View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13040_high_58 (Length: 284)

Name: NF13040_high_58
Description: NF13040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13040_high_58
NF13040_high_58
[»] chr7 (50 HSPs)
chr7 (11-268)||(8435818-8436075)
chr7 (113-261)||(8368789-8368935)
chr7 (39-88)||(17212054-17212103)
chr7 (11-90)||(12211658-12211737)
chr7 (17-88)||(19421232-19421303)
chr7 (39-86)||(42814867-42814914)
chr7 (18-88)||(2751272-2751342)
chr7 (42-88)||(25333420-25333466)
chr7 (18-87)||(577681-577750)
chr7 (39-88)||(2103056-2103105)
chr7 (39-88)||(2344300-2344349)
chr7 (39-88)||(7176013-7176062)
chr7 (39-88)||(7275278-7275327)
chr7 (39-88)||(18044108-18044157)
chr7 (39-88)||(21217984-21218033)
chr7 (18-87)||(22696322-22696391)
chr7 (39-88)||(23854397-23854446)
chr7 (39-88)||(32849592-32849641)
chr7 (39-88)||(40543061-40543110)
chr7 (39-87)||(13332574-13332622)
chr7 (39-87)||(22119890-22119938)
chr7 (39-86)||(27312155-27312202)
chr7 (39-88)||(7799983-7800032)
chr7 (39-88)||(10091189-10091238)
chr7 (39-88)||(28089817-28089866)
chr7 (39-88)||(31713046-31713095)
chr7 (39-88)||(39145803-39145852)
chr7 (18-86)||(28646972-28647040)
chr7 (37-72)||(24686130-24686165)
chr7 (41-88)||(27009360-27009407)
chr7 (41-88)||(31197592-31197639)
chr7 (17-80)||(42913642-42913705)
chr7 (17-87)||(1469114-1469184)
chr7 (18-88)||(11997850-11997920)
chr7 (38-88)||(21370598-21370648)
chr7 (18-88)||(22638293-22638363)
chr7 (39-88)||(9683827-9683876)
chr7 (39-88)||(21835152-21835201)
chr7 (18-87)||(23012638-23012707)
chr7 (11-88)||(40332100-40332177)
chr7 (39-87)||(28003838-28003886)
chr7 (30-93)||(21574245-21574308)
chr7 (182-252)||(8410051-8410121)
chr7 (39-73)||(22703502-22703536)
chr7 (39-88)||(17197101-17197150)
chr7 (39-72)||(22299866-22299899)
chr7 (23-88)||(23330874-23330939)
chr7 (18-86)||(7262220-7262288)
chr7 (208-248)||(8395970-8396010)
chr7 (39-67)||(31273936-31273964)
[»] chr8 (34 HSPs)
chr8 (18-88)||(34694706-34694776)
chr8 (39-88)||(42643269-42643318)
chr8 (18-88)||(3734753-3734823)
chr8 (38-88)||(4718646-4718696)
chr8 (18-88)||(19471610-19471680)
chr8 (18-88)||(19542534-19542604)
chr8 (18-88)||(19590092-19590162)
chr8 (18-88)||(26168978-26169048)
chr8 (39-88)||(2618187-2618236)
chr8 (11-88)||(18128514-18128591)
chr8 (39-88)||(18532108-18532157)
chr8 (39-88)||(34237806-34237855)
chr8 (44-88)||(28088287-28088331)
chr8 (39-86)||(28193477-28193524)
chr8 (12-86)||(24018385-24018459)
chr8 (18-88)||(27746465-27746535)
chr8 (26-88)||(36848887-36848949)
chr8 (39-88)||(20305909-20305958)
chr8 (39-88)||(21092542-21092591)
chr8 (39-88)||(39349257-39349306)
chr8 (45-88)||(42328006-42328049)
chr8 (29-83)||(41070767-41070821)
chr8 (39-88)||(7558094-7558143)
chr8 (39-88)||(8042655-8042704)
chr8 (39-88)||(32879280-32879329)
chr8 (15-79)||(21239359-21239423)
chr8 (14-86)||(30911383-30911455)
chr8 (39-86)||(264550-264597)
chr8 (39-86)||(651324-651371)
chr8 (39-86)||(837059-837106)
chr8 (29-88)||(34639347-34639406)
chr8 (42-88)||(8387598-8387644)
chr8 (39-88)||(15259557-15259606)
chr8 (42-86)||(34571597-34571641)
[»] chr6 (23 HSPs)
chr6 (18-88)||(28672064-28672134)
chr6 (18-88)||(12591634-12591704)
chr6 (18-88)||(15360228-15360298)
chr6 (39-88)||(8479309-8479358)
chr6 (39-88)||(9238972-9239021)
chr6 (39-88)||(22576064-22576113)
chr6 (23-88)||(33499471-33499536)
chr6 (41-88)||(34147343-34147390)
chr6 (41-88)||(34159959-34160006)
chr6 (39-85)||(11448871-11448917)
chr6 (18-88)||(17420862-17420932)
chr6 (39-88)||(654297-654346)
chr6 (39-88)||(3222785-3222834)
chr6 (39-88)||(9843935-9843984)
chr6 (39-88)||(13753237-13753286)
chr6 (39-88)||(21982471-21982520)
chr6 (9-88)||(11007162-11007241)
chr6 (18-88)||(9208249-9208319)
chr6 (42-88)||(21148664-21148710)
chr6 (29-86)||(8260499-8260556)
chr6 (39-70)||(17706458-17706489)
chr6 (42-88)||(5360225-5360271)
chr6 (11-56)||(4044808-4044853)
[»] chr3 (41 HSPs)
chr3 (18-88)||(7485655-7485725)
chr3 (18-88)||(48977385-48977455)
chr3 (39-88)||(21362940-21362989)
chr3 (18-88)||(30257621-30257691)
chr3 (39-88)||(25344208-25344257)
chr3 (39-88)||(30807304-30807353)
chr3 (39-88)||(34492726-34492775)
chr3 (39-88)||(35492908-35492957)
chr3 (39-88)||(45529905-45529954)
chr3 (39-88)||(46576345-46576394)
chr3 (11-88)||(50582989-50583066)
chr3 (39-88)||(53424327-53424376)
chr3 (39-91)||(52821786-52821838)
chr3 (41-88)||(18177040-18177087)
chr3 (39-86)||(25379760-25379807)
chr3 (18-88)||(4252526-4252596)
chr3 (18-88)||(7470345-7470415)
chr3 (39-81)||(32151428-32151470)
chr3 (18-88)||(40133579-40133649)
chr3 (39-88)||(8456301-8456350)
chr3 (39-88)||(25289865-25289914)
chr3 (39-88)||(31537989-31538038)
chr3 (39-88)||(40940822-40940871)
chr3 (39-88)||(45272567-45272616)
chr3 (39-88)||(52455800-52455849)
chr3 (38-88)||(55287800-55287850)
chr3 (42-87)||(4462631-4462676)
chr3 (39-84)||(26174114-26174159)
chr3 (39-88)||(29915420-29915469)
chr3 (39-88)||(29964573-29964622)
chr3 (39-88)||(49258413-49258462)
chr3 (23-87)||(36660768-36660832)
chr3 (11-66)||(8958159-8958214)
chr3 (39-78)||(26108299-26108338)
chr3 (42-85)||(50195433-50195476)
chr3 (39-81)||(15566650-15566692)
chr3 (39-88)||(9842918-9842967)
chr3 (39-72)||(53234061-53234094)
chr3 (39-87)||(6041823-6041871)
chr3 (12-88)||(16140294-16140370)
chr3 (26-66)||(42430360-42430400)
[»] chr2 (25 HSPs)
chr2 (18-88)||(27269480-27269550)
chr2 (11-88)||(14946776-14946853)
chr2 (18-88)||(8192481-8192551)
chr2 (18-88)||(15037956-15038026)
chr2 (18-88)||(32526215-32526285)
chr2 (39-88)||(18976576-18976625)
chr2 (11-88)||(28194256-28194334)
chr2 (18-87)||(4852556-4852625)
chr2 (39-88)||(11941361-11941410)
chr2 (39-88)||(25293163-25293212)
chr2 (7-88)||(30466949-30467030)
chr2 (39-88)||(33827724-33827773)
chr2 (39-88)||(44946204-44946253)
chr2 (39-87)||(44976305-44976353)
chr2 (38-88)||(4567587-4567637)
chr2 (39-88)||(32845088-32845137)
chr2 (39-72)||(40997501-40997534)
chr2 (39-88)||(41313989-41314038)
chr2 (39-87)||(17324764-17324812)
chr2 (18-88)||(6714411-6714481)
chr2 (18-88)||(19054022-19054092)
chr2 (39-72)||(10582141-10582174)
chr2 (39-88)||(24196001-24196050)
chr2 (39-72)||(27290601-27290634)
chr2 (39-87)||(918850-918898)
[»] chr1 (38 HSPs)
chr1 (18-88)||(46607807-46607877)
chr1 (18-88)||(24216975-24217045)
chr1 (18-88)||(34778339-34778409)
chr1 (39-80)||(1378903-1378944)
chr1 (18-87)||(2272342-2272411)
chr1 (39-88)||(4621388-4621437)
chr1 (39-88)||(7197397-7197446)
chr1 (39-88)||(8077644-8077693)
chr1 (39-88)||(24674390-24674439)
chr1 (12-93)||(52135122-52135203)
chr1 (39-87)||(24122021-24122069)
chr1 (18-88)||(32729542-32729612)
chr1 (23-88)||(1138576-1138641)
chr1 (39-88)||(15059553-15059602)
chr1 (39-88)||(20487341-20487390)
chr1 (39-88)||(27455017-27455066)
chr1 (11-87)||(1378743-1378819)
chr1 (39-87)||(37349521-37349569)
chr1 (40-88)||(47091687-47091735)
chr1 (41-88)||(23232418-23232465)
chr1 (39-86)||(46113553-46113600)
chr1 (18-88)||(168198-168268)
chr1 (39-77)||(17935777-17935815)
chr1 (42-88)||(29057491-29057537)
chr1 (18-88)||(30677173-30677243)
chr1 (18-88)||(40802197-40802267)
chr1 (39-88)||(7766878-7766927)
chr1 (12-85)||(10059055-10059128)
chr1 (39-88)||(14258578-14258627)
chr1 (39-88)||(18533875-18533924)
chr1 (11-87)||(17447272-17447348)
chr1 (18-81)||(809226-809289)
chr1 (38-81)||(6776148-6776191)
chr1 (42-88)||(16899508-16899554)
chr1 (47-88)||(1486417-1486458)
chr1 (39-88)||(23734113-23734162)
chr1 (39-88)||(23741305-23741354)
chr1 (29-86)||(25496629-25496686)
[»] scaffold0068 (1 HSPs)
scaffold0068 (39-88)||(41795-41844)
[»] chr5 (46 HSPs)
chr5 (39-88)||(25750762-25750811)
chr5 (18-86)||(2499308-2499376)
chr5 (29-88)||(19145552-19145611)
chr5 (18-88)||(8484791-8484861)
chr5 (18-88)||(32059570-32059640)
chr5 (18-88)||(36954815-36954885)
chr5 (39-88)||(4603774-4603823)
chr5 (39-88)||(13108600-13108649)
chr5 (39-88)||(22392698-22392747)
chr5 (39-88)||(25586929-25586978)
chr5 (39-88)||(38631112-38631161)
chr5 (39-87)||(15971273-15971321)
chr5 (17-88)||(12317279-12317350)
chr5 (41-88)||(23270675-23270722)
chr5 (29-87)||(21042666-21042724)
chr5 (39-88)||(7085777-7085826)
chr5 (39-88)||(11926653-11926702)
chr5 (39-88)||(13038605-13038654)
chr5 (39-88)||(15641256-15641305)
chr5 (39-88)||(31288097-31288146)
chr5 (39-84)||(38684209-38684254)
chr5 (12-88)||(25343236-25343312)
chr5 (18-86)||(37397712-37397780)
chr5 (39-86)||(3715060-3715107)
chr5 (41-88)||(27487708-27487755)
chr5 (29-88)||(40330630-40330689)
chr5 (12-90)||(8780473-8780551)
chr5 (42-88)||(15931056-15931102)
chr5 (18-88)||(27498861-27498931)
chr5 (38-88)||(30485825-30485875)
chr5 (39-81)||(33709652-33709694)
chr5 (14-84)||(39459322-39459392)
chr5 (39-88)||(1827681-1827730)
chr5 (39-88)||(5067298-5067347)
chr5 (11-88)||(10399770-10399847)
chr5 (18-83)||(10869695-10869760)
chr5 (39-88)||(16616116-16616165)
chr5 (39-88)||(34049819-34049868)
chr5 (39-88)||(34310139-34310188)
chr5 (42-79)||(42193491-42193528)
chr5 (24-88)||(18172787-18172851)
chr5 (41-87)||(42006791-42006837)
chr5 (39-88)||(22253296-22253345)
chr5 (39-88)||(33025477-33025526)
chr5 (41-85)||(204177-204221)
chr5 (12-88)||(21236486-21236562)
[»] chr4 (35 HSPs)
chr4 (11-88)||(40058975-40059052)
chr4 (39-86)||(34722169-34722216)
chr4 (18-88)||(13873425-13873495)
chr4 (18-88)||(25852211-25852281)
chr4 (29-87)||(42245744-42245802)
chr4 (11-88)||(19660655-19660732)
chr4 (39-88)||(20566346-20566395)
chr4 (39-88)||(27528946-27528995)
chr4 (39-88)||(32986194-32986243)
chr4 (11-88)||(41621719-41621796)
chr4 (39-88)||(46714389-46714438)
chr4 (39-88)||(54127493-54127542)
chr4 (39-87)||(51535611-51535659)
chr4 (41-88)||(5609355-5609402)
chr4 (39-88)||(1985833-1985882)
chr4 (39-88)||(33696430-33696479)
chr4 (39-88)||(52983616-52983665)
chr4 (11-71)||(7093390-7093450)
chr4 (41-88)||(35674894-35674941)
chr4 (29-87)||(34835527-34835585)
chr4 (39-81)||(35229172-35229214)
chr4 (39-85)||(55961893-55961939)
chr4 (39-88)||(13550205-13550254)
chr4 (39-88)||(22625221-22625270)
chr4 (11-88)||(33992623-33992700)
chr4 (39-88)||(34844909-34844958)
chr4 (44-84)||(10125783-10125823)
chr4 (11-87)||(41085024-41085100)
chr4 (42-81)||(4911926-4911965)
chr4 (11-86)||(9646339-9646414)
chr4 (18-61)||(12500188-12500231)
chr4 (12-88)||(19220530-19220606)
chr4 (30-85)||(25969644-25969700)
chr4 (39-87)||(43719216-43719264)
chr4 (39-87)||(45787855-45787902)
[»] scaffold0576 (1 HSPs)
scaffold0576 (18-88)||(5212-5282)
[»] scaffold0199 (1 HSPs)
scaffold0199 (39-88)||(8558-8607)
[»] scaffold0623 (1 HSPs)
scaffold0623 (39-87)||(1207-1255)
[»] scaffold0459 (1 HSPs)
scaffold0459 (39-87)||(10844-10892)
[»] scaffold0366 (2 HSPs)
scaffold0366 (39-87)||(9450-9498)
scaffold0366 (39-87)||(12151-12199)
[»] scaffold0070 (1 HSPs)
scaffold0070 (38-88)||(40322-40372)
[»] scaffold0026 (1 HSPs)
scaffold0026 (18-88)||(97496-97566)
[»] scaffold0460 (1 HSPs)
scaffold0460 (39-88)||(8330-8379)
[»] scaffold0328 (1 HSPs)
scaffold0328 (39-88)||(14988-15037)
[»] scaffold0051 (1 HSPs)
scaffold0051 (39-88)||(53022-53071)
[»] scaffold0240 (1 HSPs)
scaffold0240 (39-86)||(12905-12952)
[»] scaffold0217 (1 HSPs)
scaffold0217 (39-86)||(7460-7507)
[»] scaffold0060 (1 HSPs)
scaffold0060 (199-248)||(61819-61868)
[»] scaffold0049 (1 HSPs)
scaffold0049 (39-88)||(66759-66808)
[»] scaffold0157 (1 HSPs)
scaffold0157 (18-61)||(20246-20289)
[»] scaffold0028 (1 HSPs)
scaffold0028 (29-88)||(27773-27832)
[»] scaffold0200 (1 HSPs)
scaffold0200 (42-88)||(26697-26743)
[»] scaffold0160 (1 HSPs)
scaffold0160 (18-86)||(29272-29340)


Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 11 - 268
Target Start/End: Original strand, 8435818 - 8436075
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatggttaatctttacattgatcaaat 110  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  8435818 cagaggaaatcgaacctaagatcttcaaaggagcaaactccaagatcccaagtcaaccactagaccaaccccaaatggttaatctttacattgatcaaat 8435917  T
Q  111 tctacaaataacaactgtaggtacagaaacaaacagagccaaaagatagcaaagttctgatcaaagctaaaataattcaactatggtttacatgatcatt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8435918 tctacaaataacaactgtaggtacagaaacaaacagagccaaaagatagcaaagttctgatcaaagctaaaataattcaactatggtttacatgatcatt 8436017  T
Q  211 aaaattgggcaagaccaatgtatttctttccatattgacaaaggacaaagtgcgttta 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8436018 aaaattgggcaagaccaatgtatttctttccatattgacaaaggacaaagtgcgttta 8436075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 113 - 261
Target Start/End: Original strand, 8368789 - 8368935
Alignment:
Q  113 tacaaataacaactgtaggtacagaaacaaacagagccaaaagatagcaaagttctgatcaaagctaaaataattcaactatggtttacatgatcattaa 212  Q
    |||||||||||| |||||| |||  |||||| || |||||||||||||||||||||| |||| |||||||||||||||| || || ||||| || ||| |    
T  8368789 tacaaataacaattgtaggcacaacaacaaa-ag-gccaaaagatagcaaagttctggtcaatgctaaaataattcaacaattgtatacataataattga 8368886  T
Q  213 aattgggcaagaccaatgtatttctttccatattgacaaaggacaaagt 261  Q
    |||  ||||||| |||||||||||||| || |||||||||| |||||||    
T  8368887 aatatggcaagaacaatgtatttctttgcacattgacaaagcacaaagt 8368935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 17212103 - 17212054
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17212103 aggagcaaactccaagatcccaagccaaccactaagccaaccccaaatgg 17212054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 12211658 - 12211737
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatggtt 90  Q
    ||||| ||||||||||| ||| ||| | ||||||| |||||||||||| ||| ||||||||| |||||||||||||||||    
T  12211658 cagaggaaatcaaacctgagatcttgagaggagcacactccaagatcctaagccaaccactaggccaaccccaaatggtt 12211737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 19421303 - 19421232
Alignment:
Q  17 aaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||| ||||| ||||||  | |||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  19421303 aaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaagtcaaccccaaatgg 19421232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 42814914 - 42814867
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42814914 aggagcaaactccaagatcccaagtcaaccactaagccaactccaaat 42814867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 2751342 - 2751272
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||   |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  2751342 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 2751272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 25333466 - 25333420
Alignment:
Q  42 agcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  25333466 agcaaactccaagatcccaagccaaccactaagccaaccccaaatgg 25333420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 577750 - 577681
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||| ||||||||||||| ||| |||||||||| |||||||||||  |||||||| ||||||||||||||    
T  577750 aatcgaacctaagaccttgaaatgagcaaactctaagatcccaagcaaaccactaggccaaccccaaatg 577681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 2103105 - 2103056
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  2103105 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 2103056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 2344349 - 2344300
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  2344349 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 2344300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 7176013 - 7176062
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  7176013 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 7176062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 7275327 - 7275278
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  7275327 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 7275278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 18044157 - 18044108
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  18044157 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 18044108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 21217984 - 21218033
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  21217984 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 21218033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 22696391 - 22696322
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||||||| ||||||| | ||||||| ||||||||||||||| |||||||||| ||||||||| ||||    
T  22696391 aatcaaacctgagaccttgagaggagcacactccaagatcccaaatcaaccactaggccaacccctaatg 22696322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 23854446 - 23854397
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  23854446 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 23854397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 32849641 - 32849592
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||    
T  32849641 aggagcaaactccaagatcccaagtcaaccactaggctaaccccaaatgg 32849592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 40543061 - 40543110
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  40543061 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 40543110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 13332574 - 13332622
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  13332574 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 13332622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 22119938 - 22119890
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  22119938 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 22119890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 27312202 - 27312155
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||    
T  27312202 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 27312155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 7799983 - 7800032
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||||    
T  7799983 aggagcaaactccaagatcccaagccaaccactaggtcaaccccaaatgg 7800032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 10091238 - 10091189
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  10091238 aggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgg 10091189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 28089866 - 28089817
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||| |||| ||||||||| |||||||||||||||    
T  28089866 aggagcaaactccaagatctcaagccaaccactaggccaaccccaaatgg 28089817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 31713046 - 31713095
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  31713046 aggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgg 31713095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 39145803 - 39145852
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||||||||||||| | ||||| |||||||    
T  39145803 aggagcaaactccaagatcccaagtcaaccactaggtcaacctcaaatgg 39145852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 28647040 - 28646972
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||| ||||| ||||||| | || |||| |||||||||||||||||||| ||||| |||||||||||||    
T  28647040 aatcgaacctgagaccttgagagaagcacactccaagatcccaagtcaatcactaggccaaccccaaat 28646972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 24686130 - 24686165
Alignment:
Q  37 aaaggagcaaactccaagatcccaagtcaaccacta 72  Q
    ||||||||||||||||||||||||||||||||||||    
T  24686130 aaaggagcaaactccaagatcccaagtcaaccacta 24686165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 27009407 - 27009360
Alignment:
Q  41 gagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||| ||| ||||||||| |||||||||||||||    
T  27009407 gagcaaactccaagatccgaagccaaccactaggccaaccccaaatgg 27009360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 31197639 - 31197592
Alignment:
Q  41 gagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||    
T  31197639 gagcaaactccaagatcccaagccaaccactagaccaaccccaaatgg 31197592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 42913642 - 42913705
Alignment:
Q  17 aaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaacc 80  Q
    ||||| ||||| ||||||  | |||||||||||||||||||||||| ||||||||| |||||||    
T  42913642 aaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaacc 42913705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 1469184 - 1469114
Alignment:
Q  17 aaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    ||||| ||||| ||||||| | | || |||||||||||||  |||||||||||||| ||||||||||||||    
T  1469184 aaatcgaacctgagaccttgagatgaacaaactccaagatttcaagtcaaccactaggccaaccccaaatg 1469114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 11997920 - 11997850
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| ||||||  | |||||||||||||||||||||||| |||||||||  |||||| |||||||    
T  11997920 aatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactagcccaaccacaaatgg 11997850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 21370648 - 21370598
Alignment:
Q  38 aaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||| |||||||||||||||||  ||||||||| |||||||||||||||    
T  21370648 aaggagtaaactccaagatcccaaaccaaccactaggccaaccccaaatgg 21370598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 22638363 - 22638293
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||  || |||||||||| |||||| ||||||||||||||  ||||||||||||||    
T  22638363 aatcgaacctgagacctttgaaagagcaaactctaagatctcaagtcaaccactagaccaaccccaaatgg 22638293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 9683876 - 9683827
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||| ||||| |||||||||||||| ||||||| |||||||    
T  9683876 aggagcaaactcccagatctcaagtcaaccactaggccaaccgcaaatgg 9683827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 21835201 - 21835152
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| | |||||| ||||||    
T  21835201 aggagcaaactccaagatcccaagccaaccactaggtcaaccctaaatgg 21835152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 23012638 - 23012707
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||||||||||||||    || ||||||||||||||||||||| ||||||||  |||||||| |||||    
T  23012638 aatcaaacctaagacctctggagaagcaaactccaagatcccaagccaaccactgggccaaccctaaatg 23012707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 40332177 - 40332100
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||| ||||| ||||| ||||||| | ||||||||||||||||||  |||| |||||||||  ||||| ||||||||    
T  40332177 cagaggaaatcgaacctgagacctttagaggagcaaactccaagatttcaagccaaccactagaccaactccaaatgg 40332100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 28003886 - 28003838
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||||||||||||||||||||| |||||||||   ||||||||||||    
T  28003886 aggagcaaactccaagatcccaagccaaccactagatcaaccccaaatg 28003838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 21574245 - 21574308
Alignment:
Q  30 gaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatggttaat 93  Q
    |||||| | ||||||| ||||||| |||||||  ||||||||| ||||||||||||||| ||||    
T  21574245 gaccttgagaggagcacactccaaaatcccaaaccaaccactaggccaaccccaaatgggtaat 21574308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 252
Target Start/End: Original strand, 8410051 - 8410121
Alignment:
Q  182 ataattcaactatggtttacatgatcattaaaattgggcaagaccaatgtatttctttccatattgacaaa 252  Q
    |||||||||| ||  | |||||||| ||||||||||||||||| || |||||||||||  | |||||||||    
T  8410051 ataattcaacaataatatacatgatgattaaaattgggcaagagcagtgtatttctttgtacattgacaaa 8410121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 22703536 - 22703502
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaa 73  Q
    |||||||||||||||||||||||| ||||||||||    
T  22703536 aggagcaaactccaagatcccaagccaaccactaa 22703502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 17197101 - 17197150
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||| |||  ||||||||| ||| |||||||||||    
T  17197101 aggagcaaactccaagatcgcaaaccaaccactaggccgaccccaaatgg 17197150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 72
Target Start/End: Complemental strand, 22299899 - 22299866
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccacta 72  Q
    |||||||||||||||||||||||| |||||||||    
T  22299899 aggagcaaactccaagatcccaagccaaccacta 22299866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 23330874 - 23330939
Alignment:
Q  23 aacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||| ||||||| | ||||||| |||| || |||||||| ||||||||| || ||||||||||||    
T  23330874 aacctgagaccttgagaggagcacactctaaaatcccaagccaaccactaggctaaccccaaatgg 23330939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 7262288 - 7262220
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||||||| | ||||||| | |||| || ||| ||||||| |||||||||||||||| ||||| |||||    
T  7262288 aatcaaacttgagaccttgagaggatcacactacaagatcacaagtcaaccactaagtcaacctcaaat 7262220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 8395970 - 8396010
Alignment:
Q  208 attaaaattgggcaagaccaatgtatttctttccatattga 248  Q
    ||||||||||||||||| |||||||||||||| || |||||    
T  8395970 attaaaattgggcaagagcaatgtatttctttacacattga 8396010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 31273964 - 31273936
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaac 67  Q
    |||||||||||||||||||||||||||||    
T  31273964 aggagcaaactccaagatcccaagtcaac 31273936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 7e-18; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 34694706 - 34694776
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||||||||||| | ||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  34694706 aatcgaacctaagaccttgagaggagcaaactccaagatcacaagtcaaccactagaccaaccccaaatgg 34694776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 42643269 - 42643318
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42643269 aggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgg 42643318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 3734753 - 3734823
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||   |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  3734753 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 3734823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 4718696 - 4718646
Alignment:
Q  38 aaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  4718696 aaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 4718646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 19471680 - 19471610
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||| ||||||    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  19471680 aatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 19471610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 19542604 - 19542534
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||| ||||||    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  19542604 aatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 19542534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 19590092 - 19590162
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||| ||||||    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  19590092 aatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 19590162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 26168978 - 26169048
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||  |||||||| |||||||| ||||||    
T  26168978 aatcaaacctgagaccttgagaggagcaaactccaagatcccaagcaaaccactaggccaaccctaaatgg 26169048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 2618236 - 2618187
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  2618236 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 2618187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 18128591 - 18128514
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||| |||| || |||||||||| ||||||||| ||| ||||||||||||||||||| | |||||| |||||||||    
T  18128591 cagagagaatcgaatctaagaccttgaaaggagcacacttcaagatcccaagtcaaccaatgagccaatcccaaatgg 18128514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 18532157 - 18532108
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  18532157 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 18532108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 34237806 - 34237855
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  34237806 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 34237855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 28088331 - 28088287
Alignment:
Q  44 caaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  28088331 caaactccaagatcccaagtcaaccactaagccaaccccagatgg 28088287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 28193524 - 28193477
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||    
T  28193524 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 28193477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 24018459 - 24018385
Alignment:
Q  12 agagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||| ||||| ||||| |||||||   ||||||||||||||||||||||||||||||||||   |||||||||||    
T  24018459 agaggaaatcgaacctcagacctttggaggagcaaactccaagatcccaagtcaaccactagatcaaccccaaat 24018385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 27746465 - 27746535
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||   |||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  27746465 aatcgaacctgagacctttggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgg 27746535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 36848887 - 36848949
Alignment:
Q  26 ctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| | ||||||||||||||| | |||||||||||||||| |||||||||||||||    
T  36848887 ctaaaaccttgagaggagcaaactccaaaaacccaagtcaaccactatgccaaccccaaatgg 36848949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 20305958 - 20305909
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  20305958 aggagcaaactctaagatcccaagccaaccactaggccaaccccaaatgg 20305909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 21092591 - 21092542
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  21092591 aggagcaaactctaagatcccaagccaaccactaggccaaccccaaatgg 21092542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 39349306 - 39349257
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  39349306 aggagcaaactccaagatcccaagccaaccactgggccaaccccaaatgg 39349257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 42328049 - 42328006
Alignment:
Q  45 aaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||| ||||||||| |||||||||||||||    
T  42328049 aaactccaagatcccaagccaaccactaggccaaccccaaatgg 42328006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 41070821 - 41070767
Alignment:
Q  29 agaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaacccca 83  Q
    ||||||| | || |||| |||||||||||||||||||||||||| ||||||||||    
T  41070821 agaccttgagagtagcacactccaagatcccaagtcaaccactaggccaacccca 41070767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 7558094 - 7558143
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||||||||  ||| |||| |||||||||||||||    
T  7558094 aggagcaaactccaagatcccaagctaactactaggccaaccccaaatgg 7558143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 8042704 - 8042655
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||| ||||| | |||||||||||||    
T  8042704 aggagcaaactccaagatcccaagccaagcactaggtcaaccccaaatgg 8042655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 32879329 - 32879280
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||||| |||||||||||||||||||||  ||||||||||||||    
T  32879329 aggaccaaactcgaagatcccaagtcaaccactagaccaaccccaaatgg 32879280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 21239423 - 21239359
Alignment:
Q  15 gaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaac 79  Q
    ||||||||||| | | ||||| |||||| || ||||||||||| |||| ||||||||||||||||    
T  21239423 gaaaatcaaacttgaaaccttgaaaggaacacactccaagatcgcaagccaaccactaagccaac 21239359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 30911383 - 30911455
Alignment:
Q  14 agaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||||||||||| | | ||||| | ||||||||||||||||||| ||| |||| || || |||||||||||||    
T  30911383 agaaaatcaaacatgaaaccttgagaggagcaaactccaagatctcaaatcaatcattaggccaaccccaaat 30911455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 264550 - 264597
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||||||||||| ||||||||||| ||||||||| |||||| ||||||    
T  264550 aggagcaaactcgaagatcccaagccaaccactaggccaacgccaaat 264597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 651371 - 651324
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||||||||||| ||||||||||| ||||||||| |||||| ||||||    
T  651371 aggagcaaactcgaagatcccaagccaaccactaggccaacgccaaat 651324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 837106 - 837059
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||||||||||| ||||||||||| ||||||||| |||||| ||||||    
T  837106 aggagcaaactcgaagatcccaagccaaccactaggccaacgccaaat 837059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 34639347 - 34639406
Alignment:
Q  29 agaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||| | ||||||| |||||||||||||||| |||||||||  | ||||||||||||    
T  34639347 agaccttgagaggagcacactccaagatcccaagccaaccactagactaaccccaaatgg 34639406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 8387598 - 8387644
Alignment:
Q  42 agcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||| |||||| |||| ||||||||| |||||||||||||||    
T  8387598 agcaaactctaagatctcaagacaaccactaggccaaccccaaatgg 8387644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 15259557 - 15259606
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||| |||||||||||||  |||||||||  ||||||||||||||    
T  15259557 aggagcaaaatccaagatcccaaaccaaccactagaccaaccccaaatgg 15259606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 34571641 - 34571597
Alignment:
Q  42 agcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||| ||| ||| ||| ||||||||||||||||||||||||||||    
T  34571641 agcacacttcaaaatctcaagtcaaccactaagccaaccccaaat 34571597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 7e-18; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 28672134 - 28672064
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||||||||||  | ||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  28672134 aatcgaacctaagacctctagaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 28672064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 12591704 - 12591634
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||   |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  12591704 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 12591634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 15360228 - 15360298
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||   |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  15360228 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 15360298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 8479358 - 8479309
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  8479358 aggagcacactccaagatcccaagtcaaccactaggccaaccccaaatgg 8479309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 9239021 - 9238972
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  9239021 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 9238972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 22576113 - 22576064
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  22576113 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 22576064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 33499536 - 33499471
Alignment:
Q  23 aacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||| ||||||| | |||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  33499536 aacctgagaccttgagaggagcaaactccaagatcccaagccaaccaccaggccaaccccaaatgg 33499471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 34147390 - 34147343
Alignment:
Q  41 gagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||    
T  34147390 gagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 34147343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 34160006 - 34159959
Alignment:
Q  41 gagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||    
T  34160006 gagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 34159959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 11448917 - 11448871
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaa 85  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  11448917 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaa 11448871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 17420932 - 17420862
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||| |||||||| ||||||| | ||||||||||||||||||||||| ||  |||||||| |||||    
T  17420932 aatcaaaccaaagaccttgaaaggagtacactccaagatcccaagtcaaccattagaccaaccccgaatgg 17420862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 654297 - 654346
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||||||||||| |||||| ||||| |||||||||    
T  654297 aggagcaaactccaagatcccaagtcagccactaggccaaacccaaatgg 654346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 3222785 - 3222834
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||||    
T  3222785 aggagcaaactgcaagatcccaagccaaccactaggccaaccccaaatgg 3222834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 9843984 - 9843935
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  9843984 aggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgg 9843935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 13753286 - 13753237
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||||||||    
T  13753286 aggagcaaactccaagatccaaagccaaccactaggccaaccccaaatgg 13753237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 21982471 - 21982520
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||||    
T  21982471 aggagcaaacttcaagatcccaagccaaccactaggccaaccccaaatgg 21982520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 11007241 - 11007162
Alignment:
Q  9 agcagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||  |||| ||||| |||||||   |||||||||||||||||||||||| |||||||||   |||||||||||||    
T  11007241 agcagagtgaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactagatcaaccccaaatgg 11007162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 9208319 - 9208249
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| ||||||| | |||||||||||||||||||||||  |||||||||   |||||||||||||    
T  9208319 aatcgaacctgagaccttgagaggagcaaactccaagatcccaatccaaccactagaacaaccccaaatgg 9208249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 21148664 - 21148710
Alignment:
Q  42 agcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||    
T  21148664 agcaaactccaagatcccaagccaaccactaggccaactccaaatgg 21148710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 8260499 - 8260556
Alignment:
Q  29 agaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    ||||||| ||||| |||||||| ||||| | || ||||||||||||||||||||||||    
T  8260499 agaccttaaaaggggcaaactctaagattcaaactcaaccactaagccaaccccaaat 8260556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 70
Target Start/End: Original strand, 17706458 - 17706489
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccac 70  Q
    ||||||||||||||||||||||||||||||||    
T  17706458 aggagcaaactccaagatcccaagtcaaccac 17706489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 5360225 - 5360271
Alignment:
Q  42 agcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||||| ||||||| | |||||| ||||||||    
T  5360225 agcaaactccaagatcccaagccaaccaccaggccaactccaaatgg 5360271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 4044853 - 4044808
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagat 56  Q
    ||||| ||||||||||||||||||| | |||||||||||| |||||    
T  4044853 cagaggaaatcaaacctaagaccttgagaggagcaaactctaagat 4044808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 7e-18; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 7485655 - 7485725
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7485655 aatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactatgccaaccccaaatgg 7485725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 48977455 - 48977385
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  48977455 aatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgg 48977385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 21362989 - 21362940
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21362989 aggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgg 21362940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 30257691 - 30257621
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||   |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  30257691 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 30257621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 25344208 - 25344257
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  25344208 aggagcaaactcgaagatcccaagtcaaccactaggccaaccccaaatgg 25344257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 30807304 - 30807353
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  30807304 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 30807353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 34492726 - 34492775
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  34492726 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 34492775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 35492957 - 35492908
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  35492957 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 35492908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 45529905 - 45529954
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  45529905 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 45529954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 46576394 - 46576345
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  46576394 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 46576345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 50583066 - 50582989
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||| ||||| ||||| | ||||| | |||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  50583066 cagaggaaatcgaacctgaaaccttaagaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgg 50582989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 53424327 - 53424376
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  53424327 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 53424376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 52821786 - 52821838
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatggtta 91  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||| ||||    
T  52821786 aggagcaaactccaagatcccaagtcaaccactaggccaacaccaaattgtta 52821838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 18177040 - 18177087
Alignment:
Q  41 gagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||    
T  18177040 gagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 18177087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 25379807 - 25379760
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||    
T  25379807 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 25379760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 4252526 - 4252596
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||| | ||||||| | ||||||| ||||||||||| |||| ||||||||| |||||||||||||||    
T  4252526 aatcaaacttgagaccttgagaggagcacactccaagatctcaagccaaccactaggccaaccccaaatgg 4252596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 7470345 - 7470415
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||   ||||||||||||||||||| |||||||||||||| || ||||||||||||    
T  7470345 aatcgaacctgagacctttggaggagcaaactccaagatctcaagtcaaccactaggcaaaccccaaatgg 7470415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 32151470 - 32151428
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccc 81  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  32151470 aggagcaaactccaagatcccaagtcaaccactaggccaaccc 32151428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 40133579 - 40133649
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||   ||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  40133579 aatcgaacctgagacctttggaggagcaaactccaaaatcccaagccaaccactaggccaaccccaaatgg 40133649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 8456301 - 8456350
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  8456301 aggagcaaactcgaagatcccaagccaaccactaggccaaccccaaatgg 8456350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 25289865 - 25289914
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  25289865 aggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgg 25289914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 31537989 - 31538038
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||||||||    
T  31537989 aggagcaaactccaagatcctaagccaaccactaggccaaccccaaatgg 31538038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 40940871 - 40940822
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  40940871 aggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgg 40940822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 45272567 - 45272616
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  45272567 aggagcaaactccaagatcccaagccaacgactaggccaaccccaaatgg 45272616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 52455800 - 52455849
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||||||    
T  52455800 aggagcaaactccaagatccctagccaaccactaggccaaccccaaatgg 52455849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 55287850 - 55287800
Alignment:
Q  38 aaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||| ||||| ||||| ||||||||| |||||||||||||||    
T  55287850 aaggagcaaactctaagattccaagccaaccactatgccaaccccaaatgg 55287800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 4462676 - 4462631
Alignment:
Q  42 agcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||||||||||||| |||| ||||||||| ||||||||||||||    
T  4462676 agcaaactccaagatctcaagccaaccactaggccaaccccaaatg 4462631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 26174159 - 26174114
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaa 84  Q
    |||||||||||||||||||||||| ||||||||| |||||| ||||    
T  26174159 aggagcaaactccaagatcccaagccaaccactaggccaactccaa 26174114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 29915420 - 29915469
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||||||||||||||| || | |||||| ||||||    
T  29915420 aggagcaaactccaagatcccaagtcaaccattaggtcaaccctaaatgg 29915469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 29964573 - 29964622
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||||||||||||||| || | |||||| ||||||    
T  29964573 aggagcaaactccaagatcccaagtcaaccattaggtcaaccctaaatgg 29964622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 49258413 - 49258462
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||| |||||||||||| ||||||||| || ||||||||||||    
T  49258413 aggagcaaactgcaagatcccaagccaaccactaggcaaaccccaaatgg 49258462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 36660832 - 36660768
Alignment:
Q  23 aacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    ||||| ||||||| | |||||||||||||||||||| ||  ||||||||| | ||||||||||||    
T  36660832 aacctgagaccttgagaggagcaaactccaagatcctaaaccaaccactaggtcaaccccaaatg 36660768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 8958159 - 8958214
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaa 66  Q
    ||||| ||||| ||| |||||||||  |||||||| ||||||||||||||||||||    
T  8958159 cagaggaaatcgaacataagacctttgaaggagcagactccaagatcccaagtcaa 8958214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 26108338 - 26108299
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaa 78  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  26108338 aggagcaaactccaagatcccaagccaaccactaggccaa 26108299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 50195433 - 50195476
Alignment:
Q  42 agcaaactccaagatcccaagtcaaccactaagccaaccccaaa 85  Q
    ||||||||||||||||||||| ||||||||| || |||||||||    
T  50195433 agcaaactccaagatcccaagacaaccactatgctaaccccaaa 50195476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 15566650 - 15566692
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccc 81  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||    
T  15566650 aggagcaaactccaagatctcaagccaaccactaggccaaccc 15566692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 9842967 - 9842918
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||| |||||||||||||||||  |||||||||  ||||||||||||||    
T  9842967 aggagaaaactccaagatcccaaaccaaccactagaccaaccccaaatgg 9842918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 53234061 - 53234094
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccacta 72  Q
    |||||||||||||||||||||||| |||||||||    
T  53234061 aggagcaaactccaagatcccaagccaaccacta 53234094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 6041823 - 6041871
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    ||||||||||||||||||  ||||||||||| || | ||||||||||||    
T  6041823 aggagcaaactccaagatttcaagtcaaccattagggcaaccccaaatg 6041871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 16140370 - 16140294
Alignment:
Q  12 agagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||| ||| | |||| || | |||||||| ||||||||||||||   || ||||| |||||||||||||||    
T  16140370 agagaaaatcgaacatgagactttgagaggagcaagctccaagatcccaaactaatcactaggccaaccccaaatgg 16140294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 42430400 - 42430360
Alignment:
Q  26 ctaagaccttcaaaggagcaaactccaagatcccaagtcaa 66  Q
    |||||||||| | ||||||| ||||||||||||||||||||    
T  42430400 ctaagaccttgagaggagcacactccaagatcccaagtcaa 42430360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 7e-18; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 27269480 - 27269550
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||| ||||| | |||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  27269480 aatcaaacctaaaacctttagaggagcaaactcgaagatcccaagccaaccactatgccaaccccaaatgg 27269550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 14946853 - 14946776
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||| ||||||| ||||| | ||||||||||| ||||||| |||||||||||||| |||||| ||||||||    
T  14946853 cagagaaaatcgaacctaaaaccttgagaggagcaaacttcaagatctcaagtcaaccactaggccaactccaaatgg 14946776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 8192481 - 8192551
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| ||||||| | ||||||| |||||||||||||||| ||||||||| |||||||||||||||    
T  8192481 aatcgaacctgagaccttgagaggagcacactccaagatcccaagccaaccactaggccaaccccaaatgg 8192551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 15038026 - 15037956
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||   ||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  15038026 aatcgaacctgagacctttggaggagcaaactccaagatcccgagtcaaccactaggccaaccccaaatgg 15037956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 32526215 - 32526285
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| ||||||| | ||||||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  32526215 aatcgaacctgagaccttgagaggagcaaacttcaagatcccaaatcaaccactaagccaactccaaatgg 32526285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 18976576 - 18976625
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  18976576 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 18976625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 28194256 - 28194334
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtc-aaccactaagccaaccccaaatgg 88  Q
    |||||| |||| ||||||||||||| | ||||||| |||||||||||||||| | || ||||| |||||||||||||||    
T  28194256 cagagagaatcgaacctaagaccttaagaggagcacactccaagatcccaagccaaatcactacgccaaccccaaatgg 28194334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 4852625 - 4852556
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||| ||||| |||||||   |||||||||||||||||| ||||||||||||||| | ||||||||||||    
T  4852625 aatcgaacctgagacctttggaggagcaaactccaagattccaagtcaaccactaggtcaaccccaaatg 4852556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 11941361 - 11941410
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  11941361 aggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgg 11941410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 25293212 - 25293163
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||    
T  25293212 aggagcaaactccaagatcccaagtcaaccactagaccaacctcaaatgg 25293163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 30466949 - 30467030
Alignment:
Q  7 gcagcagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||| |||| ||||| ||||||  | |||| |||||||||| |||||||  ||||||||| |||||||||||||||    
T  30466949 gcagcagagagaatcgaacctgagacctctagaggaacaaactccaatatcccaaaccaaccactaggccaaccccaaatgg 30467030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 33827724 - 33827773
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  33827724 aggagcaatctccaagatcccaagccaaccactaggccaaccccaaatgg 33827773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 44946204 - 44946253
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  44946204 aggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgg 44946253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 44976305 - 44976353
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  44976305 aggagcaaaccccaagatcccaagccaaccactaggccaaccccaaatg 44976353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 4567587 - 4567637
Alignment:
Q  38 aaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||| |||||||||||| |||| |||| |||||||||||||||    
T  4567587 aaggagcaaacttcaagatcccaagccaactactaggccaaccccaaatgg 4567637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 32845137 - 32845088
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||||||||  ||| |||| |||||||||||||||    
T  32845137 aggagcaaactccaagatcccaagctaactactaggccaaccccaaatgg 32845088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 40997501 - 40997534
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccacta 72  Q
    ||||||||||||||||||||||||||||||||||    
T  40997501 aggagcaaactccaagatcccaagtcaaccacta 40997534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 41314038 - 41313989
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||  ||||||||| | |||||||||||||    
T  41314038 aggagcaaactccaagatcccaaaccaaccactacggcaaccccaaatgg 41313989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 17324812 - 17324764
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||||||||||||||| ||||  ||||||||| ||||||||||||||    
T  17324812 aggagcaaactccaagataccaaaccaaccactaggccaaccccaaatg 17324764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 6714411 - 6714481
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||| ||||||    ||||||||||||||||||| |||| |||||| || ||||| |||||||||    
T  6714411 aatcaaacctgagacctctggaggagcaaactccaagatctcaagccaaccattaggccaatcccaaatgg 6714481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 19054092 - 19054022
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||| |||||||   ||||||| ||||||||||| |||| ||| ||||| ||| |||||||||||    
T  19054092 aatcaaacctgagacctttggaggagcagactccaagatctcaagccaatcactaggcccaccccaaatgg 19054022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 10582141 - 10582174
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccacta 72  Q
    |||||||||||||||||||||||| |||||||||    
T  10582141 aggagcaaactccaagatcccaagccaaccacta 10582174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 24196050 - 24196001
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||| ||| |||| |||||||| ||||||||| |||||||||||||||    
T  24196050 aggagcgaaccccaaaatcccaagccaaccactaggccaaccccaaatgg 24196001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 72
Target Start/End: Complemental strand, 27290634 - 27290601
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccacta 72  Q
    |||||||||||||||||||||||| |||||||||    
T  27290634 aggagcaaactccaagatcccaagccaaccacta 27290601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 918850 - 918898
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    ||||||||||| ||| |||||||| ||||||||| | ||||||||||||    
T  918850 aggagcaaacttcaaaatcccaagccaaccactaggtcaaccccaaatg 918898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 46607877 - 46607807
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  46607877 aatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgg 46607807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 24217045 - 24216975
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| ||||||| | ||||||| |||||||||||||||||||||||||| | |||||||||||||    
T  24217045 aatcgaacctgagaccttgagaggagcacactccaagatcccaagtcaaccactaggtcaaccccaaatgg 24216975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 34778409 - 34778339
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||| ||||||    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  34778409 aatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 34778339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 1378944 - 1378903
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaacc 80  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1378944 aggagcaaactccaagatcccaagtcaaccactaagccaacc 1378903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 2272411 - 2272342
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||||||| ||||||    |||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  2272411 aatcaaacctgagacctctgtaggagcaaactctaagatcccaagtcaaccactaggccaaccccaaatg 2272342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 4621388 - 4621437
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  4621388 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 4621437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 7197397 - 7197446
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  7197397 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 7197446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 8077693 - 8077644
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  8077693 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 8077644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 24674439 - 24674390
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  24674439 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 24674390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 52135203 - 52135122
Alignment:
Q  12 agagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatggttaat 93  Q
    ||||| |||| ||||| |||| || | | ||||||||||||||||||||||||||||||||  |||||||||||||| ||||    
T  52135203 agagataatcgaacctgagacattgagatgagcaaactccaagatcccaagtcaaccactagaccaaccccaaatggataat 52135122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 24122069 - 24122021
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  24122069 aggagcaaaccccaagatcccaagccaaccactaagccaaccccaaatg 24122021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 32729612 - 32729542
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||| || | |||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  32729612 aatcgaacctgagactttgagaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaatgg 32729542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 1138641 - 1138576
Alignment:
Q  23 aacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||| | ||||||| ||||||||||| |||| ||||||||| | |||||||||||||    
T  1138641 aacctaagaccttgagaggagcacactccaagatctcaagccaaccactaggtcaaccccaaatgg 1138576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 15059553 - 15059602
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||||||||    
T  15059553 aggagcaaactccaagattccaagccaaccactaggccaaccccaaatgg 15059602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 20487341 - 20487390
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||||| || |||||||||| ||||||||||||||    
T  20487341 aggagcaaactccaagatcccgagccaaccactaaaccaaccccaaatgg 20487390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 27455017 - 27455066
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  27455017 aggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgg 27455066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 1378819 - 1378743
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    ||||||||||| ||| | |||||||   ||||| |||||||||||| |||||||||||||||  |||||||||||||    
T  1378819 cagagaaaatcgaacatgagacctttggaggagtaaactccaagattccaagtcaaccactagaccaaccccaaatg 1378743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 37349569 - 37349521
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||||||||| |||||| ||||||||||||||| |||||||||||||    
T  37349569 aggagcaaactctaagatctcaagtcaaccactaaaccaaccccaaatg 37349521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 47091735 - 47091687
Alignment:
Q  40 ggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||| |||| ||||||||| |||||||||||||||    
T  47091735 ggagcaaactccaagatctcaagccaaccactaggccaaccccaaatgg 47091687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 23232418 - 23232465
Alignment:
Q  41 gagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||| |||||||||||||||||||||| ||||| |||||||||    
T  23232418 gagcaaacttcaagatcccaagtcaaccactaggccaatcccaaatgg 23232465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 46113553 - 46113600
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||    
T  46113553 aggagcaaactccaagatcccaaaccaaccactaggccaaccccaaat 46113600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 168268 - 168198
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||  || |||||||||| ||||||||||| ||||||||| |||||| ||||||||    
T  168268 aatcgaacctgagacctttgaaagagcaaactctaagatcccaagccaaccactaggccaactccaaatgg 168198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 17935815 - 17935777
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagcca 77  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  17935815 aggagcaaactccaagatcccaagtcaaccactatgcca 17935777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 29057491 - 29057537
Alignment:
Q  42 agcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||||  ||||||||| |||||||||||||||    
T  29057491 agcaaactccaagatcccaaaccaaccactaggccaaccccaaatgg 29057537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 30677243 - 30677173
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||| |||||||   ||||||||||||| |||||||||  ||||||||| | |||||||||||||    
T  30677243 aatcaaacctgagacctttggaggagcaaactcctagatcccaaaccaaccactaggtcaaccccaaatgg 30677173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 40802197 - 40802267
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||| | ||||||| | | ||||||||||||| ||| |||| ||||||| |||||||||||||||||    
T  40802197 aatcaaacatgagaccttgagatgagcaaactccaatatctcaagccaaccacaaagccaaccccaaatgg 40802267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 7766878 - 7766927
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||||||||  |||||||| ||||||||| |||||    
T  7766878 aggagcaaactccaagatcccaagctaaccactaggccaaccccgaatgg 7766927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 10059128 - 10059055
Alignment:
Q  12 agagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaa 85  Q
    ||||| ||| |||||| |||| || | ||||||||||||||||||| |||||||||||||| || || ||||||    
T  10059128 agagagaattaaacctgagactttgagaggagcaaactccaagatctcaagtcaaccactaggctaatcccaaa 10059055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 14258578 - 14258627
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||||||||||||||||| ||||||||| ||||| |||||||||    
T  14258578 aggaacaaactccaagatcccaagccaaccactaggccaagcccaaatgg 14258627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 18533875 - 18533924
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||| |||||| |||||||||||||| | |||||||||||||    
T  18533875 aggagcaaactctaagatctcaagtcaaccactatgtcaaccccaaatgg 18533924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 17447348 - 17447272
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||| |||||||||  ||||||||| || |||| ||||||||||| ||| ||||||| |  ||||||||||||||    
T  17447348 cagagagaatcaaaccagagaccttcagagaagcacactccaagatctcaaatcaaccattgggccaaccccaaatg 17447272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 809289 - 809226
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccc 81  Q
    |||||||||| ||||||| | ||||| |||||||||||||||||  ||||||| | ||||||||    
T  809289 aatcaaacctgagaccttaagaggagtaaactccaagatcccaaaccaaccacgaggccaaccc 809226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 6776191 - 6776148
Alignment:
Q  38 aaggagcaaactccaagatcccaagtcaaccactaagccaaccc 81  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||    
T  6776191 aaggagcaaactccaagatcccaaaccaaccactaggccaaccc 6776148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 16899554 - 16899508
Alignment:
Q  42 agcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||||||||  |||||||||||||| |||||||||||||||    
T  16899554 agcacactccaagattacaagtcaaccactaggccaaccccaaatgg 16899508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 1486458 - 1486417
Alignment:
Q  47 actccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||| ||||||||| | |||||||||||||    
T  1486458 actccaagatcccaagccaaccactaggtcaaccccaaatgg 1486417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 23734162 - 23734113
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||| || ||||||||||| |||| ||||| ||||||||||||||    
T  23734162 aggagcaaattctaagatcccaagccaactactaaaccaaccccaaatgg 23734113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 23741354 - 23741305
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||| || ||||||||||| |||| ||||| ||||||||||||||    
T  23741354 aggagcaaattctaagatcccaagccaactactaaaccaaccccaaatgg 23741305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 25496629 - 25496686
Alignment:
Q  29 agaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    ||||||| | |||||||| ||||||||||||||| ||| ||||| |||||| ||||||    
T  25496629 agaccttaagaggagcaatctccaagatcccaagccaatcactaggccaacgccaaat 25496686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 41795 - 41844
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41795 aggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgg 41844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 25750762 - 25750811
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25750762 aggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgg 25750811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 2499308 - 2499376
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||| ||||| |||| || ||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  2499308 aatcgaacctgagactttgaaaggagcaaattccaagatcccaagtcagccactaagccaaccccaaat 2499376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 19145552 - 19145611
Alignment:
Q  29 agaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||| | ||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  19145552 agaccttgagaggagcatactccaagatcccaagtcaaccactaggccaaccccaaatgg 19145611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 8484791 - 8484861
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||| ||||||    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  8484791 aatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 8484861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 32059570 - 32059640
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||   |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  32059570 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 32059640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 36954885 - 36954815
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| ||||||  | |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  36954885 aatcgaacctgagacctctagaggagcaaactccaagatcccaaggcaaccactaggccaaccccaaatgg 36954815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 4603823 - 4603774
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  4603823 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 4603774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 13108600 - 13108649
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  13108600 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 13108649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 22392747 - 22392698
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  22392747 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 22392698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 25586978 - 25586929
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  25586978 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 25586929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 38631112 - 38631161
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  38631112 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 38631161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 15971273 - 15971321
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  15971273 aggagcaaactccaagatcccaagccaaccactaagccaaccctaaatg 15971321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 12317279 - 12317350
Alignment:
Q  17 aaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||  ||||||  | |||||||||||||||||| ||||| ||||||||| |||||||||||||||    
T  12317279 aaatcaaacccgagacctcaagaggagcaaactccaagattccaagccaaccactaggccaaccccaaatgg 12317350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 23270675 - 23270722
Alignment:
Q  41 gagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||    
T  23270675 gagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 23270722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 21042666 - 21042724
Alignment:
Q  29 agaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    ||||||| |||||||||||||||||||||||||  ||| |||||| |||||||||||||    
T  21042666 agaccttgaaaggagcaaactccaagatcccaaaccaatcactaaaccaaccccaaatg 21042724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 7085777 - 7085826
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||||    
T  7085777 aggagaaaactccaagatcccaagccaaccactaagccagccccaaatgg 7085826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 11926653 - 11926702
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  11926653 aggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgg 11926702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 13038605 - 13038654
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  13038605 aggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgg 13038654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 15641256 - 15641305
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| || ||||||||||||    
T  15641256 aggagcaaactccaagatcccaagccaaccactaggctaaccccaaatgg 15641305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 31288097 - 31288146
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  31288097 aggagcaaactccaagatcccaagccaaccactaggccaacccaaaatgg 31288146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 38684254 - 38684209
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaa 84  Q
    |||||||||||||||||||||||||||||||||  |||||||||||    
T  38684254 aggagcaaactccaagatcccaagtcaaccactgggccaaccccaa 38684209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 25343312 - 25343236
Alignment:
Q  12 agagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||||||| | ||||||| ||| ||||| | ||||||||  |||||||||||||| |||||||||||||||    
T  25343312 agaggaaatcaaacttgagaccttgaaaagagcacaatccaagatttcaagtcaaccactaggccaaccccaaatgg 25343236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 37397780 - 37397712
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||||||||| |||||||   ||||||||||||||||||| |||| |||||||||  ||||||||||||    
T  37397780 aatcaaaccttagacctttggaggagcaaactccaagatcacaagccaaccactagaccaaccccaaat 37397712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 3715060 - 3715107
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||    
T  3715060 aggagcaaactccaagatcccaaaccaaccactaggccaaccccaaat 3715107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 27487708 - 27487755
Alignment:
Q  41 gagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||| ||||||| |||||||||| |||||||||||||||    
T  27487708 gagcaaactccaaaatcccaaatcaaccactaggccaaccccaaatgg 27487755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 40330689 - 40330630
Alignment:
Q  29 agaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||| | ||||||||||||||||||| ||||  |||||||||||||||| |||||||    
T  40330689 agaccttgagaggagcaaactccaagatctcaagctaaccactaagccaacctcaaatgg 40330630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 8780551 - 8780473
Alignment:
Q  12 agagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatggtt 90  Q
    ||||| |||| ||||| ||||||| | ||||||| |||||||||||| | ||||||||||| | ||||| |||||||||    
T  8780551 agagacaatcgaacctgagaccttgagaggagcacactccaagatccgatgtcaaccactaggtcaacctcaaatggtt 8780473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 15931102 - 15931056
Alignment:
Q  42 agcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||    
T  15931102 agcaaactccaagatcccaagctaaccactaggccaaccccaaatgg 15931056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 27498861 - 27498931
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| ||||||  | |||||||||||||||||| ||||| ||||||||| | |||||||||||||    
T  27498861 aatcgaacctgagacctctagaggagcaaactccaagattccaagccaaccactaggtcaaccccaaatgg 27498931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 30485875 - 30485825
Alignment:
Q  38 aaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||||||||||    
T  30485875 aaggagcaaactccaagatcccaagccaaccgctgggccaaccccaaatgg 30485825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 33709652 - 33709694
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccc 81  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  33709652 aggagcaaactccaagatcccaagccaaccactaggccaaccc 33709694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 39459392 - 39459322
Alignment:
Q  14 agaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaa 84  Q
    |||||||| ||||| ||||||| |||| |||| | |||||||||| |||||||| |||| |||||||||||    
T  39459392 agaaaatcgaacctgagacctttaaagaagcacattccaagatcctaagtcaactactatgccaaccccaa 39459322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 1827681 - 1827730
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||| |||| ||||||||| | |||||||||||||    
T  1827681 aggagcaaactccaagatctcaagccaaccactaggtcaaccccaaatgg 1827730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 5067347 - 5067298
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||| |||||||||||||||||||||  ||||| ||||||||    
T  5067347 aggagcaaactcgaagatcccaagtcaaccactagaccaactccaaatgg 5067298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 10399847 - 10399770
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||| |||||||||| | | |||  ||| ||||||||||||||||| |||||||||||||  ||||| ||||||||    
T  10399847 cagagagaatcaaacctgaaatctttgaagaagcaaactccaagatccaaagtcaaccactagaccaacaccaaatgg 10399770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 10869695 - 10869760
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaacccca 83  Q
    |||| ||||| |||||||   ||||||||||||||||||| |||||||||||| | ||||||||||    
T  10869695 aatcgaacctgagacctttggaggagcaaactccaagatcgcaagtcaaccaccatgccaacccca 10869760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 16616165 - 16616116
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| |||| |||||||||| | |||||||    
T  16616165 aggagcaaactccaagatcccaagccaactactaagccaatctcaaatgg 16616116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 34049868 - 34049819
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| |||| ||||  ||||||||||||||    
T  34049868 aggagcaaactccaagatcccaagccaactactagcccaaccccaaatgg 34049819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 34310188 - 34310139
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||| ||||| | ||||||| |||||||||||||||    
T  34310188 aggagcaaactccaagattccaagccgaccactaggccaaccccaaatgg 34310139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 42193528 - 42193491
Alignment:
Q  42 agcaaactccaagatcccaagtcaaccactaagccaac 79  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  42193528 agcaaactccaagatcccaagtcaaccactaggccaac 42193491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 18172851 - 18172787
Alignment:
Q  24 acctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| |||| || ||| ||||||||||||||||||||||||||| ||||| | ||| ||||||||    
T  18172851 acctgagacattgaaaagagcaaactccaagatcccaagtcaactactaaactaactccaaatgg 18172787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 42006837 - 42006791
Alignment:
Q  41 gagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    ||||||||||||||||| |||| |||||||||  |||||||||||||    
T  42006837 gagcaaactccaagatctcaagccaaccactagcccaaccccaaatg 42006791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 22253296 - 22253345
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||| || ||||||||||| |||||||||  ||||||||||||||    
T  22253296 aggagcaaagtcaaagatcccaagccaaccactagaccaaccccaaatgg 22253345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 33025526 - 33025477
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||| |||||||||||||||| ||||| | | |||||||||||||||    
T  33025526 aggagcacactccaagatcccaagccaaccgcgaggccaaccccaaatgg 33025477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 204177 - 204221
Alignment:
Q  41 gagcaaactccaagatcccaagtcaaccactaagccaaccccaaa 85  Q
    ||||||||||||||||| ||||||||||||||  ||||| |||||    
T  204177 gagcaaactccaagatcacaagtcaaccactagaccaactccaaa 204221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 21236486 - 21236562
Alignment:
Q  12 agagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||| |||| |||| |||||||   |||||| |||||||||||||| |||  ||| ||||||||||||| ||||||    
T  21236486 agagagaatcgaaccgaagacctctgaaggagaaaactccaagatcctaagcgaactactaagccaaccctaaatgg 21236562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 40058975 - 40059052
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||| |||| ||||| ||||||  | |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  40058975 cagagagaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 40059052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 34722216 - 34722169
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  34722216 aggagcaaactccaagatcccaagccaaccactaagccaaccccaaat 34722169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 13873425 - 13873495
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||  |||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  13873425 aatcgaacctgagacctttgaaggagcaaactccaagatcccaagcaaaccactaggccaaccccaaatgg 13873495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 25852281 - 25852211
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||   |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  25852281 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 25852211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 42245802 - 42245744
Alignment:
Q  29 agaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    ||||||| | |||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  42245802 agacctttagaggagcaaactctaagatcccaagtcaaccactaggccaaccccaaatg 42245744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 19660655 - 19660732
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||| |||||||||| ||||||    |||||||||||||||||||||||| ||||||||| |||||| ||||||||    
T  19660655 cagagagaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaactccaaatgg 19660732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 20566395 - 20566346
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  20566395 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 20566346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 27528946 - 27528995
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  27528946 aggagcaaactccaagatcccaagccaaccactaagccaaccccagatgg 27528995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 32986243 - 32986194
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  32986243 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 32986194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 41621719 - 41621796
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||| ||||||||| | ||||||| | ||||||||||||||||||| |||| |||||| || |||||||||||||||    
T  41621719 cagaggaaatcaaacatgagaccttgagaggagcaaactccaagatctcaagccaaccattaggccaaccccaaatgg 41621796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 46714438 - 46714389
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  46714438 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 46714389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 54127493 - 54127542
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  54127493 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 54127542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 51535659 - 51535611
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||    
T  51535659 aggagcaaactccaagatcccaagtcaaccactaggccaaccctaaatg 51535611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 5609355 - 5609402
Alignment:
Q  41 gagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||    
T  5609355 gagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 5609402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 1985882 - 1985833
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| ||||| |||||||||    
T  1985882 aggagcaaactccaagatcccaagccaaccactaggccaatcccaaatgg 1985833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 33696430 - 33696479
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  33696430 aggagcaaactccaagatcccaagccaaccactaggccaaccctaaatgg 33696479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 52983665 - 52983616
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||| |||| ||||||||| |||||||||||||||    
T  52983665 aggagcaaactccaagatctcaagccaaccactaggccaaccccaaatgg 52983616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 7093450 - 7093390
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccact 71  Q
    |||||| |||| ||||||| ||||| ||||||||| |||||||||||||||| ||||||||    
T  7093450 cagagagaatcgaacctaaaaccttgaaaggagcacactccaagatcccaagccaaccact 7093390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 35674894 - 35674941
Alignment:
Q  41 gagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||||    
T  35674894 gagcaaactccaagatcccaagccaaccacttggccaaccccaaatgg 35674941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 34835585 - 34835527
Alignment:
Q  29 agaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    ||||||| | |||||||||||| ||||||||||| |||||||||  |||||||||||||    
T  34835585 agaccttaagaggagcaaactctaagatcccaagccaaccactagaccaaccccaaatg 34835527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 35229214 - 35229172
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccc 81  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  35229214 aggagcaaactccaagatcccaagccaaccactaggccaaccc 35229172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 55961893 - 55961939
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaa 85  Q
    |||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  55961893 aggagcaaactccaagatcccaagccaaccactaggccaatcccaaa 55961939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 13550254 - 13550205
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||| ||||| |||||||||||||| ||||||| |||||||    
T  13550254 aggagcaaactcccagatctcaagtcaaccactaggccaaccgcaaatgg 13550205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 22625221 - 22625270
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||| |||||||||||||||||| ||||||||| ||||||| |||||||    
T  22625221 aggagtaaactccaagatcccaagccaaccactaggccaacctcaaatgg 22625270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 33992700 - 33992623
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||| |||| ||||||||||||    |||||||||||||||||||||||  ||||||||| | |||||| ||||||    
T  33992700 cagagagaatcgaacctaagacctctggaggagcaaactccaagatcccaaaccaaccactaggtcaaccctaaatgg 33992623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 34844909 - 34844958
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||| ||||  |||||||| |||||||||||||||    
T  34844909 aggagcaaactccaagatctcaagcaaaccactaggccaaccccaaatgg 34844958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 10125823 - 10125783
Alignment:
Q  44 caaactccaagatcccaagtcaaccactaagccaaccccaa 84  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  10125823 caaactccaagatcccaagtcaaccactaggccaactccaa 10125783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 41085100 - 41085024
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||| |||| ||| | ||||||| ||||||| | ||||||||||| ||||||||||||||   ||||||||||||    
T  41085100 cagagagaatcgaacattagaccttgaaaggaggacactccaagatctcaagtcaaccactagatcaaccccaaatg 41085024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 4911965 - 4911926
Alignment:
Q  42 agcaaactccaagatcccaagtcaaccactaagccaaccc 81  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  4911965 agcaaactccaagatcttaagtcaaccactaagccaaccc 4911926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 9646339 - 9646414
Alignment:
Q  11 cagagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||||| |||||||| | ||||||| | ||||||| |||| ||||||||||  |||||||||  ||||||||||||    
T  9646339 cagagagaatcaaacatgagaccttgacaggagcacactcaaagatcccaaaccaaccactagaccaaccccaaat 9646414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 12500188 - 12500231
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaa 61  Q
    |||||||||| |||||||  ||||||||||||||||||||||||    
T  12500188 aatcaaacctgagacctttgaaggagcaaactccaagatcccaa 12500231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 19220606 - 19220530
Alignment:
Q  12 agagaaaatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| ||||| | ||||| | ||||||| |||||||||||  ||||||||||| | ||||||| |||||||    
T  19220606 agaggaaatcgaacctgaaaccttgagaggagcacactccaagatcttaagtcaaccaccatgccaacctcaaatgg 19220530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 25969644 - 25969700
Alignment:
Q  30 gaccttcaaaggagcaaactccaagat-cccaagtcaaccactaagccaaccccaaa 85  Q
    |||||| | |||||||||||||||||| ||||| ||||||| || ||||||||||||    
T  25969644 gaccttgagaggagcaaactccaagatccccaaatcaaccagtaggccaaccccaaa 25969700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 43719216 - 43719264
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    ||||||||||||||||||| |||  |||||||||  |||||||||||||    
T  43719216 aggagcaaactccaagatctcaaaccaaccactagaccaaccccaaatg 43719264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 45787855 - 45787902
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    ||||||||| |||||||| ||||| ||||||||| ||||||||||||||    
T  45787855 aggagcaaa-tccaagattccaagccaaccactaggccaaccccaaatg 45787902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 5212 - 5282
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||   |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  5212 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 5282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 8558 - 8607
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  8558 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 8607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 1207 - 1255
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  1207 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 1255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 10844 - 10892
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  10844 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 10892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 9450 - 9498
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  9450 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 9498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 12151 - 12199
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatg 87  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  12151 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 12199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 40372 - 40322
Alignment:
Q  38 aaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||||| ||| ||||||||| |||||||||||||||    
T  40372 aaggagcaaactccaagatcctaagccaaccactaggccaaccccaaatgg 40322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 97496 - 97566
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||| ||||| |||||||   ||||||||||| |||||||||||| ||||||||| |||||||||||||||    
T  97496 aatcgaacctgagacctttggaggagcaaactacaagatcccaagccaaccactaggccaaccccaaatgg 97566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 8330 - 8379
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||||||| || |||||||||| ||||||||||||||    
T  8330 aggagcaaactccaagatcccgagccaaccactaaaccaaccccaaatgg 8379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 15037 - 14988
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||||||    
T  15037 aggagcaaactccaagatcccaggccaaccactaggccaaccccaaatgg 14988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 53022 - 53071
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| ||||||||| ||||| |||||||||    
T  53022 aggagcaaactccaagatcccaagccaaccactaggccaatcccaaatgg 53071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 12905 - 12952
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||||||    
T  12905 aggagcgaactccaagatcccaagtcaaccactaggccaatcccaaat 12952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 7460 - 7507
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||||||||||||||||||||||| |||| |||| |||||||||||||    
T  7460 aggagcaaactccaagatcccaagccaactactaggccaaccccaaat 7507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 61868 - 61819
Alignment:
Q  199 tacatgatcattaaaattgggcaagaccaatgtatttctttccatattga 248  Q
    |||||||| ||||||||||||||||| |||||||||||||| || |||||    
T  61868 tacatgataattaaaattgggcaagagcaatgtatttctttacacattga 61819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 66808 - 66759
Alignment:
Q  39 aggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    |||||||||||||||||||||||| |||||||||  |||| |||||||||    
T  66808 aggagcaaactccaagatcccaagccaaccactagaccaatcccaaatgg 66759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 20289 - 20246
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaa 61  Q
    |||||||||| |||||||  ||||||||||||||||||||||||    
T  20289 aatcaaacctgagacctttgaaggagcaaactccaagatcccaa 20246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 27832 - 27773
Alignment:
Q  29 agaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||| | ||||||||||||||| |||||||  |||||||||  ||||||||||||||    
T  27832 agaccttgagaggagcaaactccaaaatcccaaaccaaccactagaccaaccccaaatgg 27773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 26697 - 26743
Alignment:
Q  42 agcaaactccaagatcccaagtcaaccactaagccaaccccaaatgg 88  Q
    ||||||||||||||||| ||| |||||| || |||||||||||||||    
T  26697 agcaaactccaagatcctaagccaaccagtaggccaaccccaaatgg 26743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 29272 - 29340
Alignment:
Q  18 aatcaaacctaagaccttcaaaggagcaaactccaagatcccaagtcaaccactaagccaaccccaaat 86  Q
    |||| ||||||||||||| | |||| || ||| |||||| ||||| ||||||||| ||||| |||||||    
T  29272 aatcgaacctaagaccttgagaggaacacacttcaagattccaagccaaccactaggccaatcccaaat 29340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University