View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13040_high_20 (Length: 535)
Name: NF13040_high_20
Description: NF13040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13040_high_20 |
 |  |
|
| [»] chr6 (4 HSPs) |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 453; Significance: 0; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 453; E-Value: 0
Query Start/End: Original strand, 24 - 535
Target Start/End: Complemental strand, 5921519 - 5921010
Alignment:
| Q |
24 |
gaggtatggcaagatctccatgaaagtttctctaaggttgatcgcattcgtattacaaatttgcgttcttctattaacaatttgaaacaaggtgcaaaat |
123 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5921519 |
gaggtatggcaagatctccatgaacgtatctctaaggttgatcgcatttgtattgcaaatttgcgttcttctattaacaatttgaaacaaggtgcaaaat |
5921420 |
T |
 |
| Q |
124 |
atgttcttgagtattttactgaattgaaagcgttatgggaagaactttcaccacatagaccaattccatcttgtatttgtgttcatgcttgccattgtga |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
5921419 |
atgttcttgagtattttactgaattgaaagcgttatgggaagaactttcatcacatagaccaattccatcttgtatttgtgttcatgcttgccgttgtga |
5921320 |
T |
 |
| Q |
224 |
tgctactagggttgctaagatttacagaactgaggatcaaatcatgcagtttttgactagtttgaatgataattttggggttgttaagactcaagttctt |
323 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5921319 |
tgctactagggttgctaagatttacagaactgaggatcaaatcatgcagtttttgactggtttgaatgataattttggggttgttaagactcaagttctt |
5921220 |
T |
 |
| Q |
324 |
cttcttgatcctcttcctcctctcaagaaggtttactctcttgtggtgcaagaagaaagcaataattctttaccaatttcagtctctgcttcagatgata |
423 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
5921219 |
cttcttgatcctcttcctccgctcaagaaggtttactctcttgtggtgcaagaagaaaacaataattctttaccaatttcagtcactgcttcagatgata |
5921120 |
T |
 |
| Q |
424 |
gtaacatacaattgaatgcttctgaggttaagaaatcacaaggacgtggtaaaggttctcttttgttcattctcaaaaacctactaggtattgcaccttt |
523 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
5921119 |
gtaacatacaattgaatgcttatgaggttaagaaatcacaaggacgtggtaaaggt--tcttttgttcattctcaaaaacctactacgtattgcaccttt |
5921022 |
T |
 |
| Q |
524 |
tgtcacaagact |
535 |
Q |
| |
|
|||||||||||| |
|
|
| T |
5921021 |
tgtcacaagact |
5921010 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 120 - 367
Target Start/End: Original strand, 26968195 - 26968443
Alignment:
| Q |
120 |
aaatatgttcttgagtattttactgaattgaaagcgttatgggaagaactttcaccacatagaccaattccatcttgtatttgtgttcatgcttgccatt |
219 |
Q |
| |
|
|||| ||||||||| ||||||||||| ||||| |||||| | |||||||| |||||||||| ||||| ||||| | ||||||||| |||| | || |
|
|
| T |
26968195 |
aaatctgttcttgaatattttactgagttgaagagtttatggtaggaactttcttcacatagacctattcctacttgtgtatgtgttcatccttgtcgtt |
26968294 |
T |
 |
| Q |
220 |
gtgatgctactagggttgctaagatttacagaactgaggatcaaatcatgcagtttttgactagtttgaatga-taattttggggttgttaagactcaag |
318 |
Q |
| |
|
|||| || ||||| ||||||||| | || |||| ||| || ||||| ||||| ||| ||||| |||||||||| |||||| | | ||||||||||| |
|
|
| T |
26968295 |
gtgaagcaactagagttgctaaggtgtatagaaatgaagaccaaattatgcaatttctgactggtttgaatgaccaattttaccatagataagactcaag |
26968394 |
T |
 |
| Q |
319 |
ttcttcttcttgatcctcttcctcctctcaagaaggtttactctcttgt |
367 |
Q |
| |
|
| | | ||||||||| ||||| ||||||| || |||||||||||||| |
|
|
| T |
26968395 |
tcatgttacttgatcctattccttctctcaataaagtttactctcttgt |
26968443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 341
Target Start/End: Original strand, 14813345 - 14813625
Alignment:
| Q |
61 |
ttgatcgcattcgtattacaaatttgcgttcttctattaacaatttgaaacaaggtgcaaaatatgttcttgagtattttactgaattgaaagcgttatg |
160 |
Q |
| |
|
||||||| ||||| ||| ||||||| |||||| || || |||||||||||||| |||||| |||| | || ||||| |||||| |||| | ||||| |
|
|
| T |
14813345 |
ttgatcgtattcgcattgcaaatttacgttctaacatcaataatttgaaacaaggatcaaaatctgttttggattatttcactgaaatgaagtccttatg |
14813444 |
T |
 |
| Q |
161 |
ggaagaactttcaccacatagaccaattccatcttgtatttgtgttcatgcttgccattgtgatgctactagggttgctaagatttacagaactgaggat |
260 |
Q |
| |
|
||| ||| | || |||||||||| || || |||| |||||||||| |||| | ||||| ||| ||| |||||||||||| | |||| ||||||| |
|
|
| T |
14813445 |
ggaggaattatcttcacatagacctatccctaattgttcttgtgttcatccttgtcgttgtgctgcatctaaagttgctaagattcatagaaatgaggat |
14813544 |
T |
 |
| Q |
261 |
caaatcatgcagtttttgactagtttgaatgataattttggggttgttaagactcaagttcttcttcttgatcctcttcct |
341 |
Q |
| |
|
|| || ||||| ||| | || | ||||||||| | ||| ||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
14813545 |
cagattatgcaatttcttacaggattgaatgatcaattttctgttgttagaactcaagttcttctccttgatcctcttcct |
14813625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 6340973 - 6341059
Alignment:
| Q |
303 |
gttgttaagactcaagttcttcttcttgatcctcttcctcctctcaagaaggtttactctcttgtggtgcaagaagaaagcaataat |
389 |
Q |
| |
|
||||| |||||||||||||||||| | ||||| |||||| | |||| |||||||| ||| | || || ||||||||||| |||||| |
|
|
| T |
6340973 |
gttgtgaagactcaagttcttcttatggatccacttccttcaatcaacaaggtttattctatggttgttcaagaagaaagtaataat |
6341059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 356; Significance: 0; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 24 - 531
Target Start/End: Complemental strand, 20325821 - 20325319
Alignment:
| Q |
24 |
gaggtatggcaagatctccatgaaagtttctctaaggttgatcgcattcgtattacaaatttgcgttcttctattaacaatttgaaacaaggtgcaaaat |
123 |
Q |
| |
|
||||||||||||||||| |||||| |||| ||||||| |||||| ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
20325821 |
gaggtatggcaagatcttcatgaacgtttttctaaggctgatcgtattcgtattgcaaatttgcgttcttccattaacaacttgaaacaaggtgcaaaat |
20325722 |
T |
 |
| Q |
124 |
atgttcttgagtattttactgaattgaaagcgttatgggaagaactttcaccacatagaccaattccatcttgtatttgtgttcatgcttgccattgtga |
223 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||| |||||||||||| | |||||||||||||||| |||||| |
|
|
| T |
20325721 |
ctgttcttgagtattttactgaattgaaatctttatgggaagaactttcatcacatagacctattccatcttgtgtgtgtgttcatgcttgccgttgtga |
20325622 |
T |
 |
| Q |
224 |
tgctactagggttgctaagatttacagaactgaggatcaaatcatgcagtttttgactagtttgaatgataattttggggttgttaagactcaagttctt |
323 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
20325621 |
tgctactagggtggctaagatttacagaactgaggatcaaattatgcagtttttgactggtttgaatgataattttggagttgttaagactcaagttctt |
20325522 |
T |
 |
| Q |
324 |
cttcttgatcctcttcctcctctcaagaaggtttactctcttgtggtgcaagaagaaagcaataattctttaccaatttcagtctctgcttcagatgata |
423 |
Q |
| |
|
|||||| |||||||||| ||||| || || ||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
20325521 |
cttcttaatcctcttccacctcttaataaagtttattctcttgtggtgcaagaagaaagcaataactctttaccaatttcaatctctgcttcagatgata |
20325422 |
T |
 |
| Q |
424 |
gtaacatacaattgaatgcttctgaggttaagaaatcacaaggacgtggtaaaggttctcttttgttcattctcaaaaacctactaggtattgcaccttt |
523 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||| |||||| ||||| ||| |
|
|
| T |
20325421 |
gtaacatacaattgaatgcttctgaggttaagaaatcccaaggacgtggtaaagg-----ttttgttaattctcaaaaacctaataggtactgcactttt |
20325327 |
T |
 |
| Q |
524 |
tgtcacaa |
531 |
Q |
| |
|
|||||||| |
|
|
| T |
20325326 |
tgtcacaa |
20325319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 15447310 - 15447400
Alignment:
| Q |
80 |
aaatttgcgttcttctattaacaatttgaaacaaggtgcaaaatatgttcttgagtattttactgaattgaaagcgttatgggaagaactt |
170 |
Q |
| |
|
|||||| ||||| || ||||||||| | ||||||||| ||| || |||| | |||||||| ||||| |||||||| ||||||||||||||| |
|
|
| T |
15447310 |
aaatttacgttcctccattaacaatctcaaacaaggttcaatatttgttttggagtatttcactgagttgaaagctttatgggaagaactt |
15447400 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 234 - 393
Target Start/End: Original strand, 11922982 - 11923141
Alignment:
| Q |
234 |
gttgctaagatttacagaactgaggatcaaatcatgcagtttttgactagtttgaatgataattttggggttgttaagactcaagttcttcttcttgatc |
333 |
Q |
| |
|
||||| |||||||||| |||| | |||||||||||||| ||| |||| | ||||||||| | ||| || | || ||||||||| | |||||||||| |
|
|
| T |
11922982 |
gttgccaagatttacataactaaagatcaaatcatgcaatttctgacaggcttgaatgatcaattttctgtattaaaaactcaagttttgcttcttgatc |
11923081 |
T |
 |
| Q |
334 |
ctcttcctcctctcaagaaggtttactctcttgtggtgcaagaagaaagcaataattctt |
393 |
Q |
| |
|
|| ||||| | || || |||||||||| ||||| || |||||||||||||||| |||| |
|
|
| T |
11923082 |
ctattccttccctgaacaaggtttacttccttgttgtttaagaagaaagcaataactctt |
11923141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 389
Target Start/End: Complemental strand, 16992354 - 16992268
Alignment:
| Q |
303 |
gttgttaagactcaagttcttcttcttgatcctcttcctcctctcaagaaggtttactctcttgtggtgcaagaagaaagcaataat |
389 |
Q |
| |
|
||||| |||||||||||||||||| | ||||| |||||| | |||| |||||||| ||| | || || ||||||||||| |||||| |
|
|
| T |
16992354 |
gttgtgaagactcaagttcttcttatggatccacttccttcaatcaacaaggtttattctatggttgttcaagaagaaagtaataat |
16992268 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 26470445 - 26470493
Alignment:
| Q |
85 |
tgcgttcttctattaacaatttgaaacaaggtgcaaaatatgttcttga |
133 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||| |||| ||||||||| |
|
|
| T |
26470445 |
tgcgttcttccattaacaatctgaaacaaggtgataaatctgttcttga |
26470493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 341
Target Start/End: Original strand, 10636669 - 10636949
Alignment:
| Q |
61 |
ttgatcgcattcgtattacaaatttgcgttcttctattaacaatttgaaacaaggtgcaaaatatgttcttgagtattttactgaattgaaagcgttatg |
160 |
Q |
| |
|
||||||| ||||| ||| ||||||| |||||| || || |||||||||||||| |||||| |||| | || ||||| |||||| |||| | ||||| |
|
|
| T |
10636669 |
ttgatcgtattcgcattgcaaatttacgttctaacatcaataatttgaaacaaggatcaaaatctgttttggattatttcactgaaatgaagtccttatg |
10636768 |
T |
 |
| Q |
161 |
ggaagaactttcaccacatagaccaattccatcttgtatttgtgttcatgcttgccattgtgatgctactagggttgctaagatttacagaactgaggat |
260 |
Q |
| |
|
||| ||| | || |||||||||| || || |||| |||||||||| |||| | ||||| ||| |||| |||||||||||| | |||| ||||||| |
|
|
| T |
10636769 |
ggaggaattatcttcacatagacctatccctaattgttcttgtgttcatccttgtcgttgtgctgcatctagagttgctaagattcatagaaatgaggat |
10636868 |
T |
 |
| Q |
261 |
caaatcatgcagtttttgactagtttgaatgataattttggggttgttaagactcaagttcttcttcttgatcctcttcct |
341 |
Q |
| |
|
|| || ||||| ||| | || | |||||||| | ||| ||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
10636869 |
cagattatgcaatttcttacaggattgaatgaccaattttctgttgttagaactcaagttcttctccttgatcctcttcct |
10636949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 341
Target Start/End: Original strand, 5237887 - 5238167
Alignment:
| Q |
61 |
ttgatcgcattcgtattacaaatttgcgttcttctattaacaatttgaaacaaggtgcaaaatatgttcttgagtattttactgaattgaaagcgttatg |
160 |
Q |
| |
|
||||||| ||||| ||| ||||||| |||||| || || |||||||||||||| ||||| |||| | || ||||| |||||| |||| | ||||| |
|
|
| T |
5237887 |
ttgatcgtattcgcattgcaaatttacgttctaacatcaataatttgaaacaaggattaaaatctgttttggattatttcactgaaatgaagtccttatg |
5237986 |
T |
 |
| Q |
161 |
ggaagaactttcaccacatagaccaattccatcttgtatttgtgttcatgcttgccattgtgatgctactagggttgctaagatttacagaactgaggat |
260 |
Q |
| |
|
||| ||| | || ||||||||| || || |||| |||||||||| |||| | ||||| ||| ||| |||||||||||| | |||| ||||||| |
|
|
| T |
5237987 |
ggaggaattatcttcacatagacatatccctaattgttcttgtgttcatccttgtcgttgtgctgcatctaaagttgctaagattcatagaaatgaggat |
5238086 |
T |
 |
| Q |
261 |
caaatcatgcagtttttgactagtttgaatgataattttggggttgttaagactcaagttcttcttcttgatcctcttcct |
341 |
Q |
| |
|
|| || ||||| ||| | || | ||||||||| | ||| ||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
5238087 |
cagattatgcaatttcttacaggattgaatgatcaattttctgttgttagaactcaagttcttctccttgatcctcttcct |
5238167 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 393
Target Start/End: Original strand, 22642017 - 22642215
Alignment:
| Q |
195 |
tgtatttgtgttcatgcttgccattgtgatgctactagggttgctaagatttacagaactgaggatcaaatcatgcagtttttgactagtttgaatgata |
294 |
Q |
| |
|
||||||||||| ||| | |||| ||||| |||||| | ||||| |||| | | ||||||||||||||||| ||||| ||||| ||| | ||||||||| |
|
|
| T |
22642017 |
tgtatttgtgtgcatccatgccggtgtgaagctactcgtgttgccaagactcatagaactgaggatcaaataatgcaatttttaactggcttgaatgatc |
22642116 |
T |
 |
| Q |
295 |
attttggggttgttaagactcaagttcttcttcttgatcctcttcctcctctcaagaaggtttactctcttgtggtgcaagaagaaagcaataattctt |
393 |
Q |
| |
|
| || || || |||||||| |||| | ||||||||||| ||| || | || |||||||| ||| | ||| | |||||||| ||||||||||||| |
|
|
| T |
22642117 |
aattctctgtggtaaagactcagattctattgcttgatcctctaccttctttgaataaggtttattctatggtgattcaagaagagagcaataattctt |
22642215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 25226927 - 25227044
Alignment:
| Q |
51 |
ttctctaaggttgatcgcattcgta-ttacaaatttgcgttcttctattaacaatttgaaacaaggtgcaaaatatgttcttgagtattttactgaattg |
149 |
Q |
| |
|
||||||||| |||||||| || | | || ||||| |||||||||| |||||||| | | ||||||| | |||||||| | |||||||| | |||| || |
|
|
| T |
25226927 |
ttctctaagattgatcgccttagaaattgcaaatatgcgttcttcctttaacaatcttagacaaggtaccaaatatgtgttagagtatttcattgaaatg |
25227026 |
T |
 |
| Q |
150 |
aaagcgttatgggaagaa |
167 |
Q |
| |
|
||||| |||||||||||| |
|
|
| T |
25227027 |
aaagctttatgggaagaa |
25227044 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 25571626 - 25571683
Alignment:
| Q |
235 |
ttgctaagatttacagaactgaggatcaaatcatgcagtttttgactagtttgaatga |
292 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
25571626 |
ttgctaagctttacagaaccaaggatcaaatcattcagtttttgactggtttgaatga |
25571683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 49728251 - 49728189
Alignment:
| Q |
61 |
ttgatcgcattcgtattacaaatttgcgttcttctattaacaatttgaaacaaggtgcaaaat |
123 |
Q |
| |
|
||||||||||||| ||| ||||| |||||||||| || |||||| | ||||| |||||||||| |
|
|
| T |
49728251 |
ttgatcgcattcgcattgcaaatatgcgttcttcaatcaacaatctcaaacagggtgcaaaat |
49728189 |
T |
 |
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Target: chr2 (Bit Score: 34; Significance: 0.0000000008; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 54 - 171
Target Start/End: Complemental strand, 34893243 - 34893126
Alignment:
| Q |
54 |
tctaaggttgatcgcattcgtattacaaatttgcgttcttctattaacaatttgaaacaaggtgcaaaatatgttcttgagtattttactgaattgaaag |
153 |
Q |
| |
|
||||| |||||||| ||||| ||| ||||| | ||||| || |||||||| | || |||||| | |||| ||| | |||||||||||||||||||||| |
|
|
| T |
34893243 |
tctaaagttgatcgtattcgcattgcaaatctacgttcctccattaacaacctcaagcaaggttccaaatctgtcttagagtattttactgaattgaaag |
34893144 |
T |
 |
| Q |
154 |
cgttatgggaagaacttt |
171 |
Q |
| |
|
| | ||||||||||||| |
|
|
| T |
34893143 |
ctctttgggaagaacttt |
34893126 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 13129139 - 13129185
Alignment:
| Q |
87 |
cgttcttctattaacaatttgaaacaaggtgcaaaatatgttcttga |
133 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
13129139 |
cgttcttccattaacaatttgaaacaaggtgataaatctgttcttga |
13129185 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 389
Target Start/End: Complemental strand, 20485189 - 20485103
Alignment:
| Q |
303 |
gttgttaagactcaagttcttcttcttgatcctcttcctcctctcaagaaggtttactctcttgtggtgcaagaagaaagcaataat |
389 |
Q |
| |
|
||||| |||||||||||||||||| | ||||| |||||| | |||| |||||||| ||| | || || ||||||||||| |||||| |
|
|
| T |
20485189 |
gttgtgaagactcaagttcttcttatggatccacttccttcaatcaacaaggtttattctatggttgttcaagaagaaagtaataat |
20485103 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 28016002 - 28016088
Alignment:
| Q |
303 |
gttgttaagactcaagttcttcttcttgatcctcttcctcctctcaagaaggtttactctcttgtggtgcaagaagaaagcaataat |
389 |
Q |
| |
|
||||| |||||||||||||||||| | ||||| |||||| | |||| |||||||| ||| | || || ||||||||||| |||||| |
|
|
| T |
28016002 |
gttgtgaagactcaagttcttcttatggatccacttccttcaatcaacaaggtttattctatggttgttcaagaagaaagtaataat |
28016088 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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