View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13040_high_32 (Length: 430)
Name: NF13040_high_32
Description: NF13040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13040_high_32 |
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Alignment Details
Target: chr8 (Bit Score: 370; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 21 - 412
Target Start/End: Complemental strand, 43034034 - 43033641
Alignment:
| Q |
21 |
gctgcaacatctgaagagggtattaattcagttacaactttgttacatagttactaaccatagttggtgccactaattatgttatgagcggctgcttgta |
120 |
Q |
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| T |
43034034 |
gctgcaacatctgaagagggtattaattcagttacaactttgttacatagttactaaccatagttggtgccactaattatgttatgagcggctgcttgta |
43033935 |
T |
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| Q |
121 |
ttcacgcgtccatgtaagaatcatagggcatctctgtgggtagac-ttggagaataatcttggagtaatcttaggaaacactttgaggtgtgaagtgagg |
219 |
Q |
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| T |
43033934 |
ttcatgcgtccatgtaagaatcatagggcatctctgtgggtagactttggagaataatcttggagtaatcttaggaaacactttgaggtgtgaagtgagg |
43033835 |
T |
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| Q |
220 |
aattcatgtaaactctctacatgacaaaagaatattagagagactgagaaatcaaaggaagagtgaaaataga-ggtcgaaagagatttagagatttttg |
318 |
Q |
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| T |
43033834 |
aattcatgtaaactctctacatgacaaaagaatattagagagactgagaaatcaaaggaagagtgaaaatagagggtcgaaagggatttagagatttttg |
43033735 |
T |
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| Q |
319 |
ttgggctgtttctcaacaatggaaagcaagggaccatgtaaactttattgtactggtttgtttatgctcatagtggattcattgttgctctctg |
412 |
Q |
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| T |
43033734 |
ttgggctgtttctcaacaatggaaagcaagggaccatgtaaactttattgtactggtttgtttatgctcatagtggattcattgttgctctctg |
43033641 |
T |
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