View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13040_low_80 (Length: 256)
Name: NF13040_low_80
Description: NF13040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13040_low_80 |
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Alignment Details
Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 32804995 - 32805241
Alignment:
| Q |
1 |
ccatgccagaagaacttcgataatttgccagtagtggacttagaaccttcctcttccctttccatttctaagtaatttccagcaacaacagtttcaactt |
100 |
Q |
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| T |
32804995 |
ccatgccagaagaacttagataatttgccagtagtggacttagaaccttcctcttccctttccatttctaagtaatttccagcaacaacagtttcaactt |
32805094 |
T |
|
| Q |
101 |
tctcagaagtcatttttattgtttttgttatctcccttaaagtgttttaagggaaagacaatagaattaagtgaacaaagatatatatagataggagaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32805095 |
tctcagaagtcatttttattgtttttgttatctcccttaaagtgttttaagggaaagacaatagaattaagtgaacaaagatatatatagataggagaag |
32805194 |
T |
|
| Q |
201 |
tgcttcttttcacactcctatatttcactttcacattaaagtattat |
247 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
32805195 |
tgcttcttttcacactcctatatttcactttcacattaaattattat |
32805241 |
T |
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