View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13040_low_4 (Length: 871)

Name: NF13040_low_4
Description: NF13040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13040_low_4
NF13040_low_4
[»] chr6 (28 HSPs)
chr6 (376-871)||(180030-180518)
chr6 (377-541)||(34837121-34837285)
chr6 (376-562)||(7926797-7926983)
chr6 (385-605)||(606596-606816)
chr6 (385-553)||(1856752-1856919)
chr6 (414-517)||(6657915-6658018)
chr6 (385-604)||(19780181-19780400)
chr6 (376-455)||(12143689-12143768)
chr6 (254-348)||(180546-180646)
chr6 (402-543)||(9425503-9425644)
chr6 (482-557)||(12144075-12144151)
chr6 (626-750)||(26669636-26669760)
chr6 (433-543)||(6454403-6454512)
chr6 (83-197)||(14459129-14459243)
chr6 (414-560)||(12453713-12453862)
chr6 (626-733)||(25064663-25064770)
chr6 (658-737)||(20716384-20716461)
chr6 (399-459)||(31116416-31116476)
chr6 (385-488)||(2950133-2950234)
chr6 (254-332)||(4746088-4746169)
chr6 (385-488)||(5428768-5428871)
chr6 (448-537)||(27903211-27903301)
chr6 (92-173)||(20794130-20794211)
chr6 (505-553)||(7633386-7633434)
chr6 (399-459)||(31117341-31117401)
chr6 (626-733)||(6455447-6455554)
chr6 (385-459)||(2443882-2443956)
chr6 (645-694)||(20858416-20858465)
[»] chr7 (44 HSPs)
chr7 (376-586)||(41508068-41508278)
chr7 (385-558)||(7307436-7307610)
chr7 (376-602)||(12506660-12506886)
chr7 (376-600)||(12485230-12485454)
chr7 (385-560)||(20949067-20949241)
chr7 (420-549)||(46341502-46341631)
chr7 (381-553)||(37048576-37048753)
chr7 (448-560)||(46101254-46101366)
chr7 (376-560)||(14568351-14568535)
chr7 (461-605)||(42935403-42935547)
chr7 (447-554)||(2195805-2195914)
chr7 (376-458)||(45072488-45072570)
chr7 (402-543)||(6549065-6549206)
chr7 (414-557)||(10599758-10599901)
chr7 (377-526)||(34470086-34470235)
chr7 (414-554)||(14650110-14650247)
chr7 (399-487)||(14658767-14658855)
chr7 (470-585)||(943102-943217)
chr7 (656-750)||(24579263-24579357)
chr7 (527-585)||(6549222-6549280)
chr7 (652-738)||(10020458-10020544)
chr7 (699-748)||(32534572-32534621)
chr7 (98-171)||(39844725-39844798)
chr7 (254-321)||(24282038-24282108)
chr7 (466-553)||(508464-508550)
chr7 (402-485)||(2122418-2122501)
chr7 (624-730)||(37917384-37917490)
chr7 (652-738)||(44409221-44409306)
chr7 (495-587)||(43051415-43051504)
chr7 (647-735)||(7162660-7162748)
chr7 (626-750)||(7392283-7392407)
chr7 (396-516)||(15033294-15033413)
chr7 (414-522)||(18145807-18145915)
chr7 (92-200)||(22196758-22196866)
chr7 (92-200)||(22240955-22241063)
chr7 (634-738)||(32814829-32814933)
chr7 (634-721)||(1513489-1513576)
chr7 (699-738)||(2567821-2567860)
chr7 (626-733)||(35195837-35195944)
chr7 (270-331)||(1574719-1574780)
chr7 (626-710)||(14818382-14818467)
chr7 (626-710)||(15265380-15265465)
chr7 (624-677)||(32514686-32514739)
chr7 (464-509)||(35333328-35333373)
[»] chr8 (38 HSPs)
chr8 (377-595)||(31658811-31659029)
chr8 (376-586)||(8251204-8251414)
chr8 (380-560)||(2207766-2207944)
chr8 (414-592)||(36054778-36054956)
chr8 (389-586)||(16890251-16890451)
chr8 (385-565)||(2152312-2152490)
chr8 (376-552)||(2520103-2520277)
chr8 (385-558)||(1445349-1445522)
chr8 (402-600)||(38209515-38209711)
chr8 (402-585)||(36408181-36408364)
chr8 (455-554)||(40694232-40694331)
chr8 (463-560)||(11778032-11778129)
chr8 (466-559)||(30112485-30112578)
chr8 (388-495)||(40314274-40314381)
chr8 (461-554)||(40696612-40696704)
chr8 (398-480)||(30653623-30653705)
chr8 (645-750)||(11900579-11900683)
chr8 (408-585)||(30870743-30870919)
chr8 (430-550)||(43836938-43837058)
chr8 (624-734)||(7345420-7345530)
chr8 (629-738)||(220351-220460)
chr8 (629-738)||(689506-689615)
chr8 (629-738)||(733974-734083)
chr8 (629-738)||(857870-857979)
chr8 (419-556)||(29916963-29917099)
chr8 (506-587)||(35431553-35431633)
chr8 (419-487)||(27518532-27518600)
chr8 (504-556)||(30654260-30654312)
chr8 (256-331)||(18111937-18112012)
chr8 (509-560)||(21504884-21504935)
chr8 (699-750)||(35779820-35779871)
chr8 (498-553)||(36204128-36204183)
chr8 (270-331)||(13568880-13568942)
chr8 (635-681)||(16611588-16611634)
chr8 (376-438)||(43594385-43594446)
chr8 (626-690)||(10292345-10292410)
chr8 (498-559)||(11388093-11388154)
chr8 (645-738)||(22847251-22847344)
[»] chr2 (44 HSPs)
chr2 (385-606)||(38496421-38496642)
chr2 (387-605)||(3269306-3269524)
chr2 (387-605)||(3269865-3270083)
chr2 (387-585)||(3268767-3268965)
chr2 (385-560)||(40503869-40504044)
chr2 (376-605)||(38214061-38214291)
chr2 (385-604)||(40442668-40442887)
chr2 (376-604)||(39063564-39063793)
chr2 (385-604)||(4015767-4015987)
chr2 (399-605)||(19285829-19286035)
chr2 (385-560)||(16781256-16781430)
chr2 (376-595)||(40664191-40664413)
chr2 (396-517)||(32872378-32872499)
chr2 (402-605)||(7011043-7011243)
chr2 (402-517)||(31404982-31405097)
chr2 (402-556)||(14200363-14200516)
chr2 (401-583)||(31365036-31365218)
chr2 (399-476)||(21794914-21794992)
chr2 (626-738)||(34107268-34107380)
chr2 (626-740)||(22355077-22355191)
chr2 (480-560)||(3711912-3711991)
chr2 (461-517)||(34262746-34262802)
chr2 (461-560)||(35310800-35310899)
chr2 (652-723)||(40471173-40471244)
chr2 (402-516)||(45723913-45724028)
chr2 (470-543)||(16268375-16268448)
chr2 (256-331)||(9701070-9701145)
chr2 (385-445)||(2761620-2761682)
chr2 (503-605)||(21794804-21794907)
chr2 (463-509)||(17368928-17368974)
chr2 (376-426)||(21229611-21229661)
chr2 (645-738)||(39334870-39334963)
chr2 (256-331)||(7116261-7116336)
chr2 (462-559)||(21229486-21229584)
chr2 (451-535)||(28650239-28650323)
chr2 (396-456)||(34309310-34309370)
chr2 (256-331)||(12890170-12890245)
chr2 (510-605)||(23959979-23960074)
chr2 (510-553)||(44883267-44883310)
chr2 (699-737)||(29896151-29896189)
chr2 (655-733)||(37123209-37123287)
chr2 (272-332)||(2060315-2060376)
chr2 (498-560)||(2761535-2761599)
chr2 (254-323)||(7016090-7016158)
[»] scaffold0024 (1 HSPs)
scaffold0024 (376-604)||(154290-154518)
[»] chr4 (39 HSPs)
chr4 (376-537)||(31707322-31707480)
chr4 (385-583)||(18838723-18838921)
chr4 (423-609)||(34319497-34319682)
chr4 (396-608)||(25376834-25377044)
chr4 (404-582)||(42312399-42312585)
chr4 (398-559)||(33721603-33721768)
chr4 (385-553)||(47231552-47231718)
chr4 (396-544)||(30615129-30615274)
chr4 (396-585)||(27032109-27032295)
chr4 (466-573)||(44884411-44884519)
chr4 (396-555)||(16572251-16572407)
chr4 (254-332)||(15496130-15496208)
chr4 (254-331)||(17781384-17781462)
chr4 (377-468)||(32599730-32599820)
chr4 (626-750)||(49743356-49743480)
chr4 (542-609)||(42183299-42183366)
chr4 (467-557)||(4960253-4960343)
chr4 (461-602)||(54863874-54864017)
chr4 (254-331)||(52575621-52575696)
chr4 (463-549)||(56093596-56093682)
chr4 (256-331)||(18872717-18872792)
chr4 (254-331)||(19839911-19839990)
chr4 (377-457)||(44720553-44720633)
chr4 (626-738)||(49039434-49039546)
chr4 (291-334)||(24177417-24177460)
chr4 (414-509)||(25382395-25382490)
chr4 (254-331)||(17261344-17261422)
chr4 (254-331)||(24178019-24178095)
chr4 (629-738)||(27921893-27922002)
chr4 (626-738)||(21023341-21023452)
chr4 (461-553)||(21128097-21128189)
chr4 (652-732)||(36045850-36045930)
chr4 (626-678)||(41492547-41492599)
chr4 (261-331)||(7698435-7698506)
chr4 (628-690)||(9062172-9062234)
chr4 (385-459)||(27184255-27184329)
chr4 (414-479)||(42183535-42183601)
chr4 (493-530)||(40414163-40414200)
chr4 (645-722)||(42432021-42432098)
[»] chr3 (54 HSPs)
chr3 (451-605)||(32211834-32211988)
chr3 (376-605)||(45261313-45261539)
chr3 (376-605)||(40344902-40345129)
chr3 (385-605)||(17003556-17003775)
chr3 (386-592)||(46918443-46918648)
chr3 (397-606)||(35455256-35455461)
chr3 (396-585)||(30041296-30041484)
chr3 (398-585)||(43320129-43320310)
chr3 (376-557)||(28695539-28695724)
chr3 (399-585)||(8825352-8825535)
chr3 (254-332)||(48921668-48921746)
chr3 (492-602)||(27721330-27721439)
chr3 (377-530)||(36659210-36659361)
chr3 (506-586)||(18085649-18085729)
chr3 (436-552)||(25295082-25295198)
chr3 (254-331)||(16869537-16869615)
chr3 (464-549)||(49983561-49983646)
chr3 (645-733)||(34407084-34407172)
chr3 (402-586)||(52596622-52596808)
chr3 (377-560)||(55452423-55452607)
chr3 (254-331)||(1330967-1331043)
chr3 (527-586)||(2564419-2564478)
chr3 (463-553)||(25286165-25286256)
chr3 (461-560)||(41559981-41560080)
chr3 (414-480)||(49983782-49983848)
chr3 (478-539)||(21698510-21698571)
chr3 (396-517)||(30577825-30577946)
chr3 (385-476)||(22923709-22923800)
chr3 (402-493)||(43105143-43105234)
chr3 (397-455)||(42279227-42279285)
chr3 (397-553)||(50452285-50452438)
chr3 (403-560)||(48271745-48271901)
chr3 (652-736)||(4045625-4045709)
chr3 (254-331)||(10284611-10284691)
chr3 (262-332)||(42044220-42044290)
chr3 (385-438)||(47860703-47860756)
chr3 (463-528)||(49787770-49787835)
chr3 (256-332)||(15996735-15996811)
chr3 (414-557)||(24650120-24650261)
chr3 (376-452)||(25294828-25294904)
chr3 (256-331)||(30819878-30819953)
chr3 (291-331)||(38670789-38670829)
chr3 (256-331)||(48904225-48904300)
chr3 (254-331)||(12918798-12918875)
chr3 (254-331)||(15095198-15095275)
chr3 (254-288)||(29383057-29383091)
chr3 (254-288)||(35938408-35938442)
chr3 (483-553)||(43105935-43106004)
chr3 (451-553)||(47860601-47860703)
chr3 (685-750)||(6054202-6054267)
chr3 (626-679)||(12236593-12236646)
chr3 (256-332)||(16776849-16776925)
chr3 (617-678)||(16874239-16874300)
chr3 (656-737)||(28951890-28951971)
[»] chr5 (33 HSPs)
chr5 (387-586)||(18704967-18705166)
chr5 (376-586)||(6688755-6688967)
chr5 (387-607)||(3629190-3629410)
chr5 (398-585)||(11691051-11691236)
chr5 (378-548)||(2225586-2225756)
chr5 (397-530)||(11983573-11983705)
chr5 (447-551)||(3257250-3257354)
chr5 (423-551)||(10705027-10705154)
chr5 (376-561)||(27193004-27193187)
chr5 (402-553)||(4449438-4449589)
chr5 (414-586)||(7735722-7735894)
chr5 (376-530)||(29948037-29948192)
chr5 (378-496)||(14417914-14418034)
chr5 (67-231)||(1160228-1160392)
chr5 (653-750)||(41539335-41539432)
chr5 (414-595)||(19296167-19296348)
chr5 (414-554)||(17693562-17693699)
chr5 (442-520)||(36482456-36482534)
chr5 (500-553)||(10656502-10656555)
chr5 (699-750)||(4429210-4429261)
chr5 (451-560)||(35931539-35931646)
chr5 (254-331)||(39971014-39971091)
chr5 (254-332)||(9977980-9978060)
chr5 (400-457)||(14917820-14917877)
chr5 (701-750)||(29561717-29561766)
chr5 (498-554)||(10561391-10561447)
chr5 (256-331)||(20142221-20142296)
chr5 (623-710)||(25660903-25660990)
chr5 (461-535)||(5712716-5712790)
chr5 (626-672)||(10106624-10106670)
chr5 (699-745)||(18101931-18101977)
chr5 (655-745)||(40384274-40384364)
chr5 (626-679)||(7147067-7147120)
[»] chr1 (51 HSPs)
chr1 (386-605)||(36437179-36437398)
chr1 (402-604)||(17971358-17971560)
chr1 (389-604)||(42454854-42455071)
chr1 (376-595)||(28165095-28165316)
chr1 (397-606)||(42745492-42745700)
chr1 (79-243)||(21971882-21972046)
chr1 (396-558)||(31152431-31152591)
chr1 (414-550)||(39150189-39150324)
chr1 (391-605)||(9851798-9852010)
chr1 (461-604)||(24547376-24547520)
chr1 (396-604)||(32715643-32715850)
chr1 (402-585)||(27442368-27442550)
chr1 (427-585)||(11435520-11435679)
chr1 (376-605)||(28469882-28470106)
chr1 (398-553)||(31181043-31181199)
chr1 (387-560)||(3574720-3574894)
chr1 (471-557)||(17988348-17988434)
chr1 (396-517)||(28723954-28724075)
chr1 (402-556)||(46443700-46443852)
chr1 (465-538)||(25130026-25130099)
chr1 (396-558)||(31003574-31003732)
chr1 (377-570)||(2619657-2619845)
chr1 (626-738)||(42908765-42908877)
chr1 (625-738)||(41677053-41677166)
chr1 (634-738)||(9769569-9769673)
chr1 (626-733)||(9768803-9768910)
chr1 (654-733)||(11238022-11238101)
chr1 (616-738)||(195028-195150)
chr1 (461-547)||(29657969-29658054)
chr1 (498-559)||(34702197-34702258)
chr1 (378-549)||(948123-948285)
chr1 (414-517)||(13603106-13603212)
chr1 (627-750)||(9410305-9410427)
chr1 (635-738)||(16182812-16182915)
chr1 (376-439)||(52336841-52336904)
chr1 (396-446)||(45691591-45691641)
chr1 (645-750)||(13941332-13941437)
chr1 (256-331)||(32153756-32153831)
chr1 (646-750)||(50898727-50898830)
chr1 (385-468)||(17988133-17988216)
chr1 (699-738)||(23750217-23750256)
chr1 (387-450)||(25130217-25130280)
chr1 (254-332)||(29437814-29437892)
chr1 (262-331)||(4280094-4280163)
chr1 (270-331)||(17483733-17483794)
chr1 (463-549)||(26976628-26976714)
chr1 (684-738)||(32609241-32609295)
chr1 (656-738)||(35424164-35424246)
chr1 (254-331)||(50225378-50225457)
chr1 (625-738)||(2643804-2643917)
chr1 (255-296)||(36674259-36674300)
[»] scaffold0836 (1 HSPs)
scaffold0836 (376-604)||(2971-3200)
[»] scaffold1809 (1 HSPs)
scaffold1809 (376-604)||(467-696)
[»] scaffold0088 (1 HSPs)
scaffold0088 (376-560)||(51267-51451)
[»] scaffold0015 (1 HSPs)
scaffold0015 (402-585)||(38829-39010)
[»] scaffold0119 (1 HSPs)
scaffold0119 (626-750)||(1033-1157)
[»] scaffold0026 (1 HSPs)
scaffold0026 (455-557)||(68798-68897)
[»] scaffold0006 (1 HSPs)
scaffold0006 (414-517)||(131763-131869)
[»] scaffold0002 (1 HSPs)
scaffold0002 (645-738)||(440412-440505)


Alignment Details
Target: chr6 (Bit Score: 358; Significance: 0; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 376 - 871
Target Start/End: Complemental strand, 180518 - 180030
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||    
T  180518 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatatacccttataaaaaattttgaagcgttaaatacatcgactaatattaaaaag 180419  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaa 575  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  180418 acaaacattaaataaggggtataaaagtcttttaagcaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaa 180319  T
Q  576 ttttcttatatttaggaccgaagggagtataatagagtaaataatcaatcgtccccgcgagcatagatgagttggaagggacatgcattattatatgcgg 675  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||| |     
T  180318 ttttcttatatttaggaccgaaaggagtataatagagtaaataatcaatcgtccccgcaagcatagctgaattggaagggacatgcattattatatgtga 180219  T
Q  676 gggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattctaaccaccaaactatttgatnnnnnnnnnnnntaatcaatatgt 775  Q
    |||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || |             ||||||||||||    
T  180218 gggtcgggattcgaattccaaacaccccacttattaatcttgaaaaagatgaattctaatcaccaaactacttaaaaaaaagagtaaataatcaatatgt 180119  T
Q  776 tcatggatgaaagaggatgaaaataagttccaaattctgtataaatttaaatatagaatcaaaagtcggaatattatactgtagtaagaatatgct 871  Q
    |||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  180118 tcatggatgaaagaggatgaaaattag-------ttctgtataaatttaaatatagaatcaaaagttggaatattatactgtagtaagaatatgct 180030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 377 - 541
Target Start/End: Original strand, 34837121 - 34837285
Alignment:
Q  377 caatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaaga 476  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||||||    
T  34837121 caatacactcattaattagtgtaactttttgaatatttttacaaatataccctcataaaaaattgtgaagcattcaatacatccattaatattaaaaaga 34837220  T
Q  477 caaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatatt 541  Q
    ||| |||||||||||||||| ||||||||||||||||||| ||||| ||||||| ||| ||||||    
T  34837221 caagcattaaataaggggtaaaaaagtcttttaaacaatagctacaccttaaaagttgcgatatt 34837285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 376 - 562
Target Start/End: Complemental strand, 7926983 - 7926797
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    ||||||||| ||||||||||| |||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||     |||||||||||||    
T  7926983 ccaatacacacattaattagtataactttttgaataagattacaaatataccctcataaaaaattgtgaagcattaaatacactctttaatattaaaaag 7926884  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaaca 562  Q
    ||||  ||||||||||||||||| |||| || |||| ||||| ||||  |||||| |||||||||||||||||||||| ||||||||    
T  7926883 acaactattaaataaggggtatataagttttctaaaaaataattacactttaaaagttgtgatattttcttataaatatgaccaaca 7926797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 385 - 605
Target Start/End: Original strand, 606596 - 606816
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacatt 484  Q
    |||||||||  ||||||||||| || || |||||||||||||||| ||| ||  || |||| ||||||||||||| |||||||||||||| |||  ||||    
T  606596 tcattaattgttgtaactttttaaacatttttacaaatatacccttatagaatgttgtgaaacattaaatacatccactaatattaaaaatacagtcatt 606695  T
Q  485 aaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttat 584  Q
    ||||||||| |  |||||| |||||| | |||| |||| ||||||| |||||| |||||||||||||||||||||| |||  ||||||||||||||||||    
T  606696 aaataagggattaaaaagtattttaagctataagtacaccttaaaagttgtgacattttcttataaataggaccaaaaaaaattttgaaaattttcttat 606795  T
Q  585 atttaggaccgaagggagtat 605  Q
    ||| ||||||  |||||||||    
T  606796 attaaggaccagagggagtat 606816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 385 - 553
Target Start/End: Complemental strand, 1856919 - 1856752
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacatt 484  Q
    |||||||||| ||||| ||||| ||||| ||||||||||||| |||||| |||||  | || |||||||||| || | |||||||||||||| ||| |||    
T  1856919 tcattaattaatgtaattttttaaatatttttacaaatatactctcatacaaaatg-taaaacattaaatacttccattaatattaaaaagagaaatatt 1856821  T
Q  485 aaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaata 553  Q
    |||| || | || ||||||||||||||||||||||    ||||||| |||||||||||| |||||||||    
T  1856820 aaatgagagatagaaaagtcttttaaacaataactgatacttaaaagttgtgatatttttttataaata 1856752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 414 - 517
Target Start/End: Complemental strand, 6658018 - 6657915
Alignment:
Q  414 tttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaaca 513  Q
    |||||||||||||||||||||||| || ||||| |||||||| | | |||||||||||||||||||||||||||| |||| || ||||||| ||||||||    
T  6658018 tttacaaatataccctcataaaaatttgtgaagtattaaatatacccactaatattaaaaagacaaacattaaatgagggttagaaaagtcatttaaaca 6657919  T
Q  514 ataa 517  Q
    ||||    
T  6657918 ataa 6657915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 385 - 604
Target Start/End: Complemental strand, 19780400 - 19780181
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacatt 484  Q
    |||||| ||| ||||| ||||| ||| | ||||||||||||||    || ||| || ||||| |||||||| | | |||||| || |||||| |||||||    
T  19780400 tcattagttattgtaatttttttaatgtttttacaaatataccgcattataaatttgtgaagtattaaatatacccactaattttgaaaagagaaacatt 19780301  T
Q  485 aaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttat 584  Q
    |||| |||| || |||||||||||||||||||| || ||||||||| |||  |  |||||||||| ||||||||||    ||||||||||||||||||||    
T  19780300 aaatgagggttagaaaagtcttttaaacaataaatatatcttaaaagttgaaactttttcttatatataggaccaaatttttttttgaaaattttcttat 19780201  T
Q  585 atttaggaccgaagggagta 604  Q
    || ||| | || ||||||||    
T  19780200 atatagaatcggagggagta 19780181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 376 - 455
Target Start/End: Original strand, 12143689 - 12143768
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaata 455  Q
    ||||| || |||||||||| ||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  12143689 ccaatgcaatcattaattaatgtaactttttgaatatttttacaaatacaccctcataaaaaattgtgaagcattaaata 12143768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 254 - 348
Target Start/End: Complemental strand, 180646 - 180546
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaatattttttctaaaagggtcct---atagtaaaggacggaggtag---tacctccggttcttaata 347  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |   ||| ||| ||||||||||||   |||||||||| |||||||    
T  180646 gaaaatatcaaaaagattttataaaaagagacaaatattttttctaaaagggtcttataataataagggacggaggtagtactacctccggtccttaata 180547  T
Q  348 t 348  Q
    |    
T  180546 t 180546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 402 - 543
Target Start/End: Complemental strand, 9425644 - 9425503
Alignment:
Q  402 tttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaa 501  Q
    ||||||||| | ||||||||||||| |||||||||   | ||||| |||||||| ||  |||| ||| ||||||| ||||||||||| |||  || ||||    
T  9425644 tttttgaatgtttttacaaatatactctcataaaattctgtgaagtattaaatatattcactattatgaaaaagataaacattaaatgaggattaaaaaa 9425545  T
Q  502 gtcttttaaacaataactacatcttaaaaattgtgatatttt 543  Q
    |||||||||||||||| || | || |||| ||||||| ||||    
T  9425544 gtcttttaaacaataaatatacctcaaaagttgtgatttttt 9425503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 482 - 557
Target Start/End: Original strand, 12144075 - 12144151
Alignment:
Q  482 attaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgata-ttttcttataaataggac 557  Q
    ||||||||| |||||||||||||||||||| ||||| |||| |||||||||||||| | |||| |||||||||||||    
T  12144075 attaaataaagggtataaaagtcttttaaataataattacaccttaaaaattgtgacattttttttataaataggac 12144151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 626 - 750
Target Start/End: Complemental strand, 26669760 - 26669636
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagat 725  Q
    ||||||| |||||||| | |||||| |||||||||||| ||||||||  |||| || | ||||||  ||| | |||||||||||| | |||||||||| |    
T  26669760 gtccccgtgagcatagctcagttggtagggacatgcataattatatgtaggggctggggttcgaaccccagacaccccacttattcaccttgaaaaaggt 26669661  T
Q  726 gaattctaaccaccaaactatttga 750  Q
    |||||||| |||| |||||| ||||    
T  26669660 gaattctagccactaaactacttga 26669636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 433 - 543
Target Start/End: Original strand, 6454403 - 6454512
Alignment:
Q  433 aaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaat 532  Q
    |||||||| ||||| ||||||   ||| | |||||||| ||| |||||||||||||||||| || |||||||||||||  ||||| ||||||| |||| |    
T  6454403 aaaaaattgtgaagtattaaacgtatccattaatattataaatacaaacattaaataaggg-taaaaaagtcttttaagtaataattacatctaaaaagt 6454501  T
Q  533 tgtgatatttt 543  Q
    |||||||||||    
T  6454502 tgtgatatttt 6454512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 14459243 - 14459129
Alignment:
Q  83 tccaagttgacacgcgtcggaattcgatctaaaagagtcttccaaacaaaagccatgacctttgaaggtgcccccgttttccaaatttgtcggaacaccc 182  Q
    |||||||||| ||| |||||||| | |||    |||| ||||||||||||||| || ||||| ||||||||||  | |||||||||||| ||||||||||    
T  14459243 tccaagttgagacgggtcggaatcctatcccggagagccttccaaacaaaagcaatcaccttggaaggtgccctggatttccaaatttggcggaacaccc 14459144  T
Q  183 tccgctccccttccg 197  Q
    ||| || ||||||||    
T  14459143 tcctcttcccttccg 14459129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 414 - 560
Target Start/End: Original strand, 12453713 - 12453862
Alignment:
Q  414 tttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataa---ggggtataaaagtcttttaa 510  Q
    ||||||||||||| || ||||||| ||||||| ||||||| ||||  | ||||||| |||||||||  ||||| |||   || || ||||| | ||||||    
T  12453713 tttacaaatatactctaataaaaagttatgaaacattaaacacattcattaatatttaaaagacaataattaattaaatgggagtttaaaaatattttaa 12453812  T
Q  511 acaataactacatcttaaaaattgtgatattttcttataaataggaccaa 560  Q
     ||| ||| ||| ||||||||| |||| ||||||||||||| | ||||||    
T  12453813 gcaaaaaccacaccttaaaaatggtgacattttcttataaaaatgaccaa 12453862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 626 - 733
Target Start/End: Complemental strand, 25064770 - 25064663
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagat 725  Q
    ||||||| |||||||| | |||||| | |||||||||||||||||||| ||||||| | ||||||  ||| | ||||||||| || ||| | ||||||||    
T  25064770 gtccccgtgagcatagttcagttggtatggacatgcattattatatgcaggggttggggttcgaaccccagacaccccacttcttcatcctaaaaaagat 25064671  T
Q  726 gaattcta 733  Q
     |||||||    
T  25064670 aaattcta 25064663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 658 - 737
Target Start/End: Complemental strand, 20716461 - 20716384
Alignment:
Q  658 atgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattctaacca 737  Q
    |||||||||||||||  ||||| | |||||||| |||| |||||||||||||| |||||  | |||||||||||||||||    
T  20716461 atgcattattatatgtaggggtcgggattcgaactccagataccccacttattcatctt--ataagatgaattctaacca 20716384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 399 - 459
Target Start/End: Complemental strand, 31116476 - 31116416
Alignment:
Q  399 aactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatc 459  Q
    ||||||||||||||||||||||||||||||| ||| | |||| |||| |||| ||||||||    
T  31116476 aactttttgaatatgtttacaaatatacccttatagagaattgtgaaacattcaatacatc 31116416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 385 - 488
Target Start/End: Original strand, 2950133 - 2950234
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacatt 484  Q
    |||||||||| ||||| ||||||||||| |||||||||||| ||| || ||||||| |||| |||| |||| | | |||||||| ||||| | |||||||    
T  2950133 tcattaattaatgtaattttttgaatatttttacaaatatatcctgat-aaaaattgtgaaacatt-aatatacccactaatatgaaaaatataaacatt 2950230  T
Q  485 aaat 488  Q
    ||||    
T  2950231 aaat 2950234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 4746088 - 4746169
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaatatttt---ttctaaaagggtcctatagtaaaggacggaggtagtac 332  Q
    |||||||||||||||||||||||||||| ||||| | ||||   |||||||||| | ||||| ||| ||||||||| |||||    
T  4746088 gaaaatatcaaaaggatcttataaaaagggacaatttttttttcttctaaaaggattctataataagggacggagggagtac 4746169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 385 - 488
Target Start/End: Complemental strand, 5428871 - 5428768
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacatt 484  Q
    |||||||||  ||||| ||||| ||||| ||||||||||||| ||  || ||| ||||||| |||| ||| |||  |||||||||||||||| || ||||    
T  5428871 tcattaattgttgtaattttttaaatatttttacaaatatactcttgtagaaagttatgaaacattgaatgcattcactaatattaaaaagataatcatt 5428772  T
Q  485 aaat 488  Q
    ||||    
T  5428771 aaat 5428768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 448 - 537
Target Start/End: Complemental strand, 27903301 - 27903211
Alignment:
Q  448 attaaatacat-cgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtga 537  Q
    ||||||||||| | ||||||||||||||  ||| ||| ||||||  |||| ||||||||||| |||||||| ||||  |||||||||||||    
T  27903301 attaaatacattccactaatattaaaaaagcaatcataaaataaaaggtagaaaagtcttttgaacaataattacaatttaaaaattgtga 27903211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 20794211 - 20794130
Alignment:
Q  92 acacgcgtcggaattcgatctaaaagagtcttccaaacaaaagccatgacctttgaaggtgcccccgttttccaaatttgtc 173  Q
    |||||||||||||| ||||| | |||||  ||||||||||| ||| | ||||| || |||||||| || |||||||||||||    
T  20794211 acacgcgtcggaatccgatcaagaagagctttccaaacaaaggccctcaccttggacggtgccccggtcttccaaatttgtc 20794130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 7633386 - 7633434
Alignment:
Q  505 ttttaaacaataactacatcttaaaaattgtgatattttcttataaata 553  Q
    |||||| |||||||||||||||||||||||||  ||||||||| |||||    
T  7633386 ttttaagcaataactacatcttaaaaattgtgtcattttcttacaaata 7633434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 399 - 459
Target Start/End: Complemental strand, 31117401 - 31117341
Alignment:
Q  399 aactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatc 459  Q
    ||||||||||||||||||||||||||||| | ||| | |||| |||| |||| ||||||||    
T  31117401 aactttttgaatatgtttacaaatatacctttatagagaattgtgaaacattcaatacatc 31117341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 733
Target Start/End: Original strand, 6455447 - 6455554
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagat 725  Q
    ||||||| || ||||| | |||||| |||||||| ||||||||||||   ||| || | |||||| |||  | |||| ||||||| | ||||||||||||    
T  6455447 gtccccgtgaacatagttcagttggtagggacatacattattatatgtatgggctggggttcgaactccggacaccctacttattcaccttgaaaaagat 6455546  T
Q  726 gaattcta 733  Q
    ||||||||    
T  6455547 gaattcta 6455554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 385 - 459
Target Start/End: Complemental strand, 2443956 - 2443882
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatc 459  Q
    |||||||||| |  |||||||||||||| |||| ||||| ||| |||| |||| || ||||| ||||||||||||    
T  2443956 tcattaattaatccaactttttgaatatctttaaaaataaaccatcattaaaatttgtgaagtattaaatacatc 2443882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 694
Target Start/End: Complemental strand, 20858465 - 20858416
Alignment:
Q  645 agttggaagggacatgcattattatatgcgggggttgtgattcgaattcc 694  Q
    |||||| ||||||||||||| |||||||| ||||||| | ||||||||||    
T  20858465 agttggcagggacatgcattgttatatgcaggggttggggttcgaattcc 20858416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 147; Significance: 5e-77; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 376 - 586
Target Start/End: Complemental strand, 41508278 - 41508068
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  41508278 ccaatacacttattaattagtgtaactttttgaatgtttttacaaatataccctcataaaaaattgtgaagcattaaatacacccactaatattaaaaag 41508179  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaa 575  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||  |||||||||    |||||||||||    
T  41508178 acaaacattaaataaggggtaaaaaagtcttttaagcaataactacaccttaaaaattgtgatattttcttatatttaggaccaaatttttttttgaaaa 41508079  T
Q  576 ttttcttatat 586  Q
    |||| ||||||    
T  41508078 ttttattatat 41508068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 385 - 558
Target Start/End: Complemental strand, 7307610 - 7307436
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacatt 484  Q
    ||||||||||| ||||| ||||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| |||||| ||    
T  7307610 tcattaattagggtaaccttttgcatatttttacaaatatactctcataaaaaattgtgaagcattaaatacatccactaatattaaaaaaacaaacctt 7307511  T
Q  485 aaataaggggtat-aaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggacc 558  Q
    |||||||||| || |||| |||||||||||||||||||   |||||| |||||| ||||||||||||||| ||||    
T  7307510 aaataaggggcataaaaaatcttttaaacaataactactctttaaaagttgtgacattttcttataaatatgacc 7307436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 376 - 602
Target Start/End: Complemental strand, 12506886 - 12506660
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    ||||| || ||||||||||||||||||||||| |||   |||||||||||||||||||||||||| |||| || ||||||||   ||| | ||||||||     
T  12506886 ccaatgcaatcattaattagtgtaactttttgcatactattacaaatataccctcataaaaaattgtgaaacaataaatacacttactgagattaaaaac 12506787  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaa 575  Q
    | | |||||||||||||| || ||||||||||| ||||||||||||| ||||||| |||| |||||||||||||  ||||||||  |   ||||||||||    
T  12506786 aaacacattaaataagggatagaaaagtcttttgaacaataactacaccttaaaagttgtaatattttcttatatttaggaccagaattatttttgaaaa 12506687  T
Q  576 ttttcttatatttaggaccgaagggag 602  Q
    ||||||||||| |||||||| ||||||    
T  12506686 ttttcttatatataggaccggagggag 12506660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 376 - 600
Target Start/End: Complemental strand, 12485454 - 12485230
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    ||||| || ||||||||||||||||||||||| |||   |||||||||||||||||||||||||| |||| || ||||||||   ||| | ||||||||     
T  12485454 ccaatgcaatcattaattagtgtaactttttgcatactattacaaatataccctcataaaaaattgtgaaacaataaatacacttactgagattaaaaac 12485355  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaa 575  Q
    | | |||||||||||||| || ||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||  ||||||||  |   ||||||||||    
T  12485354 aaacacattaaataagggatagaaaagtcttttgaacaataactacaccttaaaagttgtaatattttattatatttaggaccagaattatttttgaaaa 12485255  T
Q  576 ttttcttatatttaggaccgaaggg 600  Q
    ||||||||||| |||||||| ||||    
T  12485254 ttttcttatatataggaccggaggg 12485230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 385 - 560
Target Start/End: Complemental strand, 20949241 - 20949067
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacatt 484  Q
    ||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||| |||| |||||||||||   ||||||||| |||||| | |||||    
T  20949241 tcattgattaatgtaactttttaaatatttttacaaatataccctcataaaaaattgtgaaacattaaatacacatactaatattcaaaagagagacatt 20949142  T
Q  485 aaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaa 560  Q
    |||| |||| || |||| || ||||| ||||||||||| ||||||| || ||| |||||||||||||||| |||||    
T  20949141 aaat-agggataaaaaaatcatttaagcaataactacaccttaaaagttatgacattttcttataaatagaaccaa 20949067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 420 - 549
Target Start/End: Complemental strand, 46341631 - 46341502
Alignment:
Q  420 aatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataact 519  Q
    ||||||||||| |||||| || |||||||||||||||| | |||| ||| ||||| | ||||| |||||||| |||| | ||||||||||| ||||||||    
T  46341631 aatataccctcgtaaaaagttgtgaagcattaaatacacccactattatcaaaaacaaaaacaataaataagtggtagagaagtcttttaagcaataact 46341532  T
Q  520 acatcttaaaaattgtgatattttcttata 549  Q
    ||| ||||||| ||||||||||||||||||    
T  46341531 acaccttaaaagttgtgatattttcttata 46341502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 381 - 553
Target Start/End: Complemental strand, 37048753 - 37048576
Alignment:
Q  381 acactcattaattagtgtaactttttgaatatgtttacaaatatac---cctcataaaaaattatgaagcattaaata--catcgactaatattaaaaag 475  Q
    |||||| ||||||||||||| ||||||||| | | ||||||||||    ||||||||||| |  |||| |||||||||  |  | | || ||||||||||    
T  37048753 acactcgttaattagtgtaattttttgaatgtttatacaaatatatgtacctcataaaaattcgtgaaccattaaatatcccactaatagtattaaaaag 37048654  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaata 553  Q
    | ||||||||||||| ||||| |||||||||||||||||| ||||||  |||||| ||||||||||||||||||||||    
T  37048653 ataaacattaaataaagggtagaaaagtcttttaaacaatcactacactttaaaagttgtgatattttcttataaata 37048576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 448 - 560
Target Start/End: Original strand, 46101254 - 46101366
Alignment:
Q  448 attaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttctta 547  Q
    ||||| |||||| ||||||||||||| ||||| |||||||| ||||||| ||||||||||| |  |||||||||| ||||||| || ||| |||||||||    
T  46101254 attaagtacatccactaatattaaaatgacaatcattaaatgaggggtagaaaagtcttttgagtaataactacaacttaaaagttatgacattttctta 46101353  T
Q  548 taaataggaccaa 560  Q
    |||||| ||||||    
T  46101354 taaataagaccaa 46101366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 376 - 560
Target Start/End: Complemental strand, 14568535 - 14568351
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    |||| ||| |||||| ||| |||||  |||||||| | |||||||||||||| |  || ||| || ||||| ||| |||| | | |||||| || |||||    
T  14568535 ccaagacaatcattagttattgtaatattttgaatgtttttacaaatataccgtattataaatttttgaagtattcaatatacccactaattttgaaaag 14568436  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaa 560  Q
    | ||||||||||| |||| || |||||||||||||||||||| || ||||||||| |||  |  |||||||||| ||||||||||    
T  14568435 agaaacattaaatgagggttagaaaagtcttttaaacaataaatatatcttaaaagttgaaactttttcttatatataggaccaa 14568351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 461 - 605
Target Start/End: Complemental strand, 42935547 - 42935403
Alignment:
Q  461 actaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaa 560  Q
    ||||||| | ||||||| |||||||||| ||   || |||| ||||||||||||||| |  |||| |||| ||||||  ||||||||||||||| |||||    
T  42935547 actaatactgaaaagaccaacattaaatgagaattagaaaaatcttttaaacaataaatgtatctcaaaagttgtgactttttcttataaatagaaccaa 42935448  T
Q  561 caaattttttgaaaattttcttatatttaggaccgaagggagtat 605  Q
     |||  |||||||||||||||||||| || ||||| |||||||||    
T  42935447 aaaaaattttgaaaattttcttatatataagaccggagggagtat 42935403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 447 - 554
Target Start/End: Complemental strand, 2195914 - 2195805
Alignment:
Q  447 cattaaatacatcgactaatattaaaaagacaaa--cattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttc 544  Q
    ||||||||||||| | |||||||||||| | |||  |||||||| | | ||| ||||||||||||||||||||||||| ||||||| || ||||||||||    
T  2195914 cattaaatacatctattaatattaaaaaaaaaaatacattaaatgaagagtagaaaagtcttttaaacaataactacaccttaaaagttatgatattttc 2195815  T
Q  545 ttataaatag 554  Q
    ||||| ||||    
T  2195814 ttatatatag 2195805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 376 - 458
Target Start/End: Original strand, 45072488 - 45072570
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacat 458  Q
    |||||||||| |||||||||| ||| ||||||||||| |||| |||||||| ||||||||||| | |||||||||||||||||    
T  45072488 ccaatacactgattaattagtataattttttgaatatttttataaatatactctcataaaaaactgtgaagcattaaatacat 45072570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 402 - 543
Target Start/End: Original strand, 6549065 - 6549206
Alignment:
Q  402 tttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaa 501  Q
    ||||||||||| ||||| |||||||| | |||||||||| |||| ||||||||||||| ||||   ||||||||| || |||||| | | || || ||||    
T  6549065 tttttgaatatttttactaatataccttaataaaaaattgtgaaacattaaatacatccactatctttaaaaagaaaaccattaagtgaaggataaaaaa 6549164  T
Q  502 gtcttttaaacaataactacatcttaaaaattgtgatatttt 543  Q
     ||||||||  |||||||| | ||||||| ||||||||||||    
T  6549165 atcttttaagaaataactataccttaaaagttgtgatatttt 6549206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 414 - 557
Target Start/End: Original strand, 10599758 - 10599901
Alignment:
Q  414 tttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaaca 513  Q
    |||||||||||||||||||||||  || ||||| |||||||| |   |||| ||||||||||| ||||||||||| | || || |||||| ||| |||||    
T  10599758 tttacaaatataccctcataaaattttgtgaagtattaaatatacacactattattaaaaagataaacattaaatgaaggttagaaaagtttttcaaaca 10599857  T
Q  514 ataactacatcttaaaaattgtgatattttcttataaataggac 557  Q
    |||| |  | || |||| ||||||  ||||||||||||||||||    
T  10599858 ataaatgtacctcaaaagttgtgactttttcttataaataggac 10599901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 377 - 526
Target Start/End: Complemental strand, 34470235 - 34470086
Alignment:
Q  377 caatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaaga 476  Q
    ||||||| |||||||||| |  |||||||||||||| ||||||||||||  | | || |||||| ||||  ||||||||||   ||||||||||||||||    
T  34470235 caatacaatcattaattaattaaactttttgaatatttttacaaatataaacacttacaaaattgtgaaatattaaatacactcactaatattaaaaaga 34470136  T
Q  477 caaacattaaataaggggtataaaagtcttttaaacaataactacatctt 526  Q
     || |||||||  |||| || |||| ||||||||  ||||| ||||||||    
T  34470135 gaagcattaaacgagggataaaaaattcttttaagtaataagtacatctt 34470086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 414 - 554
Target Start/End: Original strand, 14650110 - 14650247
Alignment:
Q  414 tttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggt-ataaaagtcttttaaac 512  Q
    ||||||||||||||||| |||||  ||||||||     |||| ||| |||| |||||||| || ||||||| ||| |||  | | ||||||||||||  |    
T  14650110 tttacaaatataccctcgtaaaattttatgaag----taatatatccactagtattaaaatgataaacattgaatgaggactaaaaaaagtcttttatgc 14650205  T
Q  513 aataactacatcttaaaaattgtgatattttcttataaatag 554  Q
    ||||| ||||||||||||||||||| ||||||||||||||||    
T  14650206 aataaatacatcttaaaaattgtgacattttcttataaatag 14650247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 399 - 487
Target Start/End: Original strand, 14658767 - 14658855
Alignment:
Q  399 aactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaa 487  Q
    |||||||| ||| | ||||||||||||||||||||||||  ||||||| ||||||||  || |||| ||||||||||| ||||||||||    
T  14658767 aactttttaaatgtttttacaaatataccctcataaaaacatatgaagtattaaatatttccactagtattaaaaagataaacattaaa 14658855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 470 - 585
Target Start/End: Complemental strand, 943217 - 943102
Alignment:
Q  470 aaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttt 569  Q
    |||||||||| ||||||| || | ||| ||| ||||||| ||||||||||||| || ||||||||||  ||||||||||||||| ||||||     ||||    
T  943217 aaaaagacaaccattaaaaaaagtgtagaaatgtcttttgaacaataactacacctaaaaaattgtggcattttcttataaatatgaccaaatttatttt 943118  T
Q  570 tgaaaattttcttata 585  Q
    ||||| ||||||||||    
T  943117 tgaaagttttcttata 943102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 656 - 750
Target Start/End: Complemental strand, 24579357 - 24579263
Alignment:
Q  656 acatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattctaaccaccaaactatttga 750  Q
    |||||||||||||||||| |||| || ||||||||  ||| | |||||||||||| | |||||||||| ||||||||| |||| |||||| ||||    
T  24579357 acatgcattattatatgcaggggatgagattcgaaccccagacaccccacttattcaccttgaaaaaggtgaattctatccactaaactacttga 24579263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 527 - 585
Target Start/End: Original strand, 6549222 - 6549280
Alignment:
Q  527 aaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttata 585  Q
    |||| |||||||||||||||||||||||||||||    |||||||||||||||||||||    
T  6549222 aaaagttgtgatattttcttataaataggaccaaatttttttttgaaaattttcttata 6549280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 652 - 738
Target Start/End: Complemental strand, 10020544 - 10020458
Alignment:
Q  652 agggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattctaaccac 738  Q
    ||||||||||||| |||||||| ||||||| | ||||||  || || | |||||||||| |||||||||||| ||||||||| ||||    
T  10020544 agggacatgcattgttatatgcaggggttggggttcgaaccccgaacaacccacttattcatcttgaaaaaggtgaattctacccac 10020458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 699 - 748
Target Start/End: Complemental strand, 32534621 - 32534572
Alignment:
Q  699 accccacttattaatcttgaaaaagatgaattctaaccaccaaactattt 748  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  32534621 accccacttattaaccttaaaaaagatgaattctaaccactaaactattt 32534572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 39844798 - 39844725
Alignment:
Q  98 gtcggaattcgatctaaaagagtcttccaaacaaaagccatgacctttgaaggtgcccccgttttccaaatttg 171  Q
    |||||||| || |||||||||  |||||||||||||||||| ||||||||||| || || || |||||||||||    
T  39844798 gtcggaatacggtctaaaagaaccttccaaacaaaagccatcacctttgaaggagctccggtcttccaaatttg 39844725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 254 - 321
Target Start/End: Complemental strand, 24282108 - 24282038
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaatatttt---ttctaaaagggtcctatagtaaaggac 321  Q
    ||||||||||||||| |||||||||||| ||||| | ||||   |||||||||||||||||| ||||||||    
T  24282108 gaaaatatcaaaagggtcttataaaaagggacaatttttttttcttctaaaagggtcctataataaaggac 24282038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 466 - 553
Target Start/End: Complemental strand, 508550 - 508464
Alignment:
Q  466 tattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaata 553  Q
    ||||||||||||||| |||||||||| | ||  ||| | |||||| |||||||| || |||||||||||||| |||||||| ||||||    
T  508550 tattaaaaagacaaatattaaataagagatacgaaatt-ttttaagcaataacttcaccttaaaaattgtgaaattttcttctaaata 508464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 402 - 485
Target Start/End: Complemental strand, 2122501 - 2122418
Alignment:
Q  402 tttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacatta 485  Q
    ||||||||||| |||||||||| | | || |||| || | | ||||||||||||||   |||||||||||||||||||||||||    
T  2122501 tttttgaatatttttacaaatacagcatcgtaaacaaatgttaagcattaaatacactcactaatattaaaaagacaaacatta 2122418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 624 - 730
Target Start/End: Original strand, 37917384 - 37917490
Alignment:
Q  624 tcgtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaag 723  Q
    ||||||||| |||||||| | |||||| ||| |||||||| ||||||||| ||||||| | ||| ||  | ||| |||||||||||| |  ||||||||     
T  37917384 tcgtccccgtgagcatagctcagttggtaggaacatgcataattatatgcaggggttggggttcaaaccctaaacaccccacttattcactttgaaaaaa 37917483  T
Q  724 atgaatt 730  Q
    |||||||    
T  37917484 atgaatt 37917490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 652 - 738
Target Start/End: Original strand, 44409221 - 44409306
Alignment:
Q  652 agggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattctaaccac 738  Q
    ||||||||||||||||||||||  |||| | | ||||||  || || |||||||||||| | |||||||||| ||||||||||||||    
T  44409221 agggacatgcattattatatgcaagggtcggggttcgaac-ccgaacaccccacttattcaccttgaaaaaggtgaattctaaccac 44409306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 495 - 587
Target Start/End: Complemental strand, 43051504 - 43051415
Alignment:
Q  495 tataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatatt 587  Q
    |||| |||||||| || ||||||||||| |||||||||||||| ||||  ||| ||||||||||||  |  |||||||||||||| |||||||    
T  43051504 tatagaagtctttgaatcaataactacaccttaaaaattgtgacattt--tta-aaataggaccaaatatatttttgaaaattttattatatt 43051415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 647 - 735
Target Start/End: Complemental strand, 7162748 - 7162660
Alignment:
Q  647 ttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattctaac 735  Q
    |||| ||||| ||||||| |||||||| ||||| | | |||||| ||  ||||  ||||||||| |||||||||||| |||||||||||    
T  7162748 ttggcagggatatgcattgttatatgcaggggtcggggttcgaactctgaatattccacttattcatcttgaaaaaggtgaattctaac 7162660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 626 - 750
Target Start/End: Complemental strand, 7392407 - 7392283
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagat 725  Q
    ||||||| |||||||| | | |||| ||| ||||||||| |||||||| | ||||| | || |||  || || |||||||||||| | ||||||||| ||    
T  7392407 gtccccgtgagcatagctcaattggcaggaacatgcattgttatatgcagaggttggggtttgaaccccgaacaccccacttattcaccttgaaaaatat 7392308  T
Q  726 gaattctaaccaccaaactatttga 750  Q
    ||||| || |||| |||||| ||||    
T  7392307 gaattatagccactaaactacttga 7392283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 396 - 516
Target Start/End: Original strand, 15033294 - 15033413
Alignment:
Q  396 tgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggt 495  Q
    |||| ||||||||||   ||||||||||||| || ||||||| |||||||  ||| |||| |   ||||||||| |||||||||| ||||||  || | |    
T  15033294 tgtacctttttgaatgattttacaaatatactctaataaaaatttatgaattattgaatatactcactaatattgaaaagacaaatattaaacgagagct 15033393  T
Q  496 ataaaagtcttttaaacaata 516  Q
    | |||||||||||||||||||    
T  15033394 a-aaaagtcttttaaacaata 15033413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 414 - 522
Target Start/End: Complemental strand, 18145915 - 18145807
Alignment:
Q  414 tttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaaca 513  Q
    |||||||||||||||  ||| ||| || | ||  |||||||||||| ||||||||||||| || || |||||||| |   ||| |||| |||||||||||    
T  18145915 tttacaaatatacccgtatagaaagttgtaaaatattaaatacatccactaatattaaaatgataatcattaaatgaaaagtagaaaaatcttttaaaca 18145816  T
Q  514 ataactaca 522  Q
    |||| ||||    
T  18145815 ataattaca 18145807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 22196866 - 22196758
Alignment:
Q  92 acacgcgtcggaattcgatctaaaagagtcttccaaacaaaagccatgacctttgaaggtgcccccgttttccaaatttgtcggaacaccctccgctccc 191  Q
    |||||||||||||| | ||| | ||||| ||||||||||||| || | ||||| || | |||||| || |||||||||||||  ||||| |||| ||| |    
T  22196866 acacgcgtcggaatccaatcaagaagagccttccaaacaaaatccctcaccttagacgatgccccggtcttccaaatttgtctaaacactctcctctcac 22196767  T
Q  192 cttccggac 200  Q
    | |||||||    
T  22196766 cctccggac 22196758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 200
Target Start/End: Original strand, 22240955 - 22241063
Alignment:
Q  92 acacgcgtcggaattcgatctaaaagagtcttccaaacaaaagccatgacctttgaaggtgcccccgttttccaaatttgtcggaacaccctccgctccc 191  Q
    |||||||||||||| | ||| | ||||| ||||||||||||| || | ||||| || | |||||| || |||||||||||||  ||||| |||| ||| |    
T  22240955 acacgcgtcggaatccaatcaagaagagccttccaaacaaaatccctcaccttagacgatgccccggtcttccaaatttgtctaaacactctcctctcac 22241054  T
Q  192 cttccggac 200  Q
    | |||||||    
T  22241055 cctccggac 22241063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 634 - 738
Target Start/End: Original strand, 32814829 - 32814933
Alignment:
Q  634 gagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattcta 733  Q
    |||||||| | |||||| |||||||||||||||||||||| ||||| |   ||||||| ||  | |||||||||||| || |  |||||| |||||| ||    
T  32814829 gagcatagctcagttggtagggacatgcattattatatgcaggggtcggagttcgaatcccggacaccccacttattcatataaaaaaaggtgaatttta 32814928  T
Q  734 accac 738  Q
    |||||    
T  32814929 accac 32814933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 721
Target Start/End: Original strand, 1513489 - 1513576
Alignment:
Q  634 gagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaa 721  Q
    ||||||| || |||||| ||||||||||||| |||||||  ||||||| | ||||||  || || |||||||||||| | ||||||||    
T  1513489 gagcataaatcagttggcagggacatgcattgttatatgtaggggttgaggttcgaacaccgaacaccccacttattcaccttgaaaa 1513576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 738
Target Start/End: Complemental strand, 2567860 - 2567821
Alignment:
Q  699 accccacttattaatcttgaaaaagatgaattctaaccac 738  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  2567860 accccacttattaaccttgaaaaaggtgaattctaaccac 2567821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 733
Target Start/End: Original strand, 35195837 - 35195944
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagat 725  Q
    |||||||  ||||||| | |||||| |||||||||||||||||||||| ||||  | | ||||||  || || |||||| ||||| | |||||||||| |    
T  35195837 gtccccgtaagcatagctcagttggcagggacatgcattattatatgcaggggccggggttcgaaccccgaacaccccatttattcaccttgaaaaaggt 35195936  T
Q  726 gaattcta 733  Q
    || |||||    
T  35195937 gacttcta 35195944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 1574780 - 1574719
Alignment:
Q  270 tcttataaaaagagacaaatattttttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    |||||||||||| |||| || |||||| |||||||||| |||| | | ||||||||||||||    
T  1574780 tcttataaaaagggacacattttttttttaaaagggtcttataattagggacggaggtagta 1574719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 710
Target Start/End: Complemental strand, 14818467 - 14818382
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggaca-tgcattattatatgcgggggttgtgattcgaattccaaataccccacttatt 710  Q
    ||||||| |||||||| | |||||| ||||||| ||||||||||||||| ||||| | | ||| ||  ||||| ||||||||||||    
T  14818467 gtccccgtgagcatagctcagttggcagggacagtgcattattatatgcaggggtcggggttcaaaccccaaacaccccacttatt 14818382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 710
Target Start/End: Complemental strand, 15265465 - 15265380
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggaca-tgcattattatatgcgggggttgtgattcgaattccaaataccccacttatt 710  Q
    ||||||| |||||||| | |||||| ||||||| ||||||||||||||| ||||| | | ||| ||  ||||| ||||||||||||    
T  15265465 gtccccgtgagcatagctcagttggcagggacagtgcattattatatgcaggggtcggggttcaaaccccaaacaccccacttatt 15265380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 677
Target Start/End: Complemental strand, 32514739 - 32514686
Alignment:
Q  624 tcgtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggg 677  Q
    ||||||||| |||||||| | |||||| || |||||| ||||||||||||||||    
T  32514739 tcgtccccgtgagcatagttcagttggcagagacatgtattattatatgcgggg 32514686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 509
Target Start/End: Complemental strand, 35333373 - 35333328
Alignment:
Q  464 aatattaaaaagacaaacattaaataaggggtataaaagtctttta 509  Q
    ||||||||||||||||||||||||| |||| || |||| |||||||    
T  35333373 aatattaaaaagacaaacattaaatgagggttaaaaaaatctttta 35333328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 7e-73; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 377 - 595
Target Start/End: Complemental strand, 31659029 - 31658811
Alignment:
Q  377 caatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaaga 476  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||| ||||| ||||||||||||||| |||| |||||||||||    
T  31659029 caatacactcattaattagtataattttttgaatatttttacaaatatatcctcataaaaa-ttatgcagcattaaatacatccactagtattaaaaaga 31658931  T
Q  477 caaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaa-attttttgaaaa 575  Q
    |||||||||||||| || || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||  |||||| ||||    
T  31658930 caaacattaaataaaggttaaaaaagtcttttaaacaataactacatcttaaaagttgtgatattttcttataaatagaaccaacaattttttttaaaaa 31658831  T
Q  576 ttttcttatatttaggaccg 595  Q
    ||||||||||| || |||||    
T  31658830 ttttcttatatataagaccg 31658811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 376 - 586
Target Start/End: Complemental strand, 8251414 - 8251204
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |   |||||||||||||||    
T  8251414 ccaatacactcattaattagtgtagttttttgaatatttttacaaatataccctcataaaaaattgtgaagcattaaataaactcactaatattaaaaag 8251315  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaa 575  Q
    |||| |||||||||| ||| | ||| ||||||||| |||||| |||| ||||||| |||||||||||||||||||||||||||||  | |||||| ||||    
T  8251314 acaaccattaaataatggggaaaaaggtcttttaagcaataattacaccttaaaagttgtgatattttcttataaataggaccaaatattttttttaaaa 8251215  T
Q  576 ttttcttatat 586  Q
    |||||||||||    
T  8251214 ttttcttatat 8251204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 380 - 560
Target Start/End: Complemental strand, 2207944 - 2207766
Alignment:
Q  380 tacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaa 479  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||| | | |||||||||||| ||||    
T  2207944 tacactcattatttagtgtaactttttgaatatttttacaaatataccctcataaaaa-ttgtgaagcattaaatacacccattaatattaaaaatacaa 2207846  T
Q  480 acattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaa 560  Q
    ||||||||||||||||| |||| ||||| |  |||||||| |||||||||||||||||||||||| |||||||||||||||    
T  2207845 acattaaataaggggtagaaaattctttaacgcaataactgcatcttaaaaattgtgatattttc-tataaataggaccaa 2207766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 414 - 592
Target Start/End: Complemental strand, 36054956 - 36054778
Alignment:
Q  414 tttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaaca 513  Q
    |||| ||||||||||| || |||||||  |||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36054956 tttataaatatacccttattaaaaattgggaagtattaaatacatccactaatattaaaaagacaaacattaattaaggggtataaaagtcttttaaaca 36054857  T
Q  514 ataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatatttagga 592  Q
    |||| || | ||||||| |||||| |||||||||||||||||||||| || | |||||||||||||||||||| |||||    
T  36054856 ataaatataccttaaaagttgtgacattttcttataaataggaccaaaaattattttgaaaattttcttatatatagga 36054778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 389 - 586
Target Start/End: Original strand, 16890251 - 16890451
Alignment:
Q  389 taattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatatt---aaaaagacaaacatta 485  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||| |   |||||||||   ||||| ||||||| ||    
T  16890251 taattaatgtaactttttgaatatttttacaaatataccctcataaaaaattgtgaaacattaaataaactcactaatatttataaaaaaacaaacaata 16890350  T
Q  486 aataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttata 585  Q
    ||||| ||||| |||||||||| ||||| |||||| | ||||||| ||||||||||||| ||||||||||||||| |   ||||||||| ||||||||||    
T  16890351 aataaagggtagaaaagtctttgaaacactaactataccttaaaagttgtgatattttcatataaataggaccaatatcatttttgaaatttttcttata 16890450  T
Q  586 t 586  Q
    |    
T  16890451 t 16890451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 385 - 565
Target Start/End: Complemental strand, 2152490 - 2152312
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaataca-tcgactaatatt-aaaaagacaaaca 482  Q
    |||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||| |||||||||||||| | ||| |||||||| ||||||| |||||    
T  2152490 tcattagttagtgtaactttttgaatatttttataaatatacccttataaaaaattgtgaagcattaaatagactcg-ctaatattaaaaaagataaaca 2152392  T
Q  483 ttaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaat 565  Q
    |||||||||||||| |||||||||||||  |||||| ||| ||||||||||||||||||||||  ||||||||||||| ||||    
T  2152391 ttaaataaggggtagaaaagtcttttaagtaataac-acaccttaaaaattgtgatattttct--taaataggaccaaaaaat 2152312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 376 - 552
Target Start/End: Original strand, 2520103 - 2520277
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||||||| |||||||||||||| |||| ||||||||||    | ||||||| ||||     
T  2520103 ccaatacattcattaattaatgtaactttttgaatatttttacaaatatatcctcataaaaaattgtgaaacattaaatactctcaataatatttaaaaa 2520202  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaat 552  Q
    |  ||||||||||  | ||||  ||||||| |||| ||||||||||||||||||| |||||| ||||||||||||||    
T  2520203 aggaacattaaat-ggaggta-gaaagtctcttaagcaataactacatcttaaaatttgtgacattttcttataaat 2520277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 385 - 558
Target Start/End: Complemental strand, 1445522 - 1445349
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacatt 484  Q
    ||||| |||| ||||| ||||||||||  |||||||||||||| |||| ||||||| |||| |||||||||||   ||||||||  |||||| |||||||    
T  1445522 tcattgattaatgtaattttttgaatacttttacaaatataccttcattaaaaattgtgaaacattaaatacactcactaatatctaaaagagaaacatt 1445423  T
Q  485 aaataaggggtataaaagtcttttaaacaataac-tacatcttaaaaattgtgatattttcttataaataggacc 558  Q
    |||| |||| || ||||||| ||||| ||||||| |||| ||||||| |||||| ||||||||||||||||||||    
T  1445422 aaat-agggatagaaaagtcatttaagcaataacttacaccttaaaagttgtgacattttcttataaataggacc 1445349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 402 - 600
Target Start/End: Original strand, 38209515 - 38209711
Alignment:
Q  402 tttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaa 501  Q
    ||||| ||||| |||| |||||||||||  |||||| || ||||| ||| |||| | | ||||||||| ||||||| |||||||||| |||| || | ||    
T  38209515 tttttaaatatttttataaatatacccttttaaaaatttgtgaagtatttaatatacccactaatattgaaaagaccaacattaaatgagggttagagaa 38209614  T
Q  502 gtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatatttaggaccgaaggg 600  Q
    |||||||||||||||| |  | ||||||| ||||||  |||||||||||||| |||||  || ||||||  |||||||||||||| |||||||| ||||    
T  38209615 gtcttttaaacaataaatgtaccttaaaagttgtgactttttcttataaatatgacca--aatttttttttaaattttcttatatataggaccggaggg 38209711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 402 - 585
Target Start/End: Original strand, 36408181 - 36408364
Alignment:
Q  402 tttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaa 501  Q
    ||||||||| | |||||||||||||||||||||||| || | ||| ||||| || ||| |||||||||||||||||||||||||||  |||| || ||||    
T  36408181 tttttgaatgtttttacaaatataccctcataaaaatttgttaagtattaattatatccactaatattaaaaagacaaacattaaacgagggttaaaaaa 36408280  T
Q  502 gtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggacc-aacaaattttttgaaaattttcttata 585  Q
    || | ||||||||||| |  | ||| ||| ||||||  |||||||||| ||| |||| ||    |||||||||||||||||||||    
T  36408281 gtttgttaaacaataaatgtacctt-aaagttgtgactttttcttatatataagaccaaagtttttttttgaaaattttcttata 36408364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 455 - 554
Target Start/End: Complemental strand, 40694331 - 40694232
Alignment:
Q  455 acatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaatag 554  Q
    ||||| ||| ||||||||| |||||||| || |||||||||| ||||||||||||| |||||| |||| || |||| |||||||||||||||||||||||    
T  40694331 acatccactgatattaaaatgacaaacactatataaggggtagaaaagtcttttaagcaataattacacctaaaaagttgtgatattttcttataaatag 40694232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 463 - 560
Target Start/End: Complemental strand, 11778129 - 11778032
Alignment:
Q  463 taatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaa 560  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||||   ||||  |||||||||||||||||||  ||||||||||||||| |||||    
T  11778129 taatattaaaaagacaaacattaaataagggttaagaaagtcttttacgaaatagatacatcttaaaaattgtgaccttttcttataaatagaaccaa 11778032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 466 - 559
Target Start/End: Original strand, 30112485 - 30112578
Alignment:
Q  466 tattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggacca 559  Q
    ||||||||||||| ||||||||  |||| || |||| |||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  30112485 tattaaaaagacatacattaaacgagggataaaaaaatcttttaagcaataactacaccttaaaatttgtgacattttcttataaataggacca 30112578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 388 - 495
Target Start/End: Complemental strand, 40314381 - 40314274
Alignment:
Q  388 ttaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaa 487  Q
    ||||||| |||||| |||| ||||| |||||||||||| | ||||||||||||||||| ||||||||||||| || ||||||  ||| | || |||||||    
T  40314381 ttaattaatgtaaccttttaaatatttttacaaatatatcttcataaaaaattatgaaacattaaatacatctacaaatattttaaaaagaagcattaaa 40314282  T
Q  488 taaggggt 495  Q
    ||||||||    
T  40314281 taaggggt 40314274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 461 - 554
Target Start/End: Original strand, 40696612 - 40696704
Alignment:
Q  461 actaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaatag 554  Q
    ||||||||||||| |||||||| || ||||||| || |||||||||||||  ||||| ||||||| |||| |||||||||||||||||||||||    
T  40696612 actaatattaaaatgacaaacactatataaggg-tagaaaagtcttttaaggaataattacatctaaaaagttgtgatattttcttataaatag 40696704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 398 - 480
Target Start/End: Original strand, 30653623 - 30653705
Alignment:
Q  398 taactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaa 480  Q
    ||||||||||||||  |||||||||||||||||||||||| || |||| |||||||||||   |||| |||||||||||||||    
T  30653623 taactttttgaataattttacaaatataccctcataaaaatttgtgaaacattaaatacacaaactagtattaaaaagacaaa 30653705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 645 - 750
Target Start/End: Original strand, 11900579 - 11900683
Alignment:
Q  645 agttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattctaaccaccaaact 744  Q
    |||||| ||| |||||||||||||||||| ||||||| | || |||  | | |||||||||||||| |||||||||||| ||||||||| |||| |||||    
T  11900579 agttggcaggaacatgcattattatatgcaggggttgaggtttgaacac-agataccccacttattcatcttgaaaaaggtgaattctagccactaaact 11900677  T
Q  745 atttga 750  Q
    ||||||    
T  11900678 atttga 11900683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 408 - 585
Target Start/End: Original strand, 30870743 - 30870919
Alignment:
Q  408 aatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttt 507  Q
    ||||| || ||||||||||||| |||||||||| |||| ||||||||| ||| ||||||||||||| |||||||| | |||   || || ||||| | ||    
T  30870743 aatattttgacaaatatacccttataaaaaattgtgaaacattaaatatatccactaatattaaaatgacaaacaat-aatggtggataaaaaagccatt 30870841  T
Q  508 taaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttata 585  Q
    || | || ||||||| |||||||| | ||| ||| || ||||||||| ||||| |  || ||||||||| ||||||||    
T  30870842 tagataaaaactacaccttaaaaagtatgacattatcatataaatagaaccaaaattttgtttgaaaatcttcttata 30870919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 430 - 550
Target Start/End: Complemental strand, 43837058 - 43836938
Alignment:
Q  430 cataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaa 529  Q
    |||||||| ||||||||||||||||||||| | |||||| ||||| | |||||| ||| | |||| | |||| |||||||   | ||| |||| ||||||    
T  43837058 cataaaaagttatgaagcattaaatacatctattaatataaaaaacaaaaacataaaaaatggggcagaaaaatcttttacgtactaattacaccttaaa 43836959  T
Q  530 aattgtgatattttcttataa 550  Q
    |||||| ||||||||||||||    
T  43836958 aattgtaatattttcttataa 43836938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 624 - 734
Target Start/End: Original strand, 7345420 - 7345530
Alignment:
Q  624 tcgtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaag 723  Q
    |||| |||| |||||||  | |||||| |||||||||||||||||||||| ||||| | | ||| || |||||| |||||||||||| | ||| ||||||    
T  7345420 tcgttcccgtgagcataactcagttggcagggacatgcattattatatgcaggggtcgggcttccaactccaaacaccccacttattcaccttaaaaaag 7345519  T
Q  724 atgaattctaa 734  Q
     ||||||||||    
T  7345520 gtgaattctaa 7345530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 738
Target Start/End: Complemental strand, 220460 - 220351
Alignment:
Q  629 cccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaa 728  Q
    |||| |||||||| | |||||| ||||||||||| | |||||||| | |||   | ||||||| ||  | |||||||||||| | |||||||||| ||||    
T  220460 cccgtgagcatagctcagttggcagggacatgcaatgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaa 220361  T
Q  729 ttctaaccac 738  Q
    ||||||||||    
T  220360 ttctaaccac 220351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 738
Target Start/End: Complemental strand, 689615 - 689506
Alignment:
Q  629 cccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaa 728  Q
    |||| |||||||| | |||||| ||||||||||| | |||||||| | |||   | ||||||| ||  | |||||||||||| | |||||||||| ||||    
T  689615 cccgtgagcatagctcagttggcagggacatgcaatgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaa 689516  T
Q  729 ttctaaccac 738  Q
    ||||||||||    
T  689515 ttctaaccac 689506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 738
Target Start/End: Complemental strand, 734083 - 733974
Alignment:
Q  629 cccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaa 728  Q
    |||| |||||||| | |||||| ||||||||||| | |||||||| | |||   | ||||||| ||  | |||||||||||| | |||||||||| ||||    
T  734083 cccgtgagcatagctcagttggcagggacatgcaatgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaa 733984  T
Q  729 ttctaaccac 738  Q
    ||||||||||    
T  733983 ttctaaccac 733974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 738
Target Start/End: Complemental strand, 857979 - 857870
Alignment:
Q  629 cccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaa 728  Q
    |||| |||||||| | |||||| ||||||||||| | |||||||| | |||   | ||||||| ||  | |||||||||||| | |||||||||| ||||    
T  857979 cccgtgagcatagctcagttggcagggacatgcaatgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaa 857880  T
Q  729 ttctaaccac 738  Q
    ||||||||||    
T  857879 ttctaaccac 857870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 419 - 556
Target Start/End: Complemental strand, 29917099 - 29916963
Alignment:
Q  419 aaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataac 518  Q
    ||||||||||| | |||||| | ||||||||||||||||   |||||||||||||| | ||  ||||||| || | || ||| || ||||||  |||||     
T  29917099 aaatataccctta-aaaaaactgtgaagcattaaatacactcactaatattaaaaaaagaagtattaaatgagagatagaaatgttttttaagtaataat 29917001  T
Q  519 tacatcttaaaaattgtgatattttcttataaatagga 556  Q
    ||||| |||||| |||| | ||||| ||||||||||||    
T  29917000 tacattttaaaagttgtaacatttttttataaatagga 29916963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 506 - 587
Target Start/End: Complemental strand, 35431633 - 35431553
Alignment:
Q  506 tttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatatt 587  Q
    |||||||||| |||| |  |||||| |||||| ||||||||||||||||||||||    | |||||||||||||||||||||    
T  35431633 tttaaacaatgactataatttaaaagttgtgacattttcttataaataggaccaa-ttttattttgaaaattttcttatatt 35431553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 419 - 487
Target Start/End: Complemental strand, 27518600 - 27518532
Alignment:
Q  419 aaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaa 487  Q
    |||||| |||||||||||| || |||   ||||||| |||| |||||||||||||||||||| ||||||    
T  27518600 aaatatgccctcataaaaagttgtgatatattaaatgcatccactaatattaaaaagacaaaaattaaa 27518532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 504 - 556
Target Start/End: Original strand, 30654260 - 30654312
Alignment:
Q  504 cttttaaacaataactacatcttaaaaattgtgatattttcttataaatagga 556  Q
    ||||||| |||||||||||  |||||| |||||||||||||||||| ||||||    
T  30654260 cttttaagcaataactacactttaaaagttgtgatattttcttatatatagga 30654312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 18111937 - 18112012
Alignment:
Q  256 aaatatcaaaaggatcttataaaaagagacaaatattttttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    ||||| |||| || |||||||||||| ||||| | ||||||| ||||||||| |||| | | ||||||||||||||    
T  18111937 aaatagcaaaggggtcttataaaaagggacaatttttttttccaaaagggtcttataattagggacggaggtagta 18112012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 560
Target Start/End: Original strand, 21504884 - 21504935
Alignment:
Q  509 aaacaataactacatcttaaaaattgtgatattttcttataaataggaccaa 560  Q
    ||||||||| |||||||||||| |||| | |||||||||||||| |||||||    
T  21504884 aaacaataaatacatcttaaaagttgtaacattttcttataaattggaccaa 21504935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 750
Target Start/End: Original strand, 35779820 - 35779871
Alignment:
Q  699 accccacttattaatcttgaaaaagatgaattctaaccaccaaactatttga 750  Q
    |||||||||||| |||||||||||||||||||||| || | |||||| ||||    
T  35779820 accccacttattcatcttgaaaaagatgaattctagcctctaaactacttga 35779871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 498 - 553
Target Start/End: Original strand, 36204128 - 36204183
Alignment:
Q  498 aaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaata 553  Q
    |||||| ||||||||||| |||| || ||||||||||||| ||||| |||||||||    
T  36204128 aaaagtattttaaacaatgactatattttaaaaattgtgacatttttttataaata 36204183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 270 - 331
Target Start/End: Original strand, 13568880 - 13568942
Alignment:
Q  270 tcttataaaaagagacaaatattttttct-aaaagggtcctatagtaaaggacggaggtagta 331  Q
    |||||||||||| ||||||| |||| ||| ||||||||| |||| | ||||||||||||||||    
T  13568880 tcttataaaaagggacaaattttttctctcaaaagggtcttataattaaggacggaggtagta 13568942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 635 - 681
Target Start/End: Original strand, 16611588 - 16611634
Alignment:
Q  635 agcatagatgagttggaagggacatgcattattatatgcgggggttg 681  Q
    ||||||||| |||||| |||||||||||||||||||||  |||||||    
T  16611588 agcatagatcagttggcagggacatgcattattatatgtaggggttg 16611634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 376 - 438
Target Start/End: Original strand, 43594385 - 43594446
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaa 438  Q
    |||||| | ||||||||||  |||||||||| ||||| ||||| |||||||||||||||||||    
T  43594385 ccaatataatcattaattaa-gtaactttttaaatatttttactaatataccctcataaaaaa 43594446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 690
Target Start/End: Original strand, 10292345 - 10292410
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggaca-tgcattattatatgcgggggttgtgattcgaa 690  Q
    ||||||| |||||||| | |||||| ||||||| ||||||||||||||| |||| || ||||||||    
T  10292345 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggctgagattcgaa 10292410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 498 - 559
Target Start/End: Original strand, 11388093 - 11388154
Alignment:
Q  498 aaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggacca 559  Q
    |||| ||||||| | |||||||||| |||||||||||||  ||||||||| |||| ||||||    
T  11388093 aaaaatcttttatataataactacaacttaaaaattgtgtcattttcttaaaaattggacca 11388154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 738
Target Start/End: Complemental strand, 22847344 - 22847251
Alignment:
Q  645 agttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattctaaccac 738  Q
    |||||| ||||||||||||| |||||||| ||||| | | ||||||  ||| | ||| |||||||| | ||| |||||| ||||||||| ||||    
T  22847344 agttggcagggacatgcattgttatatgcaggggtcgaggttcgaaccccacacacctcacttattcaccttaaaaaaggtgaattctagccac 22847251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 3e-69; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 385 - 606
Target Start/End: Complemental strand, 38496642 - 38496421
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacatt 484  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||  |  ||| ||||||||||| | |||||||||||||| |||||| ||    
T  38496642 tcattaattagtgtaactttttgaatatttttacaaatataccctgataaaaatgtgcgaaacattaaatacacctactaatattaaaaatacaaacgtt 38496543  T
Q  485 aaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttat 584  Q
    |||||||||||| ||| ||||||||||||||||||| | |||||||||| ||| ||||||||||||||||||| |||| |||||||||||||||||||||    
T  38496542 aaataaggggtagaaaggtcttttaaacaataactataccttaaaaattctgacattttcttataaataggactaacatattttttgaaaattttcttat 38496443  T
Q  585 atttaggaccgaagggagtata 606  Q
    || ||||| || ||||||||||    
T  38496442 atataggatcggagggagtata 38496421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 387 - 605
Target Start/End: Complemental strand, 3269524 - 3269306
Alignment:
Q  387 attaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaa 486  Q
    |||||||||| ||||||||||||||| |||||||||||||||| ||||||| || |||||| ||||||||| | | |||||||||||| | |||||||||    
T  3269524 attaattagtataactttttgaatatttttacaaatatacccttataaaaagttgtgaagccttaaatacacctattaatattaaaaacaaaaacattaa 3269425  T
Q  487 ataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatat 586  Q
    |||||||||| ||||||||||||  ||||||||||| ||||||| ||||||||||||||||||| | |||||||  | ||||||||||||||||||||||    
T  3269424 ataaggggtagaaaagtcttttaggcaataactacaccttaaaagttgtgatattttcttataatttggaccaaagatttttttgaaaattttcttatat 3269325  T
Q  587 ttaggaccgaagggagtat 605  Q
     ||||| || |||||||||    
T  3269324 ataggaacggagggagtat 3269306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 387 - 605
Target Start/End: Complemental strand, 3270083 - 3269865
Alignment:
Q  387 attaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaa 486  Q
    |||||||||| ||||||||||||||| |||||||||||||||| ||||||| || |||||| ||||||||| | | |||||||||||| | |||||||||    
T  3270083 attaattagtataactttttgaatatttttacaaatatacccttataaaaagttgtgaagccttaaatacacctattaatattaaaaacaaaaacattaa 3269984  T
Q  487 ataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatat 586  Q
    |||||||||| ||||||||||||  ||||||||||| ||||||| ||||||||||||||||||| | |||||||  | ||||||||||||||||||||||    
T  3269983 ataaggggtagaaaagtcttttaggcaataactacaccttaaaagttgtgatattttcttataatttggaccaaagatttttttgaaaattttcttatat 3269884  T
Q  587 ttaggaccgaagggagtat 605  Q
     ||||| || |||||||||    
T  3269883 ataggaacggagggagtat 3269865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 387 - 585
Target Start/End: Complemental strand, 3268965 - 3268767
Alignment:
Q  387 attaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaa 486  Q
    |||||||||| ||||||||||||||| |||||||||||||||| ||||||| || |||||| ||||||||| | | |||||||||||| | |||||||||    
T  3268965 attaattagtataactttttgaatatttttacaaatatacccttataaaaagttgtgaagccttaaatacacctattaatattaaaaacaaaaacattaa 3268866  T
Q  487 ataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttata 585  Q
    |||||||||| ||||||||||||  ||||||||||| ||||||| ||||||||||||||||||| | |||||||  | |||||||||||||||||||||    
T  3268865 ataaggggtagaaaagtcttttaggcaataactacaccttaaaagttgtgatattttcttataatttggaccaaagatttttttgaaaattttcttata 3268767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 385 - 560
Target Start/End: Complemental strand, 40504044 - 40503869
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacatt 484  Q
    ||||||||||||||||  |||||||||| |||||| ||||||||||||||||| || ||||||||||||| || | |||||||||||||||||||||| |    
T  40504044 tcattaattagtgtaatcttttgaatatttttacagatataccctcataaaaagttgtgaagcattaaatgcacctactaatattaaaaagacaaacaat 40503945  T
Q  485 aaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaa 560  Q
    ||||||||||||||||||| ||||||||||||| |||| ||||||| |||||| |||||||||||||| |||||||    
T  40503944 aaataaggggtataaaagttttttaaacaataattacaccttaaaagttgtgacattttcttataaatgggaccaa 40503869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 376 - 605
Target Start/End: Complemental strand, 38214291 - 38214061
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    |||||||| ||||| ||||  | |||||||||||||| |||||||||||| |||||||||||||| |||| |||||||||||   |||||||||||||||    
T  38214291 ccaatacaatcattgattaaagaaactttttgaatatttttacaaatatatcctcataaaaaattgtgaaacattaaatacacatactaatattaaaaag 38214192  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaaca-aattttttgaaa 574  Q
    | ||  ||||||| |||| ||||||||||||||||||||||| |||| ||||||| ||||||  ||||||||||||| ||||||| |   ||||||||||    
T  38214191 agaagtattaaatgagggatataaaagtcttttaaacaataaatacaccttaaaagttgtgaatttttcttataaattggaccaaaatttttttttgaaa 38214092  T
Q  575 attttcttatatttaggaccgaagggagtat 605  Q
     |||||||||| | |||||||||||||||||    
T  38214091 tttttcttataataaggaccgaagggagtat 38214061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 385 - 604
Target Start/End: Complemental strand, 40442887 - 40442668
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacatt 484  Q
    |||||||||||| |||  |||||||||| |||| | ||||||||| ||||||| || ||||||||||||| || | |||||||||||||||| ||||| |    
T  40442887 tcattaattagtataatcttttgaatatttttatagatatacccttataaaaagttgtgaagcattaaatgcacctactaatattaaaaagataaacaat 40442788  T
Q  485 aaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttat 584  Q
    ||||||||||||||||||| ||||||||||||| |||| ||||||| |||||| |||||||||||||||||| ||| |||   |||||||| |||||| |    
T  40442787 aaataaggggtataaaagttttttaaacaataattacaccttaaaagttgtgacattttcttataaataggatcaaaaaaaaatttgaaaaatttctttt 40442688  T
Q  585 atttaggaccgaagggagta 604  Q
    || |||||||| || |||||    
T  40442687 atataggaccggagagagta 40442668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 376 - 604
Target Start/End: Original strand, 39063564 - 39063793
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    |||||||| ||||| ||||  | |||||||||||||| |||||||||||| |||||||||||||| |||| |||||||||||   |||||||||||||||    
T  39063564 ccaatacaatcattgattaaagaaactttttgaatatttttacaaatataacctcataaaaaattgtgaaacattaaatacacacactaatattaaaaag 39063663  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaa-caaattttttgaaa 574  Q
    | ||  ||||||| ||   ||||||||||||||||||||||| |||| ||||||| ||||||  ||||||||||||| |||||||    ||||||| |||    
T  39063664 agaagtattaaatgagcaatataaaagtcttttaaacaataaatacaccttaaaagttgtgaatttttcttataaattggaccaattttatttttttaaa 39063763  T
Q  575 attttcttatatttaggaccgaagggagta 604  Q
    ||||||||||| | ||||||| ||||||||    
T  39063764 attttcttataataaggaccggagggagta 39063793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 385 - 604
Target Start/End: Original strand, 4015767 - 4015987
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacatt 484  Q
    |||||||||||| ||||||||||||||  | || |||||||||||| | |||||||||||| |||||||| || | |||||||||| |||||||||||||    
T  4015767 tcattaattagtctaactttttgaataattatataaatataccctcgttaaaaattatgaaacattaaatgcacctactaatattacaaagacaaacatt 4015866  T
Q  485 aaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaatttt--ttgaaaattttctt 582  Q
    || ||||||||| |||||||||||||||| |||||| ||||| | | ||||||  |||||||||||||| | ||||    ||||  |||||||||| |||    
T  4015867 aactaaggggtagaaaagtcttttaaacattaactatatctt-agagttgtgactttttcttataaatatgcccaatttttttttgttgaaaatttcctt 4015965  T
Q  583 atatttaggaccgaagggagta 604  Q
    |||| |||||||| ||||||||    
T  4015966 atatataggaccggagggagta 4015987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 399 - 605
Target Start/End: Complemental strand, 19286035 - 19285829
Alignment:
Q  399 aactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtata 498  Q
    |||||||| ||||  |||||||||||| ||  ||| ||| || |||| ||||||||||||  ||||||||| |||||||||| ||||||| | || ||||    
T  19286035 aactttttaaataattttacaaatatatccctatagaaagttgtgaaccattaaatacattcactaatattgaaaagacaaatattaaatgaaggatata 19285936  T
Q  499 aaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatatttaggaccgaag 598  Q
    |||||||||||  ||||||||||| ||||||| |||||| | || |||||||||||||||||    ||||||||||||||||||||| | |||| || ||    
T  19285935 aaagtcttttatgcaataactacaccttaaaacttgtgacaattacttataaataggaccaaatttttttttgaaaattttcttataataaggatcggag 19285836  T
Q  599 ggagtat 605  Q
    |||||||    
T  19285835 ggagtat 19285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 385 - 560
Target Start/End: Complemental strand, 16781430 - 16781256
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacatt 484  Q
    |||||||||||| ||| ||||||||||  | ||||||||||||||||| ||||||  |||| ||||||||||| | |||||||||| |||||||||||||    
T  16781430 tcattaattagtctaattttttgaataattatacaaatataccctcattaaaaatggtgaaacattaaatacacctactaatattacaaagacaaacatt 16781331  T
Q  485 aaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaa 560  Q
    || ||||| ||| |||||||||||||||| ||| || | ||| ||| ||||||  |||||||||||||| ||||||    
T  16781330 aactaaggcgtagaaaagtcttttaaacattaattatacctt-aaagttgtgactttttcttataaatatgaccaa 16781256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 376 - 595
Target Start/End: Complemental strand, 40664413 - 40664191
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatatt-aaaaa 474  Q
    |||||||| ||||||||||  | ||||||||||||||  |||||||||||||||| ||||||||| |||| |||||||||||   || ||| || |||||    
T  40664413 ccaatacaatcattaattaaagaaactttttgaatattcttacaaatataccctcgtaaaaaattgtgaaacattaaatacacacaccaatgttaaaaaa 40664314  T
Q  475 gacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaa--caaattttttga 572  Q
    || || |||||||| |||| ||||||||||||||||| ||||| ||||  |||| | |||||| |||||||||| ||| |||||||      ||||||||    
T  40664313 gagaagcattaaatgagggatataaaagtcttttaaataataaatacactttaagagttgtgaaattttcttatcaattggaccaattttttttttttga 40664214  T
Q  573 aaattttcttatatttaggaccg 595  Q
    ||||||||||||| | |||||||    
T  40664213 aaattttcttataataaggaccg 40664191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 396 - 517
Target Start/End: Complemental strand, 32872499 - 32872378
Alignment:
Q  396 tgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggt 495  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||| ||||| |||||||| | | ||||||||||||| |||||||||||||| |||| |    
T  32872499 tgtaattttttgaatgtttttacaaatataccctcataaaaaattgtgaagtattaaatatacccactaatattaaaaggacaaacattaaattagggtt 32872400  T
Q  496 ataaaagtcttttaaacaataa 517  Q
      ||||||||||||||||||||    
T  32872399 ggaaaagtcttttaaacaataa 32872378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 402 - 605
Target Start/End: Complemental strand, 7011243 - 7011043
Alignment:
Q  402 tttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaa 501  Q
    ||||||||| | ||||||||||||| |||||||||| || ||||| |||||||| | | ||||||||| |||||| |    |||||| |||| || ||||    
T  7011243 tttttgaatgtttttacaaatatactctcataaaaatttgtgaagtattaaatatacccactaatattgaaaagata----ttaaatgagggttagaaaa 7011148  T
Q  502 gtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaa-caaattttttgaaaattttcttatatttaggaccgaaggg 600  Q
    |||||||||||||||| |  ||||||||||||||||  ||||||||||||||| | |||   | |||||| ||||||||||||||  |||||||| | ||    
T  7011147 gtcttttaaacaataaatgtatcttaaaaattgtgactttttcttataaatagaatcaatttattttttttaaaattttcttataaataggaccggatgg 7011048  T
Q  601 agtat 605  Q
    |||||    
T  7011047 agtat 7011043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 402 - 517
Target Start/End: Complemental strand, 31405097 - 31404982
Alignment:
Q  402 tttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaa 501  Q
    ||||||||||| |||||||||||| ||||||| ||| |||||||| |||||||| ||  |||||||||||||||||||| ||||||| |||| || ||||    
T  31405097 tttttgaatatttttacaaatatatcctcatagaaatttatgaagtattaaatatatgcactaatattaaaaagacaaatattaaatgagggttagaaaa 31404998  T
Q  502 gtcttttaaacaataa 517  Q
    |||||||||| |||||    
T  31404997 gtcttttaaaaaataa 31404982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 402 - 556
Target Start/End: Original strand, 14200363 - 14200516
Alignment:
Q  402 tttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaa 501  Q
    ||||||||| | |||||||||||||||||||||||| || ||||| |||||||| |   ||||||||| ||||||  |||||||||| |||| || ||||    
T  14200363 tttttgaatgtttttacaaatataccctcataaaaatttgtgaagtattaaatatactcactaatattgaaaagatcaacattaaatgagggttaaaaaa 14200462  T
Q  502 gtcttttaaacaataactacatcttaaaaattgtgatattttcttataaatagga 556  Q
    |||||||||| ||||| |  ||||||||| ||||||  |||||||||||||||||    
T  14200463 gtcttttaaataataaatgtatcttaaaagttgtga-cttttcttataaatagga 14200516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 401 - 583
Target Start/End: Original strand, 31365036 - 31365218
Alignment:
Q  401 ctttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaa 500  Q
    |||||| || || ||||||||||||| || ||| ||  || ||||  |||||||||||| |||||||||||||| | || | |||||| ||   || |||    
T  31365036 cttttttaaaatttttacaaatatacacttatagaatgttgtgaaatattaaatacatccactaatattaaaaaaagaacctttaaatgagatatagaaa 31365135  T
Q  501 agtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttctta 583  Q
    ||| ||||||   |||||| || |||||||||||||| |||| |||||||| | |||||| | ||||||||||||||||||||    
T  31365136 agttttttaagtcataactccaccttaaaaattgtgacatttccttataaacatgaccaaaatattttttgaaaattttctta 31365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 399 - 476
Target Start/End: Complemental strand, 21794992 - 21794914
Alignment:
Q  399 aactttttgaatatgtttacaaatataccctcataa-aaaattatgaagcattaaatacatcgactaatattaaaaaga 476  Q
    |||||||||||||| ||||||||||||||||||||| |||||| |||| |||||||||||   ||||||||||||||||    
T  21794992 aactttttgaatatttttacaaatataccctcataaaaaaattgtgaaacattaaatacacacactaatattaaaaaga 21794914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 626 - 738
Target Start/End: Original strand, 34107268 - 34107380
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagat 725  Q
    ||||||| |||||||| | |||||| ||||||||| || ||||||||| ||||||| | |||||| |||| | |||||||||||| | |||||||||  |    
T  34107268 gtccccgtgagcatagctcagttggcagggacatgtataattatatgcaggggttgaggttcgaactccagacaccccacttattcaccttgaaaaatgt 34107367  T
Q  726 gaattctaaccac 738  Q
    |||||||| ||||    
T  34107368 gaattctagccac 34107380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 626 - 740
Target Start/End: Original strand, 22355077 - 22355191
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagat 725  Q
    ||||||| |||||||| | |||||| | ||||||||||| |||| ||| ||||||| | |||||| |||| | |||||||||||| | |||| ||||| |    
T  22355077 gtccccgtgagcatagctcagttggcaaggacatgcattgttatgtgcaggggttgagtttcgaactccagacaccccacttattcaccttgcaaaaggt 22355176  T
Q  726 gaattctaaccacca 740  Q
    |||||||| ||||||    
T  22355177 gaattctagccacca 22355191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 480 - 560
Target Start/End: Original strand, 3711912 - 3711991
Alignment:
Q  480 acattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaa 560  Q
    |||||||||||| | || |||||||||||||||||||||||   ||||||| |||||| |||||||||||||||| |||||    
T  3711912 acattaaataagcgataaaaaagtcttttaaacaataacta-tccttaaaagttgtgacattttcttataaatagaaccaa 3711991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 461 - 517
Target Start/End: Complemental strand, 34262802 - 34262746
Alignment:
Q  461 actaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataa 517  Q
    |||||||||||||||||||||||||| | |||| || ||||||||||||||||||||    
T  34262802 actaatattaaaaagacaaacattaattgagggttagaaaagtcttttaaacaataa 34262746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 461 - 560
Target Start/End: Complemental strand, 35310899 - 35310800
Alignment:
Q  461 actaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgt-gatattttcttataaataggacca 559  Q
    ||||||||| ||| ||||||||||||||||||| || ||||  |||||||||||||| || ||||||||| | || ||| ||||||||||||||| ||||    
T  35310899 actaatatttaaaggacaaacattaaataagggcta-aaaaaccttttaaacaataaatatatcttaaaagtagtggattttttcttataaatagaacca 35310801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 652 - 723
Target Start/End: Original strand, 40471173 - 40471244
Alignment:
Q  652 agggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaag 723  Q
    |||||||||||||||||||||| ||||||| ||||||||| || || ||||||||||||  |||| ||||||    
T  40471173 agggacatgcattattatatgcaggggttgggattcgaatcccgaacaccccacttattcttcttcaaaaag 40471244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 402 - 516
Target Start/End: Original strand, 45723913 - 45724028
Alignment:
Q  402 tttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataagggg-tataaa 500  Q
    ||||||||| |  ||||||||||| | ||||||||| |||| ||| |||||||| | | ||||||||| ||||||| || ||||||| ||||| || |||    
T  45723913 tttttgaatgttgttacaaatatatcttcataaaaatttataaagtattaaatatacctactaatattgaaaagaccaatattaaatgaggggctaaaaa 45724012  T
Q  501 agtcttttaaacaata 516  Q
    | ||||||||||||||    
T  45724013 aatcttttaaacaata 45724028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 470 - 543
Target Start/End: Complemental strand, 16268448 - 16268375
Alignment:
Q  470 aaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatatttt 543  Q
    |||||||||||||| |||||| || || |||||| |||| ||||||||| | ||||||||| ||||||||||||    
T  16268448 aaaaagacaaacataaaataaaggttagaaaagtattttgaacaataacaatatcttaaaagttgtgatatttt 16268375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 9701145 - 9701070
Alignment:
Q  256 aaatatcaaaaggatcttataaaaagagacaaat-attttttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    ||||| ||||||| |||||||||||| ||||||| |||||||| ||||||||| |||| | ||||||||||||||||    
T  9701145 aaataccaaaagggtcttataaaaagggacaaattattttttc-aaaagggtcttataattaaggacggaggtagta 9701070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 385 - 445
Target Start/End: Complemental strand, 2761682 - 2761620
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaa--atataccctcataaaaaattatgaa 445  Q
    |||||||||||||||||||||||||||| |||| ||  ||||| |||||||||||||| ||||    
T  2761682 tcattaattagtgtaactttttgaatatttttataaatatatatcctcataaaaaattgtgaa 2761620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 503 - 605
Target Start/End: Complemental strand, 21794907 - 21794804
Alignment:
Q  503 tcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggacc-aacaaattttttgaaaattttcttatatttaggaccgaaggga 601  Q
    ||||||||||||| | |||| ||||||| ||||||  ||||||||||||| ||||| ||    ||||||||||||||||||||  | |||||| ||||||    
T  21794907 tcttttaaacaattaatacaccttaaaagttgtgaatttttcttataaattggaccaaattttttttttgaaaattttcttatgataaggacctaaggga 21794808  T
Q  602 gtat 605  Q
    ||||    
T  21794807 gtat 21794804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 463 - 509
Target Start/End: Original strand, 17368928 - 17368974
Alignment:
Q  463 taatattaaaaagacaaacattaaataaggggtataaaagtctttta 509  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||    
T  17368928 taatattaaaaagacaaacattaaataaggactaaaaaagtctttta 17368974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 376 - 426
Target Start/End: Complemental strand, 21229661 - 21229611
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatatac 426  Q
    ||||| || |||||||||| ||||||||||||||||| |||||||||||||    
T  21229661 ccaatgcaatcattaattattgtaactttttgaatatttttacaaatatac 21229611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 738
Target Start/End: Complemental strand, 39334963 - 39334870
Alignment:
Q  645 agttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattctaaccac 738  Q
    |||||| |||||||||||||||||||| | |||| || | |||||| |||| | | |||||||||| |  ||||||||| ||||||||| ||||    
T  39334963 agttggcagggacatgcattattatatacaggggctggggttcgaactccagacatcccacttattcactttgaaaaaggtgaattctagccac 39334870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 7116261 - 7116336
Alignment:
Q  256 aaatatcaaaaggatcttataaaaagagacaaatattttttct-aaaagggtcctatagtaaaggacggaggtagta 331  Q
    ||||| |||||||||||||||||||| ||| ||| |||||||| ||||||||| |||| | | ||||||||||||||    
T  7116261 aaatagcaaaaggatcttataaaaagggac-aattttttttctcaaaagggtcttataattagggacggaggtagta 7116336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 21229584 - 21229486
Alignment:
Q  462 ctaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaa--ttgtgatattttcttataaataggacca 559  Q
    ||||||||||||||||| | ||||||  ||||||| ||||||||||| ||  ||||||||| ||||||||  ||||||   |||||||||||||| ||||    
T  21229584 ctaatattaaaaagacacatattaaacgaggggtagaaaagtctttt-aagtataactacaccttaaaaaagttgtgacgatttcttataaatagtacca 21229486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 451 - 535
Target Start/End: Original strand, 28650239 - 28650323
Alignment:
Q  451 aaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgt 535  Q
    ||||||| | |||||||||||||||| || |||||||| |    || |||||||||||||| |||||||||| ||||||| ||||    
T  28650239 aaatacacctactaatattaaaaagagaagcattaaattaaatatagaaaagtcttttaaataataactacaccttaaaagttgt 28650323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 396 - 456
Target Start/End: Complemental strand, 34309370 - 34309310
Alignment:
Q  396 tgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatac 456  Q
    ||||| |||||||||   |||||||||||||||||||||||| || ||||| |||||||||    
T  34309370 tgtaattttttgaatgcttttacaaatataccctcataaaaatttgtgaagtattaaatac 34309310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 12890170 - 12890245
Alignment:
Q  256 aaatatcaaaaggatcttataaaaagagacaaatattttttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    ||||| |||| || |||||||||||| ||||||| ||||||  ||||||||| |||| | | ||||||||||||||    
T  12890170 aaatagcaaaggggtcttataaaaagggacaaatttttttttcaaaagggtcttataattagggacggaggtagta 12890245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 605
Target Start/End: Complemental strand, 23960074 - 23959979
Alignment:
Q  510 aacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatatttaggaccgaagggagtat 605  Q
    |||| |||||||| |||||||||| ||| ||||||||||||| |||| ||| |  |||||| |||| |||||||| || | ||||| || ||||||    
T  23960074 aacagtaactacaccttaaaaattatgacattttcttataaaaaggagcaaaactttttttaaaaaatttcttatcttaatgaccggagagagtat 23959979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 553
Target Start/End: Original strand, 44883267 - 44883310
Alignment:
Q  510 aacaataactacatcttaaaaattgtgatattttcttataaata 553  Q
    |||||||| || | ||||||||||||||||||||||||||||||    
T  44883267 aacaataaatataccttaaaaattgtgatattttcttataaata 44883310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 699 - 737
Target Start/End: Complemental strand, 29896189 - 29896151
Alignment:
Q  699 accccacttattaatcttgaaaaagatgaattctaacca 737  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  29896189 accccacttattcaccttgaaaaagatgaattctaacca 29896151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 655 - 733
Target Start/End: Original strand, 37123209 - 37123287
Alignment:
Q  655 gacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattcta 733  Q
    ||||||||||||||||||| ||||| | |||||||| |||  | |||| ||||||| |  || ||||||||||||||||    
T  37123209 gacatgcattattatatgcaggggtcgagattcgaactccggacaccctacttattcactttaaaaaagatgaattcta 37123287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 2060376 - 2060315
Alignment:
Q  272 ttataaaaagagacaaatattttttct-aaaagggtcctatagtaaaggacggaggtagtac 332  Q
    |||||||||| ||||||| |||||||| ||||||||| |||| | | |||||||||||||||    
T  2060376 ttataaaaagggacaaattttttttctcaaaagggtcttataattagggacggaggtagtac 2060315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 498 - 560
Target Start/End: Complemental strand, 2761599 - 2761535
Alignment:
Q  498 aaaagtcttttaaacaataactacatcttaaaaattgtgatatttt--cttataaataggaccaa 560  Q
    |||||| ||||||||||||| ||||  |||||| ||||||||||||   ||||||||||||||||    
T  2761599 aaaagtattttaaacaataattacactttaaaagttgtgatatttttatttataaataggaccaa 2761535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 7016158 - 7016090
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaatattttttctaaaagggtcctatagtaaaggacgg 323  Q
    |||||||| |||| |||||||||||||||||| | | ||||| |||||| ||| ||||| ||||||||||    
T  7016158 gaaaatattaaaatgatcttataaaaagagac-attttttttactaaaaaggttctataataaaggacgg 7016090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 133; Significance: 1e-68; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 376 - 604
Target Start/End: Complemental strand, 154518 - 154290
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| || ||||||||||||| | |||||||||||||||| | || ||||||||||||    
T  154518 ccaatacactcattaattagtgtaacttgttgaatatttttacaaacatgccctcataaaaaactgtgaagcattaaatacacccaccaatattaaaaag 154419  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaa 575  Q
    |||||||||||||||  |||| ||| ||||||||||||||||||||| ||||||| |||| |||||||||||||||||| ||||| |||||||   ||||    
T  154418 acaaacattaaataaaaggtaaaaaggtcttttaaacaataactacaccttaaaagttgtaatattttcttataaatagaaccaaaaaattttaaaaaaa 154319  T
Q  576 ttttcttatatttaggaccgaagggagta 604  Q
    ||| ||||||| |||||||| ||||||||    
T  154318 tttccttatatataggaccggagggagta 154290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 4e-56; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 376 - 537
Target Start/End: Original strand, 31707322 - 31707480
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||   ||||| | |||||||||||||||    
T  31707322 ccaatacactcattaattagtgtaactttttgaatatttttacaaatataccctcataaaaatttatgaagcat---atacacccactaatattaaaaag 31707418  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtga 537  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||||||| ||||||| ||||||    
T  31707419 acaaacattaaataaggggtagaaaagtcttctaagcaataactacaccttaaaagttgtga 31707480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 385 - 583
Target Start/End: Complemental strand, 18838921 - 18838723
Alignment:
Q  385 tcattaattagtgtaactttttgaat-atgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacat 483  Q
    |||||||||| | ||| ||||||||| || ||||||||||||||||||||||||||| |||| ||||||||||| | |||||||||||||||| || |||    
T  18838921 tcattaattaatataaatttttgaattatttttacaaatataccctcataaaaaattgtgaaacattaaatacacccactaatattaaaaagataatcat 18838822  T
Q  484 taaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttctta 583  Q
    ||||| | ||||| |||||||||||||||||||| || | ||||||| || ||| ||||||| |||||||| ||||| || |||||| ||||||||||||    
T  18838821 taaatga-gggtagaaaagtcttttaaacaataattataccttaaaagttatgacattttctcataaatagaaccaaaaagttttttaaaaattttctta 18838723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 423 - 609
Target Start/End: Complemental strand, 34319682 - 34319497
Alignment:
Q  423 ataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactaca 522  Q
    |||||||||||||||||| | || ||||||||| ||| |  ||||||||||||| ||||||||||||| ||||| |||||  ||||||||||||||  ||    
T  34319682 ataccctcataaaaaattgtaaaacattaaatatatccataaatattaaaaagaaaaacattaaataa-gggtagaaaagctttttaaacaataaccgca 34319584  T
Q  523 tcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatatttaggaccgaagggagtataata 609  Q
      ||||||||||||| ||||||||||||||||||||||    ||||||||||||||||||||| | ||||||| ||| |||| ||||    
T  34319583 ctttaaaaattgtgacattttcttataaataggaccaagtttttttttgaaaattttcttataataaggaccggaggaagtacaata 34319497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 396 - 608
Target Start/End: Original strand, 25376834 - 25377044
Alignment:
Q  396 tgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggt 495  Q
    ||||| ||||||||| | ||||||||||||||||| |||||| || ||||| |||||||| |   || |||||| ||||||  |||||||||| |||| |    
T  25376834 tgtaattttttgaatgtttttacaaatataccctcttaaaaatttgtgaagtattaaatatactcacaaatattgaaaagatcaacattaaatgagggtt 25376933  T
Q  496 ataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatatttaggaccg 595  Q
    | |||||||||||||||||||| || | |||||||  |||||  ||||||| |||||| ||| || |  |||||| ||||||||||  ||||||||||||    
T  25376934 agaaaagtcttttaaacaataattataccttaaaatctgtgactttttcttgtaaataagacgaaaatttttttttaaaattttct--tatttaggaccg 25377031  T
Q  596 aagggagtataat 608  Q
    |||||||||||||    
T  25377032 aagggagtataat 25377044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 404 - 582
Target Start/End: Original strand, 42312399 - 42312585
Alignment:
Q  404 tttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaa-------agacaaacattaaataaggggta 496  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||| ||||| |||  ||||||||||||       |||||||||| ||| || || ||    
T  42312399 tttgaatatttttacaaatataccctcataaaaaattgtgaagcataaaatatatcctctaatattaaaaaaaaaaaagacaaacataaaacaaaggata 42312498  T
Q  497 taaaagtcttttaaacaataactacatcttaaaaattgtga-tattttcttataaataggaccaacaaattttttgaaaattttctt 582  Q
     ||||||||||||| ||||||||| | ||||||| |||||| |||||| ||||||||| ||||||  ||||||||||| ||||||||    
T  42312499 gaaaagtcttttaagcaataactataccttaaaagttgtgattatttttttataaataagaccaaataattttttgaatattttctt 42312585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 398 - 559
Target Start/End: Original strand, 33721603 - 33721768
Alignment:
Q  398 taactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcga-ctaata---ttaaaaagacaaacattaaataaggg 493  Q
    ||||||||| ||||  |||||||| |||| ||||||||||||| |||| ||||||||||| | | ||||||   |||||| || ||||||||||  || |    
T  33721603 taactttttcaataattttacaaacatactctcataaaaaattgtgaaacattaaatacaccaaactaatactattaaaaggataaacattaaacgagag 33721702  T
Q  494 gtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggacca 559  Q
    ||| |||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  33721703 gtagaaaagtcttttaaacaataactacacattaaaaattgtgacattttcttataaataggacca 33721768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 385 - 553
Target Start/End: Original strand, 47231552 - 47231718
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacatt 484  Q
    |||||||||| ||||||||||||||||| ||||||| |||||| ||||||||| || |||| |||||||||||     |||||||| |||||||| ||||    
T  47231552 tcattaattaatgtaactttttgaatatttttacaattatacc-tcataaaaagttgtgaatcattaaatacacttgttaatattataaagacaa-catt 47231649  T
Q  485 aaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaata 553  Q
    ||||||| |||| |||| ||||||||||||||| || ||||||||| |  ||| |||||||||||||||    
T  47231650 aaataagaggtaaaaaaatcttttaaacaataaatatatcttaaaagtattgacattttcttataaata 47231718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 396 - 544
Target Start/End: Complemental strand, 30615274 - 30615129
Alignment:
Q  396 tgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggt 495  Q
    ||||||||||| ||||| |||||||||| ||| | ||||||||||||||| ||||||||||||| |||||||||||||||||||  ||||||| |  |      
T  30615274 tgtaactttttaaatatttttacaaatacacctttataaaaaattatgaaacattaaatacatctactaatattaaaaagacaactattaaatgaatg-- 30615177  T
Q  496 ataaaagtcttttaaacaataactacatcttaaaaattgtgatattttc 544  Q
    |||||| ||||||||  ||||| |||| ||||||| |||||||||||||    
T  30615176 ataaaaatcttttaagtaataattaca-cttaaaagttgtgatattttc 30615129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 396 - 585
Target Start/End: Complemental strand, 27032295 - 27032109
Alignment:
Q  396 tgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggt 495  Q
    ||||||||||| ||||| |||||||||||||||| ||| ||| || ||||  |||||||||||  ||||||||||||||  ||| ||||| || || |||    
T  27032295 tgtaactttttaaatat-tttacaaatatacccttatagaaagttgtgaaatattaaatacatttactaatattaaaaaagcaatcattacatgagaggt 27032197  T
Q  496 ataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttata 585  Q
    | | | ||||||||| |||| |  ||| ||||| ||||||||||||||| ||||||||| ||||| |||  | |||||||||||||||||    
T  27032196 agacaggtcttttaagcaattatcacaccttaagaattgtgatattttcctataaatagaaccaaaaaa--tattgaaaattttcttata 27032109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 466 - 573
Target Start/End: Original strand, 44884411 - 44884519
Alignment:
Q  466 tattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaa--ttgtgatattttcttataaataggaccaacaa 563  Q
    |||||||||| |||||||||||| |||| || ||||||||||||||||||||||||| ||||||||  |||||| ||||||||||| |||||||||| ||    
T  44884411 tattaaaaaggcaaacattaaatgagggata-aaaagtcttttaaacaataactacaccttaaaaaagttgtgacattttcttatatataggaccaaaaa 44884509  T
Q  564 attttttgaa 573  Q
     |||||||||    
T  44884510 cttttttgaa 44884519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 396 - 555
Target Start/End: Complemental strand, 16572407 - 16572251
Alignment:
Q  396 tgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggt 495  Q
    ||||||||||| || || |||| ||||||||| | ||| || ||| ||||  ||||||||||   |||||||||||||| |||  |||||||| |||| |    
T  16572407 tgtaactttttaaacatttttaaaaatataccattatagaatattgtgaaatattaaataca---actaatattaaaaatacagtcattaaatgagggat 16572311  T
Q  496 ataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaatagg 555  Q
    | |||| ||| |||| ||||||||||| ||||||| |||||| |||||||||||||||||    
T  16572310 aaaaaattctgttaagcaataactacaccttaaaagttgtgacattttcttataaatagg 16572251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 15496208 - 15496130
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaatattttttctaaaagggtcctatagtaaaggacggaggtagtac 332  Q
    ||||||||||||||| |||||||||||| ||||| | |||||||||||||||||||||| ||| ||||||||| |||||    
T  15496208 gaaaatatcaaaagggtcttataaaaagggacaatttttttttctaaaagggtcctataataagggacggagggagtac 15496130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 17781462 - 17781384
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaatatttttt-ctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    |||||||||||||||||||||||||||| ||||| | |||||| |||||||||||||||| ||| ||||||||||||||    
T  17781462 gaaaatatcaaaaggatcttataaaaagggacaattttttttttctaaaagggtcctataataagggacggaggtagta 17781384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 377 - 468
Target Start/End: Original strand, 32599730 - 32599820
Alignment:
Q  377 caatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatat 468  Q
    ||||||| ||||||||||||  |||||||| ||||  |||| ||||||||| |||||||||||| |||||||||||||||||| ||||||||    
T  32599730 caatacattcattaattagtaaaacttttt-aataattttataaatataccttcataaaaaattgtgaagcattaaatacatccactaatat 32599820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 626 - 750
Target Start/End: Original strand, 49743356 - 49743480
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagat 725  Q
    |||||||||||||||| | |||||| ||||| |||||||||||||||| ||||  | ||||||||  ||  | ||| |||||||| | |||||||||| |    
T  49743356 gtccccgcgagcatagttcagttggcagggatatgcattattatatgcaggggccgggattcgaaccccggacacctcacttatttaccttgaaaaaggt 49743455  T
Q  726 gaattctaaccaccaaactatttga 750  Q
    ||||| ||||||| |||||| ||||    
T  49743456 gaattttaaccactaaactacttga 49743480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 542 - 609
Target Start/End: Complemental strand, 42183366 - 42183299
Alignment:
Q  542 ttcttataaataggaccaacaaattttttgaaaattttcttatatttaggaccgaagggagtataata 609  Q
    |||||||||||||||||||||| |||||| ||||||||||||||| ||| |||| ||||| |||||||    
T  42183366 ttcttataaataggaccaacaatttttttcaaaattttcttatatatagaaccggagggaatataata 42183299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 467 - 557
Target Start/End: Complemental strand, 4960343 - 4960253
Alignment:
Q  467 attaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggac 557  Q
    ||||||| |||||||||||||| || |||||||||| ||||||| || |||| ||| |||||||||||| | | ||| |||||||||||||    
T  4960343 attaaaatgacaaacattaaatgagaggtataaaagacttttaagcattaacaacaccttaaaaattgtaacacttttttataaataggac 4960253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 461 - 602
Target Start/End: Complemental strand, 54864017 - 54863874
Alignment:
Q  461 actaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaa 560  Q
    ||||||||| ||||||  |||||||||| || | || ||||| |||||||||||||| |  | ||||||| ||||||  |||||||||||||||||||||    
T  54864017 actaatattgaaaagatcaacattaaatgagagttagaaaagccttttaaacaataaatgtaccttaaaagttgtgactttttcttataaataggaccaa 54863918  T
Q  561 --caaattttttgaaaattttcttatatttaggaccgaagggag 602  Q
          |||||||||||||||||||||  ||| |||| ||||||    
T  54863917 ttttttttttttgaaaattttcttataaatagaaccggagggag 54863874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 52575696 - 52575621
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaatattttttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    ||||||||||||||| |||||||||| | ||||| |  ||||||||||||||||||||| ||| ||||||||| ||||    
T  52575696 gaaaatatcaaaagggtcttataaaaggggacaatt--tttttctaaaagggtcctataataagggacggagggagta 52575621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 463 - 549
Target Start/End: Complemental strand, 56093682 - 56093596
Alignment:
Q  463 taatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttata 549  Q
    ||||||||||||||  ||||| |||||| || || |||||||||||||| ||||| |||| ||||||| || ||||||||| |||||    
T  56093682 taatattaaaaagattaacatcaaataatggataaaaaagtcttttaaataataattacaccttaaaagttatgatatttttttata 56093596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 18872792 - 18872717
Alignment:
Q  256 aaatatcaaaaggatcttataaaaagagacaaat-attttttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    |||||||||| ||||||||||||||| ||||||| |||||||| ||||||||| |||| | | ||||||||||||||    
T  18872792 aaatatcaaagggatcttataaaaagggacaaattattttttc-aaaagggtcttataattagggacggaggtagta 18872717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 19839911 - 19839990
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaatattttt--tctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    ||||||||||||||| ||||||||||||  |||| | |||||  ||||||||||||||||| ||| |||||||| |||||    
T  19839911 gaaaatatcaaaagggtcttataaaaaggaacaattttttttcttctaaaagggtcctataataagggacggagatagta 19839990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 377 - 457
Target Start/End: Original strand, 44720553 - 44720633
Alignment:
Q  377 caatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaataca 457  Q
    ||||||| ||||| |||| |||||| |||||||||| |||| ||||||| ||||||||||||||   || |||||||||||    
T  44720553 caatacaatcattgattaatgtaacattttgaatatttttataaatatatcctcataaaaaattgcaaaacattaaataca 44720633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 626 - 738
Target Start/End: Complemental strand, 49039546 - 49039434
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagat 725  Q
    ||||||| |||||||| | |||||| ||||||||||||| |||||||| |||  || | ||||||  ||  | |||||||||||| | |||||||||| |    
T  49039546 gtccccgtgagcatagctcagttggcagggacatgcattgttatatgcagggactggggttcgaaccccggacaccccacttattcaccttgaaaaaggt 49039447  T
Q  726 gaattctaaccac 738  Q
    |||||||| ||||    
T  49039446 gaattctagccac 49039434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 24177460 - 24177417
Alignment:
Q  291 ttttttctaaaagggtcctatagtaaaggacggaggtagtacct 334  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  24177460 ttttttctaaaagggtcttataataaaggacggaggtagtacct 24177417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 414 - 509
Target Start/End: Complemental strand, 25382490 - 25382395
Alignment:
Q  414 tttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtctttta 509  Q
    |||||||||||||||| || |||| || ||||| |||||| | |   ||||||| ||||||||| ||||||||||||||| || ||||||| ||||    
T  25382490 tttacaaatatacccttatgaaaatttgtgaagtattaaaaatactcactaatactaaaaagactaacattaaataagggctacaaaagtcattta 25382395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 17261422 - 17261344
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaatatttt-ttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    ||||||||||||||  |||||||||||||||||| | |||| |||||||| |||  |||| ||| ||||||||||||||    
T  17261422 gaaaatatcaaaagagtcttataaaaagagacaatttttttcttctaaaatggttttataataagggacggaggtagta 17261344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 24178019 - 24178095
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaatattttttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    ||||||||||||||| |||||||||||| |||| |  |||||||||||||||| ||||| ||| ||||| || |||||    
T  24178019 gaaaatatcaaaagg-tcttataaaaagggacacaatttttttctaaaagggttctataataagggacgaagatagta 24178095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 738
Target Start/End: Original strand, 27921893 - 27922002
Alignment:
Q  629 cccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaa 728  Q
    |||| |||||||| | |||||| |||||||||||||||||||||| ||||  | | ||||||  ||| | | | |||||||| ||||| |||||  ||||    
T  27921893 cccgtgagcatagctcagttggtagggacatgcattattatatgcaggggccggggttcgaaccccagacatctcacttattcatcttaaaaaatgtgaa 27921992  T
Q  729 ttctaaccac 738  Q
    ||||||||||    
T  27921993 ttctaaccac 27922002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 626 - 738
Target Start/End: Complemental strand, 21023452 - 21023341
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagat 725  Q
    |||||||||| ||||| | |||||| ||  ||||||||| |||||| ||||| ||| | ||||||  ||  | |||||||||||| | |||||||||| |    
T  21023452 gtccccgcgatcatagctcagttggcagaaacatgcattgttatatccgggg-ttggggttcgaacccccgacaccccacttattcaccttgaaaaaggt 21023354  T
Q  726 gaattctaaccac 738  Q
    |||||||||||||    
T  21023353 gaattctaaccac 21023341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 461 - 553
Target Start/End: Complemental strand, 21128189 - 21128097
Alignment:
Q  461 actaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaata 553  Q
    |||||||| ||||||| |||||| |||| |||| |  |||||||||||||| ||||| || |  |||||| || ||| |||||||||||||||    
T  21128189 actaatataaaaaagataaacataaaatgagggttggaaaagtcttttaaaaaataaatatacattaaaagttatgacattttcttataaata 21128097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 652 - 732
Target Start/End: Original strand, 36045850 - 36045930
Alignment:
Q  652 agggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattct 732  Q
    ||||||||||||| |||||||| ||||||| |||||||| |||  | ||| |||||| | || ||||||||| ||||||||    
T  36045850 agggacatgcattgttatatgcaggggttgagattcgaactccggacacctcacttagtcatattgaaaaaggtgaattct 36045930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 626 - 678
Target Start/End: Complemental strand, 41492599 - 41492547
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggacatgcattattatatgcggggg 678  Q
    ||||||| |||||||| | |||||| |||||||||||||||||||||| ||||    
T  41492599 gtccccgtgagcatagctcagttggcagggacatgcattattatatgcagggg 41492547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 331
Target Start/End: Original strand, 7698435 - 7698506
Alignment:
Q  261 tcaaaaggatcttataaaaagagacaaa-tattttttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    |||||||| |||||||||||| |||||| ||||||||  ||||||||| |||| | | ||||||||||||||    
T  7698435 tcaaaagggtcttataaaaagggacaaattatttttttcaaaagggtcttataattagggacggaggtagta 7698506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 628 - 690
Target Start/End: Original strand, 9062172 - 9062234
Alignment:
Q  628 ccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaa 690  Q
    ||||| |||||||| | |||||| ||||||||||||||||||||||  |||||| | ||||||    
T  9062172 ccccgtgagcatagtttagttggcagggacatgcattattatatgcaagggttggggttcgaa 9062234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 385 - 459
Target Start/End: Original strand, 27184255 - 27184329
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatc 459  Q
    |||||||||| |  |||||||||||||| |||| ||||| ||| |||| |||| || ||||| ||||||||||||    
T  27184255 tcattaattaatccaactttttgaatatctttaaaaataaaccatcattaaaatttgtgaagtattaaatacatc 27184329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 414 - 479
Target Start/End: Complemental strand, 42183601 - 42183535
Alignment:
Q  414 tttacaaatataccctcataa-aaaattatgaagcattaaatacatcgactaatattaaaaagacaa 479  Q
    |||||||||||| |||||||| |||||| |||||||||||||| |   | |||||||||||||||||    
T  42183601 tttacaaatatatcctcataaaaaaattgtgaagcattaaataaacacattaatattaaaaagacaa 42183535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 530
Target Start/End: Original strand, 40414163 - 40414200
Alignment:
Q  493 ggtataaaagtcttttaaacaataactacatcttaaaa 530  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  40414163 ggtagaaaagtcttttaaacaataactacaccttaaaa 40414200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 722
Target Start/End: Original strand, 42432021 - 42432098
Alignment:
Q  645 agttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaa 722  Q
    |||||| ||||||||||||| |||||||| ||| ||| | |||||| ||| || |||| ||||||| |||||| ||||    
T  42432021 agttggcagggacatgcattgttatatgcagggattggggttcgaactccgaacaccctacttatttatcttgtaaaa 42432098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 1e-55; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 451 - 605
Target Start/End: Original strand, 32211834 - 32211988
Alignment:
Q  451 aaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataa 550  Q
    ||||||| | |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  32211834 aaatacacccactaatattaaaaagacaaacattaaataacgggtagaaaagtcttttaaacaataactacaccttaaaagttgtgaaattttcttataa 32211933  T
Q  551 ataggaccaacaaattttttgaaaattttcttatatttaggaccgaagggagtat 605  Q
    ||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  32211934 ataagaccaacaatttttttgaaaattttcttatatataggaccggagggagtat 32211988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 376 - 605
Target Start/End: Complemental strand, 45261539 - 45261313
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    ||||| || ||||| |||| |||||||||||||| || ||||||||||||||||||  ||||||| |||| ||||||||||| | ||||||||| |||||    
T  45261539 ccaatgcattcattgattaatgtaactttttgaacatttttacaaatataccctca--aaaaattgtgaaacattaaatacacccactaatatttaaaag 45261442  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaa 575  Q
    | |||||||||||| ||| || ||||||| ||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||   ||||||||    
T  45261441 agaaacattaaata-gggatagaaaagtcatttaagcaataactacagcttaaaagttgtgacattttcttataaataggaccaaaaaaaaatttgaaaa 45261343  T
Q  576 ttttcttatatttaggaccgaagggagtat 605  Q
    |||||||||||| ||||||| |||||||||    
T  45261342 ttttcttatattaaggaccggagggagtat 45261313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 376 - 605
Target Start/End: Original strand, 40344902 - 40345129
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    ||||| || ||||| |||| || |||||||||||||| |||||||||||||||| |||||||||| |||| |||||||||| || |||||||||||||||    
T  40344902 ccaatgcagtcattgattattgcaactttttgaatatttttacaaatatacccttataaaaaattgtgaaccattaaatac-tc-actaatattaaaaag 40344999  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaa 575  Q
    ||||| ||||||| |||||||||||||||| |||| |||| |||||| ||||||| |||||| ||||||||||| |||||| ||| |||    ||||| |    
T  40345000 acaaatattaaatgaggggtataaaagtctcttaagcaatgactacaccttaaaagttgtgacattttcttatagataggaacaaaaaaaaaattgaaca 40345099  T
Q  576 ttttcttatatttaggaccgaagggagtat 605  Q
    |||||||||| | ||||||| |||| ||||    
T  40345100 ttttcttataataaggaccggagggtgtat 40345129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 385 - 605
Target Start/End: Original strand, 17003556 - 17003775
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacatt 484  Q
    ||||| |||| ||||||||||||||||| ||||||||||||||||||| ||||||| |||| ||||||| ||| | ||||||||| |||||| |||||||    
T  17003556 tcattgattaatgtaactttttgaatatttttacaaatataccctcat-aaaaattgtgaaacattaaacacacccactaatatttaaaagagaaacatt 17003654  T
Q  485 aaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgata-ttttcttataaataggaccaacaaattttttgaaaattttctta 583  Q
    |||| |||| || ||||||| ||||| ||||||||||| ||||||| |||||| | |||| |||||||||||||||     |||||||||||||||||||    
T  17003655 aaat-agggataaaaaagtcatttaagcaataactacaccttaaaagttgtgacattttttttataaataggaccagatttttttttgaaaattttctta 17003753  T
Q  584 tatttaggaccgaagggagtat 605  Q
    |||| | |||||||| ||||||    
T  17003754 tattaaagaccgaagagagtat 17003775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 386 - 592
Target Start/End: Original strand, 46918443 - 46918648
Alignment:
Q  386 cattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacatta 485  Q
    ||||||||  ||||| ||||| || || |||||||||||||||| ||| || ||| |||| ||||||||||||  | |||||||||||||||| ||||||    
T  46918443 cattaattgttgtaaatttttaaacatttttacaaatatacccttatagaatattttgaaacattaaatacattcattaatattaaaaagacagacatta 46918542  T
Q  486 aataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttata 585  Q
    ||| | || || ||||||||||||| |||||||||   |||||||||||||| |||||||||||||||||||||| |  |||||| ||||||||||||||    
T  46918543 aatgaaggataaaaaagtcttttaagcaataacta-tccttaaaaattgtgacattttcttataaataggaccaaaactttttttaaaaattttcttata 46918641  T
Q  586 tttagga 592  Q
    || ||||    
T  46918642 ttaagga 46918648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 397 - 606
Target Start/End: Complemental strand, 35455461 - 35455256
Alignment:
Q  397 gtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggta 496  Q
    |||||||||||||||| | |||||||||||  |||||||||||| |||| |||||||||||   ||||||||| |||  | |||||||||||| ||| ||    
T  35455461 gtaactttttgaatatttctacaaatatac--tcataaaaaattgtgaaacattaaatacactcactaatatttaaat-ataaacattaaata-gggata 35455366  T
Q  497 taaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatatttaggaccga 596  Q
     ||||||| ||||| |||||| |||| ||||||| |||||| ||||||||||||||| ||||||    ||||||||||||||||||||||| ||||| |     
T  35455365 gaaaagtcatttaagcaataattacaccttaaaagttgtgacattttcttataaataagaccaattttttttttgaaaattttcttatattaaggactgt 35455266  T
Q  597 agggagtata 606  Q
    ||||||||||    
T  35455265 agggagtata 35455256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 396 - 585
Target Start/End: Original strand, 30041296 - 30041484
Alignment:
Q  396 tgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggt 495  Q
    ||||| ||||||||| | |||| ||||||||||||||||| | || ||||| |||||||| | | |||||||||||||||||||||||||| |||||| |    
T  30041296 tgtaattttttgaatgtttttataaatataccctcataaagatttgtgaagtattaaatataaccactaatattaaaaagacaaacattaattaagggtt 30041395  T
Q  496 ataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttata 585  Q
    | |||||||||||||||||||| || | ||| ||| |||| |  |||||| ||| || ||||||| ||| ||||||||||||||||||||    
T  30041396 agaaaagtcttttaaacaataaatatacctt-aaagttgtcactttttctaatatattggaccaaaaaaatttttgaaaattttcttata 30041484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 398 - 585
Target Start/End: Original strand, 43320129 - 43320310
Alignment:
Q  398 taactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtat 497  Q
    ||||||||||||||| |||||||||| ||||| |||||||||   ||||||||||||||||  |||||      ||||||||||||| |||| ||| ||     
T  43320129 taactttttgaatatttttacaaatacacccttataaaaaatcgcgaagcattaaatacattcactaa------aaagacaaacattgaataggggctag 43320222  T
Q  498 aaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttata 585  Q
    ||||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||||| ||||    ||||||||||||||| |||||    
T  43320223 aaaagtcttttaaacaataaccacaccttaaaagttgtgacattttcttataaataggtccaaacttttttttgaaaattttattata 43320310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 376 - 557
Target Start/End: Complemental strand, 28695724 - 28695539
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatat--accctcataaaaaattatgaagcattaaatacatcgactaatattaaaa 473  Q
    |||||| | |||||||||||||||||||||||||||| |||||||||||  || || ||||||| || |||| ||||||  |||   |||||||||||||    
T  28695724 ccaatataatcattaattagtgtaactttttgaatatttttacaaatatacacgcttataaaaagttgtgaaacattaaccacagttactaatattaaaa 28695625  T
Q  474 agacaaacattaaataaggggt--ataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggac 557  Q
    | | |||| |||||||| ||||  | |||||||||| ||| ||||||||||  |||||| ||||||||||||||||||| ||||||    
T  28695624 acaaaaacgttaaataaagggtaaaaaaaagtctttaaaataataactacacgttaaaatttgtgatattttcttataattaggac 28695539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 399 - 585
Target Start/End: Original strand, 8825352 - 8825535
Alignment:
Q  399 aactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtata 498  Q
    |||||||| ||||| |||| ||||||||||| |||||||||| || |||||||||||||   | |||||||||||  | |  |||||||| | || || |    
T  8825352 aactttttaaatatttttataaatatacccttataaaaaattgtgtagcattaaatacactcattaatattaaaataa-agtcattaaatgaaggataga 8825450  T
Q  499 aaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttata 585  Q
    |||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||    |||||||||||||||||||||    
T  8825451 aaagtcttttaagcaataactacaccttaaaa-ttgtgacattttcttataaataggaccaa-tttttttttgaaaattttcttata 8825535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 48921746 - 48921668
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaatattttttctaaaagggtcctatagtaaaggacggaggtagtac 332  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  48921746 gaaaatatcaaaagggtcttataaaaagagacaaatattttttctaaaagggtcctataataagggacggaggtagtac 48921668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 492 - 602
Target Start/End: Complemental strand, 27721439 - 27721330
Alignment:
Q  492 gggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatatttagg 591  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||| ||||||||||||||||||| || || |||||||||  |||||||||||  |||    
T  27721439 gggtataaaagtcttttaaacaataacaaca-cataaaaattgtgacattttcttataaataggacaaaaaatttttttgaactttttcttatataaagg 27721341  T
Q  592 accgaagggag 602  Q
    |||| ||||||    
T  27721340 accggagggag 27721330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 377 - 530
Target Start/End: Complemental strand, 36659361 - 36659210
Alignment:
Q  377 caatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaaga 476  Q
    ||||||| || ||||||| ||||||||||||||||| ||||||| |||||||| ||||||||||||||| |||||||||||   | ||| ||||||||      
T  36659361 caatacaatcgttaattaatgtaactttttgaatatttttacaagtataccctaataaaaaattatgaaacattaaatacactcattaacattaaaaa-- 36659264  T
Q  477 caaac-attaaataaggggtataaaagtcttttaaacaataactacatcttaaaa 530  Q
     |||| |||||||| ||| || |||||||| |||| || |||||||| |||||||    
T  36659263 -aaactattaaataggggataaaaaagtctcttaagcagtaactacaccttaaaa 36659210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 506 - 586
Target Start/End: Original strand, 18085649 - 18085729
Alignment:
Q  506 tttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttt-tgaaaattttcttatat 586  Q
    |||||| |||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  18085649 tttaaataataactacaccttaaaa-ttgtgatattttcttataaataggaacaacaaatttttctgaaaattttcttatat 18085729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 436 - 552
Target Start/End: Original strand, 25295082 - 25295198
Alignment:
Q  436 aaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgt 535  Q
    ||||| |||| |||| |||| | | |||||||||||||||| || |||||||| |||| || |||||||||||||||||||| |||| ||||||| ||||    
T  25295082 aaattgtgaaacatttaataaacccactaatattaaaaagagaagcattaaatgagggataaaaaagtcttttaaacaataattacaccttaaaagttgt 25295181  T
Q  536 gatattttcttataaat 552  Q
     | ||||||||||||||    
T  25295182 aacattttcttataaat 25295198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 16869537 - 16869615
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaa-agagacaaatattttttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    ||||||||||||||| |||||||||| |||||||||| | |||||||||||||||||||| ||| ||||||||||||||    
T  16869537 gaaaatatcaaaagggtcttataaaaaagagacaaatttgttttctaaaagggtcctataataagggacggaggtagta 16869615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 464 - 549
Target Start/End: Complemental strand, 49983646 - 49983561
Alignment:
Q  464 aatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttata 549  Q
    ||||||||||||||||||||||||| |||| || |||||||||||||||||||| |  ||||||||| ||||||  ||||||||||    
T  49983646 aatattaaaaagacaaacattaaatgagggttagaaaagtcttttaaacaataaatgtatcttaaaagttgtgactttttcttata 49983561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 645 - 733
Target Start/End: Complemental strand, 34407172 - 34407084
Alignment:
Q  645 agttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattcta 733  Q
    |||||| |||||||||||||||||||||| ||||||| | ||||||  ||| | |||||||||||| |||||||||| |||||||||||    
T  34407172 agttggcagggacatgcattattatatgcaggggttggggttcgaaccccagacaccccacttattcatcttgaaaatgatgaattcta 34407084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 402 - 586
Target Start/End: Original strand, 52596622 - 52596808
Alignment:
Q  402 tttttgaatatgtttacaaatataccctcat-aaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaa 500  Q
    ||||||||||| ||||| |||||||| |||| |||||||| ||||| |||  ||| ||| ||||| | ||||| |||||||||||||||| ||||| |||    
T  52596622 tttttgaatatttttacgaatataccatcataaaaaaattgtgaagtatttgatatatccactaaaactaaaaggacaaacattaaataa-gggtagaaa 52596720  T
Q  501 agtcttttaaacaataactacatcttaaaaattgtgatattttcttat--aaataggaccaacaaattttttgaaaattttcttatat 586  Q
      | ||||||  ||||||| || ||||||| |||| ||||||| ||||  ||||| ||||||  |||| ||| |||||||||||||||    
T  52596721 ttttttttaagtaataactgcaccttaaaagttgtaatatttttttataaaaataagaccaaataattcttttaaaattttcttatat 52596808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 377 - 560
Target Start/End: Complemental strand, 55452607 - 55452423
Alignment:
Q  377 caatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaata-ttaaaaag 475  Q
    ||||||| | |||||||| ||||||||||| |||   ||| |||||||||  ||||||||| || |||  ||||||||||| | ||||||| ||||||||    
T  55452607 caatacaattattaattattgtaacttttttaattcttttgcaaatatac--tcataaaaa-ttgtgagtcattaaatacacctactaatacttaaaaag 55452511  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataa---ctacatcttaaaaattgtgatattttcttataaataggaccaa 560  Q
    ||| | ||||| | |||| || |||| |||||||| ||||||   |||||| |||||| |||||| ||||||||||||||| ||||||    
T  55452510 acagatattaattgagggatagaaaaatcttttaagcaataaaaactacattttaaaagttgtgacattttcttataaataagaccaa 55452423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 1330967 - 1331043
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaatattttttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    ||||||||||||||| |||||||||||| ||||| | |||||||||||||||||||||| |||  |||||||||||||    
T  1330967 gaaaatatcaaaagggtcttataaaaagggacaatt-ttttttctaaaagggtcctataataatagacggaggtagta 1331043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 586
Target Start/End: Complemental strand, 2564478 - 2564419
Alignment:
Q  527 aaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatat 586  Q
    |||| ||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||    
T  2564478 aaaatttgtgatattttcttataattaggaccaaaaaatattttgaaaattttcttatat 2564419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 463 - 553
Target Start/End: Original strand, 25286165 - 25286256
Alignment:
Q  463 taatattaaaaagacaaacattaaataaggggt-ataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaata 553  Q
    |||||||||||||||||||||||||| |||||| | |||| |||||||||  ||||||| |  ||||||||| ||| |||||||||||||||    
T  25286165 taatattaaaaagacaaacattaaattaggggtaagaaaattcttttaaaatataactaaactttaaaaattttgaaattttcttataaata 25286256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 461 - 560
Target Start/End: Complemental strand, 41560080 - 41559981
Alignment:
Q  461 actaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaa 560  Q
    |||||||||| ||||||||||||||||| || | || ||||||||||||||  |||| |  |||||||||||| |||| |||||||||| || |||||||    
T  41560080 actaatattagaaagacaaacattaaatgagagttaaaaaagtcttttaaatcataaatgtatcttaaaaattatgattttttcttatatattggaccaa 41559981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 414 - 480
Target Start/End: Complemental strand, 49983848 - 49983782
Alignment:
Q  414 tttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaa 480  Q
    |||||||||||||||||||||||| || ||||| |||||||| | | ||||||||||||||||||||    
T  49983848 tttacaaatataccctcataaaaatttgtgaagtattaaatatacccactaatattaaaaagacaaa 49983782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 478 - 539
Target Start/End: Original strand, 21698510 - 21698571
Alignment:
Q  478 aaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgata 539  Q
    |||||||||||| |||||| |||| |||||||||||||| ||||||||||||| ||||||||    
T  21698510 aaacattaaatatggggtagaaaaatcttttaaacaatatctacatcttaaaagttgtgata 21698571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 396 - 517
Target Start/End: Complemental strand, 30577946 - 30577825
Alignment:
Q  396 tgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggt 495  Q
    ||||| ||||| ||| | |||||||||||||| |||||||||    ||||| |||||||| ||| |||||| || ||||||| |||||||||| |||| |    
T  30577946 tgtaattttttaaatgtttttacaaatataccatcataaaaatgagtgaagtattaaatatatctactaatgttgaaaagaccaacattaaatgagggat 30577847  T
Q  496 ataaaagtcttttaaacaataa 517  Q
    | ||| |||||||||| |||||    
T  30577846 agaaacgtcttttaaataataa 30577825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 385 - 476
Target Start/End: Complemental strand, 22923800 - 22923709
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaaga 476  Q
    |||||||||  |||||||||||  |||| |||||||||||||| ||||||||| || ||| | |||||||| | | ||||||||||||||||    
T  22923800 tcattaattgttgtaactttttatatatttttacaaatataccttcataaaaatttgtgatgtattaaatatacctactaatattaaaaaga 22923709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 402 - 493
Target Start/End: Original strand, 43105143 - 43105234
Alignment:
Q  402 tttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggg 493  Q
    ||||||||| | |||||||||||||||||||||||| || ||||| || ||||| | | ||||||||| ||||||  |||||||||| ||||    
T  43105143 tttttgaatgtttttacaaatataccctcataaaaatttgtgaagtatcaaatatacccactaatattgaaaagatcaacattaaatgaggg 43105234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 455
Target Start/End: Original strand, 42279227 - 42279285
Alignment:
Q  397 gtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaata 455  Q
    |||||||||| ||||| |||||||||||||||||||||||| |||||||  ||||||||    
T  42279227 gtaacttttttaatatttttacaaatataccctcataaaaatttatgaaatattaaata 42279285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 553
Target Start/End: Original strand, 50452285 - 50452438
Alignment:
Q  397 gtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaat-acatcgactaatattaaaaagacaaacattaaataaggggt 495  Q
    |||||||||| ||||| |||||||||||| | | |||||||| ||  || |||||||| ||||||  ||||||||||| || | |  ||||||||||| |    
T  50452285 gtaactttttaaatatttttacaaatatatctttataaaaaaata--aaacattaaattacatcgt-taatattaaaa-gatagaagttaaataagggat 50452380  T
Q  496 ataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaata 553  Q
    | |  ||||||||||||||||  || | |||||||||| |||||||||||||||||||    
T  50452381 acacgagtcttttaaacaatagttataccttaaaaattatgatattttcttataaata 50452438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 403 - 560
Target Start/End: Original strand, 48271745 - 48271901
Alignment:
Q  403 ttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaag 502  Q
    |||||||||| | |||||||||||||||||  ||| || ||||||||||||| ||   |||||||||||||||  | |  |||||  |||| ||  || |    
T  48271745 ttttgaatatttatacaaatataccctcatggaaagttttgaagcattaaatgcacatactaatattaaaaag-gacatgttaaaggagggataggaagg 48271843  T
Q  503 tcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaa 560  Q
    |||||||| |||||| | ||| ||| || |||||| ||||||||||||||| ||||||    
T  48271844 tcttttaagcaataatttcattttagaagttgtgacattttcttataaatatgaccaa 48271901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 652 - 736
Target Start/End: Complemental strand, 4045709 - 4045625
Alignment:
Q  652 agggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattctaacc 736  Q
    ||||||||||||| |||||||| ||||| | | |||||| | |  | |||||||||||| |||||||||||| ||||||||||||    
T  4045709 agggacatgcattgttatatgcaggggtcgaggttcgaacttcggacaccccacttattcatcttgaaaaaggtgaattctaacc 4045625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 10284611 - 10284691
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaatattt---tttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    ||||||||||||||| |||||||||||| ||||| | |||   || |||||||||||||||| ||| ||||||||| ||||    
T  10284611 gaaaatatcaaaagggtcttataaaaagggacaattttttttcttcctaaaagggtcctataataagggacggagggagta 10284691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 332
Target Start/End: Original strand, 42044220 - 42044290
Alignment:
Q  262 caaaaggatcttataaaaagagacaaatattttttctaaaagggtcctatagtaaaggacggaggtagtac 332  Q
    ||||| ||||||||||||||||||||||  ||||| ||||||| || |||| | | |||||||||||||||    
T  42044220 caaaaagatcttataaaaagagacaaattatttttttaaaaggatcttataattagggacggaggtagtac 42044290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 385 - 438
Target Start/End: Complemental strand, 47860756 - 47860703
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaa 438  Q
    |||||||||| |||||||||||  |||| ||||| |||||||||||||||||||    
T  47860756 tcattaattaatgtaactttttagatatttttactaatataccctcataaaaaa 47860703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 463 - 528
Target Start/End: Complemental strand, 49787835 - 49787770
Alignment:
Q  463 taatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaa 528  Q
    |||| |||||| |||||||||||||  |||| ||||||||| ||||||||||||| || |||||||    
T  49787835 taattttaaaaggacaaacattaaacgagggttataaaagtattttaaacaataaatatatcttaa 49787770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 256 - 332
Target Start/End: Original strand, 15996735 - 15996811
Alignment:
Q  256 aaatatcaaaaggatcttataaaaagagacaaatattttttctaaaagggtcctatagtaaaggacggaggtagtac 332  Q
    ||||| |||| || |||||||||||| ||||||| ||||||  ||||||||| |||| | | |||||||||||||||    
T  15996735 aaatagcaaaggggtcttataaaaagggacaaatttttttttcaaaagggtcttataattagggacggaggtagtac 15996811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 414 - 557
Target Start/End: Complemental strand, 24650261 - 24650120
Alignment:
Q  414 tttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaaca 513  Q
    |||||||||||||  | |||||||||| ||||  ||||||||     |||||||||||||||||||| ||||||  | || || |||||| |||| ||||    
T  24650261 tttacaaatatacttttataaaaaattgtgaaatattaaatatgctcactaatattaaaaagacaaaaattaaaagaaggttaaaaaagtttttttaaca 24650162  T
Q  514 ataactacatcttaaaaattgtgatattttcttataaataggac 557  Q
    |||| || | ||||||| ||||   ||||| |||||||||||||    
T  24650161 ataaatataccttaaaagttgt--aatttttttataaataggac 24650120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 376 - 452
Target Start/End: Original strand, 25294828 - 25294904
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaa 452  Q
    |||||||| |||||||||| || |||| ||| ||||| |||| ||| |||| ||||||||||||| |||| ||||||    
T  25294828 ccaatacaatcattaattaatgaaactatttaaatatttttataaacatactctcataaaaaattgtgaaacattaa 25294904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 30819953 - 30819878
Alignment:
Q  256 aaatatcaaaaggatcttataaaaagagacaaatattttttct-aaaagggtcctatagtaaaggacggaggtagta 331  Q
    |||||||||| || |||||||||||| ||||| | |||||||| ||||||||| |||||| | ||||||||||||||    
T  30819953 aaatatcaaaggggtcttataaaaagggacaatt-ttttttctcaaaagggtcttatagttagggacggaggtagta 30819878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 38670789 - 38670829
Alignment:
Q  291 ttttttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    |||||||||||||||||||||| ||| ||||||||||||||    
T  38670789 ttttttctaaaagggtcctataataagggacggaggtagta 38670829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 48904225 - 48904300
Alignment:
Q  256 aaatatcaaaaggatcttataaaaagagacaaatattttttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    ||||| ||||||  |||||||||||| |||||||  ||||| |||||||||| |||| | | ||||||||||||||    
T  48904225 aaataccaaaagagtcttataaaaagggacaaattatttttttaaaagggtcttataattagggacggaggtagta 48904300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 12918798 - 12918875
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaa-tattttttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    ||||||| |||||||||||||||||||| |||||| ||||||||| || |||||| |||| | | ||| ||||||||||    
T  12918798 gaaaataccaaaaggatcttataaaaagggacaaattattttttc-aagagggtcttataattagggatggaggtagta 12918875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 15095275 - 15095198
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaatattttttct-aaaagggtcctatagtaaaggacggaggtagta 331  Q
    |||||||||||| ||||||||||||||| ||||| | |||||||| ||||||||  |||| | | ||||||||||||||    
T  15095275 gaaaatatcaaagggatcttataaaaagggacaatt-ttttttctcaaaagggttttataattagggacggaggtagta 15095198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 254 - 288
Target Start/End: Complemental strand, 29383091 - 29383057
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaa 288  Q
    |||||||||||| ||||||||||||||||||||||    
T  29383091 gaaaatatcaaagggatcttataaaaagagacaaa 29383057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 254 - 288
Target Start/End: Complemental strand, 35938442 - 35938408
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaa 288  Q
    |||||||||||||| ||||||||||||||||||||    
T  35938442 gaaaatatcaaaagaatcttataaaaagagacaaa 35938408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 483 - 553
Target Start/End: Original strand, 43105935 - 43106004
Alignment:
Q  483 ttaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaata 553  Q
    |||||| |||| || |||||||||||||||||||| || | ||||||| ||||||  ||||||||||||||    
T  43105935 ttaaatgagggttagaaaagtcttttaaacaataaata-accttaaaagttgtgactttttcttataaata 43106004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 451 - 553
Target Start/End: Complemental strand, 47860703 - 47860601
Alignment:
Q  451 aaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataa 550  Q
    ||||||| | ||||| |||||||||| ||  ||||||| | || || ||| |||||||||  |||||||| | |||||||  ||||| ||||||||||||    
T  47860703 aaatacacccactaagattaaaaagagaataattaaatgaaggataaaaatgtcttttaagtaataactataccttaaaagatgtgacattttcttataa 47860604  T
Q  551 ata 553  Q
    |||    
T  47860603 ata 47860601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 750
Target Start/End: Complemental strand, 6054267 - 6054202
Alignment:
Q  685 ttcgaattccaaataccccacttattaatcttgaaaaagatgaattctaaccaccaaactatttga 750  Q
    |||||| ||| || ||| |||||||| | |||||||||| |||||||||||||| | |||||||||    
T  6054267 ttcgaactccgaacacctcacttattcaccttgaaaaaggtgaattctaaccactagactatttga 6054202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 679
Target Start/End: Original strand, 12236593 - 12236646
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggt 679  Q
    ||||||| |||| ||| | |||||| |||||||||||||||||||||| |||||    
T  12236593 gtccccgtgagcgtagctcagttggcagggacatgcattattatatgcaggggt 12236646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 256 - 332
Target Start/End: Original strand, 16776849 - 16776925
Alignment:
Q  256 aaatatcaaaaggatcttataaaaagagacaaatattttttct-aaaagggtcctatagtaaaggacggaggtagtac 332  Q
    ||||| |||| || |||||||||||||||| ||| |||||||| |||||| ||||||| | | |||||||||||||||    
T  16776849 aaatagcaaaggggtcttataaaaagagac-aattttttttctcaaaaggatcctataattagggacggaggtagtac 16776925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 617 - 678
Target Start/End: Complemental strand, 16874300 - 16874239
Alignment:
Q  617 taatcaatcgtccccgcgagcatagatgagttggaagggacatgcattattatatgcggggg 678  Q
    |||||||  ||||||| |||||||| | |||||| ||||||||||||| |||||||| ||||    
T  16874300 taatcaaatgtccccgtgagcatagctcagttggcagggacatgcattgttatatgcagggg 16874239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 656 - 737
Target Start/End: Original strand, 28951890 - 28951971
Alignment:
Q  656 acatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattctaacca 737  Q
    |||||||||||||||||| |||||   | ||||||  || || |||||||||||| | |||||||||  |||||||||||||    
T  28951890 acatgcattattatatgcaggggtcagggttcgaaccccgaacaccccacttattcaccttgaaaaatgtgaattctaacca 28951971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 9e-54; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 387 - 586
Target Start/End: Complemental strand, 18705166 - 18704967
Alignment:
Q  387 attaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaa 486  Q
    |||||||||||||||||||||||||| |||||||||||| ||| ||||||| || |||||||||||||||| | | |||||||||||| | |||||||||    
T  18705166 attaattagtgtaactttttgaatatttttacaaatatatccttataaaaagttgtgaagcattaaatacacctattaatattaaaaacaaaaacattaa 18705067  T
Q  487 ataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatat 586  Q
    |||| ||||| |||||||||||||  |||||||||| ||||||| || |||| ||||||||||| | |||||||  | ||||||||||||||||||||||    
T  18705066 ataaagggtaaaaaagtcttttaagtaataactacaccttaaaagttatgatgttttcttataatttggaccaaagatttttttgaaaattttcttatat 18704967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 376 - 586
Target Start/End: Complemental strand, 6688967 - 6688755
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    ||||| || ||||||||||||||||||||||| |||   |||||||||||||||||||||||||| | ||||||||||||||   ||||||||   |||     
T  6688967 ccaatgcaatcattaattagtgtaactttttgcatactattacaaatataccctcataaaaaattgtaaagcattaaatacacttactaatatattaaaa 6688868  T
Q  476 acaaacat--taaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaa 573  Q
    ||||||||  |||||||||| || ||||||||||||||||||||||||| ||||||| ||||||||||||||||||  ||||||||  | ||||||||||    
T  6688867 acaaacatattaaataagggatagaaaagtcttttaaacaataactacaccttaaaagttgtgatattttcttatatttaggaccataatattttttgaa 6688768  T
Q  574 aattttcttatat 586  Q
    |||||||||||||    
T  6688767 aattttcttatat 6688755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 387 - 607
Target Start/End: Original strand, 3629190 - 3629410
Alignment:
Q  387 attaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaa 486  Q
    |||||||  ||||||||||| || || |||||||||||| ||| ||| ||  || |||| ||||||||||||  |||||||||||||| |||  ||||||    
T  3629190 attaattgttgtaactttttaaacatttttacaaatataaccttatagaatgttgtgaaacattaaatacattcactaatattaaaaatacagtcattaa 3629289  T
Q  487 ataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatat 586  Q
    || |||| || |||||||||||||  |||||||||| ||||||| |||||| |||||||||||||| |||| || |  |||||| |||||||||||||||    
T  3629290 attagggatacaaaagtcttttaagtaataactacaccttaaaagttgtgacattttcttataaattggacaaaaactttttttaaaaattttcttatat 3629389  T
Q  587 ttaggaccgaagggagtataa 607  Q
    | | ||||| |||||||||||    
T  3629390 taaagaccggagggagtataa 3629410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 398 - 585
Target Start/End: Original strand, 11691051 - 11691236
Alignment:
Q  398 taactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtat 497  Q
    ||||||||||||||| |||||||||| | |||||||||| ||||||||  ||||||||||   ||||| |||||||||| ||||||||||| ||||  ||    
T  11691051 taactttttgaatatttttacaaatacatcctcataaaatattatgaaatattaaatacactcactaagattaaaaagagaaacattaaatgaggg--at 11691148  T
Q  498 aaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttata 585  Q
    | |||||||||||  |||||||||| || |||||||| || ||||  ||||||||||||||||   ||||||||||||||||||||||    
T  11691149 agaagtcttttaagaaataactacacctaaaaaattgcgacatttgtttataaataggaccaatttattttttgaaaattttcttata 11691236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 378 - 548
Target Start/End: Complemental strand, 2225756 - 2225586
Alignment:
Q  378 aatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagac 477  Q
    |||||| | |||||||||||||||||||  ||||| |||||||||||||| ||||||||| || |||| ||||||||||| | |||||||||||||| |     
T  2225756 aatacaattattaattagtgtaacttttgaaatatttttacaaatataccttcataaaaagttgtgaaacattaaatacaaccactaatattaaaaacaa 2225657  T
Q  478 aaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttat 548  Q
    |||||||||||||  |||| |||||||||||||||||| |   || ||||||  ||||||| |||||||||    
T  2225656 aaacattaaataaatggtagaaaagtcttttaaacaatcatgtcaccttaaatgttgtgatgttttcttat 2225586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 397 - 530
Target Start/End: Original strand, 11983573 - 11983705
Alignment:
Q  397 gtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggta 496  Q
    |||||||||||||||  ||||||||||||| ||  |||||| || |||| ||||||||||||| |||||||||||||||| ||||||||||| |||||||    
T  11983573 gtaactttttgaatacttttacaaatatactcttgtaaaaa-ttgtgaaacattaaatacatccactaatattaaaaagagaaacattaaatgaggggta 11983671  T
Q  497 taaaagtcttttaaacaataactacatcttaaaa 530  Q
     |||| ||||||||||||||| |||| |||||||    
T  11983672 aaaaaatcttttaaacaataattacaccttaaaa 11983705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 447 - 551
Target Start/End: Original strand, 3257250 - 3257354
Alignment:
Q  447 cattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttctt 546  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| | || |||||||||||||||||||  |||  ||||||| |||||||||||||||    
T  3257250 cattaaatatatccactaatattaaaaagacaaacattaaataagagatagaaaagtcttttaaacaatagttacgccttaaaagttgtgatattttctt 3257349  T
Q  547 ataaa 551  Q
    |||||    
T  3257350 ataaa 3257354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 423 - 551
Target Start/End: Complemental strand, 10705154 - 10705027
Alignment:
Q  423 ataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactaca 522  Q
    |||||||||||||||||||| |||||| || |||||  || ||| |||||||||||| |||||||| |||| || |||||||||||||| || |||||||    
T  10705154 ataccctcataaaaaattataaagcataaagtacattcacaaatgttaaaaagacaagcattaaattagggatagaaaagtcttttaaataa-aactaca 10705056  T
Q  523 tcttaaaaattgtgatattttcttataaa 551  Q
     |||||||||||||| |||||||||||||    
T  10705055 ccttaaaaattgtgacattttcttataaa 10705027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 376 - 561
Target Start/End: Complemental strand, 27193187 - 27193004
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    |||||| | |||||||||| ||| | ||||||| ||| |||||||||||| | ||||||||||||||||| ||||||| | |   | | |||||||||||    
T  27193187 ccaatataatcattaattaatgtta-tttttga-tatttttacaaatatatcatcataaaaaattatgaaacattaaaaatactcagttatattaaaaag 27193090  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaac 561  Q
    | |  |||||||| | || || ||||||||||||||||||||||| ||||||||| |||||| |||| ||||||||||||| ||||    
T  27193089 agatgcattaaatgaaggataaaaaagtcttttaaacaataactatatcttaaaagttgtgacatttccttataaataggatcaac 27193004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 402 - 553
Target Start/End: Complemental strand, 4449589 - 4449438
Alignment:
Q  402 tttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacatt-aaataaggggtataaa 500  Q
    ||||||||||| ||||||||||||||||||| | ||||| |||  ||||||||||| | | ||| |||||||||||||||||| |||| | ||||| |||    
T  4449589 tttttgaatatttttacaaatataccctcatgagaaattgtga--cattaaatacaaccattaagattaaaaagacaaacattgaaatga-gggtaaaaa 4449493  T
Q  501 agtcttttaaacaataact--acatcttaaaaattgtgatattttcttataaata 553  Q
    ||||||||||  ||||| |  ||| |||||||||||||| |||||||||||||||    
T  4449492 agtcttttaagaaataaatacacaccttaaaaattgtgacattttcttataaata 4449438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 414 - 586
Target Start/End: Complemental strand, 7735894 - 7735722
Alignment:
Q  414 tttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaaca 513  Q
    |||||||||||||||| |||||||||| | || ||||||||||| |  ||||||||||||| | |||||||||||||  | || |||||| ||||||  |    
T  7735894 tttacaaatatacccttataaaaaattgtcaaacattaaatacacccgctaatattaaaaacaaaaacattaaataattgatagaaaagttttttaagta 7735795  T
Q  514 ataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatat 586  Q
    |||||| ||  | |||| | | ||||||||||||||| || |||||| |  | ||||||||||||||| ||||    
T  7735794 ataactgcaattcaaaagtagcgatattttcttataattatgaccaaaatttcttttgaaaattttctcatat 7735722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 376 - 530
Target Start/End: Original strand, 29948037 - 29948192
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    ||||| || |||||| ||| |||||||||||  |||| ||||||||||||| || |||||||||||| || |||||||||||   | ||||||||||||     
T  29948037 ccaatgcaatcattatttaatgtaacttttttgatatttttacaaatatactctaataaaaaattataaaacattaaatacactcattaatattaaaaat 29948136  T
Q  476 acaaacattaaat-aaggggtataaaagtcttttaaacaataactacatcttaaaa 530  Q
    | ||||||||||| |||| |||| |||   ||||||||||||| |||| |||||||    
T  29948137 ataaacattaaataaaggagtattaaaactttttaaacaataaatacaccttaaaa 29948192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 378 - 496
Target Start/End: Complemental strand, 14418034 - 14417914
Alignment:
Q  378 aatacactcattaattagtgtaactttttg--aatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    |||| |||||||||||||||||  |||||   |||||  |||||||| |||| |||||||||||| |||||||||||||||| | ||||||||| ||||     
T  14418034 aatatactcattaattagtgtattttttttttaatattcttacaaatttaccttcataaaaaattgtgaagcattaaatacacccactaatatttaaaat 14417935  T
Q  476 acaaacattaaataaggggta 496  Q
    ||||| |||||| ||||||||    
T  14417934 acaaatattaaacaaggggta 14417914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 67 - 231
Target Start/End: Complemental strand, 1160392 - 1160228
Alignment:
Q  67 taaacaattatgcttttccaagttgacacgcgtcggaattcgatctaaaagagtcttccaaacaaaagccatgacctttgaaggtgcccccgttttccaa 166  Q
    |||||||||  | |||||||| || |||||||  || |||| ||| |  |||| |||||||||||||||  | ||||| ||||| ||||| || ||||||    
T  1160392 taaacaattccgtttttccaaattaacacgcgaagggattcaatcaaggagagccttccaaacaaaagcactcaccttggaaggagccccggtcttccaa 1160293  T
Q  167 atttgtcggaacaccctccgctccccttccggacgattaacctccaaaacctccctcctttccaa 231  Q
    ||||| || |||||||||| ||||||| |||||||  |||| ||||||||||| |||| ||||||    
T  1160292 atttggcgaaacaccctcctctcccctaccggacgggtaacttccaaaacctctctcccttccaa 1160228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 653 - 750
Target Start/End: Original strand, 41539335 - 41539432
Alignment:
Q  653 gggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattctaaccaccaaactatttga 750  Q
    ||||||||||| ||||||||| ||||||||  ||||||  ||| | ||||||||||||||||||||||||| |||||||||  ||| | |||||||||    
T  41539335 gggacatgcataattatatgcaggggttgtagttcgaaccccagacaccccacttattaatcttgaaaaaggtgaattctagtcactagactatttga 41539432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 414 - 595
Target Start/End: Original strand, 19296167 - 19296348
Alignment:
Q  414 tttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaaca 513  Q
    |||||| ||||||||||||||||| || | ||  |||||| |||||  |||||||||||| || |||||||||||| ||  || ||||||||||||| ||    
T  19296167 tttacatatataccctcataaaaa-ttgtaaaatattaaacacatccgctaatattaaaatgagaaacattaaatatgga-tagaaaagtcttttaagca 19296264  T
Q  514 ataactacatcttaaaaattgtgatattttcttataaataggaccaa--caaattttttgaaaattttcttatatttaggaccg 595  Q
    |||||||||  |||||| |||||| ||||| |||||   ||||||||    | ||||||||||||||| ||||| | |||||||    
T  19296265 ataactacactttaaaagttgtgacatttttttatattgaggaccaattttatttttttgaaaattttattataataaggaccg 19296348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 414 - 554
Target Start/End: Complemental strand, 17693699 - 17693562
Alignment:
Q  414 tttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtata-aaagtcttttaaac 512  Q
    ||||||||||||||||| |||||  |||||||| |    ||| ||| |||| |||||||| || ||||||| ||| |||  || | |||||||||||       
T  17693699 tttacaaatataccctcgtaaaattttatgaagta----atatatccactagtattaaaatgataaacattgaatgaggactaaagaaagtcttttatgt 17693604  T
Q  513 aataactacatcttaaaaattgtgatattttcttataaatag 554  Q
    ||||| ||||||||||||||||||| ||||||||||||||||    
T  17693603 aataaatacatcttaaaaattgtgacattttcttataaatag 17693562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 442 - 520
Target Start/End: Original strand, 36482456 - 36482534
Alignment:
Q  442 tgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataacta 520  Q
    |||| ||||||||||||  ||||||| || ||| ||||  ||||||||||||||| ||||||||||||| |||||||||    
T  36482456 tgaaacattaaatacattcactaataatagaaatacaattattaaataaggggtagaaaagtcttttaagcaataacta 36482534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 500 - 553
Target Start/End: Original strand, 10656502 - 10656555
Alignment:
Q  500 aagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaata 553  Q
    ||||||||||| ||||||||||||| ||||| || |||||||||||||||||||    
T  10656502 aagtcttttaagcaataactacatcataaaagttttgatattttcttataaata 10656555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 699 - 750
Target Start/End: Original strand, 4429210 - 4429261
Alignment:
Q  699 accccacttattaatcttgaaaaagatgaattctaaccaccaaactatttga 750  Q
    |||||||||||| ||||| ||||||||||||||||||||  |||||||||||    
T  4429210 accccacttattcatcttaaaaaagatgaattctaaccattaaactatttga 4429261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 451 - 560
Target Start/End: Complemental strand, 35931646 - 35931539
Alignment:
Q  451 aaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataa 550  Q
    ||||||||| | |||||||||||| |  | |||||||| | ||| | ||||||| |||||| ||||||||||  ||| || || ||| ||||||||||||    
T  35931646 aaatacatctattaatattaaaaata--atcattaaatgaaggggagaaaagtcatttaaaaaataactacactttagaagttatgaaattttcttataa 35931549  T
Q  551 ataggaccaa 560  Q
    ||||||||||    
T  35931548 ataggaccaa 35931539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 39971091 - 39971014
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaat-attttttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    |||||||||||| ||||||||||||||| ||||||| |||||||| ||||| ||| |||| | | ||||||||||||||    
T  39971091 gaaaatatcaaagggatcttataaaaagggacaaattattttttc-aaaagagtcttataattagggacggaggtagta 39971014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 9978060 - 9977980
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaatattttt--tctaaaagggtcctatagtaaaggacggaggtagtac 332  Q
    ||||||||||||||| |||||||||||  || || | |||||  ||||||||||||||||| ||| ||||||||| |||||    
T  9978060 gaaaatatcaaaagggtcttataaaaaaggataattttttttcttctaaaagggtcctataataagggacggagggagtac 9977980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 457
Target Start/End: Complemental strand, 14917877 - 14917820
Alignment:
Q  400 actttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaataca 457  Q
    ||||||| || || ||||||||||||||||| ||||||||| ||||| ||||||||||    
T  14917877 actttttaaacatttttacaaatataccctcgtaaaaaattgtgaagaattaaataca 14917820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 701 - 750
Target Start/End: Original strand, 29561717 - 29561766
Alignment:
Q  701 cccacttattaatcttgaaaaagatgaattctaaccaccaaactatttga 750  Q
    |||||||||| |||||||||||| |||||||||||||| |||||| ||||    
T  29561717 cccacttattcatcttgaaaaaggtgaattctaaccactaaactagttga 29561766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 498 - 554
Target Start/End: Complemental strand, 10561447 - 10561391
Alignment:
Q  498 aaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaatag 554  Q
    |||||||||||||||||||||||||| | ||||| ||||| | ||||||| ||||||    
T  10561447 aaaagtcttttaaacaataactacatttaaaaaagtgtgacaatttcttacaaatag 10561391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 20142221 - 20142296
Alignment:
Q  256 aaatatcaaaaggatcttataaaaagagacaaatattttttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    ||||| |||| || |||||||||||| ||||| | ||||||| ||||||||| |||| | | ||||||||||||||    
T  20142221 aaatagcaaaggggtcttataaaaagggacaatttttttttccaaaagggtcttataattagggacggaggtagta 20142296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 710
Target Start/End: Original strand, 25660903 - 25660990
Alignment:
Q  623 atcgtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttatt 710  Q
    |||||||||| |||||||| | |||||| ||||| ||||||| |||||||| ||||  | ||||||||  ||| | ||||||||||||    
T  25660903 atcgtccccgtgagcatagctcagttggcagggatatgcattgttatatgcaggggccgggattcgaaccccagacaccccacttatt 25660990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 461 - 535
Target Start/End: Complemental strand, 5712790 - 5712716
Alignment:
Q  461 actaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgt 535  Q
    ||||||||||||| |||||||| |||||    |||| |||||||||| ||||||||| ||||| |||||| ||||    
T  5712790 actaatattaaaatgacaaacactaaatggatggtagaaaagtctttaaaacaataattacattttaaaagttgt 5712716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 672
Target Start/End: Original strand, 10106624 - 10106670
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggacatgcattattatatg 672  Q
    |||||||||||||||| | |||||| |||||||| ||||||||||||    
T  10106624 gtccccgcgagcatagctcagttggcagggacatccattattatatg 10106670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 699 - 745
Target Start/End: Complemental strand, 18101977 - 18101931
Alignment:
Q  699 accccacttattaatcttgaaaaagatgaattctaaccaccaaacta 745  Q
    |||||||||||| | ||| |||| |||||||||||||||||||||||    
T  18101977 accccacttattcaccttaaaaatgatgaattctaaccaccaaacta 18101931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 655 - 745
Target Start/End: Original strand, 40384274 - 40384364
Alignment:
Q  655 gacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattctaaccaccaaacta 745  Q
    ||||||||||||||||||| | || || | |||||| |||  | |||||||||||| | ||| |||||| ||||||||| |||| ||||||    
T  40384274 gacatgcattattatatgcagcggctggggttcgaactccggacaccccacttattcaccttaaaaaaggtgaattctagccactaaacta 40384364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 679
Target Start/End: Complemental strand, 7147120 - 7147067
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggt 679  Q
    ||||||| |||||||| | |||||| | |||||||||||||||||||| |||||    
T  7147120 gtccccgtgagcatagctcagttggtaaggacatgcattattatatgcaggggt 7147067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 1e-49; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 386 - 605
Target Start/End: Original strand, 36437179 - 36437398
Alignment:
Q  386 cattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcg-actaatattaaaaagacaaacatt 484  Q
    ||||||||  ||||||||||| || || |||||||||||||||| ||| ||  || |||| |||||||||||||  |||||||||||||||||| |||||    
T  36437179 cattaattgttgtaactttttaaacatttttacaaatatacccttatagaatgttgtgaaacattaaatacatcccactaatattaaaaagacagacatt 36437278  T
Q  485 aaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttat 584  Q
    |||| |||| || ||||||||||||| |||||||||   ||||||| |||||| |||||||||||||||||||||| |  ||||||||||||||||||||    
T  36437279 aaatgagggataaaaaagtcttttaagcaataactatc-cttaaaagttgtgacattttcttataaataggaccaaaactttttttgaaaattttcttat 36437377  T
Q  585 atttaggaccgaagggagtat 605  Q
    ||| ||||||| |||||||||    
T  36437378 attaaggaccggagggagtat 36437398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 402 - 604
Target Start/End: Original strand, 17971358 - 17971560
Alignment:
Q  402 tttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaa 501  Q
    ||||||||| | ||||||||||||||||| |||||| || ||||| |||||||| |   ||||||||| ||||||| |||||||||| |||| || ||||    
T  17971358 tttttgaatgtttttacaaatataccctcttaaaaatttgtgaagtattaaatatacacactaatattgaaaagaccaacattaaatgagggttagaaaa 17971457  T
Q  502 gtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatatttaggaccgaaggga 601  Q
    |||||||||||||||| || | ||||||| ||||||  ||||||||||||||||||||| |  |||||||||||||||||||||| |||||||  |||||    
T  17971458 gtcttttaaacaataaatataccttaaaagttgtgactttttcttataaataggaccaaaacgttttttgaaaattttcttatatataggaccagaggga 17971557  T
Q  602 gta 604  Q
    |||    
T  17971558 gta 17971560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 389 - 604
Target Start/End: Original strand, 42454854 - 42455071
Alignment:
Q  389 taattagtgtaactttt-tgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaa 487  Q
    |||||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| |||||    
T  42454854 taattagtgtaatttttttgaatatttttataaatataccctcataaaaaattatgaagcattaaatacactcactaatattaaaaagacaaacgttaaa 42454953  T
Q  488 taaggggtataaaagtcttttaaacaataactacatcttaaaaattgtg--atattttcttataaataggaccaacaaattttttgaaaattttcttata 585  Q
    |||  || |||||||||||||||||| | |||||| ||||||| |||||  || |||| |||||||| ||||||| |  |||||| || |||||||||||    
T  42454954 taaaaggcataaaagtcttttaaacattcactacaccttaaaagttgtgacatttttttttataaattggaccaa-atttttttttaacattttcttata 42455052  T
Q  586 tttaggaccgaagggagta 604  Q
    | || ||||| ||| ||||    
T  42455053 tataagaccggaggaagta 42455071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 376 - 595
Target Start/End: Original strand, 28165095 - 28165316
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    |||||||| |||| ||||| ||||| ||||||||||| |||||||||||||||| |||||||||| |||| ||||||||||||| || ||||||||||||    
T  28165095 ccaatacaatcatcaattattgtaattttttgaatatttttacaaatatacccttataaaaaattgtgaaacattaaatacatctaccaatattaaaaag 28165194  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaatttttt--gaa 573  Q
    | ||| | | ||| ||||||| |||| |||||||| ||||||||| | ||| ||| |||||| ||||| |||||||||| |||||  ||||||||   ||    
T  28165195 ataaagacttaatgaggggtaaaaaaatcttttaagcaataactatacctttaaagttgtgacattttattataaatagaaccaaataattttttaaaaa 28165294  T
Q  574 aattttcttatatttaggaccg 595  Q
    ||||||||||||  ||||||||    
T  28165295 aattttcttataaataggaccg 28165316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 397 - 606
Target Start/End: Complemental strand, 42745700 - 42745492
Alignment:
Q  397 gtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggta 496  Q
    |||||||||| || || |||||||||||||||| ||| ||  || |||| ||||||||||||| ||||||||||||||| ||| | |||||| |||| ||    
T  42745700 gtaactttttaaacatttttacaaatatacccttatagaatgttgtgaaacattaaatacatccactaatattaaaaaggcaatccttaaatgagggata 42745601  T
Q  497 taaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatatttaggaccga 596  Q
     |||||| ||||||||||||| || |  | ||||||||||| ||||||||||||||||||||||    |||||||||| |||||||| ||| |||| ||     
T  42745600 -aaaagtattttaaacaataattatacttcaaaaattgtgacattttcttataaataggaccaaatttttttttgaaatttttcttacattaaggatcgg 42745502  T
Q  597 agggagtata 606  Q
    ||||||||||    
T  42745501 agggagtata 42745492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 79 - 243
Target Start/End: Complemental strand, 21972046 - 21971882
Alignment:
Q  79 cttttccaagttgacacgcgtcggaattcgatctaaaagagtcttccaaacaaaagccatgacctttgaaggtgcccccgttttccaaatttgtcggaac 178  Q
    |||||||||||||||||  ||||| |||||||||||||||| ||||| ||||||||  || ||||| ||||||||||||||||||||||||| ||| |||    
T  21972046 cttttccaagttgacacatgtcgggattcgatctaaaagagccttcccaacaaaagaaatcaccttggaaggtgcccccgttttccaaatttttcgaaac 21971947  T
Q  179 accctccgctccccttccggacgattaacctccaaaacctccctcctttccaacttcaaatacaa 243  Q
    |||||||| ||||| ||||| | |   ||||||| || |||||||| ||||||||| ||||||||    
T  21971946 accctccgttccccctccggtcaagacacctccagaatctccctcccttccaactttaaatacaa 21971882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 396 - 558
Target Start/End: Complemental strand, 31152591 - 31152431
Alignment:
Q  396 tgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggt 495  Q
    ||||||||||||||||| ||||||||||||| ||||||||||  | |||| |||||||||| |  ||||||||||||| || ||||||||||| ||||||    
T  31152591 tgtaactttttgaatatttttacaaatatacgctcataaaaa--tgtgaaacattaaatacgttcactaatattaaaa-gagaaacattaaatgaggggt 31152495  T
Q  496 ataaaagtcttttaaacaataactacatcttaaaaattgtgatattt-tcttataaataggacc 558  Q
    |  |||||||||||| ||||||| ||||||||||| ||||||||||| | ||||||||||||||    
T  31152494 agcaaagtcttttaagcaataacgacatcttaaaagttgtgatatttcttttataaataggacc 31152431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 414 - 550
Target Start/End: Original strand, 39150189 - 39150324
Alignment:
Q  414 tttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaaca 513  Q
    |||||||||||||||||||||||  || ||||||||||||||||   | |||||||||||| | ||||||||||||||||||| ||||||||||||| ||    
T  39150189 tttacaaatataccctcataaaag-ttgtgaagcattaaatacactcattaatattaaaaacaaaaacattaaataaggggtagaaaagtcttttaagca 39150287  T
Q  514 ataactacatcttaaaaattgtgatattttcttataa 550  Q
    ||||||||| ||||||| | |||||||||||||||||    
T  39150288 ataactacaccttaaaagtagtgatattttcttataa 39150324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 391 - 605
Target Start/End: Original strand, 9851798 - 9852010
Alignment:
Q  391 attagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataa 490  Q
    |||| ||||||||||||||||| |||||||||||||| | |||||| | | |||| ||||||||| | | ||||||||| |||||| ||||||||||| |    
T  9851798 attaatgtaactttttgaatatttttacaaatatacctttataaaatactgtgaaacattaaatatacccactaatatttaaaagagaaacattaaat-a 9851896  T
Q  491 ggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatatttag 590  Q
    ||| || ||| ||| ||||| |||||||||||  |||||| |||||| |||||||||||||||||| ||| |||   ||| |||||||||||||||| |     
T  9851897 gggataaaaaggtcatttaagcaataactacactttaaaagttgtgacattttcttataaatagga-caaaaaaaaatttaaaaattttcttatattaaa 9851995  T
Q  591 gaccgaagggagtat 605  Q
    || || |||||||||    
T  9851996 gaacggagggagtat 9852010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 461 - 604
Target Start/End: Complemental strand, 24547520 - 24547376
Alignment:
Q  461 actaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaac-aataactacatcttaaaaattgtgatattttcttataaataggacca 559  Q
    ||||||||| |||||||||||||||||| | || ||||||||| ||||     |||||||||||||||||| |||||| |||||||||||||||||| ||    
T  24547520 actaatattgaaaagacaaacattaaatgaaggatataaaagtttttttttgtaataactacatcttaaaacttgtgacattttcttataaataggatca 24547421  T
Q  560 acaaattttttgaaaattttcttatatttaggaccgaagggagta 604  Q
    | ||| |||||||||||||||||||| | ||||||||||||||||    
T  24547420 aaaaaatttttgaaaattttcttataataaggaccgaagggagta 24547376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 396 - 604
Target Start/End: Complemental strand, 32715850 - 32715643
Alignment:
Q  396 tgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggt 495  Q
    ||||| ||||||||| | |||||||||||| ||||||||||| || ||||| |||||||| | | ||||||||| ||||||  |||||||||| |||| |    
T  32715850 tgtaattttttgaatgtttttacaaatatatcctcataaaaatttgtgaagtattaaatatacccactaatattgaaaagatcaacattaaatgagggct 32715751  T
Q  496 ataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttatatttaggaccg 595  Q
    | ||||| |||||||||||||| |  | ||||||| ||||||  |||||||||||||||||||||    |||||  |||||||| |||||| ||||||||    
T  32715750 agaaaagacttttaaacaataaat-gaccttaaaatttgtgactttttcttataaataggaccaaattttttttaaaaaattttgttatatataggaccg 32715652  T
Q  596 aagggagta 604  Q
     ||||||||    
T  32715651 gagggagta 32715643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 402 - 585
Target Start/End: Original strand, 27442368 - 27442550
Alignment:
Q  402 tttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaa 501  Q
    ||||||||| | |||||||||||| ||||||||||| || ||||| |||||||| | | | ||||||| ||| ||| |||||||||| |||| || ||||    
T  27442368 tttttgaatgtttttacaaatatatcctcataaaaatttgtgaagtattaaatatacccattaatattgaaa-gaccaacattaaatgagggttagaaaa 27442466  T
Q  502 gtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttata 585  Q
    |||||||||||| ||| || |  |||||| ||||||| |||||||||||||||||||||    |||||||||||||||||||||    
T  27442467 gtcttttaaacactaaatatactttaaaagttgtgattttttcttataaataggaccaagtttttttttgaaaattttcttata 27442550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 427 - 585
Target Start/End: Complemental strand, 11435679 - 11435520
Alignment:
Q  427 cctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatctt 526  Q
    |||||||||||||| ||| |||||||||||||| |||||||||||||| |||||||||||||||  | ||||||||| ||||||||||||| || | |||    
T  11435679 cctcataaaaaattgtgatgcattaaatacatccactaatattaaaaaaacaaacattaaataaatgatataaaagt-ttttaaacaataattatacctt 11435581  T
Q  527 aaaaattgtgatattttcttataaataggac--caacaaattttttgaaaattttcttata 585  Q
    | || |||||| |||||||||||||||| ||  |||||||    |||||||||||||||||    
T  11435580 ataagttgtgacattttcttataaatagtacaacaacaaaaaaattgaaaattttcttata 11435520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 376 - 605
Target Start/End: Complemental strand, 28470106 - 28469882
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    ||||| || ||||| |||| || |||||||||||||| ||||||    ||| ||||||||||||| |||| ||||||||||| | || |||||| |||||    
T  28470106 ccaatgcattcattgattaatgcaactttttgaatat-tttaca----tactctcataaaaaattgtgaaacattaaatacacccacaaatatttaaaag 28470012  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttg-aaa 574  Q
    | ||||||||||||| || || ||||| | |||||  |||||||||| ||||||| |||||| ||||| |||||||||||||  | |  ||||||| |||    
T  28470011 agaaacattaaataa-ggatagaaaagacatttaagtaataactacaccttaaaatttgtgacatttttttataaataggacttaaattttttttgaaaa 28469913  T
Q  575 attttcttatatttaggaccgaagggagtat 605  Q
    ||||||||||||| || ||||||||| ||||    
T  28469912 attttcttatattaagaaccgaagggtgtat 28469882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 398 - 553
Target Start/End: Original strand, 31181043 - 31181199
Alignment:
Q  398 taactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaataca-tcgactaatattaaaaagacaaa-cattaaataaggggt 495  Q
    ||||||||||||||| ||||||| |||||||| ||| |||||| |||| ||||||||||| ||| ||||||||||||| | ||| |||||||| | | ||    
T  31181043 taactttttgaatatttttacaagtatacccttatagaaaattgtgaaacattaaatacactcg-ctaatattaaaaaaaaaaaacattaaatgaagtgt 31181141  T
Q  496 ataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaata 553  Q
    | ||||||||||||||||||||||| |  |||||| |||||| |||||||||||||||    
T  31181142 aaaaaagtcttttaaacaataactataagttaaaagttgtgacattttcttataaata 31181199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 387 - 560
Target Start/End: Complemental strand, 3574894 - 3574720
Alignment:
Q  387 attaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgac--taatattaaaaagacaaacatt 484  Q
    |||||||| ||||| ||||||||| | |||| |||||||| || |||||||||| ||||  |||||||||||  |   ||||||||||| || |||||||    
T  3574894 attaattattgtaa-tttttgaatgtttttataaatatactcttataaaaaattgtgaaatattaaatacattcaaattaatattaaaatgataaacatt 3574796  T
Q  485 aaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaa 560  Q
    |||| ||||||| | || | ||||||||||||||||||| | |||| |||||| ||||||||||||||||||||||    
T  3574795 aaatgaggggtagacaaattttttaaacaataactacatttgaaaagttgtgacattttcttataaataggaccaa 3574720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 471 - 557
Target Start/End: Original strand, 17988348 - 17988434
Alignment:
Q  471 aaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggac 557  Q
    |||||| || |||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||| |||||||||||| ||||||    
T  17988348 aaaagagaagcattaaataaggggtaaaaaagtcttttaaacaataactacaccttaaaagttgtgacattttcttataagtaggac 17988434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 396 - 517
Target Start/End: Original strand, 28723954 - 28724075
Alignment:
Q  396 tgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggt 495  Q
    ||||| |||||||||   |||||| ||||||||||||||||| || ||||| |||||||| | | |||||||||||||||| ||||||||| | |||| |    
T  28723954 tgtaattttttgaatgcttttacagatataccctcataaaaatttgtgaagtattaaatataaccactaatattaaaaagataaacattaattgagggtt 28724053  T
Q  496 ataaaagtcttttaaacaataa 517  Q
    | |||||||||||||| |||||    
T  28724054 agaaaagtcttttaaataataa 28724075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 402 - 556
Target Start/End: Complemental strand, 46443852 - 46443700
Alignment:
Q  402 tttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaa 501  Q
    ||||||||||| ||||||||||||||| |||||||| || |||| ||||| ||||||  ||||| |||||||||| ||  || |||| |||| || ||||    
T  46443852 tttttgaatatttttacaaatatacccacataaaaa-ttgtgaaacattatatacattcactaacattaaaaagagaactat-aaatgagggataaaaaa 46443755  T
Q  502 gtcttttaaacaataactacatcttaaaaattgtgatattttcttataaatagga 556  Q
    || ||||||  ||||| |||| ||||||| ||||||  |||||||||||||||||    
T  46443754 gttttttaagtaataattacaccttaaaagttgtgacgttttcttataaatagga 46443700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 25130099 - 25130026
Alignment:
Q  465 atattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgat 538  Q
    |||||||||||||| ||| |||||||| |||| |||| ||||||||||||||||||| ||||||||||||||||    
T  25130099 atattaaaaagacagacaataaataagaggtaaaaaattcttttaaacaataactacgtcttaaaaattgtgat 25130026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 396 - 558
Target Start/End: Original strand, 31003574 - 31003732
Alignment:
Q  396 tgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggt 495  Q
    ||||||||||||||||| |||||||||||||| | ||| |||||| | || ||||||||||||   ||||||||||||| | ||| |  ||| |     |    
T  31003574 tgtaactttttgaatatttttacaaatatacctttatagaaaattgttaaacattaaatacattcgctaatattaaaaaaaaaaaaaacaaacat----t 31003669  T
Q  496 ataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggacc 558  Q
    |  ||| ||||||||||| |||||||| ||||||| |||||| ||||||||||||||||||||    
T  31003670 aagaaaatcttttaaacagtaactacaccttaaaagttgtgacattttcttataaataggacc 31003732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 377 - 570
Target Start/End: Original strand, 2619657 - 2619845
Alignment:
Q  377 caatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaa-ttatgaagcattaaatacatcgactaatattaaaaag 475  Q
    ||||||| |||||| |||   ||||||||||||||| | | ||| ||||||||||||||||| || | ||||||||||| |||   ||||| || ||||     
T  2619657 caatacaatcattagttaaaataactttttgaatatttgtgcaattataccctcataaaaaaattgtcaagcattaaatgcattctctaatgtttaaaaa 2619756  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaatttttt 570  Q
    ||||||||||||| ||||||| ||||   ||||||| |||||||||      | | |||||||||||||||||||||| |||||| |||| ||||    
T  2619757 acaaacattaaatgaggggtagaaaaaaattttaaataataactac------acagttgtgatattttcttataaataagaccaaaaaatatttt 2619845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 626 - 738
Target Start/End: Original strand, 42908765 - 42908877
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagat 725  Q
    ||||||| |||| ||| | |||||| ||||||||||||| |||||||| ||||| | | |||||| |||  ||||||||||||||  |||||||||||      
T  42908765 gtccccgtgagcttagctcagttggcagggacatgcattgttatatgcaggggtcggggttcgaactccggataccccacttattcttcttgaaaaagga 42908864  T
Q  726 gaattctaaccac 738  Q
    |||||||||||||    
T  42908865 gaattctaaccac 42908877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 625 - 738
Target Start/End: Original strand, 41677053 - 41677166
Alignment:
Q  625 cgtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaaga 724  Q
    |||||||| |||| ||| | |||||| || ||||| ||||||||||||||||||| | | |||||| |||  | |||||||||||| | ||||||||||     
T  41677053 cgtccccgtgagcgtagctcagttggcagagacattcattattatatgcgggggtcggggttcgaactccggacaccccacttattcaccttgaaaaagg 41677152  T
Q  725 tgaattctaaccac 738  Q
    ||||||||| ||||    
T  41677153 tgaattctagccac 41677166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 634 - 738
Target Start/End: Complemental strand, 9769673 - 9769569
Alignment:
Q  634 gagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattcta 733  Q
    |||||||| | |||||| |||||||||||||||||||||  ||| ||| | ||||||  ||  | |||||||||||| | |||||||||| |||||||||    
T  9769673 gagcatagctcagttggcagggacatgcattattatatgtagggattggggttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattcta 9769574  T
Q  734 accac 738  Q
    |||||    
T  9769573 accac 9769569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 626 - 733
Target Start/End: Complemental strand, 9768910 - 9768803
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagat 725  Q
    ||||||| |||||||| | |||||| ||||||||||||| |||||||| ||||| | | ||||||  ||  | |||||||||||| | |||||||||| |    
T  9768910 gtccccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcaccttgaaaaaggt 9768811  T
Q  726 gaattcta 733  Q
    ||||||||    
T  9768810 gaattcta 9768803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 654 - 733
Target Start/End: Complemental strand, 11238101 - 11238022
Alignment:
Q  654 ggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattcta 733  Q
    |||||||||||||||||||| ||||| | | ||||||| ||  | |||||||||||| |||||||||||| |||||||||    
T  11238101 ggacatgcattattatatgcaggggtcggggttcgaatcccggacaccccacttattcatcttgaaaaaggtgaattcta 11238022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 616 - 738
Target Start/End: Original strand, 195028 - 195150
Alignment:
Q  616 ataatcaatcgtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatct 715  Q
    ||||||||  ||||| | |||| ||| | |||||| |||||||||||| ||||||||| |||| || | |||| |  ||| | |||||||||||| | ||    
T  195028 ataatcaacggtccctgtgagcgtagctcagttggcagggacatgcataattatatgcaggggctgaggttcgtaccccagacaccccacttattcacct 195127  T
Q  716 tgaaaaagatgaattctaaccac 738  Q
    |||||||| ||||||||||||||    
T  195128 tgaaaaaggtgaattctaaccac 195150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 461 - 547
Target Start/End: Original strand, 29657969 - 29658054
Alignment:
Q  461 actaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttctta 547  Q
    |||||||||||||||||||| ||||||||| || |  |||||||||||| ||||||| | ||||||||||||| | | |||||||||    
T  29657969 actaatattaaaaagacaaa-attaaataaaggcttaaaaagtcttttacacaataaatgcatcttaaaaattataaaattttctta 29658054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 498 - 559
Target Start/End: Complemental strand, 34702258 - 34702197
Alignment:
Q  498 aaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggacca 559  Q
    ||||||||||||| ||||||||||| ||||||| ||| |||||||||| ||||||| |||||    
T  34702258 aaaagtcttttaagcaataactacaacttaaaagttgagatattttctaataaatatgacca 34702197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 378 - 549
Target Start/End: Original strand, 948123 - 948285
Alignment:
Q  378 aatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaa-ttatgaagcattaaatacatcgactaatattaaaaaga 476  Q
    |||||| | |||||||| |  |||||||| ||||| ||| |||||||||||| |||||||| ||  ||| ||||||||||||| |||||| |||||||      
T  948123 aatacaattattaattaataaaactttttaaatattttttcaaatataccctgataaaaaatttgcgaaacattaaatacatccactaat-ttaaaaa-- 948219  T
Q  477 caaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttata 549  Q
           ||||| |||| || |||| |||||||  | |||||||||||||||||||||| | |||||||||||    
T  948220 -------taaatgagggatagaaaaatcttttaggctataactacatcttaaaaattgtaacattttcttata 948285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 414 - 517
Target Start/End: Complemental strand, 13603212 - 13603106
Alignment:
Q  414 tttacaaatataccctcataaaaaattatgaag---cattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaa 510  Q
    |||||||||||||||||||||||| || |||||    |||||||| | | ||||||||||||||||||||| || | | | || || ||||||||||| |    
T  13603212 tttacaaatataccctcataaaaatttgtgaagtattattaaatataaccactaatattaaaaagacaaacttttattgaaggttagaaaagtcttttga 13603113  T
Q  511 acaataa 517  Q
    |||||||    
T  13603112 acaataa 13603106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 627 - 750
Target Start/End: Complemental strand, 9410427 - 9410305
Alignment:
Q  627 tccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatg 726  Q
    |||||| |||||||| | |||||| | ||||||||||  |||||||| ||| ||| ||||||||   || | |||||||||||| |||||||||||| ||    
T  9410427 tccccgtgagcatagttcagttggcaaggacatgcatagttatatgcaggg-ttgagattcgaacctcagacaccccacttattcatcttgaaaaaggtg 9410329  T
Q  727 aattctaaccaccaaactatttga 750  Q
    |||| |||| || |||||| ||||    
T  9410328 aattttaactactaaactacttga 9410305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 635 - 738
Target Start/End: Original strand, 16182812 - 16182915
Alignment:
Q  635 agcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattctaa 734  Q
    ||||||| | |||||| || ||||||||||||||||||  |||| || | ||| ||  ||  | |||||||||||| ||||||||||| |||||||||||    
T  16182812 agcatagctcagttggcagagacatgcattattatatgtaggggctggggttcaaaccccggacaccccacttattcatcttgaaaaatatgaattctaa 16182911  T
Q  735 ccac 738  Q
    ||||    
T  16182912 ccac 16182915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 376 - 439
Target Start/End: Original strand, 52336841 - 52336904
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaat 439  Q
    |||||| | |||||||||| |||||||||||  |||| ||||| ||||||||||||||||||||    
T  52336841 ccaatataatcattaattaatgtaactttttagatatttttactaatataccctcataaaaaat 52336904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 45691591 - 45691641
Alignment:
Q  396 tgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaag 446  Q
    ||||| ||||||||||| |||||||||||||||||||||||| || |||||    
T  45691591 tgtaattttttgaatatttttacaaatataccctcataaaaatttgtgaag 45691641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 750
Target Start/End: Original strand, 13941332 - 13941437
Alignment:
Q  645 agttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattctaaccaccaaact 744  Q
    |||||| | ||||||||||| |||||||| ||| | | | |||||| | |  | |||||||||||| |||||||||||  |||||||||||||| |||||    
T  13941332 agttggcaaggacatgcattgttatatgcagggttcgaggttcgaacttcggacaccccacttattcatcttgaaaaaagtgaattctaaccactaaact 13941431  T
Q  745 atttga 750  Q
    | ||||    
T  13941432 acttga 13941437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 32153756 - 32153831
Alignment:
Q  256 aaatatcaaaaggatcttataaaaagagacaa-atattttttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    ||||| ||||||| |||||||||||| ||||| ||||||||| ||||| |||| |||| | ||||||||||||||||    
T  32153756 aaataacaaaagggtcttataaaaagggacaacatatttttt-taaaaaggtcttataattaaggacggaggtagta 32153831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 646 - 750
Target Start/End: Complemental strand, 50898830 - 50898727
Alignment:
Q  646 gttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattctaaccaccaaacta 745  Q
    ||||| ||| ||||||||| |||||||| || ||   ||||||||  ||| | |||||| ||||| ||||| |||||| |||||||||||||| ||||||    
T  50898830 gttggtaggaacatgcattgttatatgcaggagtctggattcgaaccccagacacccca-ttattcatctttaaaaaggtgaattctaaccactaaacta 50898732  T
Q  746 tttga 750  Q
    |||||    
T  50898731 tttga 50898727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 385 - 468
Target Start/End: Original strand, 17988133 - 17988216
Alignment:
Q  385 tcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatat 468  Q
    |||||||| | | ||||||||  ||||  |||||||||||| |||||||| ||||| |||| |||||||||||||  |||||||    
T  17988133 tcattaataaatataacttttaaaataattttacaaatatatcctcataataaattgtgaaacattaaatacatctgctaatat 17988216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 738
Target Start/End: Original strand, 23750217 - 23750256
Alignment:
Q  699 accccacttattaatcttgaaaaagatgaattctaaccac 738  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  23750217 accccacttattcatcttgaaaaaggtgaattctaaccac 23750256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 387 - 450
Target Start/End: Complemental strand, 25130280 - 25130217
Alignment:
Q  387 attaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcatt 450  Q
    |||||||| ||||| ||||||||||  |||||||||||||| ||||| |||||| |||| ||||    
T  25130280 attaattattgtaaatttttgaatacttttacaaatataccatcatagaaaattgtgaaacatt 25130217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 29437814 - 29437892
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaa-tattttttctaaaagggtcctatagtaaaggacggaggtagtac 332  Q
    |||||||||||| || |||||||||||| |||||| ||||||||| ||||| ||| |||| | | |||||||||||||||    
T  29437814 gaaaatatcaaaggggtcttataaaaagggacaaattattttttc-aaaagagtcttataattagggacggaggtagtac 29437892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 4280094 - 4280163
Alignment:
Q  262 caaaaggatcttataaaaagagacaaa-tattttttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    |||| ||||||||||||||| |||||| ||||||||| ||||||||| |||| | | ||||||||||||||    
T  4280094 caaatggatcttataaaaagggacaaattattttttc-aaaagggtcttataattagggacggaggtagta 4280163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 17483794 - 17483733
Alignment:
Q  270 tcttataaaaagagacaaat-attttttctaaaagggtcctatagtaaaggacggaggtagta 331  Q
    |||||||||||||||||||| |||||||| ||||||||| |||| | | ||||||||||||||    
T  17483794 tcttataaaaagagacaaattattttttc-aaaagggtcttataattagggacggaggtagta 17483733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 463 - 549
Target Start/End: Original strand, 26976628 - 26976714
Alignment:
Q  463 taatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttata 549  Q
    |||||||||||||||||| ||||||| |||| ||  ||| |||||||||||||| ||  |  ||||||  ||||| |||||||||||    
T  26976628 taatattaaaaagacaaatattaaatgagggataacaaattcttttaaacaatagctggagtttaaaaggtgtgaaattttcttata 26976714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 738
Target Start/End: Complemental strand, 32609295 - 32609241
Alignment:
Q  684 attcgaattccaaataccccacttattaatcttgaaaaagatgaattctaaccac 738  Q
    |||||||| ||||| |||||| |||||   |||||||||||||||||||||||||    
T  32609295 attcgaatcccaaacaccccatttattcgccttgaaaaagatgaattctaaccac 32609241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 656 - 738
Target Start/End: Original strand, 35424164 - 35424246
Alignment:
Q  656 acatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattctaaccac 738  Q
    ||||||||| ||||||||  ||| || ||||||||  ||  |||||||| ||||| | |||||||||||||||||||| ||||    
T  35424164 acatgcattgttatatgcatgggctgagattcgaaccccggataccccatttattcaccttgaaaaagatgaattctagccac 35424246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 50225378 - 50225457
Alignment:
Q  254 gaaaatatcaaaaggatcttataaaaagagacaaatattttttc---taaaagggtcctatagtaaaggacggaggtagta 331  Q
    ||||||||||| ||  |||||||||||||||||| | |||||||   ||||||||||||||| ||| |||| |||||||||    
T  50225378 gaaaatatcaatagagtcttataaaaagagacaatttttttttcttttaaaagggtcctata-taagggactgaggtagta 50225457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 625 - 738
Target Start/End: Complemental strand, 2643917 - 2643804
Alignment:
Q  625 cgtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaaga 724  Q
    |||||||| |||||||| | |||||| || |||||||||||||||||||  |||| | | || |||  ||| | |||||||||||| | ||| |||||      
T  2643917 cgtccccgtgagcatagcttagttggcagagacatgcattattatatgcatgggtcggggtttgaaccccagacaccccacttattcaccttaaaaaatg 2643818  T
Q  725 tgaattctaaccac 738  Q
    |||| |||||||||    
T  2643817 tgaactctaaccac 2643804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 36674259 - 36674300
Alignment:
Q  255 aaaatatcaaaaggatcttataaaaagagacaaatatttttt 296  Q
    |||||| |||||||||||||||||||| ||||||| ||||||    
T  36674259 aaaatagcaaaaggatcttataaaaagggacaaatttttttt 36674300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 90; Significance: 5e-43; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 376 - 604
Target Start/End: Complemental strand, 3200 - 2971
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    |||||||  |||||||||  |||| |||||| || || |||||||| || |||| ||| ||  || |||| ||||||||||||| |||||||||||||||    
T  3200 ccaatactgtcattaattcttgtacctttttaaacatttttacaaacatgcccttatagaatgttgtgaaacattaaatacatccactaatattaaaaag 3101  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaa-attttttgaaa 574  Q
    | ||  ||| ||| |||| || ||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||| ||  ||||||||||    
T  3100 agaattattgaatgagggatagaaaagtcttttaaacaataactacaccttaaaagttgtgacattttcttataaataggaccaaaaactttttttgaaa 3001  T
Q  575 attttcttatatttaggaccgaagggagta 604  Q
    ||| ||||||||| || |||| ||||||||    
T  3000 attatcttatattgagaaccggagggagta 2971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 86; Significance: 1e-40; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 376 - 604
Target Start/End: Original strand, 467 - 696
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    |||||||  |||||||||  ||||||||||| || || |||||||||||||||| ||| ||  || |||| ||||||||  ||| ||||||||||||| |    
T  467 ccaataccatcattaattgttgtaactttttaaagatttttacaaatatacccttatagaatgttgtgaaacattaaatggatccactaatattaaaacg 566  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaa-caaattttttgaaa 574  Q
    |||| |||||||| |||| || ||||||||||||||||||||||||| ||||||  ||||||  ||||||||||| |||||||||     ||||||||||    
T  567 acaatcattaaatgagggataaaaaagtcttttaaacaataactacaccttaaatgttgtgactttttcttataattaggaccaattgttttttttgaaa 666  T
Q  575 attttcttatatttaggaccgaagggagta 604  Q
    |||| |||||||| ||||||| ||||||||    
T  667 atttacttatattaaggaccggagggagta 696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 85; Significance: 5e-40; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 376 - 560
Target Start/End: Complemental strand, 51451 - 51267
Alignment:
Q  376 ccaatacactcattaattagtgtaactttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaag 475  Q
    |||||||| |||||||||| |||||| |||||||||| ||||||| |||||||||||||||| || |||| ||||||||||| | ||||| |||||||||    
T  51451 ccaatacaatcattaattaatgtaacattttgaatatttttacaattataccctcataaaaagttgtgaaacattaaatacaccaactaaaattaaaaag 51352  T
Q  476 acaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaa 560  Q
    | ||  ||||||| |||| || |||| |||||||| |||||| |||| ||||||| |||||| |||| ||||||||||| |||||    
T  51351 agaattattaaatgagggataaaaaaatcttttaagcaataaatacaccttaaaagttgtgacatttacttataaatagaaccaa 51267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 402 - 585
Target Start/End: Original strand, 38829 - 39010
Alignment:
Q  402 tttttgaatatgtttacaaatataccctcataaaaaattatgaagcattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaa 501  Q
    ||||||||| | ||||||||||||| |||||||||| ||  |||  |||||| | ||| ||||||||| | || || | |||| |||||||| || ||||    
T  38829 tttttgaatgtttttacaaatatactctcataaaaatttgggaactattaaacatatccactaatattgataaaacga-cattcaataagggctagaaaa 38927  T
Q  502 gtcttttaaacaataactacatcttaaaaattgtgatattttcttataaataggaccaacaaattttttgaaaattttcttata 585  Q
     | ||||||||||||| || ||||||||||||||||  |||||||||||||| |||||| |  |||||||| ||||||||||||    
T  38928 atattttaaacaataaatatatcttaaaaattgtgactttttcttataaataagaccaa-actttttttgagaattttcttata 39010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 626 - 750
Target Start/End: Original strand, 1033 - 1157
Alignment:
Q  626 gtccccgcgagcatagatgagttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagat 725  Q
    ||||||| |||||||| | |||||| |||||||||||| ||||||||  |||| || | ||||||  ||| | |||||||||||| | |||||||||| |    
T  1033 gtccccgtgagcatagctcagttggtagggacatgcataattatatgtaggggctggggttcgaaccccagacaccccacttattcaccttgaaaaaggt 1132  T
Q  726 gaattctaaccaccaaactatttga 750  Q
    |||||||| |||| |||||| ||||    
T  1133 gaattctagccactaaactacttga 1157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 455 - 557
Target Start/End: Complemental strand, 68897 - 68798
Alignment:
Q  455 acatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaaacaataactacatcttaaaaattgtgatattttcttataaatag 554  Q
    ||||| ||||||||||||| |||||||||||||| |||  || |||||||||||||  |||||||||| |||||||| | || | |||||||||||||||    
T  68897 acatccactaatattaaaacgacaaacattaaatgaggaataaaaaagtcttttaa--aataactacaccttaaaaagt-tgcttttttcttataaatag 68801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 414 - 517
Target Start/End: Complemental strand, 131869 - 131763
Alignment:
Q  414 tttacaaatataccctcataaaaaattatgaag---cattaaatacatcgactaatattaaaaagacaaacattaaataaggggtataaaagtcttttaa 510  Q
    |||||||||||||||||||||||| || |||||    |||||||| | | ||||||||||||||||||||| || | | | || || ||||||||||| |    
T  131869 tttacaaatataccctcataaaaatttgtgaagtattattaaatataaccactaatattaaaaagacaaacttttattgaaggttagaaaagtcttttga 131770  T
Q  511 acaataa 517  Q
    |||||||    
T  131769 acaataa 131763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 738
Target Start/End: Original strand, 440412 - 440505
Alignment:
Q  645 agttggaagggacatgcattattatatgcgggggttgtgattcgaattccaaataccccacttattaatcttgaaaaagatgaattctaaccac 738  Q
    |||||| ||| |||||||||||||||||  ||||  | | ||||| | || || |||||||||||| | ||| |||||| ||||||||||||||    
T  440412 agttggcaggaacatgcattattatatgtaggggccggggttcgactcccgaacaccccacttattcaccttaaaaaaggtgaattctaaccac 440505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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