View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13040_high_63 (Length: 281)
Name: NF13040_high_63
Description: NF13040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13040_high_63 |
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Alignment Details
Target: chr6 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 11 - 264
Target Start/End: Original strand, 32317423 - 32317676
Alignment:
| Q |
11 |
cacagaaataacagcagcaggtgaattaaaagtgaccgatatcagtttttacctagtaagtggccatttgaaaagaaaaaacgtcatttttatttgtcct |
110 |
Q |
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| T |
32317423 |
cacaaaaataacagcagcaggtgaattaaaagtgactgatatcagtttttacctagtaagtggccatttgaaaagaaaaaacgtcatttttatttgtcct |
32317522 |
T |
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| Q |
111 |
ttgaaattggaggaggttgagcaatttgatccttcaaacttgcaaaaacacaaattaatctttaaaattaaagattgtcaatcaatttcatctctctgtc |
210 |
Q |
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| T |
32317523 |
ttgaaattggaggaggttgagcaatttgatccttcaaacttgcaaaaacacaaattaatctttaaaattaaagattgtcaatcaatttcatctctctgtc |
32317622 |
T |
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| Q |
211 |
atcttataagattaaaatgttgatttgacatattgtttataatttacttggagt |
264 |
Q |
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| T |
32317623 |
atcttataagattaaaatgttgagttgacatattgtttataagttacttggagt |
32317676 |
T |
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