View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13040_low_57 (Length: 297)
Name: NF13040_low_57
Description: NF13040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13040_low_57 |
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Alignment Details
Target: chr6 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 14 - 285
Target Start/End: Original strand, 34038798 - 34039066
Alignment:
| Q |
14 |
taaaacttataaaagtgtaggatgaaattacatactttataggaagattgttcatgagctctgaaaaatcacataatgatccatttgaatgtgatgatga |
113 |
Q |
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| T |
34038798 |
taaaacatataaatatgtaggatgaaattacatacttcataggaagattgttcatgagctctgagaaatcacataatgatcctattgaatgtgatgatga |
34038897 |
T |
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| Q |
114 |
agaagaagaatcagcatcctcagtcaaatcagatgaacaagaacacatagaattatttgaatcttctgagaatgttccaatggatgttgttgaatcacta |
213 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34038898 |
ag---aagaatcagcatcctcagtcaaatcagatgaacaagaacacatagaattatttgaatcttctgagaatgttccaatggatgttgttgaatcacta |
34038994 |
T |
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| Q |
214 |
ttagtttccttaaccatccacttcatgtttcttgcactatcatcacccattattcccttcacattcatttca |
285 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34038995 |
ttagttttcttaaccatccacttcatgtttcttgcactatcatcacccattattcccttcacattcatttca |
34039066 |
T |
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