattttgcgatctttgccgcacgagtcgttgagagttgaacctt 41598428  T
Q  199 ggggtagt 206  Q
    ||||||||    
T  41598427 ggggtagt 41598420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 7373190 - 7372970
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgga-ttctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| |||| |||| ||||||||||||| ||||||||||||| || | |||||||| ||||||||||    
T  7373190 cctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaaagattgtagaatgaaacttgtgaaattctgacc-tgaactcgcc 7373092  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    ||||||                     |||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||    
T  7373091 acggcg---------------------agtgacccagaaacagagtgtcttgttaggtttt-gcgacctttgttgcacgagttgttgagagttgaacttt 7373014  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||| ||| || |||||||||||||||||||||||||||||||    
T  7373013 ggggtggtagtgagacttaatgaggatgttaattataatctgtg 7372970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 2 - 242
Target Start/End: Original strand, 25362832 - 25363061
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgccac 100  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||||          |||||||| ||| ||||||||| |||||||||||     
T  25362832 ctgaacatgactaataatgattaggaaagaatgtaggatgagattgaacctggaa----------tgaaacttgtgggattctgacc-tgaactcgccat 25362920  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgg 200  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| |||| | ||  |||| ||||||| ||||||||||||||||||||||||| || |    
T  25362921 ggcgagcagaggctctcgcctcgagagtgacccggaaacagagtgccttg-tgagactttgcgacctttcttgcacgagttgttgagagttgaacctttg 25363019  T
Q  201 ggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||  |||||||||| || | |||||||||||||||    
T  25363020 ggtagtattaagacttaatgaagaggctaattataatctgtg 25363061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 21918690 - 21918874
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||| ||||||| ||| | ||||||| |||||||||         |||||||| ||| ||||||||| |||||||||||    
T  21918690 cctgaacatgtctaataatgattagaaaagaatgtaggaagagattgaacctggaaa---------tgaaacttgtgggattctgacc-tgaactcgcca 21918779  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaac 195  Q
     |||||||||||||||||||||||||||||||| |||||||||||| |||||| || ||||| ||||||||||||| ||||||| |||||||||||    
T  21918780 tggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt-agattttgcgacctttgttgcatgagttgtcgagagttgaac 21918874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 31971685 - 31971455
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    |||||||||||||||||||||||||||||| || ||| ||||||||| ||||||||          | |||||| || |||||||||| ||||||||||     
T  31971685 cctgaacatgtctaataatgattaggaaaggatgtaggatgagattgaacctggaa----------ttaaacttgtgagattctgacc-tgaactcgccc 31971597  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||||||||||| || ||||||||| |||||||||| |||||| |||||| || ||||| ||||||||||||||||||||| ||||| ||||| ||     
T  31971596 cggcgagcagaggctgtcacctcgcgagcgacccagaaatagagtgacttgtt-agattttgcgacctttgttgcacgagttgtcgagagctgaaccttt 31971498  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||| |||  |||||||  | || |||||||||||||||||    
T  31971497 gggtaggattaagacttaacaatgaggttaattataatctgtg 31971455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 5 - 242
Target Start/End: Original strand, 16199342 - 16199567
Alignment:
Q  5 aacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgccacggcg 104  Q
    ||||||||| ||||||||||||||||||| ||| ||||||||| ||||          ||||| ||||| | ||||||||||| |||||||||||| |||    
T  16199342 aacatgtcttataatgattaggaaagaatgtaggatgagattgaacct----------agaattaaactgtgggattctgacc-tgaactcgccacagcg 16199430  T
Q  105 agcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggggta 204  Q
    |||||| ||||||||||||||||||||||| |||||||||| ||| ||  | ||||| ||||||||||||||||||||| |||||||||||  | |||||    
T  16199431 agcagacgctctcgcctcgcgagtgacccaaaaacagagtgacttatt-ggattttgcgacctttgttgcacgagttgtcgagagttgaacccttgggta 16199529  T
Q  205 gtattgggacttaatgaggatgttaattataatctgtg 242  Q
    | |||  |||||||  | || |||||||||||||||||    
T  16199530 ggattaagacttaacaatgaggttaattataatctgtg 16199567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 5865957 - 5866082
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||| ||| | || |||||||  ||||||||||    
T  5865957 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaatctgacc--gaactcgcca 5866054  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  5866055 tggcgagcagaggctctcgcctcgcgag 5866082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 17141354 - 17141229
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||| ||| | || || ||||  ||||||||||    
T  17141354 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaatcagacc--gaactcgcca 17141257  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  17141256 tggcgagcagaggctctcgcctcgcgag 17141229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 21249818 - 21249697
Alignment:
Q  5 aacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgccacggc 103  Q
    ||||||||||||||||||||||||||||| ||| |||||| || ||||||||||| || |||||||| ||| | || |||||||  |||||||||| |||    
T  21249818 aacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagacttggaatgaaaatttggagaatctgacc--gaactcgccatggc 21249721  T
Q  104 gagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||||||||    
T  21249720 gagcagaggctctcgcctcgcgag 21249697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 21255656 - 21255535
Alignment:
Q  5 aacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgccacggc 103  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||| || |||||||| ||| | || |||||||  |||||||||| |||    
T  21255656 aacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagacttggaatgaaaatttggagaatctgacc--gaactcgccatggc 21255559  T
Q  104 gagcagaggctctcgcctcgcgag 127  Q
    |||||| |||||||||||||||||    
T  21255558 gagcagcggctctcgcctcgcgag 21255535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 21491433 - 21491308
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||| ||||||||||| ||| | || |||||||   |||| ||||    
T  21491433 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctagaaagacttagaatgaaaatttagagaatctgacc--aaacttgcca 21491336  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||| ||||||||| ||||||||||    
T  21491335 tggcgagtagaggctcttgcctcgcgag 21491308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 242
Target Start/End: Original strand, 45130793 - 45130919
Alignment:
Q  115 ctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggggtagtattgggac 214  Q
    ||||||||||||||||||||||||||||||| ||| ||| | ||||| ||||||||||||||||||||| |||||||| ||  | |||||| |||  |||    
T  45130793 ctcgcctcgcgagtgacccagaaacagagtgacttatta-gattttgcgacctttgttgcacgagttgtcgagagttggacccttgggtaggattaagac 45130891  T
Q  215 ttaatgaggatgttaattataatctgtg 242  Q
    ||||| | || |||||||||||||||||    
T  45130892 ttaataatgaggttaattataatctgtg 45130919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 21674146 - 21674021
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||||||||||| |||||||||||  |||  || | ||  |||||||||||||    
T  21674146 cctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatatttgtgagt-tgcacctgaactcgcca 21674048  T
Q  100 cggcgagcagaggctctcgcctcgcga 126  Q
     |||||| |||||| ||||||||||||    
T  21674047 tggcgagtagaggccctcgcctcgcga 21674021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 26355378 - 26355504
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||| ||| |  ||| |||||||| ||||||||||| |||||||||||  |||  || | ||  |||||||| ||||    
T  26355378 cctgaacatgtctaataatgattaggagagattgaagattgagattgaacctggaaagactttagaatgaatttttgtgaat-tgtacctgaacttgcca 26355476  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||| ||||||||||||||| ||||    
T  26355477 tggcgagtagaggctctcgcctcacgag 26355504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45130711 - 45130766
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa 56  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||    
T  45130711 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 45130766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 39834259 - 39834147
Alignment:
Q  15 ataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgccacggcgagcagaggc 113  Q
    ||||||||||||||||| | |||| |||||||| |||||||| || || |||||||| ||||  || | ||  ||||||||||||| |||||| ||||||    
T  39834259 ataatgattaggaaagattgtagattgagattgaacctggaatagtttaagaatgaatctttgtgagt-tgcacctgaactcgccatggcgagtagaggc 39834161  T
Q  114 tctcgcctcgcgag 127  Q
    ||||||||||||||    
T  39834160 tctcgcctcgcgag 39834147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19801107 - 19801162
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa 56  Q
    ||||||||||||||||||||||||||||||| |  ||||| |||||| ||||||||    
T  19801107 cctgaacatgtctaataatgattaggaaagactagagaataagattgaacctggaa 19801162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 43252145 - 43252110
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  43252145 actcgccacggcgagcagatgctctcgcctcgcgag 43252110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 38854931 - 38854961
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaaga 31  Q
    |||||||||||||||||||||||||||||||    
T  38854931 cctgaacatgtctaataatgattaggaaaga 38854961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 20499101 - 20499049
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctg 53  Q
    ||||||||||| |||||||||||||| |||  |||||| |||||||| |||||    
T  20499101 cctgaacatgtataataatgattaggtaagtttttagattgagattgaacctg 20499049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 21972353 - 21972393
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||| ||||||||||||||||||| ||||||||| ||||||    
T  21972353 cctgtactcgccacggcgagcagatgctctcgccccgcgag 21972393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 21976438 - 21976478
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||| ||||||||||||||||||| ||||||||| ||||||    
T  21976438 cctgtactcgccacggcgagcagatgctctcgccccgcgag 21976478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 23760520 - 23760548
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaa 29  Q
    |||||||||||||||||||||||||||||    
T  23760520 cctgaacatgtctaataatgattaggaaa 23760548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 37116704 - 37116664
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||||||||||||  ||||| ||||||||||||||||||||    
T  37116704 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 37116664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 170; Significance: 3e-91; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 16895 - 17135
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgga-ttctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  16895 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaacttttggaattctgacc-tgaactcgcca 16993  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||| |||||||||||||||||||||||||||||||||||||||||  ||| ||| | ||||| ||||||||||||||||||||||||||||| ||| |||    
T  16994 cggagagcagaggctctcgcctcgcgagtgacccagaaacagagtaccttattaggattttgcgacctttgttgcacgagttgttgagagttaaaccttg 17093  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgt 241  Q
    ||||||||||| |||||||| | |||||||||||||||||||    
T  17094 gggtagtattgagacttaatcatgatgttaattataatctgt 17135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 79044 - 79096
Alignment:
Q  3 tgaacatgtctaataatgattaggaaagaatttagaatgagattggacctgga 55  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||| |||||||    
T  79044 tgaacatgtttaataatgattaggaaggaatgtagaatgagattgaacctgga 79096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 168; Significance: 5e-90; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 13533 - 13292
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    |||||||||||||||| |||||||||||||||| ||| ||||||||| | ||| ||||||| ||||||||||||| ||| ||||||||| ||||||||||    
T  13533 cctgaacatgtctaattatgattaggaaagaatgtaggatgagattgaatctgaaaagattgtagaatgaaacttgtgggattctgacc-tgaactcgcc 13435  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||    
T  13434 acggcgagcagaggctctcgcctcgcgagtgacccagaaactgagtgtcttgttaggtttt-gcgacctttgttgcacgagttgttgagagttgaacttt 13336  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  13335 ggggtagtattgggacttaatgaagatgttaattataatctgtg 13292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 34561 - 34437
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||| ||| | || |||||||  ||||||||||    
T  34561 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttggagaatctgacc--gaactcgcca 34464  T
Q  100 cggcgagcagaggctctcgcctcgcga 126  Q
     ||||||||||||||||||||||||||    
T  34463 tggcgagcagaggctctcgcctcgcga 34437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 166; Significance: 8e-89; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 783 - 547
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| |||| |||||| |||||||||||||||||||| ||||| | ||||||||||     
T  783 cctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctagaaagaatttagaatgaaacttttggaatctgaac-tgaactcgccg 685  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||| ||||||||||||||||||| |||    
T  684 cggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttgcaacctttgttgcatgagttgttgagagttgaaccttg 585  T
Q  200 gggtagtattgggacttaatgaggatgttaattataat 237  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  584 gggtagtattgagacttaatgaggatgttaattataat 547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 3910 - 3673
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| |||| |||||| |||||| ||| ||||||||| |||||||||||    
T  3910 ctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgattgtagaatcaaacttgtgggattctgacc-tgaactcgcca 3812  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||  |||||| ||||| | |||||||||||||||||||||||||| ||||||||||    
T  3811 cggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgagttgttaggtttt-gcgacctttgttgcacgagttgttgagaattgaactttg 3713  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatct 239  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  3712 gggtagtattaagacttaatgaggatgttaattataatct 3673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 161; Significance: 8e-86; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 8212 - 8454
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgga-ttctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||||||||||||| ||||| || | ||||||||    
T  8212 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttttggaattctggcc-taaactcgcc 8310  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaac-tt 197  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||||| ||    
T  8311 acggtgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgtt-aggttttgcgaccttcgttgcacgagttgttgagagttgaacgtt 8409  T
Q  198 tggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
     ||||||||||||||||||||||||||||||||||||||||||||    
T  8410 gggggtagtattgggacttaatgaggatgttaattataatctgtg 8454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 160; Significance: 3e-85; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 52353 - 52113
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||| ||| ||||||||| ||||||||||    
T  52353 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacc-tgaactcgcc 52255  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||| |||| |||||||||||||||||||||||||||| ||    
T  52254 acggcgagcagaggctctcgcctcgcgagtgacccagaaactgagtgtcttgtt-aggttttgcgacc-ttgttgcacgagttgttgagagttgaacctt 52157  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||||  |||||||||| ||||||||||||||||||||    
T  52156 ggggtagtattaagacttaatgatgatgttaattataatctgtg 52113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 167670 - 167897
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||          ||| |||||||| ||| ||||||||| |||||||||||    
T  167670 cctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct----------agattgaaacttgtgggattctgacc-tgaactcgcca 167758  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| |||||||||||||||| |||| ||||||||||| ||     
T  167759 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttgcgacctttgttgcacgaattgtcgagagttgaaccttt 167857  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatct 239  Q
    |||||| |||  |||||||||| || ||||||||||||||    
T  167858 gggtagcattaagacttaatgaagaggttaattataatct 167897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 155; Significance: 3e-82; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 5 - 242
Target Start/End: Original strand, 18409511 - 18409748
Alignment:
Q  5 aacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgga-ttctgaccctgaactcgccacggc 103  Q
    |||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| || |||||||| |||||||||||||||    
T  18409511 aacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaactttttgaattctgacc-tgaactcgccacggc 18409609  T
Q  104 gagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggggt 203  Q
    ||||||||||||||||||| | |||||||||||||||||||| ||||||| | ||||  ||||||||||||||||||| ||||||||||||| || ||||    
T  18409610 gagcagaggctctcgcctctctagtgacccagaaacagagtgccttgttaggattttacgacctttgttgcacgagttattgagagttgaaccttagggt 18409709  T
Q  204 agtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||| |||||||||| ||||||||||||||| ||||    
T  18409710 agtattgagacttaatgatgatgttaattataatatgtg 18409748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 19303221 - 19303462
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggat-tctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||  ||||||| |||||||||||    
T  19303221 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatctgacc-tgaactcgcca 19303319  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| | ||||| || || ||| |||| ||||| | |||||||||| |||    
T  19303320 cggcgagcagaggctctcgcctcgagagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttg 19303419  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||| | || || ||||||| ||||||||||||||||||||    
T  19303420 gggtagcactgagaattaatgatgatgttaattataatctgtg 19303462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 29060981 - 29060740
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttggat-tctgaccctgaactcgcc 98  Q
    |||||||||||| ||||||||||||||| |||| ||| ||||||||| ||||||||||||| ||||||||| ||||||||  ||||||| ||||||||||    
T  29060981 cctgaacatgtccaataatgattaggaaggaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttggaaatctgacc-tgaactcgcc 29060884  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    ||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| | ||||| |||||||||||||||||||| | |||| ||||| ||    
T  29060883 acgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgctaagagctgaacctt 29060784  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||    
T  29060783 ggggtagtattgagacttaatgatgatattaattataatctgtg 29060740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 17287476 - 17287717
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||| ||||| ||||||||||||| ||||||||||||| ||| ||||||||| | ||||||||    
T  17287476 cctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgtacctggaaagattgtagaatgaaacttgtgggattctgacc-taaactcgcc 17287574  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    |||||||  ||||||||| | |||| ||||||||||||||||||||||||||||| | |||  | | |||||||||||||||||||||||||||||| ||    
T  17287575 acggcgattagaggctcttgtctcgtgagtgacccagaaacagagtgtcttgttagggtttgct-atctttgttgcacgagttgttgagagttgaacctt 17287673  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||| |||| ||||||||||||||||||||||||| |||||    
T  17287674 ggggtagcattgagacttaatgaggatgttaattataacctgtg 17287717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 22779907 - 22780148
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||| ||| ||||||||| | ||||||||    
T  22779907 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacc-taaactcgcc 22780005  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    ||||| |||| ||||||||||||||||||| ||| |||||||||||||| ||||| ||||| |||||||||||||||| |||||  ||||||||||| ||    
T  22780006 acggcaagcaaaggctctcgcctcgcgagtaacctagaaacagagtgtcctgttaggtttt-gtgacctttgttgcacaagttgccgagagttgaacctt 22780104  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||   |||||||||| ||||||||| ||||||||||    
T  22780105 ggggtagtataaagacttaatgatgatgttaatcataatctgtg 22780148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 5 - 242
Target Start/End: Original strand, 25629039 - 25629276
Alignment:
Q  5 aacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttg-gattctgaccctgaactcgccacgg 102  Q
    ||||| |||| |||||||||||||| | | ||||||||||||| ||||||||| |||| ||||| ||||||||| |||| ||||| || |||||||  ||    
T  25629039 aacatctctattaatgattaggaaatattgtagaatgagattgaacctggaaatattttagaat-aaacttttgtgattatgacc-tgtactcgccgtgg 25629136  T
Q  103 cgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgggg 202  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||| |||||||||||||||||| |||||||||| ||||||    
T  25629137 cgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacttttgttgcacgagttgttaagagttgaaccttgggg 25629236  T
Q  203 tagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||| |||||||||| | ||||||||||||||||||    
T  25629237 tagtattgagacttaatgatgttgttaattataatctgtg 25629276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 20637974 - 20638204
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||          |||||||| ||| ||||||||| |||||||||||    
T  20637974 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------tgaaacttgtgggattctgacc-tgaactcgcca 20638062  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||| |||||| || ||||| ||||||||||||||||||||| ||||||||||| |||    
T  20638063 cggcgagcaaaggctctcacctcgcgagtgacccagaaacagagtgccttgtt-agattttgcgacctttgttgcacgagttgtcgagagttgaaccttg 20638161  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    || ||  |||  |||||||||| ||||||||||||||||||||    
T  20638162 ggataacattaagacttaatgatgatgttaattataatctgtg 20638204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 20360651 - 20360881
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||          |||||||| ||| ||||||||| |||||||||||    
T  20360651 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------tgaaacttgtgggattctgacc-tgaactcgcca 20360739  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
     ||||||| ||||||||||||||||||||||||||||||||||||| |||||| || ||||| |||||||||||||||||||||||||  |||||| ||     
T  20360740 tggcgagctgaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-aggttttgcgacctttgttgcacgagttgttgaggattgaaccttt 20360838  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||  |||||||||| || |||||||||||| ||||    
T  20360839 gggtagtattaagacttaatgatgaggttaattataatatgtg 20360881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 20594210 - 20593973
Alignment:
Q  5 aacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttggat-tctgaccctgaactcgccacgg 102  Q
    |||||||||||  ||||||||| |||||| ||| ||||||||| ||||||||||||| |||||| |||||||||||  ||||||| ||||||||| ||||    
T  20594210 aacatgtctaaatatgattagggaagaatgtaggatgagattgaacctggaaagattgtagaat-aaacttttggaaatctgacc-tgaactcgctacgg 20594113  T
Q  103 cgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgggg 202  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||| | ||||| || || ||| |||| ||||||| || ||||||| ||||||    
T  20594112 cgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttgttaagggttgaaccttgggg 20594013  T
Q  203 tagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||| ||||||||||  ||| |||||||||||||||    
T  20594012 tagtattgagacttaatgataatgataattataatctgtg 20593973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 18821510 - 18821703
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||| ||||||||||||||| ||||| ||| ||||||||| ||||||||          |||||||| ||| ||||||||| |||||||||||    
T  18821510 cctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaa----------tgaaacttgtgggattctgacc-tgaactcgcca 18821598  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
     ||||||||||||||||||||||||||| ||||||||||||||||| |||||| || ||||| ||||||||||||||||||||| ||||||||||| |||    
T  18821599 tggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgtt-agattttgcgacctttgttgcacgagttgtcgagagttgaaccttg 18821697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 28496153 - 28496280
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||||    
T  28496153 cctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagacttagaatgaaacttttgagaatctga-cctgaactcgcca 28496251  T
Q  100 cggcgagcagaggctctcgcctcgcgagt 128  Q
     ||||||||||||||||||||||||||||    
T  28496252 tggcgagcagaggctctcgcctcgcgagt 28496280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 29808563 - 29808691
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga--tttagaatgaaacttttggattctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||  |||||||||||||||| ||| ||||| ||||||||||||    
T  29808563 cctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttgggaatctga-cctgaactcgcc 29808661  T
Q  99 acggcgagcagaggctctcgcctcgcgagt 128  Q
    | ||||||||||||||||||||||||||||    
T  29808662 atggcgagcagaggctctcgcctcgcgagt 29808691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 25611403 - 25611530
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaac--ttttggattctgaccctgaactcgcc 98  Q
    |||||||||||||||||||||||||||  ||||  || ||||||||||||||||||||| ||||||||||||   || ||||||||| ||||||||||||    
T  25611403 cctgaacatgtctaataatgattaggagtgaatgcagcatgagattggacctggaaagacttagaatgaaacaacttaggattctga-cctgaactcgcc 25611501  T
Q  99 acggcgagcagaggctctcgcctcgcgag 127  Q
    | || ||||||||||||||||||||||||    
T  25611502 atggagagcagaggctctcgcctcgcgag 25611530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 18457155 - 18456955
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||   ||| ||||||||  |||||||  |||| |||||||| ||||     
T  18457155 cctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaattaagaatgaactttttggaagctga-cctgaactagccat 18457057  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgtt-aagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||| |||||||||||||||||||||  ||||   |||||  | |||||| | | ||||| || |||||| |||||||| |||||||||||||| |||    
T  18457056 ggcgagtagaggctctcgcctcgcgagttgcccaattacaga-agccttgttcaggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttg 18456958  T
Q  200 ggg 202  Q
    |||    
T  18456957 ggg 18456955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 1561744 - 1561622
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatg-aaacttttg-gattctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| | |||||||| ||||||||| || |||||||  ||||| |||    
T  1561744 cctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaaaaacttagaatgaaaacttttgagaatctgacc--gaacttgcc 1561647  T
Q  99 acggcgagcagaggctctcgcctcg 123  Q
    |||||||||| ||||||||||||||    
T  1561646 acggcgagcataggctctcgcctcg 1561622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 16920324 - 16920507
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgga-ttctgaccctgaactcgcca 99  Q
    |||||| |||||||||||||||||| ||||||| ||| || |||||| ||||||||          | |||||| |||| |||||||| |||||||||||    
T  16920324 cctgaatatgtctaataatgattagaaaagaatgtaggataagattgtacctggaa----------ttaaacttatggaattctgacc-tgaactcgcca 16920412  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaac 195  Q
     ||||||||||||||||||||| |||||||||||||||||| |||| ||||||  | ||||| |||||||||||||||| || | |||||||||||    
T  16920413 tggcgagcagaggctctcgccttgcgagtgacccagaaacaaagtgacttgtt-ggattttgcgacctttgttgcacgatttctcgagagttgaac 16920507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 21939824 - 21939699
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||| ||||| ||||||||||||||| ||| |||||||||  |||||||||| ||||||| ||||||| | || |||||  ||||||||||||    
T  21939824 cctgaacatgtgtaatattgattaggaaagaatgtaggatgagattgagcctggaaagacttagaataaaactttggagaatctga--ctgaactcgcca 21939727  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  21939726 tggcgagcagaggctctcgcctcgcgag 21939699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 195
Target Start/End: Complemental strand, 22831856 - 22831749
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttga 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||  | ||||| ||||||||| |||||| | || ||    
T  22831856 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgaccgagaaacagagtgacttgtt-ggattttgcgacctttgtcgcacgattcgtcga 22831758  T
Q  187 gagttgaac 195  Q
    |||||||||    
T  22831757 gagttgaac 22831749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 4667893 - 4668019
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    |||||||| ||||||||| |||||||||||||| |||| |||||||||||||||||||| |||||||||||  |||  ||  |||| |||||||||||||    
T  4667893 cctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatgaatttttgtgaa-ctgaacctgaactcgcca 4667991  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||| ||||||||||||||||||||    
T  4667992 tggcgagtagaggctctcgcctcgcgag 4668019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 15894110 - 15894237
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaact--tttggattctgaccctgaactcgcc 98  Q
    ||||||||||||||||| |||||||||  |||| ||  ||||||||||||||||||||| |||||||||||    || ||||||||||| ||||||||||    
T  15894110 cctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctggaaagacttagaatgaaagaacttgggattctgacc-tgaactcgcc 15894208  T
Q  99 acggcgagcagaggctctcgcctcgcgag 127  Q
    | ||||||||||| ||||| |||||||||    
T  15894209 atggcgagcagagtctctcacctcgcgag 15894237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 19652636 - 19652512
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||||||||||| |||||||||||  |||  || | ||  |||||||||||||    
T  19652636 cctgaacatgtctaataatgattaggaaagattgaagaatgagattgaacctggaaagactttagaatgaatttttgtgaat-tgtacctgaactcgcca 19652538  T
Q  100 cggcgagcagaggctctcgcctcgcg 125  Q
     |||||| ||||||||||||||||||    
T  19652537 tggcgagtagaggctctcgcctcgcg 19652512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 25603065 - 25603188
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaac--ttttggattctgaccctgaactcgcc 98  Q
    |||||||||||||||||||||||||||  ||||  |  ||||||||||||||||||||| ||||||||||||   || ||||||||| | ||||||| ||    
T  25603065 cctgaacatgtctaataatgattaggagtgaatgcatgatgagattggacctggaaagacttagaatgaaacaacttaggattctga-cttgaactcacc 25603163  T
Q  99 acggcgagcagaggctctcgcctcg 123  Q
    | |||||||||||||||||||||||    
T  25603164 atggcgagcagaggctctcgcctcg 25603188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 11185856 - 11185769
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgca 175  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| |||||| || ||||| |||||||||||||    
T  11185856 cctgaactcgccacggcgagcagaggccctcgcctcgtgagtgacccagaaacatagtgacttgtt-agattttgcgacctttgttgca 11185769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 4189397 - 4189271
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    |||||||| ||||||||| |||||||||||||| |||| |||||||||||||||||||| |||||||||||  |||  ||  |||| ||| |||||| ||    
T  4189397 cctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatgaatttttgtgaa-ctgaacctaaactcgtca 4189299  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||| ||||||||||||||||||||    
T  4189298 tggcgagtagaggctctcgcctcgcgag 4189271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 4674740 - 4674866
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    |||||||| ||||||||| |||||||||||||| |||| |||||||||||||||||||| |||||||||||  |||  ||  |||| ||| |||||| ||    
T  4674740 cctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatgaatttttgtgaa-ctgaaccttaactcgtca 4674838  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||| ||||||||||||||||||||    
T  4674839 tggcgagtagaggctctcgcctcgcgag 4674866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 4185505 - 4185629
Alignment:
Q  3 tgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgccacg 101  Q
    |||||| ||||||||| ||||| |||||||| |||| |||||||| ||||||||||| |||||||||||  |||  ||  |||| ||||||||||||| |    
T  4185505 tgaacaagtctaataacgattatgaaagaatgtagagtgagattgaacctggaaagagtttagaatgaatttttgtgaa-ctgaacctgaactcgccatg 4185603  T
Q  102 gcgagcagaggctctcgcctcgcgag 127  Q
    ||||| ||||||||||||||||||||    
T  4185604 gcgagtagaggctctcgcctcgcgag 4185629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 27332965 - 27333089
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    |||||||||| |||| |||||||||||||| ||||||||||| ||| ||||||||||| |||||||||||  |||  || | ||  |||||||||||||     
T  27332965 ctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattttagaatgaagttttgtgagt-tgcacctgaactcgccat 27333063  T
Q  101 ggcgagcagaggctctcgcctcgcga 126  Q
    |||||| |||||||||||||||||||    
T  27333064 ggcgagtagaggctctcgcctcgcga 27333089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 27393705 - 27393829
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    |||||||||| |||| |||||||||||||| ||||||||||| ||| ||||||||||| |||||||||||  |||  || | ||  |||||||||||||     
T  27393705 ctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattttagaatgaagttttgtgagt-tgcacctgaactcgccat 27393803  T
Q  101 ggcgagcagaggctctcgcctcgcga 126  Q
    |||||| |||||||||||||||||||    
T  27393804 ggcgagtagaggctctcgcctcgcga 27393829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22334562 - 22334632
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaa 71  Q
    ||||||||||||||||| |||||||||  |||| ||  ||||||||||||||||||| | |||||||||||    
T  22334562 cctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctggaaatacttagaatgaaa 22334632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 23019848 - 23019721
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||| | ||||||||||||||||| |||||| |||||||| |||||||| |  || ||||||||  ||| ||| | |   |||||||||||||    
T  23019848 cctgaacatgtgtgataatgattaggaaagattttagattgagattgaacctggaatattttaagaatgaatttttgggagt-tacacctgaactcgcca 23019750  T
Q  100 cggcgagcagaggctctcgcctcgcgagt 128  Q
     |||||| |||||| || |||||||||||    
T  23019749 tggcgagtagaggcccttgcctcgcgagt 23019721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31155078 - 31155137
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagat 60  Q
    |||||| | ||||||||| |||| ||||||||| ||||||||||||| ||||||||||||    
T  31155078 cctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctggaaagat 31155137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 25641953 - 25641991
Alignment:
Q  89 tgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  25641953 tgaactcgccacggcgagcagatgctctcgcctcgcgag 25641991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 25644674 - 25644558
Alignment:
Q  90 gaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaag-tttttgtgacctttgttgcacgagttgttgaga 188  Q
    ||||||||||  ||||| |||||| ||||||||||||||  ||| |   |||| || |||||| || |||||| || |||||| |||||||||| |||||    
T  25644674 gaactcgccatagcgagtagaggccctcgcctcgcgagttgcccggtttcagaatg-cttgtttaggtttttgcgatctttgtcgcacgagttgctgaga 25644576  T
Q  189 gttgaactttggggtagt 206  Q
    ||||||| ||||||||||    
T  25644575 gttgaaccttggggtagt 25644558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 22080503 - 22080543
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  22080503 cctgaactcgccatggcgagtagaggctctcgcctcgcgag 22080543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 8244193 - 8244158
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  8244193 actcgccacggcgagcagatgctctcgcctcgcgag 8244158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 11567195 - 11567160
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  11567195 actcgccacggcgagcagatgctctcgcctcgcgag 11567160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 19870923 - 19870888
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  19870923 actcgccacggcgagcagatgctctcgcctcgcgag 19870888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 22863278 - 22863243
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22863278 actcgccacggcgagcagatgctctcgcctcgcgag 22863243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 23395401 - 23395366
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  23395401 actcgccacggcgagcagatgctctcgcctcgcgag 23395366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 5834367 - 5834413
Alignment:
Q  191 tgaactttggggtagtattgggacttaatgaggatgttaattataat 237  Q
    ||||| ||||||||||||||||||||||||  |||| ||||||||||    
T  5834367 tgaaccttggggtagtattgggacttaatggtgatgctaattataat 5834413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 20177165 - 20177119
Alignment:
Q  191 tgaactttggggtagtattgggacttaatgaggatgttaattataat 237  Q
    ||||| ||||||||||||||||||||||||  |||| ||||||||||    
T  20177165 tgaaccttggggtagtattgggacttaatggtgatgctaattataat 20177119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 22158826 - 22158872
Alignment:
Q  191 tgaactttggggtagtattgggacttaatgaggatgttaattataat 237  Q
    ||||| ||||||||||||||||||||||||  |||| ||||||||||    
T  22158826 tgaaccttggggtagtattgggacttaatggtgatgctaattataat 22158872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 16924647 - 16924687
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||| |||||||| |||||||||| ||||||||||||||||    
T  16924647 cctgtactcgccatggcgagcagatgctctcgcctcgcgag 16924687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 16929362 - 16929402
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||| |||||||| |||||||||| ||||||||||||||||    
T  16929362 cctgtactcgccatggcgagcagatgctctcgcctcgcgag 16929402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 19668728 - 19668688
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||||||||||||  ||||| ||||||||||||||||||||    
T  19668728 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 19668688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 23657189 - 23657229
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||| |||||||| |||||||||| ||||||||||||||||    
T  23657189 cctgtactcgccatggcgagcagatgctctcgcctcgcgag 23657229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 31155164 - 31155204
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||| |||| ||| |||||||||||||||||||||||||||    
T  31155164 cctgtactctccatggcgagcagaggctctcgcctcgcgag 31155204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 151; Significance: 7e-80; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 23323 - 23082
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||| ||||||  || ||| | ||||||| | ||| |||||||    
T  23323 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattggatctggaaagattgtagaattgaattttggaattctgaac-tgagctcgcca 23225  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    | |||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||    
T  23224 cagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttg 23125  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||| |||||||||| ||||||| ||||||||||||    
T  23124 gggtagtattgagacttaatgatgatgttatttataatctgtg 23082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 148; Significance: 4e-78; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 25745 - 25983
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||| ||||||| |||||||||  ||| | | ||||||| |||||||||||    
T  25745 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgaaaagattgtagaatgaatttttggaaatctgacc-tgaactcgcca 25843  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| |||||||||||||||||||| | |||| ||||| |||    
T  25844 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgctaagagctgaaccttg 25943  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatct 239  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  25944 gggtagtattgagacttaatgatgatgttaattataatct 25983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 33174 - 33410
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttggat-tctgaccctgaactcgcc 98  Q
    |||| |||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||||||||||||  ||| ||| ||||||||||    
T  33174 cctggacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattttagaatgaaacttttggaagtcttacc-tgaactcgcc 33272  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||| ||||| | | ||||| || || |||   || ||||||| |||||||||| ||    
T  33273 acggcgagcaaaggctctcgcctcgcgtgtgacccagaaacagagtgccttgtcaggattttgcgatctgtgtcatacaagttgttaagagttgaacctt 33372  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataa 236  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  33373 ggggtagtattgagacttaatgatgatgttaattataa 33410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 2e-77; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 22636874 - 22636634
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||| ||||||||||||| ||| ||||||||  ||| |||||||    
T  22636874 ctgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaaattgtagaatgaaacttgtgggattctgact-tgacctcgcca 22636776  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||| |||||| |||    
T  22636775 cggcgagcagaggctctcgcctcacgagtgacccagaaacagagtgtcttgttaggtttt-gcgacctttgttgcacgagttgttgagaattgaaccttg 22636677  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||  ||||||| |||||||||||||||||||||||    
T  22636676 gggtagtattaagacttaacgaggatgttaattataatctgtg 22636634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 15091337 - 15091096
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttggat-tctgaccctgaactcgcca 99  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||||  ||||||| |||||||||||    
T  15091337 ctgaacatgtctaatattgattaggaaagaatgtagaatgagattgaacctggaaggattttagaatgaaacttttggaaatctgacc-tgaactcgcca 15091239  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| || || ||| |||| ||||  | |||||||||| |||    
T  15091238 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagtttctaagagttgaaccttg 15091139  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  15091138 gggtagtattgagacttaatgaagatgttaattataatctgtg 15091096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 14039090 - 14038848
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttggat-tctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||| |||| ||||||||| |||||||||||||||||  |||||||  |||||||||    
T  14039090 cctgaacatgtctaataatgatttggaaagaatgtagaatgagattgaacctagaaagattttagaatgaaacttttggaaatctgacca-gaactcgcc 14038992  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| || || ||| |||| ||||| | |||||||||| ||    
T  14038991 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttgctaagagttgaacctt 14038892  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||    
T  14038891 ggggtagtattgagacttaatgatgatattaattataatctgtg 14038848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 44053269 - 44053029
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    |||||||||||||||||||||| ||||||||| ||| ||||||||| ||||| ||||||| ||| ||||||||| ||| ||||||||| |||||||||||    
T  44053269 ctgaacatgtctaataatgattgggaaagaatgtaggatgagattgaacctgtaaagattataggatgaaacttgtgggattctgacc-tgaactcgcca 44053171  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||| || ||||| ||||||||||||||||||||| ||||||||||| |||    
T  44053170 cggcgagcagagactctcgcctcgcgagtgacccagaaacagagtgccttgtt-agattttgcgacctttgttgcacgagttgtcgagagttgaaccttg 44053072  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    || ||| |||  |||||||||| ||||||||||||||||||||    
T  44053071 ggatagcattaagacttaatgatgatgttaattataatctgtg 44053029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 16377203 - 16377450
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||| |||||||| |||  |||||||||  ||| ||| ||||||| ||||||||||||    
T  16377203 ctgaacatgtctaataatgattaggaaataatgtaggatgagattgaacctggaatgatcgtagaatgaacttttgggaatctgacc-tgaactcgccac 16377301  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgt-tgagagttgaactttg 199  Q
    |||||||||||||||||||||| ||||||||||||||||| |||| ||||||| | |||||  |||||||||||||||||| | |||||||||||| |||    
T  16377302 ggcgagcagaggctctcgcctcacgagtgacccagaaacatagtgccttgttaggattttgctacctttgttgcacgagttttatgagagttgaaccttg 16377401  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtggtgctg 248  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  16377402 gggtagtattgagacttaatgatgatgttaattataatctgtggagctg 16377450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 12903187 - 12902957
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||          |||||||| ||| ||||||||| |||||||||||    
T  12903187 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------tgaaacttgtgggattctgacc-tgaactcgcca 12903099  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||| |||||| || ||||| ||||||||||||||||| ||||||||||||||| ||     
T  12903098 cggcgagtagaggctcccgcctcgcgagtgacccagaaacagagtgccttgtt-agattttgcgacctttgttgcacgagctgttgagagttgaaccttt 12903000  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||| |||  |||||||||| || |||||||||||||||||    
T  12902999 gggtaggattaagacttaatgaagaggttaattataatctgtg 12902957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 16239672 - 16239889
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatt-tagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| |||||||| | |||||||||||      
T  16239672 cctgaacatgtctaataatgattaggaaagaaatgtagaatgagattgaacctggaaagatttagaatgaaacttgtggattct-aacctgaactcgc-- 16239768  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
                        |||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  16239769 --------------------ctcgcgagtgacccagaaacagagtgacttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaactttg 16239848  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctg 240  Q
    ||||||||||  |||||||||| ||||||||||||||||||    
T  16239849 gggtagtattaagacttaatgatgatgttaattataatctg 16239889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 7089307 - 7089077
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||          |||||||| ||| ||||||||| |||||||||||    
T  7089307 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------tgaaacttatgggattctgacc-tgaactcgcca 7089219  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
     ||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||| ||||||||||||| ||||||| ||||||||||| ||     
T  7089218 tggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgtcttgtt-agattttgcgacctttgttgcaagagttgtcgagagttgaaccttt 7089120  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    | |||| |||  |||||||||| || |||||||||||||||||    
T  7089119 gagtagcattaagacttaatgaagaggttaattataatctgtg 7089077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 3097073 - 3096843
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||          |||||||| ||| ||||||||| |||||||||||    
T  3097073 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------tgaaacttgtgggattctgacc-tgaactcgcca 3096985  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
     ||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||||||||||||||||||| ||||||||||| ||     
T  3096984 aggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttgcgacctttgttgcacgagttgtcgagagttgaaccttt 3096886  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||| ||    ||||||||| || |||||||||||| ||||    
T  3096885 gggtaggataaatacttaatgatgaggttaattataatatgtg 3096843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 7894077 - 7893900
Alignment:
Q  65 aatgaaacttttgg-attctgaccctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtg 163  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| |    
T  7894077 aatgaaacttgtgggattctgacc-tgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagagtcttgttaggtttttgcg 7893979  T
Q  164 acctttgttgcacgagttgttgagagttgaactttggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||||| ||||||  ||||||||||| |||||||| ||||  ||||||| || ||||||||||||||||||||    
T  7893978 acctttgttgcatgagttgccgagagttgaaccttggggtaatattaagacttaacgatgatgttaattataatctgtg 7893900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 7799138 - 7798953
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    |||||||||| |||||||||||||||| | ||| ||| ||||||||| |||||||||| || ||||||||||||| | | ||||||||| ||||||||||    
T  7799138 cctgaacatgactaataatgattaggacataatgtaggatgagattgaacctggaaagtttgtagaatgaaacttgtagtattctgacc-tgaactcgcc 7799040  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttga 186  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||| |||||||||| |||||||||||||    
T  7799039 acggcgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgtcttgtt-aggttttgcgacctttgtttcacgagttgttga 7798953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 44928603 - 44928808
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||| ||| ||||| || ||||||||||    
T  44928603 cctgaacatatctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaatctga-ccagaactcgcca 44928701  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg-ttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
     |||||||||||||||||||||||||||||||||||  ||||| || |||| ||| | ||||| || |||||| |||||||| |||||||||||||| ||    
T  44928702 tggcgagcagaggctctcgcctcgcgagtgacccagttacagaatg-cttgtttaggattttgcgatctttgtcgcacgagtcgttgagagttgaacctt 44928800  T
Q  199 ggggtagt 206  Q
    | ||||||    
T  44928801 gtggtagt 44928808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 14052993 - 14053223
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    |||||| |||||||||||||||||||||||||| ||| ||||||||| || |||||          | |||||| ||| ||||||||| ||||||| |||    
T  14052993 cctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacttggaa----------ttaaacttgtgggattctgacc-tgaactcacca 14053081  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
     ||||||||||||||||||||| ||||||||||||||||||||||| |||||| || ||||| ||||||||||||||||||||| |||||||||||  |     
T  14053082 tggcgagcagaggctctcgccttgcgagtgacccagaaacagagtgacttgtt-agattttgcgacctttgttgcacgagttgtcgagagttgaaccctt 14053180  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||| |||  |||||||  | || |||||||||||||||||    
T  14053181 gggtaggattaagacttaacaatgaggttaattataatctgtg 14053223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 17047764 - 17047972
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    |||||||||| |||||||||||||||||| ||| ||| ||||||||| ||           | ||||||||||| ||| ||||||||| |||||||||||    
T  17047764 cctgaacatgactaataatgattaggaaaaaatgtaggatgagattgaac-----------tggaatgaaacttgtgggattctgacc-tgaactcgcca 17047851  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
     ||||||||||||||||||||||||||||||||| ||||||||||| |||| | ||  |||| ||||||||||||||||||||||||||||||||| ||     
T  17047852 tggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgccttg-tgagactttgcgacctttgttgcacgagttgttgagagttgaaccttt 17047950  T
Q  200 gggtagtattgggacttaatga 221  Q
    ||||||||||  ||||||||||    
T  17047951 gggtagtattaagacttaatga 17047972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 87 - 239
Target Start/End: Original strand, 23374126 - 23374277
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttga 186  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| || |||||  |||||||||||||||||||||||    
T  23374126 cctgaactcgccacggcgagcagaggctctcgcctcgcgggtgacccagaaacagagtgacttgtt-agattttgcaacctttgttgcacgagttgttga 23374224  T
Q  187 gagttgaactttggggtagtattgggacttaatgaggatgttaattataatct 239  Q
    |  || ||| || |||||| |||  |||||||||| || ||||| ||||||||    
T  23374225 ggattaaacctttgggtagcattaagacttaatgaagaggttaactataatct 23374277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 15552254 - 15552129
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||| ||| ||| | || |||||||  ||||||||||    
T  15552254 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagacttagaatcaaaatttggagaatctgacc--gaactcgcca 15552157  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
    |||||||||||||||| |||||||||||    
T  15552156 cggcgagcagaggctcgcgcctcgcgag 15552129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 24029182 - 24029057
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||| |||||| |||||||| ||| ||||||||| ||||||||||| ||||||||||||||| | || |||||  ||||||||||||    
T  24029182 cctgaacatgtctaatattgattatgaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctga--ctgaactcgcca 24029085  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  24029084 tggcgagcagaggctctcgcctcgcgag 24029057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22633893 - 22634018
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||||| |||||||  | |   |||||||||||     
T  22633893 cctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaac-tttggataatcagattgaactcgccat 22633991  T
Q  101 ggcgagcagaggctctcgcctcgcgag 127  Q
    |||||||||||||||||||||||||||    
T  22633992 ggcgagcagaggctctcgcctcgcgag 22634018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 13812490 - 13812614
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgccac 100  Q
    |||||||||||||||| ||||||||||| ||| ||| ||||||||| ||||||||||| ||||||||||||||| | || |||||  || |||||||||     
T  13812490 ctgaacatgtctaatattgattaggaaataatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctga--ctaaactcgccat 13812587  T
Q  101 ggcgagcagaggctctcgcctcgcgag 127  Q
    |||||||||||||||||||||||||||    
T  13812588 ggcgagcagaggctctcgcctcgcgag 13812614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 16597086 - 16596963
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||| ||| | || |||||||  ||||||||||    
T  16597086 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagacttagaatgaaaatttagagaatctgacc--gaactcgcca 16596989  T
Q  100 cggcgagcagaggctctcgcctcgcg 125  Q
     |||||| ||||| ||||||| ||||    
T  16596988 tggcgagtagaggttctcgccccgcg 16596963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 44102650 - 44102446
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||| ||||| |||||||||||| ||| |||| ||| ||||||||| ||||||| |||||| ||||| |||||||  || ||||||| |||||||||||    
T  44102650 cctgagcatgtttaataatgattatgaa-gaatgtaggatgagattgaacctggatagattttagaataaaactttgagaatctgacc-tgaactcgcca 44102553  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg-ttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
     |||||||||||||||||||||||||||||||| |   ||||| |  |||| ||| | ||||| || |||||| |||||||| |||||||||||||| ||    
T  44102552 tggcgagcagaggctctcgcctcgcgagtgacctatttacagaat-acttgtttaggattttgcgatctttgtagcacgagtcgttgagagttgaacctt 44102454  T
Q  199 ggggtagt 206  Q
    ||| ||||    
T  44102453 gggatagt 44102446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 20156970 - 20157095
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttt-tggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||  |||||||||||||||   || | |||  ||||||||||||    
T  20156970 cctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaggcttagaatgaaactttgaagaatatga--ctgaactcgcca 20157067  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||| ||||||||||||||||||||||    
T  20157068 tggcgtgcagaggctctcgcctcgcgag 20157095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 21814984 - 21815109
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgccacg 101  Q
    |||||||||| |||||||||||||||||||||||||||||| | || |||||||   ||| ||||||||  |||||||  |||| | ||||||||||| |    
T  21814984 ctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctggattaattaagaatgaactttttggaagctga-cttgaactcgccatg 21815082  T
Q  102 gcgagcagaggctctcgcctcgcgagt 128  Q
    ||||| |||||||||||||||||||||    
T  21815083 gcgagtagaggctctcgcctcgcgagt 21815109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 21815313 - 21815438
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgccacg 101  Q
    |||||||||| ||||||||||||||||| |||||||||||| | || |||||||   ||| ||||||||  |||||||  |||| ||||||||||||| |    
T  21815313 ctgaacatgtttaataatgattaggaaataatttagaatgataatgaacctggattaattaagaatgaactttttggaagctga-cctgaactcgccatg 21815411  T
Q  102 gcgagcagaggctctcgcctcgcgagt 128  Q
    ||||| |||||||||||||||||||||    
T  21815412 gcgagtagaggctctcgcctcgcgagt 21815438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 21818406 - 21818531
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgccacg 101  Q
    |||||||||| |||||||||||||||||||||||||||||| | || |||||||   ||| ||||||||  |||||||  |||| | ||||||||||| |    
T  21818406 ctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctggattaattaagaatgaactttttggaagctga-cttgaactcgccatg 21818504  T
Q  102 gcgagcagaggctctcgcctcgcgagt 128  Q
    ||||| |||||||||||||||||||||    
T  21818505 gcgagtagaggctctcgcctcgcgagt 21818531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 12774439 - 12774313
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagat-ttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||| ||||| |  |||||||||||| ||||||| |||  ||||||||||  || || |  |||| |||||||||||||    
T  12774439 cctgaacatgtctaataatgattagaaaagattggagaatgagattgaacctggagagacgttagaatgaattttgtgaa--ctgaacctgaactcgcca 12774342  T
Q  100 cggcgagcagaggctctcgcctcgcgagt 128  Q
     ||||||||||||||||||||||||||||    
T  12774341 tggcgagcagaggctctcgcctcgcgagt 12774313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 8846816 - 8846689
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttg-gattctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||||||||||| |||||||||||  ||||| || | ||  ||| ||||||||    
T  8846816 cctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaattttttgtgagt-tgcaccttaactcgcc 8846718  T
Q  99 acggcgagcagaggctctcgcctcgcgag 127  Q
    | |||||| ||||||||||||||||||||    
T  8846717 atggcgagtagaggctctcgcctcgcgag 8846689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 3332287 - 3332201
Alignment:
Q  40 tgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||||||| ||||||||||| ||||||||||||||| | || ||||||  ||||||||||| |||||||||||||||||||||||||||    
T  3332287 tgagattgaacctggaaagacttagaatgaaactttggagaatctgac--tgaactcgccatggcgagcagaggctctcgcctcgcgag 3332201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 52242873 - 52243079
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| || || |||||| |   || ||| |   ||| |||||||||||    
T  52242873 cctgaacatgtataataatgatcaggaaagattctagaatgagattgaacctggaatagtttaagaatgcattgttgggagttacacc-tgaactcgcca 52242971  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg-ttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
      ||||| |||||||||||||||||||||  |||||  ||||| || |||| ||| | ||||| || |||||| |||||||| ||  |||||||||||||    
T  52242972 tagcgagtagaggctctcgcctcgcgagttgcccagttacagaatg-cttgtttaggattttgcgatctttgtcgcacgagtcgtaaagagttgaacttt 52243070  T
Q  199 ggggtagta 207  Q
    |||||||||    
T  52243071 ggggtagta 52243079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6190874 - 6190800
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaactt 74  Q
    ||||||||||| ||||||||||||||| ||||| ||| ||||||||| ||||||||||||| |||||||||||||    
T  6190874 cctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaaagattgtagaatgaaactt 6190800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 6190782 - 6190699
Alignment:
Q  121 tcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggggtag 205  Q
    |||||||||||||| ||| |||||| ||||||| | ||||| ||||||||||||||||| ||| ||||||||||| |||| ||||    
T  6190782 tcgcgagtgacccaaaaatagagtgacttgtta-gattttgcgacctttgttgcacgagctgtcgagagttgaaccttggcgtag 6190699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 15099791 - 15099640
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||| ||| | || |||||||||||||| | |||| |||||||| |||||||| || || ||||||||  |||  || | ||  |||||||||||||    
T  15099791 cctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctggaatagtttaagaatgaatttttgtgagt-tgcacctgaactcgcca 15099693  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgtt 152  Q
     |||||| ||||||||||||||||||||  | ||||  ||||| |||||||||    
T  15099692 tggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgtcttgtt 15099640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 15464609 - 15464816
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    |||||| |||| ||||||||||||||||||| |||||| |||||||| ||||| || || || ||||||  | |||||| |  |   ||||||||| |||    
T  15464609 cctgaatatgtataataatgattaggaaagattttagattgagattgaacctgaaatagtttaagaatg-gatttttgggtgttacacctgaactcacca 15464707  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg-ttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
      ||||| |||||||||||||||||||||  |||||  ||||| || |||| ||| | |||||  | |||||| |||| |||||||  ||||||||| ||    
T  15464708 tagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgacttgtttaggattttgcaatctttgtcgcacaagttgttatgagttgaacctt 15464807  T
Q  199 ggggtagta 207  Q
    || ||||||    
T  15464808 ggagtagta 15464816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43198268 - 43198323
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa 56  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||||| || |||||    
T  43198268 cctgaacatgtgtaataatgattaggaaagattttagattgagattgaacatggaa 43198323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17046757 - 17046725
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaat 33  Q
    |||||||||||||||||||||||||||||||||    
T  17046757 cctgaacatgtctaataatgattaggaaagaat 17046725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 4561107 - 4561142
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4561107 actcgccacggcgagcagatgctctcgcctcgcgag 4561142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 5756711 - 5756746
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  5756711 actcgccacggcgagcagatgctctcgcctcgcgag 5756746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 33742710 - 33742675
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  33742710 actcgccacggcgagcagatgctctcgcctcgcgag 33742675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39705968 - 39706023
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa 56  Q
    ||||||||||||||||||||||||||||||| |  ||| | |||||| ||||||||    
T  39705968 cctgaacatgtctaataatgattaggaaagattgaagattaagattgaacctggaa 39706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15868315 - 15868368
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctgg 54  Q
    |||||| |||| ||||||||||||||||||  |||||| |||||||| ||||||    
T  15868315 cctgaatatgtataataatgattaggaaagtttttagattgagattgaacctgg 15868368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 12287814 - 12287866
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctgg 54  Q
    |||||||||| |||||||||||||| |||  |||||| |||||||| ||||||    
T  12287814 ctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 12287866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 146; Significance: 7e-77; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 125023 - 124785
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| |||||   | ||||||||||||| ||||||||||||| ||| ||||||||| ||||||||||    
T  125023 cctgaacatgtctaataatgattaggaaagaatgtaggatgag---gaacctggaaagattgtagaatgaaacttgtgggattctgacc-tgaactcgcc 124928  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||||||| ||||||||||| ||    
T  124927 acggcgagcagaggctctcgcctcgcgagtgacccagaaaaagagtgtcttgtt-agattttgcgacctttgttgcacgagttgtcgagagttgaacctt 124829  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||| ||| |||  |||||||||||||||||||||||||||||||    
T  124828 gggatagcattaagacttaatgaggatgttaattataatctgtg 124785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 63000 - 62932
Alignment:
Q  3 tgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaa 70  Q
    ||||||||||||||||||||||||||||| |  |||||||||||| ||||||||| | |||||||||||    
T  63000 tgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaatattttagaatgaa 62932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 136132 - 136173
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgagt 128  Q
    |||||||||||||  ||||| |||||||||||||||||||||    
T  136132 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 136173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 144840 - 144881
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgagt 128  Q
    |||||||||||||  ||||| |||||||||||||||||||||    
T  144840 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 144881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 144; Significance: 1e-75; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 2292 - 2051
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||| ||| ||||||||| ||||||||||    
T  2292 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacc-tgaactcgcc 2194  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    | |||||| ||||||| ||||||| ||||||||||  |||||||||| ||||||| | ||||||||||||||||||||||||||| ||||||||||| ||    
T  2193 atggcgagtagaggctatcgcctcacgagtgaccctaaaacagagtgccttgtta-gattttgtgacctttgttgcacgagttgtcgagagttgaacctt 2095  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||| |||||||  |||||||||||||||||||||||||||||||    
T  2094 gggatagtattaagacttaatgaggatgttaattataatctgtg 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 207199 - 207324
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||| ||||||||| ||||| ||| ||||||||| ||||||||||| ||||||||||||||| | || |||||  ||||||||||||    
T  207199 cctgaacatgtctaatattgattaggagagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctga--ctgaactcgcca 207296  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  207297 tggcgagcagaggctctcgcctcgcgag 207324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 23982 - 24222
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||| ||| ||| ||||||||| |||||||||  | ||||||||||||| ||| ||||||||| |||||||||||    
T  23982 cctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaaattgtagaatgaaacttgtgggattctgacc-tgaactcgcca 24080  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    | ||||||||||||||||||||||||||||||| ||||||| |||| ||||||| | ||||| ||||||||||||||||||||| |||||||||||||||    
T  24081 cagcgagcagaggctctcgcctcgcgagtgacctagaaacaaagtgccttgtta-gattttgcgacctttgttgcacgagttgtcgagagttgaactttg 24179  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    || |||||||  |||||| ||||||||||||||||||||||||    
T  24180 ggatagtattaagacttattgaggatgttaattataatctgtg 24222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 20844 - 20603
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||| ||| ||||||||| ||||||||||    
T  20844 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattatagaatgaaacttgtgggattctgacc-tgaactcgcc 20746  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| |||||| || ||||| ||||||||||||||||||||| ||||||||||| ||    
T  20745 acggcgagcagaggctctcgcctcgcgagcgacctagaaacagagtgccttgtt-agattttgcgacctttgttgcacgagttgtcgagagttgaacctt 20647  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||  ||| |||  |||||||||| |||||||| |||||||||||    
T  20646 ggaatagcattaagacttaatgatgatgttaactataatctgtg 20603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 139; Significance: 1e-72; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 40297 - 40057
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    |||||||||||||||||||||||||||||||||  || ||||||||| ||||||||||||| ||||||||||||||||| |||| ||| || ||||||||    
T  40297 cctgaacatgtctaataatgattaggaaagaatggaggatgagattgaacctggaaagattgtagaatgaaacttttggtttctaacc-tgtactcgcca 40199  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||||||||||||||||||| |||||| |||||| ||||| ||||||| | ||||| |||||||||||||| | |||||||||||||||| ||     
T  40198 cggcgagcagaggctctcgcctcgcgggtgacctagaaaccgagtgccttgttatgattttgcgacctttgttgcacaatttgttgagagttgaacctt- 40100  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||| |||| |||||||||||||||||||||||||| ||||    
T  40099 gggtagcattgagacttaatgaggatgttaattataatttgtg 40057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 124 - 242
Target Start/End: Complemental strand, 26213 - 26095
Alignment:
Q  124 cgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggggtagtattgggacttaatgagg 223  Q
    ||||||||||||||||  |||| ||||||| | ||||| |||||||||||||||| |||||||||||||||| ||||||||| |||| ||||||||||||    
T  26213 cgagtgacccagaaaccaagtgccttgttaggattttgcgacctttgttgcacgatttgttgagagttgaaccttggggtagcattgagacttaatgagg 26114  T
Q  224 atgttaattataatctgtg 242  Q
    |||||||||||||||||||    
T  26113 atgttaattataatctgtg 26095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 26662 - 26555
Alignment:
Q  5 aacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttggattctgaccctgaactcgccacggc 103  Q
    ||||||||||||||||||||||||||||| ||| ||||||||  ||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||    
T  26662 aacatgtctaataatgattaggaaagaatgtaggatgagattaaacctggaaagattgtagaatgaaacttttggattctga-cctgaagtcgccacggc 26564  T
Q  104 gagcagagg 112  Q
    |||||||||    
T  26563 gagcagagg 26555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 59183 - 59308
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||| ||||||||||| ||| | ||  ||||||  ||||||||||    
T  59183 cctgaacatgtctaataatgattaggacagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaacctgacc--gaactcgcca 59280  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  59281 tggcgagcagaggctctcgcctcgcgag 59308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 39611 - 39669
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga 59  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||    
T  39611 cctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaaga 39669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 40352 - 40112
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttggat-tctgaccctgaactcgcc 98  Q
    ||||||||||| || ||||||||||||| |||| ||| ||||||||| ||||| | ||||| ||||||||| ||||||||  ||||||| ||||||||||    
T  40352 cctgaacatgtttattaatgattaggaaggaatgtaggatgagattgaacctg-acagattgtagaatgaa-cttttggaaatctgacc-tgaactcgcc 40256  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    |||||||| |||||||||||||||||||||||||||||||||||||  ||||||| || |||| ||||||||||||||||||||||||||||||||| ||    
T  40255 acggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtaccttgttaggtgtttgcgacctttgttgcacgagttgttgagagttgaacctt 40156  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  40155 ggggtagtattgagacttaatgatgatgttaattataatctgtg 40112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 133; Significance: 4e-69; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 4949 - 4707
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt--agaatgaaacttttggattctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||  ||||||||||||| ||| ||||||| ||||||||||    
T  4949 cctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttgggaatctgacc-tgaactcgcc 4851  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    | ||||||||||||||||||| ||||||||||||||||||||| ||  || |||| | ||||| || |  ||| |||| ||||||| |||||||||| ||    
T  4850 atggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggattttgcgatcagtgtcgcacaagttgttaagagttgaacctt 4751  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  4750 ggggtagtattgagacttaatgatgatgttaattataatctgtg 4707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 12531 - 12289
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt--agaatgaaacttttggattctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||  ||||||||||||| ||| ||||||| ||||||||||    
T  12531 cctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttgggaatctgacc-tgaactcgcc 12433  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    | ||||||||||||||||||| ||||||||||||||||||||| ||  || |||| | ||||| || |  ||| |||| ||||||| |||||||||| ||    
T  12432 atggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggattttgcgatcagtgtcgcacaagttgttaagagttgaacctt 12333  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  12332 ggggtagtattgagacttaatgatgatgttaattataatctgtg 12289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 22483 - 22241
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt--agaatgaaacttttggattctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||  ||||||||||||| ||| ||||||| ||||||||||    
T  22483 cctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttgggaatctgacc-tgaactcgcc 22385  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    | ||||||||||||||||||| ||||||||||||||||||||| ||  || |||| | ||||| || |  ||| |||| ||||||| |||||||||| ||    
T  22384 atggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggattttgcgatcagtgtcgcacaagttgttaagagttgaacctt 22285  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  22284 ggggtagtattgagacttaatgatgatgttaattataatctgtg 22241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 8916 - 8675
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    |||||| |||||||||| ||||||||||||||| ||| ||||||||| |||| |||||||| || |||| ||||| ||| ||||||||| ||||||||||    
T  8916 cctgaatatgtctaatagtgattaggaaagaatgtaggatgagattgaacctagaaagattgtaaaatggaacttgtgggattctgacc-tgaactcgcc 8818  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    ||||| || ||||||||||||||||||| |||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||| ||    
T  8817 acggccagtagaggctctcgcctcgcgaatgacccagaaacagagtgtcttgttaggtttt-gcgacctttgttgcacgagttgttgagagttgaacctt 8719  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    || ||||||||  |||||||||| ||||||||||| ||||||||    
T  8718 ggagtagtattaagacttaatgatgatgttaattacaatctgtg 8675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 16279 - 16521
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattta-gaatgaaacttttggat-tctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||| ||||||  ||| ||| ||||||||||    
T  16279 cctgaacatgtctaataatgattaggaaagaatttagaatgagattgaacctggaaagattttcgaatgaaacgtttggaaatctaacc-tgaactcgcc 16377  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    | |||||||||||||||||||||||||||||||||| |||||||||| ||||||  | ||||| || || ||| |||| |||||||  ||||||||| ||    
T  16378 atggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgccttgttgggattttgcgatctgtgtcgcacaagttgttaggagttgaacctt 16477  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||||||||| |||||||||| ||||||||||||| ||||||    
T  16478 ggggtagtattgagacttaatgatgatgttaattatagtctgtg 16521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 9 - 242
Target Start/End: Original strand, 339639 - 339871
Alignment:
Q  9 tgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttggattctgaccctgaactcgccacggcgagc 107  Q
    |||||||||||||||||||| |||| ||| ||||||||| ||||||||||||| |||||||||  ||| ||| ||||||  |||||||||||||||||||    
T  339639 tgtctaataatgattaggaatgaatgtaggatgagattgaacctggaaagattgtagaatgaacttttgggaatctgaca-tgaactcgccacggcgagc 339737  T
Q  108 agaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggggtagta 207  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| || ||||| |||||||||||||||||| ||| || ||||||| |||||||||||    
T  339738 agaggctctcgcctcgcgagtgacccagaaatagagtgccttgtt-aggttttgcgacctttgttgcacgagtcgttaagggttgaaccttggggtagta 339836  T
Q  208 ttgggacttaatgaggatgttaattataatctgtg 242  Q
    ||| |||||||||| || |||||||||||||||||    
T  339837 ttgagacttaatgatgacgttaattataatctgtg 339871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 740 - 967
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||          ||| |||||||| ||| ||||||||| |||||||||||    
T  740 cctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct----------agattgaaacttgtgggattctgacc-tgaactcgcca 828  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| |||||||||||||||| |||| ||||||||||| ||     
T  829 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttgcgacctttgttgcacgaattgtcgagagttgaaccttt 927  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatct 239  Q
    |||||| |||  |||||||||| || ||||||||||||||    
T  928 gggtagcattaagacttaatgaagaggttaattataatct 967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 51564 - 51768
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    ||||||||||| ||||||||||||||| ||||| ||| ||||||||| ||||||||||||| | ||||||||||| ||| ||| ||||| ||||||||||    
T  51564 cctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaaagattgtcgaatgaaacttgtgggattttgacc-tgaactcgcc 51662  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||| |||||| || ||||| ||||||||||||||||||||| ||||||||||| ||    
T  51663 acggcgagcagaggctctcacctcgctagtgacccagaaacagagtgacttgtt-agattttgcgacctttgttgcacgagttgtcgagagttgaacctt 51761  T
Q  199 ggggtag 205  Q
    |||||||    
T  51762 ggggtag 51768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 32977 - 32826
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||| ||||||||||||||||||| | |||| |||||||| || ||||| ||  | |||||| |  ||| ||| | |   |||||||||||||    
T  32977 cctgaacatgtgtaataatgattaggaaagattctagattgagattgaacttggaatagtctaagaatggatttttgggagt-tacacctgaactcgcca 32879  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgtt 152  Q
     |||||| |||||| |||||||||||||  ||||||  ||||| || ||||||    
T  32878 tggcgagtagaggccctcgcctcgcgagctacccagttacagaatgccttgtt 32826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 111; Significance: 5e-56; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 49 - 242
Target Start/End: Complemental strand, 28223 - 28030
Alignment:
Q  49 acctggaaagatttagaatgaaacttttgga-ttctgaccctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtc 147  Q
    |||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  28223 acctggaaagatttagaatgaaactttttgaattctgacc-tgaactcgccacggcgagcaaaggctctcgcctcgcgagtgacccagaaacagagtgcc 28125  T
Q  148 ttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||| | | |||||  | || ||| |||| ||||||| |||||||||| |||||||||||||| |||||||||| |||||||||||||| |||||    
T  28124 ttgtcaggattttgcaatctgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataacctgtg 28030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28977 - 28924
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctgg 54  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  28977 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgg 28924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 111; Significance: 5e-56; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 16528 - 16323
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||||||||||| ||||||  || ||| | ||||||| | ||| |||||||    
T  16528 cctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctggaaagattgtagaattgaattttggaattctgaac-tgagctcgcca 16430  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||| ||||||| ||| |||||| |||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||    
T  16429 cggcgatcagaggccctcacctcgcaagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttg 16330  T
Q  200 gggtagt 206  Q
     ||||||    
T  16329 aggtagt 16323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 242
Target Start/End: Original strand, 32640 - 32880
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttggattctgaccctgaactcgccac 100  Q
    ||||||||||||||||||||||||||| || |  |||||||||||| ||||| |||||||| ||||||||  |||  || |   ||||| ||||||||||    
T  32640 ctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattttagaatgaatttttgtgagttgcaccct-aactcgccac 32738  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgg 200  Q
     ||||| |||||||| |||||||||||||||||| ||||||| |||||||||| | ||||| || || ||| |||| | ||||| |||||||||| ||||    
T  32739 agcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgttaggattttgcgatctgtgtcgcaccaattgttaagagttgaaccttgg 32838  T
Q  201 ggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||  ||||| ||| | ||||| ||||||||||||    
T  32839 ggtagtattgaaacttattgaaggtgttagttataatctgtg 32880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 46365 - 46125
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttggattctgaccctgaactcgccac 100  Q
    ||||||||||||||||||||||||||| || |  |||||||||||| ||||| |||||||| ||||||||  |||  || |   ||||| ||||||||||    
T  46365 ctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattttagaatgaatttttgtgagttgcaccct-aactcgccac 46267  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttgg 200  Q
     ||||| |||||||| |||||||||||||||||| ||||||| |||||||||| | ||||| || || ||| |||| | ||||| |||||||||| ||||    
T  46266 agcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgttaggattttgcgatctgtgtcgcaccaattgttaagagttgaaccttgg 46167  T
Q  201 ggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||  ||||| ||| | ||||| ||||||||||||    
T  46166 ggtagtattgaaacttattgaaggtgttagttataatctgtg 46125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 5801 - 6036
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||| | ||| ||||||||| |||||| |||||| | |||||||| ||  || ||||||||| |||||| |||    
T  5801 cctgaacatgtctaataatgattaggaaagattgtaggatgagattgaacctgggaagattattgaatgaaatttgcgggattctgacc-tgaacttgcc 5899  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| |||||| || ||||| ||||||||||||||||||| | |||||| |||| ||    
T  5900 acggcgagcagaggctctcgcctcgttagtgacccagaaacagagtgccttgtt-agattttgcgacctttgttgcacgagttatcgagagtggaacctt 5998  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataa 236  Q
    ||| ||| |||  |||||||||| ||||||||||||||    
T  5999 gggatagcattaagacttaatgatgatgttaattataa 6036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 345 - 163
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgga-ttctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||| || |||||| |||||||||||||    
T  345 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatttagaatgaaactttttgagttctga-cctgaactcgcca 247  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgt 183  Q
    | ||||| ||||||||||||| |||||||||||||||||||||||| ||||||| | ||||| || || ||| |||| ||||||    
T  246 cagcgagtagaggctctcgccacgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttgt 163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 104; Significance: 8e-52; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 13641 - 13411
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    |||||| |||||||||||||||||||||||||| ||| |||||| || ||||||||          |||||||| ||| ||||||||| |||||||||||    
T  13641 cctgaaaatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa----------tgaaacttgtggcattctgacc-tgaactcgcca 13553  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||| |||||| || ||||| ||||||||||||||||||||| || |||||||| |||    
T  13552 cggcgagcagaggctctcgcctcgcgagtgacctagaatcagagtgccttgtt-agattttgcgacctttgttgcacgagttgtcgacagttgaaccttg 13454  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    || ||| |||  |||||||||| ||||||||||||||| ||||    
T  13453 ggatagcattaagacttaatgatgatgttaattataatttgtg 13411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 104; Significance: 8e-52; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 3911 - 3681
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    |||||||||| ||| |||||||||||||||||| ||| ||||||||| ||||||||          |||||||| ||| ||||||||| |||||||||||    
T  3911 cctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctggaa----------tgaaacttgtgggattctgacc-tgaactcgcca 3823  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
     |||||||||||||||||| |||||||||||||| ||||||||||| ||||| | |  |||||||||||||||||||||||||||||||||||||| ||     
T  3822 tggcgagcagaggctctcgtctcgcgagtgacccggaaacagagtgccttgtga-gactttgtgacctttgttgcacgagttgttgagagttgaaccttt 3724  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||  |||||||||| || | |||||||||||||||    
T  3723 gggtagtattaagacttaatgaagaggctaattataatctgtg 3681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 7975 - 7745
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    |||||||||| ||| |||||||||||||||||| ||| ||||||||| ||||||||          |||||||| ||| ||||||||| |||||||||||    
T  7975 cctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctggaa----------tgaaacttgtgggattctgacc-tgaactcgcca 7887  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
     |||||||||||||||||| |||||||||||||| ||||||||||| ||||| | |  |||||||||||||||||||||||||||||||||||||| ||     
T  7886 tggcgagcagaggctctcgtctcgcgagtgacccggaaacagagtgccttgtga-gactttgtgacctttgttgcacgagttgttgagagttgaaccttt 7788  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||  |||||||||| || | |||||||||||||||    
T  7787 gggtagtattaagacttaatgaagaggctaattataatctgtg 7745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 10117 - 10347
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||          | |||||| ||| ||||||||| |||||||||||    
T  10117 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtgggattctgacc-tgaactcgcca 10205  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| |||| |||||||||||||||| |||||||||||  |     
T  10206 cggggagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttgcgaccattgttgcacgagttgtcgagagttgaaccctt 10304  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||| |||  |||||||| |  | |||||||||||||||||    
T  10305 gggtagaattaagacttaataataaggttaattataatctgtg 10347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 11204 - 11434
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||          |||||||| ||| || |||||| |||||||||||    
T  11204 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------tgaaacttgtgggatactgacc-tgaactcgcca 11292  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
     |||||| |||||||||| ||||||||||||| |||||||| |||| ||||||| | ||||| ||||||||||||||||||||| ||||||||||| ||     
T  11293 aggcgagaagaggctctcacctcgcgagtgacacagaaacaaagtgacttgtta-gattttgcgacctttgttgcacgagttgtagagagttgaaccttt 11391  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||| |||  |||||||||| || |||||||||||||||||    
T  11392 gggtagaattaagacttaatgatgaggttaattataatctgtg 11434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14080 - 14027
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctgg 54  Q
    |||||| |||| |||||||||||||| |||  |||||| |||||||||||||||    
T  14080 cctgaatatgtataataatgattaggtaagtttttagattgagattggacctgg 14027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 1757 - 1947
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||| | | ||||| |||||| ||||||    
T  1757 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttggaaatctga-cctgaattcgcca 1855  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg-ttaagtttttgtgacctttgttgcacgagttgttgagagtt 191  Q
     |||||||||||||||||||||||||||||||||||  ||||| || |||| ||| | ||||| || |||||| |||||||| ||||||||||    
T  1856 tggcgagcagaggctctcgcctcgcgagtgacccagttacagaatg-cttgtttaggattttgcgatctttgtcgcacgagtcgttgagagtt 1947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 1344 - 1114
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    |||||||||  |||||||||||||||||||||| ||| ||||||||| ||||||||          |||||||| ||| |||||||||  ||||||||||    
T  1344 cctgaacattactaataatgattaggaaagaatgtaggatgagattgaacctggaa----------tgaaacttgtgggattctgacca-gaactcgcca 1256  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
     |||||||||||||||||||||| |||||||||| |||||| |||| ||||| | |  |||| ||||||||||||||||||||||||||||||||||||     
T  1255 tggcgagcagaggctctcgcctcacgagtgacccggaaacaaagtgccttgtga-gactttgcgacctttgttgcacgagttgttgagagttgaactttt 1157  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||||  |||||||||| || | |||||||||||||||    
T  1156 gggtagtattaagacttaatgaagaggctaattataatctgtg 1114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 21265 - 21111
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttga 186  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||| || ||||| |||||||||||||||||||| | |    
T  21265 cctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccaaaaacagagtgacttgttgag-ttttgcgacctttgttgcacgagttgatca 21167  T
Q  187 gagttgaactttggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||| || ||||||||||  |||||||||| |||||||||||||| |||||    
T  21166 gagttgaacctttgggtagtattaagacttaatgaagatgttaattataacctgtg 21111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21331 - 21276
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa 56  Q
    |||||||||||||||||||||||| |||||||| ||| ||||||||| ||||||||    
T  21331 cctgaacatgtctaataatgattatgaaagaatgtaggatgagattgtacctggaa 21276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 642 - 862
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaactt-ttggat-tctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||| | ||||| ||||||| ||||||     |  |||||||||||| |||||  ||||||| ||||||||||    
T  642 cctgaacatgtctaataatgattaggaaagattgtagaacgagattgaacctggtttagtagagaatgaaacttgttggaaatctgacc-tgaactcgcc 740  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    | |||||||||||| || ||||||| |||||||| |||||||||| ||||||||| | ||||  ||||||||||||||||| ||||||||||||||| ||    
T  741 atggcgagcagaggttcccgcctcgtgagtgacctagaaacagagagtcttgttaggatttttcgacctttgttgcacgagctgttgagagttgaacctt 840  T
Q  199 ggggtagtattgggacttaatg 220  Q
    | |||||||||| |||||||||    
T  841 gaggtagtattgagacttaatg 862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 87 - 239
Target Start/End: Complemental strand, 39831 - 39679
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttga 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | | ||||| || || ||| |||| ||||||| |    
T  39831 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtcaggattttgcgatctgtgtcgcacaagttgttaa 39732  T
Q  187 gagttgaactttggggtagtattgggacttaatgaggatgttaattataatct 239  Q
    | ||||||| |||||||||||||| |||||||| | |||||||||||||||||    
T  39731 gggttgaaccttggggtagtattgagacttaataatgatgttaattataatct 39679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 20553 - 20426
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgga-ttctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  20553 cctgaacatgtctaataatgattaggaaagaatgtagaataagattgaacctggaaagatttagaatgaaacttttggagttctga-cctgagctcgcca 20455  T
Q  100 cggcgagcagaggctctcgcctcgcgagt 128  Q
    || ||||||||||||||||||||||||||    
T  20454 cgacgagcagaggctctcgcctcgcgagt 20426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 87 - 239
Target Start/End: Original strand, 74981 - 75133
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttga 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | | ||||| || || ||| |||| ||||||| |    
T  74981 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtcaggattttgcgatctgtgtcgcacaagttgttaa 75080  T
Q  187 gagttgaactttggggtagtattgggacttaatgaggatgttaattataatct 239  Q
    | ||||||| |||||||||||||| |||||||| | |||||||||||||||||    
T  75081 gggttgaaccttggggtagtattgagacttaataatgatgttaattataatct 75133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 13925 - 13695
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    |||||||||||||||||||||||||||||| || ||| ||||||||| ||||||||          | |||||| || |||||||| | |||||||||||    
T  13925 cctgaacatgtctaataatgattaggaaaggatgtagcatgagattgaacctggaa----------ttaaacttgtgagattctgagc-tgaactcgcca 13837  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||| || ||||| ||| ||||||||||||||||| ||||||||||| ||     
T  13836 cggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgtt-agattttgcgacttttgttgcacgagttgtcgagagttgaaccttt 13738  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
     ||||| |||  |||||||  | || |||||||||||||||||    
T  13737 cggtaggattaagacttaacaatgaggttaattataatctgtg 13695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 8 - 242
Target Start/End: Original strand, 15163 - 15386
Alignment:
Q  8 atgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaactttt-ggattctgaccctgaactcgccacggcgag 106  Q
    |||||||||||||||||||||||||| ||| ||||||||| ||||||||          | |||||| | ||||||||||| |||||||||||||| |||    
T  15163 atgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------taaaacttgtaggattctgacc-tgaactcgccacggagag 15251  T
Q  107 cagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggggtagt 206  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||||||||||||||||||| |||||||||    | ||||||     
T  15252 cagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttgcgacctttgttgcacgagttgtcgagagttgactcgttgggtagg 15350  T
Q  207 attgggacttaatgaggatgttaattataatctgtg 242  Q
    |||  |||||||| |  | |||||||||||||||||    
T  15351 attaagacttaataataaggttaattataatctgtg 15386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 693 - 838
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttggat-tctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||| ||||||||| ||||||||  ||||||| ||||||||||    
T  693 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaatctgaaaagattgtagaatgaa-cttttggaaatctgacc-tgaactcgcc 790  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgt 146  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||    
T  791 acggtgagcggaggctctcgcctcgcgagtgacccagaaacagagtgt 838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 2985 - 3072
Alignment:
Q  155 gtttttgtgacctttgttgcacgagttgttgagagttgaactttggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||| |||||    
T  2985 gtttttgcgacctgtgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgttaattataacctgtg 3072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 36 - 242
Target Start/End: Complemental strand, 10571 - 10363
Alignment:
Q  36 agaatgagattggacctggaaagattt-agaatgaaacttttgga--ttctgaccctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacc 132  Q
    |||||||||||| |||||||||||||| |||||||||  |||  |  |||||||| |||||||||||||||||||||||  || ||||||||||||||||    
T  10571 agaatgagattgaacctggaaagattttagaatgaaaaattttcaaattctgacc-tgaactcgccacggcgagcagagcttcccgcctcgcgagtgacc 10473  T
Q  133 cagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggggtagtattgggacttaatgaggatgttaatt 232  Q
     ||||||| |||| ||||||| | ||||| || || ||| |||| ||||||| |||||||||| |||||||||||||| |||||||| | |||||||||     
T  10472 tagaaacaaagtgccttgttaggattttgcgatctgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaataatgatgttaata 10373  T
Q  233 ataatctgtg 242  Q
    ||||||||||    
T  10372 ataatctgtg 10363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 4960 - 4723
Alignment:
Q  5 aacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttg--gattctgaccctgaactcgccacg 101  Q
    |||||||||| |||||| |||| |||| | ||||||||||||| ||||| |||||||| |||||||| ||||||  ||| | |||| ||  ||||||| |    
T  4960 aacatgtctattaatgactagggaagattgtagaatgagattgaacctgaaaagattttagaatgaa-cttttgtcgat-cagacc-tgtcctcgccatg 4864  T
Q  102 gcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggg 201  Q
    ||||||| ||||||||||||||| ||  ||||||||||||| || | ||||| | ||||| |||||||||||||||||||||| |||||||||| ||| |    
T  4863 gcgagcaaaggctctcgcctcgcaagctacccagaaacagaatgccatgttaggattttgcgacctttgttgcacgagttgttaagagttgaaccttgag 4764  T
Q  202 gtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    ||||||||| |||||| ||| ||||||||||||||| ||||    
T  4763 gtagtattgagacttattgaagatgttaattataatttgtg 4723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 743 - 926
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgga-ttctgaccctgaactcgcca 99  Q
    |||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||||          | |||||| |||| |||||||| |||||||||||    
T  743 cctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggaattctgacc-tgaactcgcca 831  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaac 195  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||| || |||||  ||||||||||||||| |||| |||||||||||    
T  832 cggcgagcagaggctctcgcctcgcgagtaacccagaaacagagtgacttgtt-agattttgcaacctttgttgcacgatttgtcgagagttgaac 926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 17688 - 17908
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaacttttgg-attctgaccctgaactcgcc 98  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||| ||||| ||||||||||||| ||| ||||||||| ||||||||||    
T  17688 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggatagattgtagaatgaaacttgtgggattctgacc-tgaactcgcc 17786  T
Q  99 acggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaacttt 198  Q
    ||||||                     ||| ||||||||| |||||| ||||||| ||||| | |||||||||||||||||||||||||| |||||| ||    
T  17787 acggcg---------------------agtcacccagaaatagagtgacttgttaggtttt-gcgacctttgttgcacgagttgttgagaattgaacctt 17864  T
Q  199 ggggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
     ||||||||||  |||||||||||||||||||||||||||||||    
T  17865 tgggtagtattaagacttaatgaggatgttaattataatctgtg 17908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 87 - 221
Target Start/End: Complemental strand, 2306 - 2173
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttga 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||| || ||||| ||||||||||||||||||||| ||    
T  2306 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacatgtt-agattttgcgacctttgttgcacgagttgtcga 2208  T
Q  187 gagttgaactttggggtagtattgggacttaatga 221  Q
    ||||||||| || |||||| |||  ||||||||||    
T  2207 gagttgaacctttgggtaggattaagacttaatga 2173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2382 - 2327
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa 56  Q
    ||||||| ||||||||||| |||||||| |||| ||| ||||||||| ||||||||    
T  2382 cctgaacgtgtctaataataattaggaaggaatgtaggatgagattgaacctggaa 2327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 87 - 241
Target Start/End: Complemental strand, 6964 - 6811
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttga 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| || ||||| ||||||||||||||||||||| ||    
T  6964 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataaacagagtgacatgtt-agattttgcgacctttgttgcacgagttgtcga 6866  T
Q  187 gagttgaactttggggtagtattgggacttaatgaggatgttaattataatctgt 241  Q
    ||||||||| || |||||| |||  || |||||||  | |||| |||||||||||    
T  6865 gagttgaacctttgggtaggattaagatttaatgataaggttatttataatctgt 6811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7040 - 6985
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa 56  Q
    ||||||| ||||||||||| |||||||| |||| ||| ||||||||| ||||||||    
T  7040 cctgaacgtgtctaataattattaggaaggaatgtaggatgagattgaacctggaa 6985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 366 - 135
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| | ||||||          | |||||| ||| ||||||||| |||||||||||    
T  366 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaa----------ttaaacttgtgggattctgacc-tgaactcgcca 278  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
     |||||||||||||||||||||||| ||||||||| ||  |||||| |||||||  ||||||  |||||||||||||||||||| || |||||||| ||     
T  277 tggcgagcagaggctctcgcctcgcaagtgacccataataagagtgacttgttagatttttgcaacctttgttgcacgagttgtcgacagttgaaccttt 178  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||| |||  |||||||  | || ||||| |||||||||||    
T  177 gggtaggattaagacttaacaatgaggttaagtataatctgtg 135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 5142 - 4911
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| | ||||||          | |||||| ||| ||||||||| |||||||||||    
T  5142 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaa----------ttaaacttgtgggattctgacc-tgaactcgcca 5054  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
     |||||||||||||||||||||||| ||||||||| ||  |||||| |||||||  ||||||  |||||||||||||||||||| || |||||||| ||     
T  5053 tggcgagcagaggctctcgcctcgcaagtgacccataataagagtgacttgttagatttttgcaacctttgttgcacgagttgtcgacagttgaaccttt 4954  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||| |||  |||||||  | || ||||| |||||||||||    
T  4953 gggtaggattaagacttaacaatgaggttaagtataatctgtg 4911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 15295 - 15426
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    |||||| |||| ||||||||||||||||||||| ||||||||||||| | ||||| ||| |||||||||||||||| ||| ||||| |||||||||||||    
T  15295 cctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaatctggatagattttagaatgaaactttgggaatctga-cctgaactcgcca 15393  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacc 132  Q
      |||||||||||||||||||||||||||||||    
T  15394 tagcgagcagaggctctcgcctcgcgagtgacc 15426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 2125 - 2250
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||| ||| | || |||||||  ||||||||||    
T  2125 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaatctgacc--gaactcgcca 2222  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  2223 tggcgagcagaggctctcgcctcgcgag 2250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 17221 - 17090
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| ||| |||||||| |||||||  || | ||| |||||||||||||    
T  17221 cctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaataaaactttgagaatatga-cctgaactcgcca 17123  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacc 132  Q
     ||||||||||||||||||||||||||||||||    
T  17122 tggcgagcagaggctctcgcctcgcgagtgacc 17090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 7471 - 7576
Alignment:
Q  21 attaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggat--tctgaccctgaactcgccacggcgagcagaggctctcg 118  Q
    ||||||||||||| ||| ||||||||| ||||||||||| |||||||||||| |||||||  |||||  |||||||||||| ||| ||||||||||||||    
T  7471 attaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaac-tttggataatctga--ctgaactcgccatggcaagcagaggctctcg 7567  T
Q  119 cctcgcgag 127  Q
    |||||||||    
T  7568 cctcgcgag 7576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 16709 - 16479
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||| ||          | |||||| ||| ||| |||||  ||||||| ||    
T  16709 cctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctgaaa----------ttaaacttatgggattttgacca-gaactcggca 16621  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||  | |||||||||||||||||||||| || | |||||||||||  |     
T  16620 cggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt-ggattttgtgacctttgttgcacgatttctcgagagttgaacgctt 16522  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||| |||  |||||||| | || ||||| |||||||||||    
T  16521 gggtaggattaagacttaataatgaggttaactataatctgtg 16479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 24331 - 24456
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggat--tctgaccctgaactcgcc 98  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||| |||| |||||| |||||||||||| |||||||  |||||  |||||||||||    
T  24331 cctgaacatgtctaatattgattaggaaagaatttaggatgagattgaacctagaaagacttagaatgaaac-tttggataatctga--ctgaactcgcc 24427  T
Q  99 acggcgagcagaggctctcgcctcgcgag 127  Q
    | |||||||||||||||||||||||||||    
T  24428 atggcgagcagaggctctcgcctcgcgag 24456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 52009 - 51833
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    |||||||| |||||||||||||||||||||||| ||| | ||||||| ||||||||          ||||||||  || ||||| ||| ||| |||||||    
T  52009 cctgaacaagtctaataatgattaggaaagaatgtaggacgagattgaacctggaa----------tgaaacttacgggattctaacc-tgagctcgcca 51921  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgaga 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||| ||||||||||||||||| ||||    
T  51920 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttgcgacttttgttgcacgagttgtcgaga 51833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 80012 - 80137
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||| | || |||||  ||||||||| ||    
T  80012 cctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctga--ctgaactcgaca 80109  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  80110 tggcgagcagaggctctcgcctcgcgag 80137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 133094 - 132967
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||||||||||| |||||||||||| |||||    |||| |||||||||||||    
T  133094 cctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactttagaatgaaa-ttttgtgaactgaacctgaactcgcca 132996  T
Q  100 cggcgagcagaggctctcgcctcgcgagt 128  Q
     ||||||||||||||||||||||||||||    
T  132995 tggcgagcagaggctctcgcctcgcgagt 132967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 58492 - 58527
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  58492 actcgccacggcgagcagatgctctcgcctcgcgag 58527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 187
Target Start/End: Complemental strand, 5276 - 5104
Alignment:
Q  3 tgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgccacg 101  Q
    |||| |||||||||||||||||||||||||| ||| ||||||||| ||||||||          |||||||| || | |||||||| |||||||||||||    
T  5276 tgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------tgaaacttgtgaggttctgacc-tgaactcgccacg 5188  T
Q  102 gcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgag 187  Q
    ||||| ||||||||| ||||||||||||||| |||||||||||| |||||||   |||||  ||||||||||||||||||||||||    
T  5187 gcgagtagaggctcttgcctcgcgagtgacctagaaacagagtgacttgtta--gttttgccacctttgttgcacgagttgttgag 5104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 32494 - 32264
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||| ||||||||||| | | ||||||||| ||||||||          | |||||| ||| ||||||||  |||||| ||||    
T  32494 cctgaacatgtctaataatgactaggaaagaatgtgggatgagattgaacctggaa----------ttaaacttgtgggattctgact-tgaacttgcca 32406  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||| ||  | ||||| |||||||||||| | |||||| |||||||||||  |     
T  32405 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagttactt-ttttgattttgcgacctttgttgctctagttgtcgagagttgaaccctt 32307  T
Q  200 gggtagtattgggacttaatgaggatgttaattataatctgtg 242  Q
    |||||| |||  |||||||  | || |||||||||||||||||    
T  32306 gggtaggattaagacttaacaatgaggttaattataatctgtg 32264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 4822 - 5005
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||          ||||  | | ||||||||||| |||||||||||     
T  4822 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat---------tgaacttatgggattctgacc-tgaactcgccaa 4911  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaac 195  Q
     | ||||||||| |||||||||||||||||| ||||||||||||| ||| ||  | ||||| ||||||||||||||||||||| |||||||||||    
T  4912 agagagcagaggatctcgcctcgcgagtgacacagaaacagagtgacttatt-ggattttgagacctttgttgcacgagttgtcgagagttgaac 5005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 12489 - 12611
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||| |||||||||||  |||||||||||||| | || |||||  ||||||||||||    
T  12489 cctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacatagaatgaaactttggagaatctga--ctgaactcgcca 12586  T
Q  100 cggcgagcagaggctctcgcctcgc 124  Q
     ||||||||||||||||||||||||    
T  12587 tggcgagcagaggctctcgcctcgc 12611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 469 - 344
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||| | |||||||| |||||| | || |||||  ||||||||||||    
T  469 cctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaatacttagaatggaactttggagaatctga--ctgaactcgcca 372  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  371 tggcgagcagaggctctcgcctcgcgag 344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 28960 - 29081
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||| ||||||||||| ||| | || |||||||  ||||| ||||    
T  28960 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctagaaagacttagaatgaaaatttagagaatctgacc--gaactagcca 29057  T
Q  100 cggcgagcagaggctctcgcctcg 123  Q
     |||||||||||||||||||||||    
T  29058 tggcgagcagaggctctcgcctcg 29081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 32524 - 32397
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||||||||||| |||||||||||| |||||    |||| |||||||||||||    
T  32524 cctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactttagaatgaaa-ttttgtgaactgaacctgaactcgcca 32426  T
Q  100 cggcgagcagaggctctcgcctcgcgagt 128  Q
     ||||||||||||||||| ||||||||||    
T  32425 tggcgagcagaggctctcacctcgcgagt 32397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 7974 - 8099
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||| | || ||| |  | ||||||||||    
T  7974 cctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctaa--cagaactcgcca 8071  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  8072 tggcgagcagaggctctcgcctcgcgag 8099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 567 - 422
Alignment:
Q  5 aacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttggattctgaccctgaactcgccacggc 103  Q
    ||||||||||||||||||||||||||| |  |||||||||||| || ||||||||||| ||||||||  |||  || | ||  ||||||||||||| |||    
T  567 aacatgtctaataatgattaggaaagattggagaatgagattgaacttggaaagattttagaatgaatttttgtgagt-tgcacctgaactcgccatggc 469  T
Q  104 gagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg 150  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||    
T  468 gagcagaggctctcgcctcgcgagtgacccagttacagaatgtcttg 422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 16099 - 15974
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||| ||||| ||||| | | ||||||| ||| | || |||||||  ||||||||||    
T  16099 cctgaatatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagactcaaaatgaaaatttagagaatctgacc--gaactcgcca 16002  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  16001 tggcgagcagaggctctcgcctcgcgag 15974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 17948 - 18008
Alignment:
Q  3 tgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattta 63  Q
    |||| |||| |||||||||||||| |||  |||||| ||||||||||||||| ||| ||||    
T  17948 tgaatatgtataataatgattaggcaagtttttagattgagattggacctgggaaggttta 18008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 10347 - 10226
Alignment:
Q  5 aacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgccacggc 103  Q
    |||||||||| || ||||||||||||||| ||| ||||||||| ||||||||||| |||||| |||||||| | || |||||  |||||||||||| |||    
T  10347 aacatgtctattattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaaggaaactttggagaatctga--ctgaactcgccatggc 10250  T
Q  104 gagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||||||||    
T  10249 gagcagaggctctcgcctcgcgag 10226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 9514 - 9639
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttg-gattctgaccctgaactcgcca 99  Q
    ||||||||||||||||| |||||| |||||||| ||| ||||||||| | ||||||||| ||||||||||||||| | || |||||  ||||||||| ||    
T  9514 cctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatctggaaagacttagaatgaaactttggagaatctga--ctgaactcgtca 9611  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  9612 tggcgagcagaggctctcgcctcgcgag 9639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 192
Target Start/End: Complemental strand, 1639 - 1536
Alignment:
Q  88 ctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgag 187  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||  |  |||| ||||||||||||||||||||| |||    
T  1639 ctgaactcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt-ggagtttgcgacctttgttgcacgagttgtcgag 1541  T
Q  188 agttg 192  Q
    |||||    
T  1540 agttg 1536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 192
Target Start/End: Complemental strand, 7616 - 7513
Alignment:
Q  88 ctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgag 187  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||  |  |||| ||||||||||||||||||||| |||    
T  7616 ctgaactcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt-ggagtttgcgacctttgttgcacgagttgtcgag 7518  T
Q  188 agttg 192  Q
    |||||    
T  7517 agttg 7513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 9517 - 9391
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    |||||||| ||||||||| |||||||||||||| |||| |||||||||||||||||||| |||||||||||  |||  ||  |||| |||||||||||||    
T  9517 cctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatgaatttttgtgaa-ctgaacctgaactcgcca 9419  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||| ||||||||||||||||||||    
T  9418 tggcgagtagaggctctcgcctcgcgag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 19707 - 19558
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttggattctgaccctgaactcgcca 99  Q
    |||||||||||||||||||||||||||| || |  |||||||||||| |||||||||||||| ||||||||  |||  |  | ||  |||||||||||||    
T  19707 cctgaacatgtctaataatgattaggaaggattggagaatgagattgaacctggaaagattttagaatgaatttttatgtgt-tgcacctgaactcgcca 19609  T
Q  100 cggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg 150  Q
     |||||||||||||||||||||||||| ||||||||  ||||| |||||||    
T  19608 tggcgagcagaggctctcgcctcgcgaatgacccagttacagaatgtcttg 19558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 2483 - 2609
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||| ||| ||||| ||||| |||||||||||| || || |  |||| |||||||||||||    
T  2483 cctgaacatgtctaataatgattaggaaagattggagaatgagtttgaacctgtaaagattttagaatgaaatttgtgaa--ctgaacctgaactcgcca 2580  T
Q  100 cggcgagcagaggctctcgcctcgcgagt 128  Q
     |||||| |||||||||||||||||||||    
T  2581 tggcgagtagaggctctcgcctcgcgagt 2609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 206
Target Start/End: Complemental strand, 12368 - 12165
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgccacg 101  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||| |||||||   ||| ||||||||  |||||||  |||| ||||||||||||| |    
T  12368 ctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaattaagaatgaactttttggaaactga-cctgaactcgccatg 12270  T
Q  102 gcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaactttggg 201  Q
    ||||| |||||||||| ||||||||||  ||||   |||||    ||  ||| | ||||| || ||||||  ||||||| |||||||||||||| |||||    
T  12269 gcgagtagaggctctcacctcgcgagttgcccaattacagaagccctgtttaggattttgcgatctttgtcacacgagtcgttgagagttgaaccttggg 12170  T
Q  202 gtagt 206  Q
    |||||    
T  12169 gtagt 12165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 28489 - 28616
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||||   |||| |||||||||||| |||  ||  |||| |||||||||||||    
T  28489 cctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctacgaagactttagaatgaaattttgtgaa-ctgaacctgaactcgcca 28587  T
Q  100 cggcgagcagaggctctcgcctcgcgagt 128  Q
     ||||||||||||||||||||||||||||    
T  28588 tggcgagcagaggctctcgcctcgcgagt 28616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7252 - 7126
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagattt-agaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| |||||||||||||| ||||||||  |||  ||  |||| |||||||||||||    
T  7252 cctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatttttgtgaa-ctgaacctgaactcgcca 7154  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||| |||||||||||||| |||||    
T  7153 tggcgagtagaggctctcgccttgcgag 7126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 47415 - 47233
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttgg-attctgaccctgaactcgccac 100  Q
    ||||| ||||||||||||||||||||| |||| ||| ||||||||| ||||||||          | |||||| ||| ||||||||| ||| ||||||||    
T  47415 ctgaatatgtctaataatgattaggaatgaatgtaggatgagattgaacctggaa----------ttaaacttgtgggattctgacc-tgagctcgccac 47327  T
Q  101 ggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaagtttttgtgacctttgttgcacgagttgttgagagttgaac 195  Q
    || | ||||||||||||||||||||||||||||| || ||||||| |||||| ||   | | ||||||||||||||||||||| |||||||||||    
T  47326 ggagcgcagaggctctcgcctcgcgagtgacccaaaaccagagtgacttgtt-agaaatggcgacctttgttgcacgagttgtcgagagttgaac 47233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 20106 - 20228
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||   ||| ||||||||  |||||||  |||| |||||||||||||     
T  20106 cctgaacatgtttaataatgagtaggaaagaatgtagaatgagattgaacctggattaattaagaatgaactttttggaagctga-cctgaactcgccat 20204  T
Q  101 ggcgagcagaggctctcgcctcgc 124  Q
    |||||| |||||||||||||||||    
T  20205 ggcgagtagaggctctcgcctcgc 20228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 1982 - 2108
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    |||||||||||||||||||||||||||||| |  |||||||||||| || |  ||||| |||||||||||| |||  ||  |||| |||||||||||||     
T  1982 ctgaacatgtctaataatgattaggaaagattggagaatgagattgaacataaaaagactttagaatgaaattttgtgaa-ctgaacctgaactcgccat 2080  T
Q  101 ggcgagcagaggctctcgcctcgcgagt 128  Q
    ||| ||||||||||||||||||||||||    
T  2081 ggcaagcagaggctctcgcctcgcgagt 2108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18638 - 18712
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt-tagaatgaaactt 74  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||||||||    
T  18638 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaactt 18712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 6561 - 6625
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgt 151  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  6561 cctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaatagagtgccttgt 6625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6508 - 6554
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattg 47  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  6508 cctgaacatgtctaataatgattaggaaagaatgtagaatgagattg 6554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 101835 - 101709
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||||||| ||| |||||||||||  || || | | ||| |||||||||||||    
T  101835 cctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaattttgtgaact-tga-cctgaactcgcca 101738  T
Q  100 cggcgagcagaggctctcgcctcgcgagt 128  Q
     |||||||||||||||| |||||| ||||    
T  101737 tggcgagcagaggctcttgcctcgggagt 101709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 1017 - 897
Alignment:
Q  4 gaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatttagaatgaaac--ttttggattctgaccctgaactcgccacg 101  Q
    |||||||||||||| |||||||||  |||| ||  ||||||| ||||||||||||| ||||||||||||   || |||||||| |||||||||||||| |    
T  1017 gaacatgtctaatattgattaggagtgaatgtaagatgagataggacctggaaagacttagaatgaaacaacttgggattctg-ccctgaactcgccatg 919  T
Q  102 gcgagcagaggctctcgcctcg 123  Q
    ||||||||| | ||||||||||    
T  918 gcgagcagatgttctcgcctcg 897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10248 - 10289
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatga 42  Q
    ||||||||||||||||||||||||| ||||| ||||||||||    
T  10248 cctgaacatgtctaataatgattagtaaagattttagaatga 10289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 10306 - 10347
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgagt 128  Q
    |||||||||||||  ||||| |||||||||||||||||||||    
T  10306 cctgaactcgccaaagcgagtagaggctctcgcctcgcgagt 10347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2765 - 2825
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaagatt 61  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||    
T  2765 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatt 2825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 45469 - 45596
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttg-gattctgaccctgaactcgcc 98  Q
    |||||| |||||||||||||||||||||||| |   ||||||||||| |||||| |||| |||||||||||  ||||| || | ||  ||||||||||||    
T  45469 cctgaatatgtctaataatgattaggaaagattggggaatgagattgaacctggtaagactttagaatgaattttttgtgaat-tgtacctgaactcgcc 45567  T
Q  99 acggcgagcagaggctctcgcctcgcgag 127  Q
    | |||||| ||||||||||||||||||||    
T  45568 atggcgagtagaggctctcgcctcgcgag 45596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 161126 - 161000
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaaaga-tttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||||||| ||| ||||||||| || |||||    |||| |||||| ||||||    
T  161126 cctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatg-aatttttgtgaactgaacctgaagtcgcca 161028  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||| |||||||||| |||| ||||    
T  161027 tggcgagtagaggctctcacctcacgag 161000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13288 - 13334
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattg 47  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||    
T  13288 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattg 13334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 12435 - 12381
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa 56  Q
    |||||||||| ||||||||||||||||||| |||||| |||||||| ||||||||    
T  12435 ctgaacatgtataataatgattaggaaagattttagattgagattgaacctggaa 12381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 10969 - 10842
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    ||||||||||| |||||||||||||||||||   |||| |||||||| |||||||| || || ||||||||  |||  || | |   |||||||||||||    
T  10969 cctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctggaatagtttaagaatgaatttttgtgagt-tacacctgaactcgcca 10871  T
Q  100 cggcgagcagaggctctcgcctcgcgagt 128  Q
      ||||| |||||||||||||||||||||    
T  10870 tagcgagtagaggctctcgcctcgcgagt 10842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3373 - 3318
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa 56  Q
    ||||||||||||||||||||||||||||||| |  ||| |||||||| ||||||||    
T  3373 cctgaacatgtctaataatgattaggaaagattggagattgagattgaacctggaa 3318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 10583 - 10540
Alignment:
Q  3 tgaacatgtctaataatgattaggaaagaatttagaatgagatt 46  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||    
T  10583 tgaacatgtctaataatgattaggaaagaatgtaggatgagatt 10540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 13381 - 13255
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    |||||||||||||||| |||||||||||||| |  ||| | |||||| |||||||| || || ||||||||  |||  || | ||  |||||||||||||    
T  13381 cctgaacatgtctaattatgattaggaaagattggagattaagattgaacctggaatagtttaagaatgaatttttgtgagt-tgcacctgaactcgcca 13283  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||| |||||| |||||||||||||    
T  13282 tggcgagtagaggccctcgcctcgcgag 13255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 205
Target Start/End: Original strand, 60479 - 60598
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg-ttaagtttttgtgacctttgttgcacgagttgttg 185  Q
    |||||||||||||  ||||| |||||||||||||||||||||  |||||  ||||| |   ||| ||| | |||||||| |||||| ||||||| ||||     
T  60479 cctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaatacattgtttagggttttgtgatctttgtcgcacgagatgtta 60578  T
Q  186 agagttgaactttggggtag 205  Q
     ||||||||| |||||||||    
T  60579 tgagttgaaccttggggtag 60598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 130348 - 130222
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgcca 99  Q
    |||||||||||||| | |||||||| ||||| | |||| |||||||| |||||||| || || |||||| |  ||| ||| |   ||| | |||||||||    
T  130348 cctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggaattacacc-taaactcgcca 130250  T
Q  100 cggcgagcagaggctctcgcctcgcgag 127  Q
     |||||||||||||||||||||||||||    
T  130249 tggcgagcagaggctctcgcctcgcgag 130222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 2324 - 2378
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctgga 55  Q
    ||||||||||||||||||||||||||||||| |  ||| |||||||| |||||||    
T  2324 cctgaacatgtctaataatgattaggaaagattggagattgagattgaacctgga 2378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 225692 - 225643
Alignment:
Q  157 ttttgtgacctttgttgcacgagttgttgagagttgaactttggggtagt 206  Q
    ||||| || |||||| ||||||||||||||||||||||| ||||||||||    
T  225692 ttttgcgatctttgtcgcacgagttgttgagagttgaaccttggggtagt 225643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 227929 - 227878
Alignment:
Q  5 aacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa 56  Q
    ||||||| ||||||||||||||||||| | |||| |||||||| ||||||||    
T  227929 aacatgtataataatgattaggaaagattctagattgagattgaacctggaa 227878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 7738 - 7864
Alignment:
Q  2 ctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa-agatttagaatgaaacttttggattctgaccctgaactcgccac 100  Q
    |||||||||| |||||||||||||||||||   |||| |||||||| |||| ||| || || ||||||||  ||| ||  |   ||| |||||||||||     
T  7738 ctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctagaatagtttaagaatgaatttttgggggttacacc-tgaactcgccat 7836  T
Q  101 ggcgagcagaggctctcgcctcgcgagt 128  Q
     ||||| |||||||||||||||||||||    
T  7837 agcgagtagaggctctcgcctcgcgagt 7864  T

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Target: scaffold0372 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 4875 - 4910
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4875 actcgccacggcgagcagatgctctcgcctcgcgag 4910  T

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Target: scaffold0116 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43464 - 43519
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa 56  Q
    |||||||||||||||| |||||||| ||||| | |||| |||||||| ||||||||    
T  43464 cctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaa 43519  T

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Target: scaffold0116; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 47384 - 47439
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctggaa 56  Q
    |||||||||||||||| |||||||| ||||| | |||| |||||||| ||||||||    
T  47384 cctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaa 47439  T

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Target: scaffold0029 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 61386 - 61421
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||||| ||||||||||||||||    
T  61386 actcgccacggcgagcagatgctctcgcctcgcgag 61421  T

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Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 65304 - 65337
Alignment:
Q  94 tcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    ||||||||||||||||| ||||||||||||||||    
T  65304 tcgccacggcgagcagatgctctcgcctcgcgag 65337  T

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Target: scaffold0530 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 708 - 754
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattg 47  Q
    ||||||||||| ||||||||||||||||||| | |||| ||||||||    
T  708 cctgaacatgtataataatgattaggaaagattgtagattgagattg 754  T

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Target: scaffold0357 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13648 - 13595
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctgg 54  Q
    ||||||||||| |||||||||||||| |||  |||||| |||||||| ||||||    
T  13648 cctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 13595  T

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Target: scaffold0123 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 25388 - 25343
Alignment:
Q  160 tgtgacctttgttgcacgagttgttgagagttgaactttggggtag 205  Q
    |||||||||||| ||||||||||||| ||||||| | |||||||||    
T  25388 tgtgacctttgtcgcacgagttgttgtgagttgatccttggggtag 25343  T

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Target: scaffold0040 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 103263 - 103316
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctgg 54  Q
    ||||||||||| |||||||||||||| |||  |||||| |||||||| ||||||    
T  103263 cctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 103316  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 80779 - 80726
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctgg 54  Q
    ||||||||||| |||||||||||||| |||  |||||| |||||||| ||||||    
T  80779 cctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 80726  T

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Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 128735 - 128775
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||||||||||||  ||||| ||||||||||||||||||||    
T  128735 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 128775  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 268169 - 268116
Alignment:
Q  1 cctgaacatgtctaataatgattaggaaagaatttagaatgagattggacctgg 54  Q
    ||||||||||| |||||||||||||| |||  |||||| |||||||| ||||||    
T  268169 cctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 268116  T

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Target: scaffold0184 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 3993 - 4033
Alignment:
Q  87 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 127  Q
    |||| |||||||| |||||||||| ||||||||||||||||    
T  3993 cctgtactcgccatggcgagcagatgctctcgcctcgcgag 4033  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 62592 - 62556
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgagt 128  Q
    |||||||| |||||||||| |||||||||||||||||    
T  62592 actcgccatggcgagcagatgctctcgcctcgcgagt 62556  T

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Target: scaffold0017 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 192757 - 192793
Alignment:
Q  92 actcgccacggcgagcagaggctctcgcctcgcgagt 128  Q
    |||||||| |||||||||| |||||||||||||||||    
T  192757 actcgccatggcgagcagatgctctcgcctcgcgagt 192793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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