View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13040_low_97 (Length: 227)

Name: NF13040_low_97
Description: NF13040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13040_low_97
NF13040_low_97
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-221)||(90471-90691)
[»] chr3 (39 HSPs)
chr3 (1-221)||(4016038-4016258)
chr3 (1-221)||(4557299-4557519)
chr3 (7-225)||(53631784-53632002)
chr3 (1-221)||(34119532-34119750)
chr3 (1-221)||(42758248-42758468)
chr3 (2-221)||(830884-831102)
chr3 (1-221)||(22535835-22536056)
chr3 (1-218)||(54317018-54317235)
chr3 (131-221)||(52198159-52198249)
chr3 (1-221)||(23580701-23580921)
chr3 (22-221)||(44639168-44639368)
chr3 (1-164)||(31126846-31127009)
chr3 (7-221)||(48390811-48391025)
chr3 (72-218)||(44172568-44172717)
chr3 (72-218)||(44179268-44179417)
chr3 (131-221)||(7469772-7469862)
chr3 (131-221)||(29284340-29284430)
chr3 (124-221)||(23546936-23547033)
chr3 (1-221)||(19111609-19111828)
chr3 (7-221)||(17146144-17146359)
chr3 (72-217)||(34025896-34026044)
chr3 (131-221)||(39655267-39655357)
chr3 (131-221)||(49580068-49580158)
chr3 (22-215)||(49025575-49025768)
chr3 (1-146)||(30682695-30682840)
chr3 (131-221)||(44252751-44252841)
chr3 (131-221)||(44953429-44953519)
chr3 (1-217)||(34154291-34154504)
chr3 (131-217)||(48305639-48305725)
chr3 (136-221)||(23154059-23154143)
chr3 (136-221)||(29842317-29842401)
chr3 (125-226)||(30904805-30904905)
chr3 (136-221)||(52572618-52572703)
chr3 (72-193)||(39728613-39728737)
chr3 (175-221)||(42243435-42243481)
chr3 (136-221)||(10043276-10043361)
chr3 (137-206)||(43582588-43582656)
chr3 (1-49)||(41937168-41937216)
chr3 (1-49)||(48306703-48306751)
[»] chr1 (41 HSPs)
chr1 (1-221)||(34673276-34673496)
chr1 (1-221)||(29871279-29871499)
chr1 (1-219)||(12494885-12495103)
chr1 (1-166)||(49741056-49741221)
chr1 (1-221)||(17134821-17135042)
chr1 (1-221)||(44615469-44615690)
chr1 (1-221)||(44792879-44793100)
chr1 (72-221)||(19572506-19572658)
chr1 (1-215)||(16433167-16433375)
chr1 (1-221)||(9982884-9983104)
chr1 (7-219)||(24236757-24236970)
chr1 (7-225)||(29936296-29936515)
chr1 (72-221)||(36187214-36187366)
chr1 (137-221)||(16408953-16409037)
chr1 (1-227)||(35936817-35937031)
chr1 (1-221)||(45866179-45866400)
chr1 (131-225)||(28297939-28298033)
chr1 (72-221)||(51421801-51421953)
chr1 (136-221)||(23490765-23490850)
chr1 (136-221)||(50426655-50426740)
chr1 (1-217)||(18354078-18354295)
chr1 (151-221)||(33293525-33293595)
chr1 (131-221)||(49250767-49250857)
chr1 (164-225)||(48576108-48576169)
chr1 (1-221)||(42439664-42439885)
chr1 (136-207)||(3627993-3628064)
chr1 (136-219)||(5181049-5181132)
chr1 (106-217)||(34085215-34085326)
chr1 (1-90)||(44632264-44632350)
chr1 (131-221)||(34611078-34611168)
chr1 (136-196)||(34060044-34060104)
chr1 (1-221)||(40087458-40087678)
chr1 (175-221)||(13798287-13798333)
chr1 (136-221)||(10778561-10778646)
chr1 (118-221)||(16903515-16903618)
chr1 (131-218)||(23058471-23058558)
chr1 (151-209)||(24710872-24710930)
chr1 (110-212)||(48125686-48125788)
chr1 (1-91)||(34060146-34060234)
chr1 (180-220)||(2514811-2514851)
chr1 (1-49)||(13020562-13020610)
[»] chr4 (46 HSPs)
chr4 (1-219)||(1724307-1724525)
chr4 (1-221)||(6482030-6482251)
chr4 (1-218)||(37107291-37107507)
chr4 (1-175)||(37349003-37349177)
chr4 (1-183)||(19534335-19534517)
chr4 (1-221)||(26564711-26564931)
chr4 (1-212)||(12825465-12825676)
chr4 (131-221)||(21423871-21423961)
chr4 (7-221)||(47550348-47550563)
chr4 (131-221)||(6382267-6382357)
chr4 (131-221)||(7608980-7609070)
chr4 (131-221)||(11028083-11028173)
chr4 (131-221)||(44317545-44317635)
chr4 (131-221)||(5902609-5902699)
chr4 (131-221)||(11122864-11122954)
chr4 (72-217)||(31752404-31752552)
chr4 (94-216)||(32596184-32596306)
chr4 (1-148)||(7985189-7985337)
chr4 (112-221)||(14605920-14606029)
chr4 (131-227)||(25941148-25941244)
chr4 (137-209)||(55826630-55826702)
chr4 (1-215)||(9230164-9230376)
chr4 (1-149)||(13770522-13770670)
chr4 (1-218)||(39046832-39047049)
chr4 (1-116)||(425703-425818)
chr4 (131-221)||(1866544-1866634)
chr4 (131-221)||(31918553-31918643)
chr4 (136-221)||(10302099-10302184)
chr4 (131-215)||(21544589-21544673)
chr4 (131-219)||(42299800-42299886)
chr4 (136-215)||(3737791-3737870)
chr4 (131-214)||(29527822-29527905)
chr4 (131-218)||(47103748-47103835)
chr4 (22-217)||(47239384-47239580)
chr4 (131-221)||(15987257-15987347)
chr4 (9-196)||(32585375-32585564)
chr4 (136-218)||(48459496-48459578)
chr4 (118-218)||(19883054-19883154)
chr4 (131-215)||(25298834-25298918)
chr4 (152-196)||(36306816-36306860)
chr4 (110-170)||(42907875-42907935)
chr4 (186-221)||(1724264-1724299)
chr4 (110-221)||(12075626-12075737)
chr4 (172-218)||(43309534-43309580)
chr4 (1-45)||(28695313-28695357)
chr4 (1-49)||(29755497-29755545)
[»] scaffold0036 (1 HSPs)
scaffold0036 (9-221)||(33275-33487)
[»] chr7 (50 HSPs)
chr7 (1-218)||(5376964-5377181)
chr7 (1-221)||(12980255-12980476)
chr7 (7-215)||(26622836-26623044)
chr7 (1-215)||(3920417-3920631)
chr7 (1-220)||(18825867-18826086)
chr7 (1-221)||(27850320-27850540)
chr7 (1-221)||(16078892-16079112)
chr7 (1-212)||(25782910-25783121)
chr7 (1-221)||(41103531-41103755)
chr7 (1-221)||(2630568-2630788)
chr7 (7-219)||(30650515-30650728)
chr7 (7-221)||(7779892-7780107)
chr7 (12-215)||(26004474-26004675)
chr7 (1-196)||(24425260-24425454)
chr7 (1-206)||(44734366-44734572)
chr7 (1-163)||(5916122-5916280)
chr7 (136-221)||(10072480-10072565)
chr7 (136-217)||(45380121-45380202)
chr7 (72-221)||(25905575-25905727)
chr7 (72-217)||(16866116-16866264)
chr7 (1-221)||(37579141-37579360)
chr7 (1-217)||(38139790-38140008)
chr7 (73-221)||(38152835-38152986)
chr7 (1-220)||(46127179-46127394)
chr7 (72-218)||(3226943-3227092)
chr7 (131-221)||(35074479-35074569)
chr7 (72-221)||(45885759-45885911)
chr7 (136-221)||(21702673-21702758)
chr7 (1-209)||(25979923-25980132)
chr7 (141-221)||(39456009-39456089)
chr7 (137-221)||(41741444-41741527)
chr7 (93-209)||(43507416-43507532)
chr7 (131-219)||(44845131-44845219)
chr7 (131-218)||(18125225-18125312)
chr7 (94-212)||(16811702-16811819)
chr7 (118-215)||(23475263-23475360)
chr7 (131-227)||(3157092-3157188)
chr7 (1-49)||(26004687-26004735)
chr7 (131-218)||(32546201-32546288)
chr7 (72-217)||(17885412-17885560)
chr7 (131-221)||(22973397-22973487)
chr7 (72-192)||(44794051-44794173)
chr7 (137-221)||(8906583-8906667)
chr7 (131-219)||(31426017-31426105)
chr7 (153-219)||(11472710-11472776)
chr7 (151-217)||(24753193-24753258)
chr7 (151-221)||(42908035-42908105)
chr7 (118-215)||(23533604-23533700)
chr7 (136-193)||(45708887-45708944)
chr7 (1-49)||(44986065-44986113)
[»] chr2 (33 HSPs)
chr2 (1-215)||(6027889-6028104)
chr2 (1-225)||(13705351-13705576)
chr2 (1-206)||(14540660-14540861)
chr2 (1-217)||(31942183-31942400)
chr2 (1-206)||(45256697-45256903)
chr2 (1-221)||(19104831-19105055)
chr2 (72-221)||(37999426-37999578)
chr2 (136-221)||(37106702-37106787)
chr2 (131-221)||(10208424-10208514)
chr2 (131-221)||(30846951-30847041)
chr2 (111-221)||(35248379-35248489)
chr2 (131-218)||(9632391-9632478)
chr2 (72-193)||(8915959-8916083)
chr2 (131-221)||(24414126-24414216)
chr2 (131-192)||(42798011-42798072)
chr2 (7-221)||(44746103-44746318)
chr2 (136-227)||(22900804-22900895)
chr2 (131-221)||(13830741-13830830)
chr2 (93-217)||(7314646-7314770)
chr2 (137-221)||(12193821-12193905)
chr2 (118-221)||(35510437-35510540)
chr2 (137-196)||(45115569-45115628)
chr2 (1-47)||(37319816-37319862)
chr2 (136-221)||(37472753-37472838)
chr2 (7-163)||(10920525-10920682)
chr2 (131-215)||(14331532-14331616)
chr2 (137-220)||(3547177-3547260)
chr2 (178-221)||(12341652-12341695)
chr2 (131-221)||(36128100-36128190)
chr2 (172-221)||(15546790-15546839)
chr2 (110-215)||(35965319-35965423)
chr2 (1-91)||(16226854-16226941)
chr2 (1-49)||(37472896-37472944)
[»] chr8 (40 HSPs)
chr8 (1-219)||(24568813-24569030)
chr8 (1-221)||(1012491-1012712)
chr8 (1-221)||(20399465-20399686)
chr8 (1-215)||(17469129-17469343)
chr8 (1-210)||(43113631-43113840)
chr8 (1-221)||(27932286-27932507)
chr8 (1-221)||(1063380-1063601)
chr8 (1-215)||(36131917-36132130)
chr8 (1-218)||(45235938-45236156)
chr8 (1-165)||(34139321-34139485)
chr8 (5-221)||(34776943-34777160)
chr8 (93-221)||(40248365-40248493)
chr8 (131-221)||(24927953-24928043)
chr8 (108-218)||(30481418-30481528)
chr8 (131-221)||(32303065-32303155)
chr8 (75-215)||(14186265-14186408)
chr8 (136-221)||(29108816-29108901)
chr8 (136-221)||(39445570-39445655)
chr8 (108-215)||(5700337-5700444)
chr8 (118-221)||(14687390-14687493)
chr8 (1-221)||(24870018-24870238)
chr8 (124-217)||(27056553-27056646)
chr8 (1-91)||(35215378-35215465)
chr8 (151-221)||(4230724-4230794)
chr8 (1-162)||(34021352-34021511)
chr8 (140-221)||(17220725-17220806)
chr8 (161-221)||(5858646-5858706)
chr8 (110-221)||(8545343-8545454)
chr8 (146-221)||(35215555-35215629)
chr8 (131-221)||(27777192-27777282)
chr8 (7-91)||(29089589-29089670)
chr8 (131-221)||(37960956-37961046)
chr8 (136-183)||(2075867-2075914)
chr8 (72-204)||(11255019-11255153)
chr8 (151-221)||(6388510-6388580)
chr8 (179-221)||(14155584-14155626)
chr8 (110-196)||(30904029-30904115)
chr8 (8-49)||(14186205-14186246)
chr8 (110-219)||(28345474-28345583)
chr8 (1-49)||(40248514-40248562)
[»] chr6 (35 HSPs)
chr6 (1-215)||(14505960-14506174)
chr6 (12-221)||(12678088-12678297)
chr6 (1-215)||(24602856-24603070)
chr6 (1-215)||(7393887-7394101)
chr6 (1-149)||(14032430-14032578)
chr6 (136-218)||(32532549-32532631)
chr6 (72-217)||(32853786-32853934)
chr6 (73-221)||(5863377-5863528)
chr6 (1-217)||(30816131-30816348)
chr6 (1-221)||(2367199-2367420)
chr6 (1-91)||(14410960-14411047)
chr6 (1-221)||(14254832-14255051)
chr6 (130-221)||(28079690-28079781)
chr6 (7-221)||(10142512-10142727)
chr6 (95-221)||(12141353-12141479)
chr6 (139-221)||(15498336-15498418)
chr6 (72-221)||(24225640-24225792)
chr6 (120-204)||(14410865-14410950)
chr6 (22-219)||(27738666-27738864)
chr6 (138-226)||(9442441-9442529)
chr6 (24-217)||(11762342-11762535)
chr6 (110-221)||(256486-256597)
chr6 (131-221)||(3483917-3484007)
chr6 (131-221)||(27534688-27534778)
chr6 (110-219)||(13769055-13769164)
chr6 (130-219)||(20349067-20349156)
chr6 (110-215)||(32959844-32959948)
chr6 (72-221)||(12309514-12309666)
chr6 (131-221)||(32053092-32053182)
chr6 (94-221)||(10188074-10188194)
chr6 (146-215)||(14034521-14034590)
chr6 (1-91)||(14245121-14245208)
chr6 (158-221)||(30986284-30986347)
chr6 (105-217)||(19366987-19367099)
chr6 (1-49)||(32052930-32052978)
[»] scaffold0294 (1 HSPs)
scaffold0294 (1-221)||(14649-14869)
[»] chr5 (41 HSPs)
chr5 (1-221)||(2412721-2412941)
chr5 (9-215)||(38006470-38006676)
chr5 (1-154)||(27088414-27088566)
chr5 (1-215)||(2985021-2985235)
chr5 (1-221)||(18206891-18207112)
chr5 (1-191)||(12447255-12447445)
chr5 (1-191)||(35194014-35194204)
chr5 (1-166)||(30115357-30115522)
chr5 (1-146)||(3573098-3573243)
chr5 (1-217)||(4582992-4583209)
chr5 (1-219)||(28045528-28045747)
chr5 (72-217)||(4920768-4920916)
chr5 (7-221)||(40517685-40517900)
chr5 (1-196)||(35311696-35311891)
chr5 (1-225)||(42717627-42717847)
chr5 (1-221)||(6155915-6156134)
chr5 (1-203)||(8453386-8453587)
chr5 (1-221)||(17853288-17853507)
chr5 (7-221)||(42987474-42987689)
chr5 (6-175)||(6092559-6092729)
chr5 (131-219)||(38972926-38973014)
chr5 (130-217)||(20973495-20973582)
chr5 (72-221)||(22694897-22695048)
chr5 (136-221)||(12834569-12834654)
chr5 (9-221)||(30996477-30996690)
chr5 (1-183)||(1218630-1218811)
chr5 (130-213)||(27900404-27900487)
chr5 (72-221)||(5908683-5908835)
chr5 (131-221)||(12915477-12915567)
chr5 (131-221)||(28569016-28569106)
chr5 (106-221)||(10127060-10127168)
chr5 (136-221)||(12866546-12866631)
chr5 (136-209)||(15890216-15890288)
chr5 (137-217)||(16311292-16311372)
chr5 (146-217)||(33728000-33728071)
chr5 (131-221)||(2681220-2681310)
chr5 (139-221)||(13401999-13402081)
chr5 (179-221)||(24207736-24207778)
chr5 (136-221)||(23044986-23045071)
chr5 (136-221)||(29245946-29246031)
chr5 (1-49)||(3564895-3564943)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-213)||(197329-197541)
[»] scaffold0005 (1 HSPs)
scaffold0005 (112-221)||(211349-211458)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-215)||(36030-36242)
[»] scaffold0013 (1 HSPs)
scaffold0013 (131-218)||(128118-128205)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-49)||(14311-14359)
[»] scaffold0097 (1 HSPs)
scaffold0097 (1-49)||(33457-33505)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-49)||(6280-6328)
[»] scaffold0519 (1 HSPs)
scaffold0519 (72-204)||(10240-10374)
[»] scaffold0184 (1 HSPs)
scaffold0184 (131-221)||(2973-3063)
[»] scaffold0198 (1 HSPs)
scaffold0198 (131-212)||(20742-20823)
[»] scaffold0189 (1 HSPs)
scaffold0189 (1-49)||(4130-4178)


Alignment Details
Target: scaffold0022 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 90471 - 90691
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   || |||||| |||||||||||||||||||||||||||||   ||||||    
T  90471 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaat---ggttgttttaataacacatcaattattaaacaaaataacatggcatat 90567  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||     
T  90568 caacataaaataattttctgcattcaggacgaatttgtgtatgggttcggggagggtaccaatatacccgttaaccgtctcatacccgtgttttgaaatc 90667  T
Q  198 gggaaaaacccaaacccataccca 221  Q
    ||| |||||||| ||||| |||||    
T  90668 ggggaaaacccatacccaaaccca 90691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 3e-47; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4016258 - 4016038
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catat 97  Q
    ||||| |||||||||||||||| ||||| ||||||||||||||||| ||| | |   ||||||||||||||||||||| ||||||||||||    |||||    
T  4016258 tttaacatttgttagaccgatttatttagttgctcctttaaatatcgatagtag---tttttataacacatcaattatcaaacaaaataacatgacatat 4016162  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| |   || |||||||||||| |||||| |||| |||||||||||| | |||||||||||||||| ||| ||||| ||||||  |||||||||||     
T  4016161 caacataaggtagttttctgcattcgggacgagtttgggtatgggttcggagtgggtacctatatacccgttatccgtcccatacccatgttttgaaatc 4016062  T
Q  198 gggaaaaacccaaacccataccca 221  Q
    ||| ||||||||||||||||||||    
T  4016061 ggggaaaacccaaacccataccca 4016038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4557519 - 4557299
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||||||   |  |||||||||||||||||||||| ||||||||||||    |||||    
T  4557519 tttaacatttgttagaccgatttatttagttgctcctttaaatatcaata---gtagtttttataacacatcaattatcaaacaaaataacatgacatat 4557423  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | ||||||||||||||| |||   ||||| |||||||||||||| |||||||||||||| | ||| ||||| ||||||  ||||||||||      
T  4557422 caacataaagtaattttctgcattcgggatagatttgggtatgggttcggggtgggtacctatatactcgttacccgtcccatacccatgttttgaaaac 4557323  T
Q  198 gggaaaaacccaaacccataccca 221  Q
    ||| ||||||||||||||||||||    
T  4557322 ggggaaaacccaaacccataccca 4557299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 7 - 225
Target Start/End: Original strand, 53631784 - 53632002
Alignment:
Q  7 atttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatatcaacac 103  Q
    ||||||||||||||| |||||| ||||||||||||||||||||   ||  |||||||||||||  ||||||| ||||||||||||   |||||||||||     
T  53631784 atttgttagaccgatcgatttagttgctcctttaaatatcaat---ggtagtttttataacacggcaattatcaaacaaaataacatggcatatcaacat 53631880  T
Q  104 ataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaa 203  Q
    | | |||||||||  |||| |||||| |||| |||||||||||||| |||||||||||||||| ||| |||||||||||  ||||||| ||||| || ||    
T  53631881 aaagtaattttctagattcgggacgagtttgagtatgggttcggggtgggtacctatatacccgttacccgtctcatacacgtgttttaaaatttgggaa 53631980  T
Q  204 aacccaaacccatacccatacc 225  Q
    ||| |||||||||||| |||||    
T  53631981 aactcaaacccatacctatacc 53632002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 34119532 - 34119750
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg-catatca 99  Q
    ||||| |||||||||||||||||||||| |||||| ||| |||||||||  | |   ||||||||||||  ||||||| ||||||||||| | |||||||    
T  34119532 tttaacatttgttagaccgattgatttagttgctcatttcaatatcaatgttag---tttttataacacgacaattatcaaacaaaataatggcatatca 34119628  T
Q  100 acacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgg 199  Q
    ||||| | || |||||||||||  ||||| ||||| |||||||||||||| |||||||||||||||  ||| |||||||||||| ||||||| |||| ||    
T  34119629 acacaaagtagttttctgcatttgggacggatttgggtatgggttcggggtgggtacctatatacctgttatccgtctcatacccgtgttttaaaatcgg 34119728  T
Q  200 gaaaaacccaaacccataccca 221  Q
    ||||||| ||||| ||||||||    
T  34119729 gaaaaactcaaactcataccca 34119750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 42758248 - 42758468
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| ||||||||||||| |||||||| |||||||||||||||||||| || |   |||||||||||   ||||||| ||||||||||||   ||||||    
T  42758248 tttaacatttgttagaccggttgatttaattgctcctttaaatatcaatgatag---tttttataacatggcaattatcaaacaaaataacatggcatat 42758344  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | ||||||||| | ||| |||||  |||| |||||||||||||| |  ||||||||||||  ||| ||||| |||||||||||||||||||     
T  42758345 caacataaagtaattttcttcgttcgggacgggtttgggtatgggttcggggtgcatacctatatacctgttacccgtcccatacctgtgttttgaaatc 42758444  T
Q  198 gggaaaaacccaaacccataccca 221  Q
    |||  |||||||||| ||||||||    
T  42758445 gggggaaacccaaactcataccca 42758468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 221
Target Start/End: Original strand, 830884 - 831102
Alignment:
Q  2 ttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatatc 98  Q
    |||| |||| ||||||| ||||||||| || |||||| |||||||||| || |   ||||||||| ||  ||||||| ||||||||||||   ||||||     
T  830884 ttaacattttttagaccaattgatttagtttctccttaaaatatcaatgatag---tttttataagacggcaattatcaaacaaaataacatagcatatt 830980  T
Q  99 aacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattg 198  Q
    |||| | | ||||||||||||||| ||||||||||| |||||||||| ||| ||||||| |||||| | ||| |||||||||||| |||||||||||  |    
T  830981 aacataaagtaattttctgcattcgggacgaatttgggtatgggttcagggtgggtacc-atatactcgttatccgtctcatacccgtgttttgaaaacg 831079  T
Q  199 ggaaaaacccaaacccataccca 221  Q
    ||||| ||||| ||||| |||||    
T  831080 ggaaatacccatacccaaaccca 831102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 22536056 - 22535835
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---cata 96  Q
    ||||| ||||||||||| || ||||||| ||| ||||||||||||||||   ||  |||||||| ||||   ||||||| ||||||||||||    ||||    
T  22536056 tttaacatttgttagacagaatgatttagttgatcctttaaatatcaat---ggtagtttttattaacatgacaattatcaaacaaaataacatgacata 22535960  T
Q  97 tcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    |||||| | ||||||||| | |||| ||||||| | ||||||||||||||||| |||| ||| ||||||| ||| ||||| |||| | ||||||||||||    
T  22535959 tcaacataaaataattttttacatttaggacgagtatgtgtatgggttcggggtgggtgcctgtatacccgttacccgtcccatatccgtgttttgaaat 22535860  T
Q  197 tgggaaaaacccaaacccataccca 221  Q
    |||| ||||| || |||||||||||    
T  22535859 tggggaaaactcatacccataccca 22535835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 54317018 - 54317235
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||   |||||||| |||||||||||||||||||||   |  |||||||||||||  ||||||| ||||||||||||   ||||||    
T  54317018 tttaacatttgttagacatgttgatttagttgctcctttaaatatcaata---gtagtttttataacacggcaattatcaaacaaaataacatggcatat 54317114  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | ||||||||| | ||  |||||  |||| | |||||||||||| |||||||||||||||| ||| |||||  |||| |||||||||||||     
T  54317115 caacataaagtaattttcttcgtttgggacgggtttgggaatgggttcggggtgggtacctatatacccgttacccgtcctatacttgtgttttgaaatc 54317214  T
Q  198 gggaaaaacccaaacccatac 218  Q
    ||| ||||| ||||| |||||    
T  54317215 ggggaaaactcaaacacatac 54317235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 52198159 - 52198249
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| |||||||||||||||| ||| ||||| |||||||||||||||| || |||||||||||| |||||||||||    
T  52198159 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgttttgagatcgggaaaaacccatacccataccca 52198249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 23580701 - 23580921
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg--catat 97  Q
    ||||| |||||||| || || ||||||| ||| ||||||||||||||||| | |   ||||||| ||||   ||||||| ||||||||||||   |||||    
T  23580701 tttaacatttgttatacggaatgatttagttgatcctttaaatatcaatagtag---tttttattaacatgacaattatcaaacaaaataacatacatat 23580797  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | ||||||||| | ||||  |||  | | || |||||||||||| | |||||||||||||||| ||| |||| ||||||  |||||||||||||    
T  23580798 caacataaaataattttttacatttgggataagtgtgggtatgggttcggagtgggtacctatatacccgttacccgtttcatactcgtgttttgaaatt 23580897  T
Q  198 gggaaaaacccaaacccataccca 221  Q
    ||| ||||| || |||||||||||    
T  23580898 ggggaaaactcatacccataccca 23580921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 221
Target Start/End: Original strand, 44639168 - 44639368
Alignment:
Q  22 tgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---catatcaacacataataattttctg 117  Q
    ||||||| ||| ||||||||||||||||   ||  |||||||| ||||   ||||||| ||||||||||||    |||||||||| | ||||||||| |     
T  44639168 tgatttagttgatcctttaaatatcaat---ggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaataatttttta 44639264  T
Q  118 cattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    ||||  | |||  |||| |||||||||||||| |||||||||||||||| ||| ||||| |||||| ||||||||| ||  || |||||||| |||||||    
T  44639265 catttggaacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatatgggaaaacccatacccata 44639364  T
Q  218 ccca 221  Q
    ||||    
T  44639365 ccca 44639368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 31127009 - 31126846
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| ||||||||||| |||||||||| |||||||||| |||||||||  | |   ||||||||| ||  ||||||| ||||||||||||   ||||||    
T  31127009 tttaacatttgttagactgattgatttagttgctcctttcaatatcaatgttag---tttttataatacgacaattatcaaacaaaataacatggcatat 31126913  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatac 164  Q
    |||||||   || |||||||||||  |||||| |||| ||||| |||||||| || |||||||||||    
T  31126912 caacacaatgtagttttctgcatttgggacgagtttgggtatgagttcggggtggatacctatatac 31126846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 221
Target Start/End: Complemental strand, 48391025 - 48390811
Alignment:
Q  7 atttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catatcaacac 103  Q
    ||||||||||| || ||||||| ||| || |||||||||||||   ||  |||||| |||||   ||||||| ||||||||||||    ||||||||||     
T  48391025 atttgttagacggaatgatttagttgatcttttaaatatcaat---ggtagtttttttaacatgacaattatcaaacaaaataacatgacatatcaacat 48390929  T
Q  104 ataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaa 203  Q
    | | ||||||| | | ||| |||||  | || |||||||||| ||  |||||||||||| ||| ||| ||||| |||||| |||||||||||| ||| ||    
T  48390928 aaagtaattttttacgttcgggacgggtatgggtatgggttcaggatgggtacctatattcccgttacccgtcccatacccgtgttttgaaatcggggaa 48390829  T
Q  204 aacccaaacccataccca 221  Q
    |||||| |||||||||||    
T  48390828 aacccatacccataccca 48390811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 218
Target Start/End: Original strand, 44172568 - 44172717
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | | ||||||| | ||||  |||||  |||| |||||||||||||| |||||| ||||||||| |    
T  44172568 caattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgt 44172667  T
Q  169 taaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatac 218  Q
    || ||||| |||||| ||||||||| || ||| |||||||| ||||||||    
T  44172668 tacccgtcccatacccgtgttttgagatcggggaaaacccatacccatac 44172717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 218
Target Start/End: Original strand, 44179268 - 44179417
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | | ||||||| | ||||  |||||  |||| |||||||||||||| |||||| ||||||||| |    
T  44179268 caattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgt 44179367  T
Q  169 taaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatac 218  Q
    || ||||| |||||| ||||||||| || ||| |||||||| ||||||||    
T  44179368 tacccgtcccatacccgtgttttgagatcggggaaaacccatacccatac 44179417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 7469862 - 7469772
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||||||||||||||||| |||||||||||||||| ||| ||||| |||||| |||||| || ||  || |||||||| |||||||||||    
T  7469862 tttgtgtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcagggaaaacccatacccataccca 7469772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 29284340 - 29284430
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||  |||||||||||||||| ||| ||||| |||||| |||||| || || |||||||||||| |||||||||||    
T  29284340 tttgggtatgggttcgggctgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgggaaaaacccatacccataccca 29284430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 23547033 - 23546936
Alignment:
Q  124 ggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||| |||| |||||||||||||| |||||||||||||||| ||| ||||| |||||| |||||| || || ||| |||||||| ||||| |||||    
T  23547033 ggacgagtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccaaaccca 23546936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 19111609 - 19111828
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||| ||| ||||||||| || ||||||||||||||   |||||  |||||||||||||   |||||| ||||||||||||    |||||    
T  19111609 tttaacatttgttataccaattgatttagttactcctttaaatatc---aatggtagtttttataacacgaaaattatcaaacaaaataacatgacatat 19111705  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
     |||| | | ||||||||| ||||  | |||  |||| | |||||||  ||| |||||| ||||||||| ||| || || | |||| ||||||||||||     
T  19111706 -aacataaagtaattttctacattttgtacgggtttgggcatgggtttagggtgggtacttatatacccgttatccatcccgtacccgtgttttgaaatc 19111804  T
Q  198 gggaaaaacccaaacccataccca 221  Q
    ||||||||| ||||| ||||||||    
T  19111805 gggaaaaactcaaactcataccca 19111828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 221
Target Start/End: Complemental strand, 17146359 - 17146144
Alignment:
Q  7 atttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---catatcaaca 102  Q
    |||||||||||  | ||||||| ||| |||||||||||||||| || |   ||||||| ||||   ||||||| ||||||||||||    ||||||||||    
T  17146359 atttgttagacaaaatgatttagttgatcctttaaatatcaatgatag---tttttattaacatgacaattatcaaacaaaataacataacatatcaaca 17146263  T
Q  103 cataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaa 202  Q
     | | ||||||| | ||||  ||| |  ||||||||||||||||||| || |||||||||| |  ||| ||||  ||||||  |||||||| ||||| ||    
T  17146262 taaagtaattttttacatttgggaagggtttgtgtatgggttcggggtggatacctatataactgttacccgttccatacccatgttttgagattggaaa 17146163  T
Q  203 aaacccaaacccataccca 221  Q
    ||||||| |||||||||||    
T  17146162 aaacccatacccataccca 17146144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 217
Target Start/End: Original strand, 34025896 - 34026044
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | ||||||||| | ||||  |||||  | || ||||| |||||||| ||  |||||||||| | |    
T  34025896 caattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggacgggtatgggtatgagttcggggtggaaacctatatactcgt 34025995  T
Q  169 taaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    || ||||| ||||||||||||||||||| ||| |||||||| |||||||    
T  34025996 tacccgtcccatacctgtgttttgaaatcggggaaaacccatacccata 34026044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 39655357 - 39655267
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| ||||||||| |||| |||||||||||||||  ||| ||||| |||||| ||||||||| || ||| |||||||| |||||||||||    
T  39655357 tttgggtatgggtttggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccataccca 39655267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 49580068 - 49580158
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| ||||||||||| || |||||||||||||| | ||| ||||| |||||| ||||||||| || ||| |||||||| |||||||||||    
T  49580068 tttgagtatgggttcgaggtgggtacctatatactcgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccataccca 49580158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 215
Target Start/End: Original strand, 49025575 - 49025768
Alignment:
Q  22 tgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---catatcaacacataataattttctg 117  Q
    ||||||| ||| ||||||||||||||||   ||  |||||||| |||| | ||||||| ||||||||||||    |||||||||||| | ||||||| |     
T  49025575 tgatttagttgatcctttaaatatcaat---ggtagtttttattaacataacaattatcaaacaaaataacataacatatcaacacaaagtaatttttta 49025671  T
Q  118 cattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaaccca 215  Q
    ||||  |||||  |||| ||||||||||||   | |||||||||||||  ||| ||||| |||||| ||||||||| || ||| ||||||||||||||    
T  49025672 catttgggacgggtttgggtatgggttcggat-gtgtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaacccaaaccca 49025768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 30682695 - 30682840
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||| ||| ||||||| |||||||||||||||||||| ||    ||||||||||||   | ||||| ||||||||||||    |||||    
T  30682695 tttaacatttgttagaacgaatgatttaattgctcctttaaatatcaatgat---agtttttataacatgaccattatcaaacaaaataacatgacatat 30682791  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcg 146  Q
    ||||| | | ||||||||| |||||||||||  |||| |||| ||||||    
T  30682792 caacataaagtaattttctacattcaggacgggtttgagtataggttcg 30682840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 44252751 - 44252841
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| |||||||||||||||  |||  |||| |||||| |||||| || || ||| |||||||| |||||||||||    
T  44252751 tttgggtatgggttcggggtgggtacctatatacctgttacacgtcccatacccgtgtttcgagatcggggaaaacccatacccataccca 44252841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 44953519 - 44953429
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| ||||| |||||||| | |||||||||||||| ||| ||||| |||||| ||||||||| || ||| |||||||| ||||| |||||    
T  44953519 tttgagtatgagttcggggtgagtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccaaaccca 44953429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 34154291 - 34154504
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacgcatatca 99  Q
    |||||||||||||||||  | ||||||| ||| ||||||||||||||||   ||  |||||||| ||||   ||||||| ||||||||||||  ||||||    
T  34154291 tttaatatttgttagacataatgatttagttgatcctttaaatatcaat---ggtagtttttattaacatgacaattatcaaacaaaataac--atatca 34154385  T
Q  100 acacataataattttctg-cattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattg 198  Q
    ||| | | ||||||| |  ||||  |||||  | || |||||||||||||| |||||||||||| |   ||| |||| |||||||  ||||||||||| |    
T  34154386 acataaagtaatttttttacatttgggacgggtatgggtatgggttcggggtgggtacctatattcttgttacccgtttcatacccatgttttgaaatcg 34154485  T
Q  199 ggaaaaacccaaacccata 217  Q
    || ||||| || |||||||    
T  34154486 gggaaaacacatacccata 34154504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 48305725 - 48305639
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    |||| |||| ||||||||| ||||||||||||||||  ||  |||  |||||| |||||||||||||||| ||||| || |||||||    
T  48305725 tttgggtataggttcggggtgggtacctatatacccgatactcgttccatacccgtgttttgaaattggggaaaactcatacccata 48305639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 23154143 - 23154059
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||||| | |||||||||||||| | ||| ||||  |||||| ||| |||||||| ||| |||||||| |||||||||||    
T  23154143 gtatgggttcggagtgggtacctatatactcgttacccgttccatacccgtg-tttgaaatcggggaaaacccatacccataccca 23154059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 29842317 - 29842401
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||||||| |||||||||||| ||| ||| | ||| |||||| ||||||| |||| ||| |||||||| ||| |||||||    
T  29842317 gtatgggttcggggtgggtacctatattcccgttaccagtcccatacccgtgttttaaaatcggg-aaaacccatacctataccca 29842401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 30904905 - 30904805
Alignment:
Q  125 gacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatacccatac 224  Q
    |||| ||||| |||||||||||||| |||||||||||| |||  || ||||| | |||| ||||||||||||  | ||||| |||||| |||||||| ||    
T  30904905 gacggatttgggtatgggttcggggtgggtacctatat-ccccgtacccgtcccgtacccgtgttttgaaatcagaaaaaagccaaactcatacccaaac 30904807  T
Q  225 ca 226  Q
    ||    
T  30904806 ca 30904805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 52572618 - 52572703
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||| ||||||| |||| ||||||||||| ||| ||||| |||||| ||||||||| || | | ||||| || |||||||||||    
T  52572618 gtatggattcggggtgggtccctatatacccgttacccgtcccatacccgtgttttgagatcgaggaaaactcatacccataccca 52572703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 193
Target Start/End: Original strand, 39728613 - 39728737
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | | ||||||| | ||||  |||||  |||| |||||||||||||| |||||| ||||||||| |    
T  39728613 caattatcaaacaaaataacattacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgt 39728712  T
Q  169 taaccgtctcatacctgtgttttga 193  Q
    || || || |||||| || ||||||    
T  39728713 tacccatcccatacccgtattttga 39728737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 42243435 - 42243481
Alignment:
Q  175 tctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||||||| |||| ||||||| ||||||||||||||| ||||||||    
T  42243435 tctcatacccgtgtattgaaatcgggaaaaacccaaactcataccca 42243481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 10043361 - 10043276
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||||||| |||| | ||||  ||| ||| ||||| ||||||  ||||||||||   || ||||||||||||||||||||    
T  10043361 gtatgggttcggggtgggtgcatataaccccgttacccgtcccatacccatgttttgaaaccagggaaaacccaaacccataccca 10043276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 43582588 - 43582656
Alignment:
Q  137 tatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaac 206  Q
    ||||||||||||  ||||||||| |||| | ||| |||||||||||| |||||||||||| ||| |||||    
T  43582588 tatgggttcgggt-gggtacctacatacacgttacccgtctcatacccgtgttttgaaatcggggaaaac 43582656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41937216 - 41937168
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaat 49  Q
    ||||| |||||||||||||||||||||| ||| || ||| |||||||||    
T  41937216 tttaacatttgttagaccgattgatttagttgttcatttcaatatcaat 41937168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48306751 - 48306703
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaat 49  Q
    ||||||||||||||||| || ||||||| ||| | ||||||||||||||    
T  48306751 tttaatatttgttagacggaatgatttagttgatactttaaatatcaat 48306703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 34673496 - 34673276
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||   ||  |||||||||||||  ||||||| ||||||||||||   ||||||    
T  34673496 tttaacatttgttagaccggttgatttagttgctcctttaaatatcaat---ggtagtttttataacacggcaattatcaaacaaaataacatggcatat 34673400  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | || |||||| | ||| | ||   |||| |||||||||||||| |||||||||||||||| ||| | |||||||||| |||||||||||||    
T  34673399 caacataaagtagttttcttcgttcggaacaggtttgggtatgggttcggggtgggtacctatatacccgttaccagtctcatacccgtgttttgaaatt 34673300  T
Q  198 gggaaaaacccaaacccataccca 221  Q
    ||||||||||||||||||||||||    
T  34673299 gggaaaaacccaaacccataccca 34673276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 29871499 - 29871279
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catat 97  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||   ||  ||||||||||||    |||||| ||||||||||||    |||||    
T  29871499 tttaatatttgttagaccgattgatgtagttgctcctttaaatatcaat---ggtagtttttataacatgggaattatcaaacaaaataacatgacatat 29871403  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | ||||||||||| ||||| |||||  |||| ||||| |||| ||| |||||||||||||||  ||| | ||| ||||||  |||||||||||     
T  29871402 caacataaaataattttctacattcgggacgggtttgggtatgagttcagggtgggtacctatataccagttacctgtcccatacccatgttttgaaatc 29871303  T
Q  198 gggaaaaacccaaacccataccca 221  Q
    ||  ||||||||||| ||||||||    
T  29871302 ggagaaaacccaaactcataccca 29871279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 12494885 - 12495103
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catat 97  Q
    ||||| |||||||||||||||  ||||| |||||||||||||||||| |   ||  |||||||||||||  ||||||| ||||||||||||    ||| |    
T  12494885 tttaacatttgttagaccgataaatttagttgctcctttaaatatcagt---ggtagtttttataacacgccaattataaaacaaaataacatgtcatgt 12494981  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| ||| || |||||| ||||  |||||  |||| ||||||||||| || |||||||||||||||| |||  |||| |||| | ||||||||||||     
T  12494982 caacatatagtagttttctacatttgggacgggtttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatccgtgttttgaaatc 12495081  T
Q  198 gggaaaaacccaaacccatacc 219  Q
    |||||||||| |||||||||||    
T  12495082 gggaaaaaccaaaacccatacc 12495103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 49741221 - 49741056
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||| ||||||| ||||| |||||||||||||||||||||   |  |||||||||||||||||||||| ||||||||||||    |||||    
T  49741221 tttaacatttgttaaaccgatttatttagttgctcctttaaatatcaata---gtagtttttataacacatcaattatcaaacaaaataacataacatat 49741125  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatataccc 166  Q
     |||| | | || |||||||||||| |||||  |||| |||||||||||||| ||||||||||||||||    
T  49741124 taacataaagtagttttctgcattcgggacgggtttgggtatgggttcggggtgggtacctatataccc 49741056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 17134821 - 17135042
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---cata 96  Q
    ||||| |||||||||||  | ||||||| ||| ||||||||||||||||   ||  |||||||| ||||   ||||||| ||||||||||||    ||||    
T  17134821 tttaacatttgttagacgaaatgatttagttgatcctttaaatatcaat---ggtagtttttattaacatgacaattatcaaacaaaataacatgacata 17134917  T
Q  97 tcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    |||||| | | ||||||| | |||   |||||| | || ||||||||||||||| ||||||||||||||| ||| |||||||||||| ||||||||||||    
T  17134918 tcaacataaagtaattttttacatatgggacgagtatgggtatgggttcggggatggtacctatatacccgttacccgtctcatacccgtgttttgaaat 17135017  T
Q  197 tgggaaaaacccaaacccataccca 221  Q
     ||| |||||||| ||||| |||||    
T  17135018 cggggaaaacccatacccacaccca 17135042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 44615690 - 44615469
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||||||||||||| || ||||||||||||||||||||    |||||||||||||  ||||||| ||||||||||||   ||||||    
T  44615690 tttaacatttgttagaccgattgatttagtttctcctttaaatatcaataat---agtttttataacacgacaattatcaaacaaaataacatggcatat 44615594  T
Q  98 caacacataata-attttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    ||| | | | ||  |||| || |||  |||||  |||| ||||| ||| |||| |||||||||||||||  ||| ||||| |||||| ||||||| ||||    
T  44615593 caagataaagtagtttttttggatttgggacgggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaat 44615494  T
Q  197 tgggaaaaacccaaacccataccca 221  Q
      || ||||||||||| ||||||||    
T  44615493 cagggaaaacccaaactcataccca 44615469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 44792879 - 44793100
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||||||||||||| || ||||||||||||||||||||    |||||||||||||  ||||||| ||||||||||||   ||||||    
T  44792879 tttaacatttgttagaccgattgatttagtttctcctttaaatatcaataat---agtttttataacacgacaattatcaaacaaaataacatggcatat 44792975  T
Q  98 caacacataata-attttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    ||| | | | ||  |||| || |||  |||||  |||| ||||| ||| |||| |||||||||||||||  ||| ||||| |||||| ||||||| ||||    
T  44792976 caagataaagtagtttttttggatttgggacgggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaat 44793075  T
Q  197 tgggaaaaacccaaacccataccca 221  Q
      || ||||||||||| ||||||||    
T  44793076 cagggaaaacccaaactcataccca 44793100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 221
Target Start/End: Complemental strand, 19572658 - 19572506
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | ||||||||| | ||||  |||||  | || |||||||||||||| |||||||||||||||| |    
T  19572658 caattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccgt 19572559  T
Q  169 taaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    || | ||| |||||| |||||||||||| |||||||||||| |||||||||||    
T  19572558 tacctgtcccatacccgtgttttgaaatcgggaaaaacccatacccataccca 19572506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 16433375 - 16433167
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catat 97  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||   ||  |||||||||| |||   ||||| ||||||||||||    |||||    
T  16433375 tttaatatttgttagaccaattgatttagttgctcctttaaatatcaat---ggtagtttttataataca---attatcaaacaaaataacatgacatat 16433282  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | ||||||||||||||  ||  |  |||| ||||||||||||||   ||||||||||| || ||| ||||| |||||| ||||||||||||     
T  16433281 caacataaagtaattttctgcatttggggtgggtttgggtatgggttcgggg---gtacctatatatccgttacccgtcccatacccgtgttttgaaatc 16433185  T
Q  198 gggaaaaacccaaaccca 215  Q
    ||  ||||| ||||||||    
T  16433184 ggagaaaactcaaaccca 16433167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 9983104 - 9982884
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacgc---atat 97  Q
    ||||| |||||||||||||||| ||||| |||||||||| |||||||||   ||  ||||| ||||||    |||||| ||||||||||||     ||||    
T  9983104 tttaacatttgttagaccgattaatttagttgctcctttgaatatcaat---ggtagttttgataacatgagaattatcaaacaaaataacatgatatat 9983008  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
     |||| | | ||||||||||||||| ||| |  |||| |||||||||||||| |||||||||||||| | ||| || || ||| || |||||||||||||    
T  9983007 taacataaagtaattttctgcattcgggatgggtttgggtatgggttcggggtgggtacctatatactcgttacccatcccattcccgtgttttgaaatt 9982908  T
Q  198 gggaaaaacccaaacccataccca 221  Q
    ||| ||||  ||||| ||||||||    
T  9982907 ggggaaaattcaaactcataccca 9982884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 219
Target Start/End: Complemental strand, 24236970 - 24236757
Alignment:
Q  7 atttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---catatcaaca 102  Q
    |||||||||||  | ||||||| ||| |||||||||||||||| || |   ||||||| ||||   ||||||| ||||||||||||    ||||||||||    
T  24236970 atttgttagacaaaatgatttagttgatcctttaaatatcaatgatag---tttttattaacatgacaattatcaaacaaaataacataacatatcaaca 24236874  T
Q  103 cataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaa 202  Q
     | ||||||||| | ||||  |||||  |||| |||||||||||||| |||||||||||||||| ||  ||||  |||||| ||||||||| || ||| |    
T  24236873 taaaataattttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttccccgttccatacccgtgttttgagatcgggga 24236774  T
Q  203 aaacccaaacccatacc 219  Q
    ||||||| |||||||||    
T  24236773 aaacccatacccatacc 24236757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 225
Target Start/End: Original strand, 29936296 - 29936515
Alignment:
Q  7 atttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---catatcaaca 102  Q
    |||||||||||  | ||||||| ||| ||||||||||||||||   ||  |||||||| ||||   ||||||| ||| ||||||||    ||||||||||    
T  29936296 atttgttagacaaaatgatttagttgatcctttaaatatcaat---ggtagtttttattaacatgacaattataaaaaaaaataacattacatatcaaca 29936392  T
Q  103 cataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaa 202  Q
     | | ||||||| | ||||  |||||  |||| |||||||||||||| |||||||||||||||| ||| ||||| |||||| || |||||| || ||| |    
T  29936393 taaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgagatcgggga 29936492  T
Q  203 aaacccaaacccatacccatacc 225  Q
    ||||||| |||||||| ||||||    
T  29936493 aaacccatacccatactcatacc 29936515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 221
Target Start/End: Complemental strand, 36187366 - 36187214
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | ||||| ||| | ||||  |||||  |||| |||||||||| ||| |||||||||||||||| |    
T  36187366 caattatcaaacaaaataacataacatatcaacataaaataactttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgt 36187267  T
Q  169 taaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    || ||||| |||||| ||||||||| || ||| |||||||| |||||||||||    
T  36187266 tacccgtcccatacccgtgttttgagatcggggaaaacccatacccataccca 36187214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 221
Target Start/End: Original strand, 16408953 - 16409037
Alignment:
Q  137 tatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||||||  ||||||||||||||  ||| ||||| |||||| |||||||||||||||| |||||||| |||||||||||    
T  16408953 tatgggttcggggtcggtacctatatacctgttacccgtcccatacccgtgttttgaaattggggaaaacccatacccataccca 16409037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 35937031 - 35936817
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catat 97  Q
    ||||| |||||||||||| ||||||||| ||||||||||||||||||||   ||  |||||| ||||||   |||||| ||||||||||||    |||||    
T  35937031 tttaacatttgttagaccaattgatttagttgctcctttaaatatcaat---ggtagtttttgtaacacggaaattatcaaacaaaataacatgacatat 35936935  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | ||||||||| |||||| ||||            |||| |||| |||||||||||||||| ||| ||||| |||||  ||| ||||||||     
T  35936934 caacataaagtaattttctacattcatgacg------------ggtttggggtgggtacctatatacccgttatccgtcccatactcgtgatttgaaatc 35936847  T
Q  198 gggaaaaacccaaacccatacccataccaa 227  Q
    ||| ||||||||||| |||||||| |||||    
T  35936846 ggggaaaacccaaactcatacccaaaccaa 35936817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 45866400 - 45866179
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---cata 96  Q
    ||||| ||||||||||| || ||||||| ||| ||||||||||||||||   ||  |||||||| ||||    |||||| ||||||||||||    ||||    
T  45866400 tttaacatttgttagacagaatgatttagttgatcctttaaatatcaat---ggtagtttttattaacatgataattatcaaacaaaataacatgacata 45866304  T
Q  97 tcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    |||||| | | ||||||| | ||||  ||| |  | || ||||| ||| |||| |||||||||||||| ||||| | |||||||||| ||||||||||||    
T  45866303 tcaacataaagtaattttttacatttgggatgggtatgggtatgagtttggggtgggtacctatatactcattacctgtctcatacccgtgttttgaaat 45866204  T
Q  197 tgggaaaaacccaaacccataccca 221  Q
     ||| |||||||| |||||||||||    
T  45866203 cggggaaaacccatacccataccca 45866179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 28297939 - 28298033
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatacccatacc 225  Q
    |||| |||||||||||||| |||||||||||||||| ||| ||||| |||||| |||||| || || ||| ||||| || |||||||||||||||    
T  28297939 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcatacccatacccatacc 28298033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 221
Target Start/End: Original strand, 51421801 - 51421953
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | | ||||||| | ||||  |||||  |||| |||||||||||||| |||||| |||||||   |    
T  51421801 caattatcaaacaaaataacataacatatcaacatagagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatacatgt 51421900  T
Q  169 taaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    || ||||| |||||| ||||||||| || |||||||||||| |||||||||||    
T  51421901 tacccgtcccatacccgtgttttgagatcgggaaaaacccatacccataccca 51421953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 23490850 - 23490765
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||||||| |||||||||||||||| ||| ||||| |||||| |||||| || || ||| |||||||| |||||||||||    
T  23490850 gtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccataccca 23490765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 50426740 - 50426655
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||||||| |||||||||||||||| ||| |||||||||||| ||||||||||||  || ||| |||| ||||| |||||    
T  50426740 gtatgggttcggggtgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcagggaaagcccatacccaaaccca 50426655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 18354295 - 18354078
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---cata 96  Q
    ||||| ||||| ||||| || ||||||| ||| || |||||||||||||   ||  |||||||| ||||   ||||||| ||||||||||||    ||||    
T  18354295 tttaacatttgatagacggaatgatttagttgatcttttaaatatcaat---ggtagtttttattaacatgacaattatcaaacaaaataacatgacata 18354199  T
Q  97 tcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    |||||| | ||||||||| | ||||  |||||| | || |||| ||||||||| ||| || ||||||||| ||| ||||| ||||||  |||||||||||    
T  18354198 tcaacataaaataattttttacatttgggacgagtatgggtatcggttcggggtgggaacttatatacccgttacccgtcccatacccatgttttgaaat 18354099  T
Q  197 tgggaaaaacccaaacccata 217  Q
     ||| |||||||| |||||||    
T  18354098 cggggaaaacccatacccata 18354078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 33293595 - 33293525
Alignment:
Q  151 gggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| ||||||| ||||||| ||||| |||||| |||||||||||| ||||||||||||||| ||||||||    
T  33293595 gggttcctatatccccattacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcataccca 33293525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 49250857 - 49250767
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| ||||||||||| || || ||||||||||||||||| ||||| |||||| ||||||||| || ||| ||||| || |||||||||||    
T  49250857 tttgggtatgggttcgaggtggatacctatatacccattacccgtcccatacccgtgttttgagatcggggaaaactcatacccataccca 49250767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 48576169 - 48576108
Alignment:
Q  164 cccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatacccatacc 225  Q
    ||||||| |||||||||||||||||||||| |||||| ||||| | ||||||||||||||||    
T  48576169 cccattacccgtctcatacctgtgttttgagattggggaaaactctaacccatacccatacc 48576108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 42439885 - 42439664
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---cata 96  Q
    ||||| |||||||||||  | ||||||| ||| |||||||||||||||| || |   ||||||| ||||   ||||||| ||||||||||||    ||||    
T  42439885 tttaacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatag---tttttattaacatgacaattatcaaacaaaataacataacata 42439789  T
Q  97 tcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    |||||| | | ||||||| | ||||  ||| || ||||  ||||||||||||| |||||||||||||||| |||  |||| ||||||  |||||||| ||    
T  42439788 tcaacataaagtaattttttacatttgggatgagtttggatatgggttcggggtgggtacctatatacccgttactcgtcccatacccatgttttgagat 42439689  T
Q  197 tgggaaaaacccaaacccataccca 221  Q
     || |||||  || |||||||||||    
T  42439688 cggaaaaaattcatacccataccca 42439664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 3628064 - 3627993
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacc 207  Q
    |||||||||||||| ||||||||| |||||| ||| ||||| |||||| |||||||||||| ||| ||||||    
T  3628064 gtatgggttcggggtgggtacctacatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacc 3627993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 5181049 - 5181132
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatacc 219  Q
    ||||||||| |||| |||| ||||||||||| ||| ||||| |||||| || ||||||||| ||| |||||||| |||||||||    
T  5181049 gtatgggtttggggtgggtgcctatatacccgttacccgtcccatacccgtattttgaaatcggggaaaacccatacccatacc 5181132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 34085215 - 34085326
Alignment:
Q  106 aataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaa 205  Q
    ||||||||| | |||| ||||||| | || |||||||||||||| |||||| ||||  ||| ||| || || |||||  |||||||||||| ||||||||    
T  34085215 aataattttttacatttaggacgagtatgggtatgggttcggggtgggtacatataaccccgttacccatcccatactcgtgttttgaaatcgggaaaaa 34085314  T
Q  206 cccaaacccata 217  Q
    ||||||| ||||    
T  34085315 cccaaactcata 34085326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 44632350 - 44632264
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataa 90  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||| ||    |||||||||||||  ||||| | |||||||||||    
T  44632350 tttaacatttgttagacctattgatttagttgctcctttaaatatcaatgat---agtttttataacacgacaattgtcaaacaaaataa 44632264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 34611078 - 34611168
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| | |||||||||||| | |||   ||| |||||| ||||||||| || |||||||||||| |||||||||||    
T  34611078 tttgggtatgggttcggggtgagtacctatatacacgttacatgtcccatacccgtgttttgagatcgggaaaaacccatacccataccca 34611168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 34060104 - 34060044
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    |||||||||||| | |||||||||||||||  ||| |||||||||||| ||||||||||||    
T  34060104 gtatgggttcggagtgggtacctatatacctgttatccgtctcatacccgtgttttgaaat 34060044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 40087678 - 40087458
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacgc---ata 96  Q
    ||||| ||||||||||| || ||||||| ||| ||||||||||||||||   ||  |||||||| ||||   ||||||| ||||||||||||     |||    
T  40087678 tttaacatttgttagacggaatgatttagttgatcctttaaatatcaat---ggtagtttttattaacatgacaattatcaaacaaaataacatgatata 40087582  T
Q  97 tcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    |||||| | | ||||||| | ||||  |||||  | || ||||| |||||||| |||||||||||| ||| |||  | || ||||||||||||||| |||    
T  40087581 tcaacataaagtaattttttacatttgggacgggtatgagtatgagttcggggtgggtacctatattcccgttactcatcccatacctgtgttttg-aat 40087483  T
Q  197 tgggaaaaacccaaacccataccca 221  Q
     ||| ||||| || |||||||||||    
T  40087482 cggggaaaactcatacccataccca 40087458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 13798287 - 13798333
Alignment:
Q  175 tctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  13798287 tctcatacccgtgttttgaaatcgggaaaaacccaaactcataccca 13798333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 10778646 - 10778561
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||||||| || || |||||  ||| ||| ||||| |||||| |||||||||||| |||||||||  |||| ||||||||    
T  10778646 gtatgggttcggggtggatatctataaccccgttacccgtcccatacccgtgttttgaaatcgggaaaaacttaaactcataccca 10778561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 221
Target Start/End: Original strand, 16903515 - 16903618
Alignment:
Q  118 cattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    ||||| |||||  |||| ||||| |||||||| |||||||||||| ||||||| |  || | |||  ||||||| ||||||||||||| | ||||||||     
T  16903515 cattcgggacgggtttgggtatgagttcggggtgggtacctatatccccattacctatcccgtactcgtgttttaaaattgggaaaaatctaaacccatg 16903614  T
Q  218 ccca 221  Q
    ||||    
T  16903615 ccca 16903618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 23058471 - 23058558
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatac 218  Q
    |||| |||||||||||||| |||||||||||| ||| ||| ||||||| |||  |  ||||||||| ||  ||||| |||||||||||    
T  23058471 tttgggtatgggttcggggtgggtacctatatccccgttacccgtctcgtactcgcattttgaaatcggagaaaactcaaacccatac 23058558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 24710872 - 24710930
Alignment:
Q  151 gggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaaccca 209  Q
    |||||||||||||||| ||| ||||| |||||| ||||||||| || ||| ||||||||    
T  24710872 gggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 24710930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 212
Target Start/End: Complemental strand, 48125788 - 48125686
Alignment:
Q  110 attttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaaccca 209  Q
    ||||||| |||||  ||||| |||| |||||||||||||| || ||||||||| | | ||| ||||| | |||| ||||||| ||||  ||||||| |||    
T  48125788 attttctacattcgcgacgagtttgggtatgggttcggggtggatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcaggaaaaatcca 48125689  T
Q  210 aac 212  Q
    |||    
T  48125688 aac 48125686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 34060234 - 34060146
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgttttta-taacacatcaattattaaacaaaataac 91  Q
    ||||| ||||||||||| || ||||||| ||| |||||||||||||   ||||| |||||||| |||||   ||||||| ||||||||||||    
T  34060234 tttaacatttgttagacggaatgatttagttgatcctttaaatatc---aatggttgtttttattaacatgacaattatcaaacaaaataac 34060146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 2514811 - 2514851
Alignment:
Q  180 tacctgtgttttgaaattgggaaaaacccaaacccataccc 220  Q
    |||| |||||||||||||||| ||||||||||| |||||||    
T  2514811 tacccgtgttttgaaattggggaaaacccaaactcataccc 2514851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13020562 - 13020610
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaat 49  Q
    ||||||||||||||||| || ||||||| ||| | ||||||||||||||    
T  13020562 tttaatatttgttagacggaatgatttagttgatactttaaatatcaat 13020610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 5e-46; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 1724525 - 1724307
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||||||   |  ||||||||||||||||||||||  |||||||||||    |||||    
T  1724525 tttaacatttgttagaccgatttatttagttgctcctttaaatatcaata---gtagtttttataacacatcaattatctaacaaaataacatgacatat 1724429  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | || |||||||||||| |||||  |||| |||||||||||||| ||||||||||||| || ||| ||||| ||||||  |||||||||||     
T  1724428 caacataaagtagttttctgcattcgggacgggtttgggtatgggttcggggtgggtacctatataaccgttacccgtcccatacccatgttttgaaatc 1724329  T
Q  198 gggaaaaacccaaacccatacc 219  Q
    ||| ||||||||||||||||||    
T  1724328 ggggaaaacccaaacccatacc 1724307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 6482251 - 6482030
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||||||||||||| || |||||||||||||||||  | |   ||||||||||||  ||||||| ||||||||||||   ||||||    
T  6482251 tttaacatttgttagaccgattgatttagtttctcctttaaatatcaatgttag---tttttataacacgacaattatcaaacaaaataacatggcatat 6482155  T
Q  98 caacacataataattttct-gcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    ||| | | | || |||| | |||||  |||||  |||| |||||||||||||| |||||| ||||||||| |||  |||| |||||| ||||||| ||||    
T  6482154 caatataaattagtttttttgcatttgggacgggtttgggtatgggttcggggtgggtacatatataccctttactcgtcccatacccgtgtttttaaat 6482055  T
Q  197 tgggaaaaacccaaacccataccca 221  Q
    |||| ||||||||||||||||||||    
T  6482054 tggggaaaacccaaacccataccca 6482030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 37107291 - 37107507
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catat 97  Q
    |||||||||||| ||||||||||||||| ||||| ||||||||| ||||   ||  ||||||||||||   ||||||| ||||||||||||    |||||    
T  37107291 tttaatatttgtcagaccgattgatttagttgcttctttaaataccaat---ggtagtttttataacatggcaattatcaaacaaaataacatgacatat 37107387  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | ||||||||||||||| |||   ||||  ||||   ||||||| |||||||||||||||| ||| ||||| |||||| |||||||||||||    
T  37107388 caacataaagtaattttctgcattcgggatatattttggtataaattcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatt 37107487  T
Q  198 gggaaaaacccaaacccatac 218  Q
    ||| ||||||||||| |||||    
T  37107488 ggg-aaaacccaaactcatac 37107507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 37349003 - 37349177
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||||    ||  ||||||||||| |   |||||| ||||||||||||   ||||||    
T  37349003 tttaagatttgttagaccgattaatttagttgctcctttaaatatcaac---ggtagtttttataacgcgagaattatcaaacaaaataacatggcatat 37349099  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgt 175  Q
    ||||| | ||||||||||||||||| |||||  |||| |||||||||| ||| || ||||||||||||||||| ||||    
T  37349100 caacataaaataattttctgcattcgggacgggtttgggtatgggttcagggtggatacctatatacccattacccgt 37349177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 19534335 - 19534517
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||||||||||||| ||||||||||| |||||   |||||  |||||||||||||  ||||||| ||||||||||||    |||||    
T  19534335 tttaacatttgttagaccgattgatttagttgctcctttagatatc---aatggtagtttttataacacgacaattatcaaacaaaataacatgacatat 19534431  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacc 183  Q
    ||||| | ||||||||||| |||||  ||||  |||| ||||| ||||| || |||||||||||||||  ||| ||||| ||||||    
T  19534432 caacataaaataattttctacattcgtgacgggtttgggtatgagttcgaggtgggtacctatatacctgttacccgtcccatacc 19534517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 26564711 - 26564931
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catat 97  Q
    ||||| ||||||| |||||||||||||| ||| ||| |||||||||||| || |   ||||||||||||  || |||| ||||||| ||||    |||||    
T  26564711 tttaacatttgtttgaccgattgatttagttgttccgttaaatatcaatgatag---tttttataacacggcagttatcaaacaaactaacatgacatat 26564807  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | || |||||||||||  |||||  |||| |||||| ||||||| |||||||||||||||| ||| ||||| |||||| | ||||||||||     
T  26564808 caacataaagtagttttctgcatttgggacgggtttgggtatggtttcggggtgggtacctatatacccgttacccgtcccatacccgcgttttgaaatc 26564907  T
Q  198 gggaaaaacccaaacccataccca 221  Q
    ||| ||| | ||||| ||||||||    
T  26564908 ggggaaagctcaaactcataccca 26564931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 12825676 - 12825465
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacgc---atat 97  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||||||||  | |   ||||||||||||   |||||| ||||||||||||     ||||    
T  12825676 tttaatatttattagaccaattgatttagttgctcctttaaatatcaattttag---tttttataacacgataattatcaaacaaaataacatgatatat 12825580  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | |||||||||||| || ||||   |||| |||| ||||| ||| |||||| |||||| || ||| ||||| |||||| ||||||||||||     
T  12825579 caacataaagtaattttctgcactcgggacaggtttgggtataggttcagggtgggtacgtatatatccgttacccgtcccatacccgtgttttgaaatc 12825480  T
Q  198 gggaaaaacccaaac 212  Q
    ||| |||||||||||    
T  12825479 ggggaaaacccaaac 12825465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 21423871 - 21423961
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||||||| |||| |||||||||||||||| ||| |||||||||||| |||||| || |||||| |||||||| |||||||||||    
T  21423871 tttgtgtatgggtttggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagattggggaaaacccatacccataccca 21423961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 221
Target Start/End: Complemental strand, 47550563 - 47550348
Alignment:
Q  7 atttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---catatcaaca 102  Q
    |||||||||||  | ||||||| ||| ||||||||||||||||   ||  |||||||| ||||   ||||||| ||||||||||||    ||||||||||    
T  47550563 atttgttagacaaaatgatttagttgatcctttaaatatcaat---ggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaaca 47550467  T
Q  103 cataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaa 202  Q
     | ||||||||| | ||||  |||||  |||| |||||||||||||| |||||||||||||||  ||| ||||| |||||| ||||||||| || ||| |    
T  47550466 taaaataattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcgggga 47550367  T
Q  203 aaacccaaacccataccca 221  Q
    |||| || ||| |||||||    
T  47550366 aaactcatacctataccca 47550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 6382357 - 6382267
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| |||||||||||||||| ||| ||||| |||||| ||||||||| || ||  |||||||| |||||||||||    
T  6382357 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaacccatacccataccca 6382267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 7608980 - 7609070
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| |||||||||||||||| ||| ||||| |||||| |||||| || || ||| |||||||| |||||||||||    
T  7608980 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccataccca 7609070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 11028083 - 11028173
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| ||||| |||||||| |||||||||||||||| ||| ||||| |||||| ||||||||| || ||| |||||||| |||||||||||    
T  11028083 tttgggtatgagttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccataccca 11028173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 44317545 - 44317635
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| |||||||||||||||| ||| ||||| |||||| |||||| || || ||| |||||||| |||||||||||    
T  44317545 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccataccca 44317635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 5902699 - 5902609
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| |||||||||||||||| ||| ||||| |||||| |||||| || || ||| |||||||| ||||| |||||    
T  5902699 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccaaaccca 5902609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 11122954 - 11122864
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| |||||||||||||||| ||| ||||| |||||| |||||| || || ||  |||||||| |||||||||||    
T  11122954 tttgagtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacccatacccataccca 11122864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 217
Target Start/End: Original strand, 31752404 - 31752552
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | | ||||||| | ||||  |||||  | || |||||||||||||| ||| |||||||||| | |    
T  31752404 caattatcaaacaaaataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggggtgggaacctatatactcgt 31752503  T
Q  169 taaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    ||  ||||||||||| |||||||||||| ||| |||||||| |||||||    
T  31752504 tactcgtctcatacccgtgttttgaaatcggggaaaacccatacccata 31752552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 32596306 - 32596184
Alignment:
Q  94 atatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttga 193  Q
    ||||||||| | ||||||||||| |||||  ||| | |||| ||||| ||| | || ||| |||||||||||| ||| ||||| |||||| |||||||||    
T  32596306 atatcaacataaaataattttctacattcgagacaagtttgggtatgagtttgaggtggggacctatatacccgttacccgtcccatacccgtgttttga 32596207  T
Q  194 aattgggaaaaacccaaacccat 216  Q
    ||| ||| ||||||| |||||||    
T  32596206 aatcggggaaaaccccaacccat 32596184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 7985337 - 7985189
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||| ||||||||| |||||| ||||||||||||   | |   ||||||||||||  ||||||| ||||||||||||    | |||    
T  7985337 tttaacatttgttagaccaattgatttagttgctcatttaaatatcaacggtag--ttttttataacacgacaattatcaaacaaaataacatgacttat 7985240  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggg 148  Q
    ||||| | |||| |||||||||||| |||||  |||| |||||||||||||    
T  7985239 caacataaaatacttttctgcattcgggacgggtttgggtatgggttcggg 7985189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 14606029 - 14605920
Alignment:
Q  112 tttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaa 211  Q
    ||||| ||||||||  || |||| |||||||||||||| |||||| ||||| ||  ||| ||||||| |||| || ||||||||| ||  ||||||||||    
T  14606029 tttctacattcaggtagagtttgggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaa 14605930  T
Q  212 cccataccca 221  Q
    ||||||||||    
T  14605929 cccataccca 14605920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 25941148 - 25941244
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatacccataccaa 227  Q
    |||| |||||||||||||| |||||||||| | ||| ||| | ||| | |||| |||||||||||| ||||||||||||||| ||| |||| |||||    
T  25941148 tttgggtatgggttcggggtgggtacctatcttcccgttacctgtcccgtacccgtgttttgaaatcgggaaaaacccaaacacatgcccaaaccaa 25941244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 55826702 - 55826630
Alignment:
Q  137 tatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaaccca 209  Q
    ||||||||||||| |||||||||||||||| ||| ||||| ||||||||||||| || || ||| ||||||||    
T  55826702 tatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgtttcgagatcggggaaaaccca 55826630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 9230164 - 9230376
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgc--tcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcat 95  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||   |||||  |||||||||||||  || |||| ||||||||||||    |||    
T  9230164 tttaacatttgttagaccgattgatttagttgctttcctttaaatatc---aatggtagtttttataacacgacagttatcaaacaaaataacatgacat 9230260  T
Q  96 atcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaa 195  Q
    || |    ||  ||||||||||||||| |||||  ||||  |||| ||| |||  || ||||||||||| | ||| |||||  ||||| ||||| | ||     
T  9230261 atta----atggtaattttctgcattcgggacgggtttggttatgagtttgggatggatacctatatactcgttatccgtcctatacccgtgttataaat 9230356  T
Q  196 ttgggaaaaacccaaaccca 215  Q
    ||||||||||||||||||||    
T  9230357 ttgggaaaaacccaaaccca 9230376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 13770670 - 13770522
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| ||||||| |||||||||||||| ||||||||| ||||||   ||||||  |||||||||||||   |||||| ||||||||||||   || |||    
T  13770670 tttaacatttgtttgaccgattgatttagttgctccttcaaatat---taatggtcgtttttataacacggtaattatcaaacaaaataacatggcttat 13770574  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcgggg 149  Q
     |||| | |||| |||| ||||||| |||||  |||| ||||| ||||||||    
T  13770573 taacataaaatagttttatgcattcgggacgggtttgagtatgagttcgggg 13770522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 39046832 - 39047049
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg--catat 97  Q
    ||||| ||||||||||| || ||||||| ||  |||||||||||||||    ||  |||||||| ||||   ||||||| ||||||||||||   |||||    
T  39046832 tttaacatttgttagacggaatgatttagttaatcctttaaatatcaac---ggtagtttttattaacatgacaattatcaaacaaaataacatacatat 39046928  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | ||||||| | ||||  |||||  | || ||||||||| || | |||||||||||||||| |||   ||| |||||| |||||| ||||||    
T  39046929 caacataaagtaattttttacatttgggacgggtatgggtatgggtttggagtgggtacctatatacccgttacatgtcccatacccgtgtttggaaatt 39047028  T
Q  198 gggaaaaacccaaacccatac 218  Q
    ||| |||||||| ||||||||    
T  39047029 ggggaaaacccatacccatac 39047049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 425703 - 425818
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||||||||||||| ||| || ||||||||||   |||||  ||||||||||||   ||||||| ||||||||||||   ||||||    
T  425703 tttaagatttgttagaccgattgatttagttgttcttttaaatatc---aatggtagtttttataacatgacaattatcaaacaaaataacatggcatat 425799  T
Q  98 caacacataataattttct 116  Q
    ||||| | | |||||||||    
T  425800 caacataaagtaattttct 425818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 1866634 - 1866544
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| || ||| ||||| | ||||| ||||||| |||| || ||||||||| |||||||||||| || ||||||||    
T  1866634 tttgggtatgggttcggggtggatacatatatccgcattacccgtctcgtacccgtattttgaaatcgggaaaaacccatactcataccca 1866544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 31918643 - 31918553
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| ||||| ||||||||||||||  |||| |||||| |||||| || || ||| |||||||| || ||||||||    
T  31918643 tttgggtatgggttcggggtgggtaactatatacccattactcgtcccatacccgtgtttcgagatcggggaaaacccatactcataccca 31918553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 10302099 - 10302184
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||||||| |||||| ||||  ||| ||| |||||||||||| ||  |||||||| ||| |||||| |||||||||||||    
T  10302099 gtatgggttcggggtgggtacatataaccccgttacccgtctcatacccgtactttgaaatcggggaaaacctaaacccataccca 10302184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 21544589 - 21544673
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaaccca 215  Q
    |||| |||||||||||||| |||||| ||||| ||||||| | ||| | |||| || ||||||||| |||||||| |||||||||    
T  21544589 tttgggtatgggttcggggtgggtacatatatccccattacctgtcccgtacccgtattttgaaatcgggaaaaatccaaaccca 21544673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 42299800 - 42299886
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatacc 219  Q
    |||| |||||||||| ||| |||||||||||||||| ||| ||||| |||||| |||||||||||| ||| |||| ||| |||||||||    
T  42299800 tttgagtatgggttcagggtgggtacctatatacccgttacccgtc-catacc-gtgttttgaaatcggggaaaatccatacccatacc 42299886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 3737791 - 3737870
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaaccca 215  Q
    |||||||||||||  |||||| ||||  | | ||| ||||| |||||| |||||||||||||||||||||||| ||||||    
T  3737791 gtatgggttcgggatgggtacatataacctcgttacccgtcccatacccgtgttttgaaattgggaaaaaccctaaccca 3737870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 214
Target Start/End: Original strand, 29527822 - 29527905
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaaccc 214  Q
    |||| |||||||||||||| |||||| ||||| ||| ||| ||||| | |||| || ||||||||| ||| |||||||||||||    
T  29527822 tttgggtatgggttcggggtgggtacatatatccccgttacccgtcacgtacccgtattttgaaatcggggaaaacccaaaccc 29527905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 47103748 - 47103835
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatac 218  Q
    |||| |||||||||||||| |||||| ||||| | | ||| ||| | | |||| || ||||||||||||| |||||||||||||||||    
T  47103748 tttgggtatgggttcggggtgggtacatatatccgcgttacccgccccgtacccgtattttgaaattggggaaaacccaaacccatac 47103835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 47239580 - 47239384
Alignment:
Q  22 tgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---catatcaacacataataattttctg 117  Q
    ||||||| ||| |||||||||||||||| || |   ||||||| ||||   ||||||| ||||||||||||    |||||||||| | ||||||||| |     
T  47239580 tgatttagttgatcctttaaatatcaatgatag---tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaaataatttttta 47239484  T
Q  118 cattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    ||||  ||||   | || |||||||||| ||| ||| |||||||||||| ||| ||||| |||||| ||||||| |||| || ||||| ||| |||||||    
T  47239483 catttgggacaggtatgggtatgggttcagggtgggaacctatatacccgttacccgtcccatacccgtgttttaaaatcggaaaaaatccatacccata 47239384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 15987347 - 15987257
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| ||||| |||||||||| ||| || || |||||| ||||||| ||||  || ||||| || |||||||||||    
T  15987347 tttgggtatgggttcggggtgggtatctatatacccgttacccatcccatacccgtgttttaaaatctgggaaaactcatacccataccca 15987257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 32585375 - 32585564
Alignment:
Q  9 ttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---catatcaacaca 104  Q
    ||||||||| || ||||||| ||| |||||||||||||||| ||    |||||||| ||||   ||||||| ||||||||||||    ||||| |||| |    
T  32585375 ttgttagacggaatgatttagttgatcctttaaatatcaatgatta--gtttttattaacatgacaattatcaaacaaaataacaagacatataaacata 32585472  T
Q  105 taataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
     | ||| ||| | ||||  |||||  |||| |||||||||| ||| |||||||||||||||| ||| | ||| |||||| ||||||||||||    
T  32585473 aagtaagtttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaat 32585564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 48459496 - 48459578
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatac 218  Q
    |||||||||||||| |||||||||||||||  ||| ||||  ||||||  ||||||||||| ||| |||||||| | ||||||    
T  48459496 gtatgggttcggggtgggtacctatatacctgttacccgttccatacccatgttttgaaatcggggaaaacccatatccatac 48459578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 218
Target Start/End: Complemental strand, 19883154 - 19883054
Alignment:
Q  118 cattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    ||||| |||||| ||||||||| ||||||||| || ||||||||| ||| ||| || || | || | ||||||| |||| ||| ||||||||||| ||||    
T  19883154 cattcgggacgagtttgtgtatcggttcggggtggatacctatatccccgttacccttcccgtatccgtgttttaaaatcggggaaaacccaaactcata 19883055  T
Q  218 c 218  Q
    |    
T  19883054 c 19883054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 25298918 - 25298834
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaaccca 215  Q
    |||| |||||||||||||| ||  | |||||| ||||||| || || | |||| ||||||||||||  |||||||||||||||||    
T  25298918 tttgggtatgggttcggggtggacagctatatccccattacccatcccgtacccgtgttttgaaatccggaaaaacccaaaccca 25298834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 36306816 - 36306860
Alignment:
Q  152 ggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    ||||||||||| ||| |||||||||||||||| ||||||||||||    
T  36306816 ggtacctatatccccgttaaccgtctcatacccgtgttttgaaat 36306860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 42907875 - 42907935
Alignment:
Q  110 attttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccatta 170  Q
    ||||||| ||||| |||||| |||| ||||||| |||||| |||||||||||| |||||||    
T  42907875 attttctacattcgggacgagtttgggtatgggctcggggtgggtacctatatccccatta 42907935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 221
Target Start/End: Complemental strand, 1724299 - 1724264
Alignment:
Q  186 tgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||||||||| ||||||||||||||||||||||||    
T  1724299 tgttttgaaatcgggaaaaacccaaacccataccca 1724264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 221
Target Start/End: Complemental strand, 12075737 - 12075626
Alignment:
Q  110 attttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaaccca 209  Q
    ||||||| ||||| |||||| |||| ||| | ||| |||| |||||| ||| | || |||| | ||| | |||| ||||||||||||||| |||||| ||    
T  12075737 attttctacattccggacgagtttgagtacgagtttggggtgggtacatatctccctattacctgtcacgtacccgtgttttgaaattggaaaaaactca 12075638  T
Q  210 aacccataccca 221  Q
    ||| ||||||||    
T  12075637 aactcataccca 12075626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 43309534 - 43309580
Alignment:
Q  172 ccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatac 218  Q
    ||||| |||||| |||||||||||| ||||||||||||||| |||||    
T  43309534 ccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatac 43309580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28695357 - 28695313
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatat 45  Q
    ||||| |||||||| ||||| ||||||| ||||||||||||||||    
T  28695357 tttaacatttgttaaaccgaatgatttagttgctcctttaaatat 28695313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29755545 - 29755497
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaat 49  Q
    ||||| |||||||||| ||||||||||| || || ||||||||||||||    
T  29755545 tttaacatttgttagatcgattgatttagttacttctttaaatatcaat 29755497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 33275 - 33487
Alignment:
Q  9 ttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatatcaacacat 105  Q
    |||||||||||||||||||| ||| ||||||||||||||||  | |   ||||||||||||| ||||||  ||||||||||||   |||| |||||| |     
T  33275 ttgttagaccgattgatttagttgttcctttaaatatcaatcgtag---tttttataacacaacaattaccaaacaaaataacatggcatgtcaacataa 33371  T
Q  106 aataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaa 205  Q
    | || |||||||||||| |||||| |||| |||||||||||||| |||||| ||||||||| ||| ||||| |||||| |||||||||||| ||| ||||    
T  33372 agtagttttctgcattcgggacgagtttgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaa 33471  T
Q  206 cccaaacccataccca 221  Q
    ||||||||||||||||    
T  33472 cccaaacccataccca 33487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 5e-43; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 5376964 - 5377181
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacgc---atat 97  Q
    ||||| |||||||| ||||||||||||| |||||||||||||||||| |   ||  |||||||||||||  ||||||| ||||||||| ||     ||||    
T  5376964 tttaacatttgttaaaccgattgatttagttgctcctttaaatatcatt---ggtagtttttataacacgacaattatcaaacaaaattacatgatatat 5377060  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | ||||||||||||||| ||||  ||||| |||||||||||||| |||||||||||||||| ||| ||||| |||||||||||||||||||     
T  5377061 caacataaagtaattttctgcattcgggacagatttgggtatgggttcggggtgggtacctatataccctttacccgtcccatacctgtgttttgaaatc 5377160  T
Q  198 gggaaaaacccaaacccatac 218  Q
    ||| ||||||||||| |||||    
T  5377161 ggggaaaacccaaactcatac 5377181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 12980255 - 12980476
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||| || |   ||||||||||||   |||||| ||||||||||||   ||||||    
T  12980255 tttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatag---tttttataacacgaaaattatcaaacaaaataacatggcatat 12980351  T
Q  98 caacacataataattttct-gcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    ||||| | |||| |||| | |||||  |||||  |||| |||||||||||||| |||||| ||||||||||||| ||||| |||||| ||||||||||||    
T  12980352 caacataaaatattttttttgcatttgggacgggtttgggtatgggttcggggtgggtacttatatacccattacccgtcccatacccgtgttttgaaat 12980451  T
Q  197 tgggaaaaacccaaacccataccca 221  Q
     ||| |||||| |||||||||||||    
T  12980452 cggggaaaaccaaaacccataccca 12980476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 7 - 215
Target Start/End: Original strand, 26622836 - 26623044
Alignment:
Q  7 atttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatatcaacac 103  Q
    ||||||| |||| ||||||||| ||||||||||||||||||||   ||  |||||||||||||| ||||||| ||||||||||||   |||||||||||     
T  26622836 atttgtttgaccaattgatttaattgctcctttaaatatcaat---ggtagtttttataacacaacaattatcaaacaaaataacatggcatatcaacat 26622932  T
Q  104 ataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaa 203  Q
    | ||||||||| |||||||   |||| |||| |||||||||||||| |||||| ||||||||||||| || || |||||| ||||||||||||  || ||    
T  26622933 aaaataattttttgcattcgaaacgagtttgggtatgggttcggggtgggtacttatatacccattacccatcccatacccgtgttttgaaatcagggaa 26623032  T
Q  204 aacccaaaccca 215  Q
    ||||||||||||    
T  26623033 aacccaaaccca 26623044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 3920417 - 3920631
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||||||| ||||| ||| ||||||||||||||||   ||  ||||||||||||   ||||||| ||||||||||||   ||||||    
T  3920417 tttaacatttgttagaccgattcatttagttgttcctttaaatatcaat---ggtagtttttataacatggcaattatcaaacaaaataacatggcatat 3920513  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | ||||||||||| ||||| ||||   |||| |||||||||||||| |||||||||||||||  ||| ||||| |||||| ||||||||||||     
T  3920514 caacataaaataattttctacattcgggacagttttgggtatgggttcggggtgggtacctatatacctgttatccgtcccataccagtgttttgaaatc 3920613  T
Q  198 gggaaaaacccaaaccca 215  Q
    ||| ||||||||||||||    
T  3920614 ggggaaaacccaaaccca 3920631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 18826086 - 18825867
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||||||||||||| ||| || |||| ||||||||   ||  |||||||||||||  ||||||| ||||||||||||   ||||||    
T  18826086 tttaacatttgttagaccgattgatttagttgttcttttatatatcaat---ggtagtttttataacacgacaattatcaaacaaaataacatggcatat 18825990  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||  | |||||||||||| |||  ||| |  |||| ||| |||||||||| |||||||||||||||| ||| ||||| |||||| ||||||||||||     
T  18825989 caacgtaaaataattttctgtatttgggatgggtttgggtacgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatc 18825890  T
Q  198 gggaaaaacccaaacccataccc 220  Q
    ||| |||||||||||||| ||||    
T  18825889 ggggaaaacccaaacccacaccc 18825867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 27850540 - 27850320
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catat 97  Q
    ||||| |||||||||| ||||||||||| |||||||||||||||||||| |  |   ||||||||||||  ||||||| ||||||||||||    |||||    
T  27850540 tttaacatttgttagatcgattgatttagttgctcctttaaatatcaatgaaag---tttttataacacgacaattatcaaacaaaataacatgacatat 27850444  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    || |  | | ||||||||| ||||| |||||  |||| |||||||||||||  ||||||||||| |||| ||| ||||| |||||| ||||||||||||     
T  27850443 catcgtaaagtaattttctacattcgggacgggtttgggtatgggttcgggatgggtacctatacacccgttacccgtcccatacccgtgttttgaaatc 27850344  T
Q  198 gggaaaaacccaaacccataccca 221  Q
    ||| |||||||| ||||| |||||    
T  27850343 ggggaaaacccatacccaaaccca 27850320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 16078892 - 16079112
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||| ||||||||||||||||| || ||||||||||||||||    ||  |||||||||||||  ||||||| ||||||||||||   ||||||    
T  16078892 tttaacattttttagaccgattgatttagtttctcctttaaatatcaag---ggtagtttttataacacgacaattatcaaacaaaataacatggcatat 16078988  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||  | | |||||||||| ||||| ||||| |||| |||| |||| |||| ||| |||||||||||| ||| ||||| |||||| ||||||||| ||     
T  16078989 caacgtaaagtaattttctgtattcatgacgagtttgggtataggtttggggtgggcacctatatacccgttacccgtcccatacccgtgttttgagatc 16079088  T
Q  198 gggaaaaacccaaacccataccca 221  Q
    ||  |||||||||||  |||||||    
T  16079089 ggagaaaacccaaacttataccca 16079112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 25783121 - 25782910
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacgc---atat 97  Q
    |||||||||| ||| ||||||||||||| ||||||||||||||||  || || |   ||||||||||||  ||||||| |||||||||||      ||||    
T  25783121 tttaatatttattataccgattgatttagttgctcctttaaatattgatgatag---tttttataacactgcaattatcaaacaaaataatatgagatat 25783025  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
     |||| | | ||||||||||||||| ||||| ||||  ||||| |||||||| |||||||||||||||||||| |||||||||||| |||||||  |||     
T  25783024 taacataaagtaattttctgcattcgggacggattttggtatgagttcggggtgggtacctatatacccattatccgtctcatacccgtgttttataatc 25782925  T
Q  198 gggaaaaacccaaac 212  Q
    ||  |||||||||||    
T  25782924 ggagaaaacccaaac 25782910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 41103531 - 41103755
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacgc---ata 96  Q
    ||||| ||||||||||| || ||||||| ||| ||||||||||||||  |||||   ||| ||| ||||   ||||||| ||||||||||||     |||    
T  41103531 tttaacatttgttagacggaatgatttagttgatcctttaaatatcatcaatggtaatttgtattaacatgacaattatcaaacaaaataacaagagata 41103630  T
Q  97 tcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    |||||| | ||||||||| | |||| ||||||  ||| ||||||||||||||| |||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  41103631 tcaacataaaataattttttacatttaggacgggtttatgtatgggttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaat 41103730  T
Q  197 tgggaaaaacccaaacccataccca 221  Q
     ||| |||||||| ||||| |||||    
T  41103731 cggggaaaacccatacccacaccca 41103755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 2630788 - 2630568
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| ||||| |||||||||||||||| |||||| ||||||||||   |||||  |||||||||| ||  ||||||| ||||||||||||   ||||||    
T  2630788 tttaacatttgatagaccgattgatttagttgctcatttaaatatc---aatggtagtttttataatacggcaattatcaaacaaaataacatggcatat 2630692  T
Q  98 caacacataata-attttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    ||||| | | ||  |||| ||||||| |||||  |||| |||||||||||||| ||||| |||||||||| | | ||||| ||||||  |||||| ||||    
T  2630691 caacataaagtagtttttttgcattcgggacgggtttgggtatgggttcggggtgggtatctatatacccgtcacccgtcccatacccatgtttt-aaat 2630593  T
Q  197 tgggaaaaacccaaacccataccca 221  Q
     ||| ||||||||||||||||||||    
T  2630592 cggggaaaacccaaacccataccca 2630568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 7 - 219
Target Start/End: Original strand, 30650515 - 30650728
Alignment:
Q  7 atttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---catatcaaca 102  Q
    |||||||||||  | ||||||| ||| ||||||||||||||||   ||  |||||||| ||||   ||||||| ||||||||||||    ||||||||||    
T  30650515 atttgttagacaaaatgatttagttgatcctttaaatatcaat---ggtagtttttattaacatggcaattatcaaacaaaataacataacatatcaaca 30650611  T
Q  103 cataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaa 202  Q
     | | ||||||| | ||||  ||||| ||||| |||||||||||||| |||||||||||||||| ||| ||||| |||||| ||||||||| |||||| |    
T  30650612 taaagtaattttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagattgggga 30650711  T
Q  203 aaacccaaacccatacc 219  Q
    |||| || |||||||||    
T  30650712 aaactcatacccatacc 30650728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 221
Target Start/End: Original strand, 7779892 - 7780107
Alignment:
Q  7 atttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---catatcaaca 102  Q
    |||||||||||  | ||||||| ||| ||||||||||||||||   ||  |||||||| ||||   ||||||| ||||||||||||    ||||||||||    
T  7779892 atttgttagacaaaatgatttagttgatcctttaaatatcaat---ggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaaca 7779988  T
Q  103 cataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaa 202  Q
     | ||||| ||| | ||||  |||||  |||| |||| ||||||||| |||||||||||||||||||| ||||| |||||| ||||||||| || ||| |    
T  7779989 taaaataaatttttacatttgggacgggtttgggtataggttcggggtgggtacctatatacccattatccgtcccatacccgtgttttgagatcgggga 7780088  T
Q  203 aaacccaaacccataccca 221  Q
    ||||||| |||||||||||    
T  7780089 aaacccatacccataccca 7780107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 26004675 - 26004474
Alignment:
Q  12 ttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatatcaacacataat 108  Q
    ||||||||||||||||| | |||||||||||||||||| || |   ||||||||| |   ||||||| ||||||||||||   ||||||||||| | | |    
T  26004675 ttagaccgattgatttagtcgctcctttaaatatcaatgatag---tttttataagaagacaattatcaaacaaaataacatggcatatcaacataaagt 26004579  T
Q  109 aattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaaccc 208  Q
    |||||||||||||| || ||| || ||  |||||||||||| ||||| |||||||||  ||| ||||| ||||||   |||||||||| | | |||||||    
T  26004578 aattttctgcattcggggcgagttggt--atgggttcggggtgggtatctatatacctgttacccgtcccatacccaagttttgaaatcgaggaaaaccc 26004481  T
Q  209 aaaccca 215  Q
    |||||||    
T  26004480 aaaccca 26004474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 24425260 - 24425454
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||||   |||||  |||||||||||||   |||||| ||||| ||||||   ||||||    
T  24425260 tttaacatttgttagaccggttgatttatttg-tcctttaaatatc---aatggtagtttttataacacgataattatcaaacagaataacatggcatat 24425355  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    ||||| ||| ||||||| ||||||  | |||  ||||   ||||| || ||| |||||||||||||||| ||| ||||| |||||| ||||||||||||    
T  24425356 caacatatagtaattttatgcatttggaacgggtttggaaatggggtcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaat 24425454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 44734572 - 44734366
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---cata 96  Q
    |||||||||||||||||  | ||||||| ||| ||||| |||||||||| || |   ||||||| ||||   ||||||| ||| ||||||||    ||||    
T  44734572 tttaatatttgttagacgtaatgatttaattgatccttcaaatatcaatgatag---tttttattaacatgacaattatcaaataaaataacatgacata 44734476  T
Q  97 tcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    |||||| | | ||||||| | ||||  ||||| || ||||||||||||||||| |||||||||||||||||||| | ||| |||||| ||||||||||||    
T  44734475 tcaacataaagtaattttttacatttgggacggatatgtgtatgggttcggggtgggtacctatatacccattaccggtcccatacccgtgttttgaaat 44734376  T
Q  197 tgggaaaaac 206  Q
     | |||||||    
T  44734375 cgagaaaaac 44734366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 5916280 - 5916122
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacgcatatcaa 100  Q
    ||||| |||||||||||||||||||| |||| ||||||||||||||   |||||  ||||| |||||||| ||||||| ||||||||||| ||||||  |    
T  5916280 tttaacatttgttagaccgattgattgatttactcctttaaatatc---aatggtagttttgataacacagcaattatcaaacaaaataa-gcatattga 5916185  T
Q  101 cacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatata 163  Q
    || | ||||||||| || |||  |||| |||||| |||| ||||||||| | |||| ||||||    
T  5916184 cataaaataattttatgaatttgggacaaatttgggtattggttcggggtgagtacatatata 5916122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 10072480 - 10072565
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||||||| |||||||||||||||| ||| ||||  |||||| |||||||||||| ||| |||||||| |||||||||||    
T  10072480 gtatgggttcggggtgggtacctatatacccgttacccgttccatacccgtgttttgaaatcggggaaaacccatacccataccca 10072565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 45380121 - 45380202
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    |||||||||||||| |||||||||||||||| ||| ||||| |||||| || ||||||||| |||||||||||| |||||||    
T  45380121 gtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgaaatcgggaaaaacccatacccata 45380202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 221
Target Start/End: Original strand, 25905575 - 25905727
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaa-tttgtgtatgggttcggggagggtacctatataccca 167  Q
    ||||||| ||||||||||||    |||||||||| | ||||||||| | ||||  ||||||  |||| ||||| |||||||| || ||||||| |||||     
T  25905575 caattatcaaacaaaataacataacatatcaacataaaataattttttacatttgggacgatgtttgggtatgagttcggggtgg-tacctatgtacccg 25905673  T
Q  168 ttaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||| ||||| |||||||||||||||| |||||| |||||||| |||||||||||    
T  25905674 ttacccgtcccatacctgtgttttgagattggggaaaacccatacccataccca 25905727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 217
Target Start/End: Original strand, 16866116 - 16866264
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | | ||||||| | ||||  |||||  |||| |||||||||||||| |||||||||||||||| |    
T  16866116 caattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgt 16866215  T
Q  169 taaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    ||  |||| |||||| ||||||||| || ||| |||||||| |||||||    
T  16866216 tactcgtcccatacccgtgttttgagatcggggaaaacccatacccata 16866264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 37579141 - 37579360
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| ||||||||||  |||||||||| |||||| ||||||||||||| ||     |||||||||||   ||||||| ||||||||||||   |||||     
T  37579141 tttaacatttgttagatggattgatttagttgctcatttaaatatcaatgataa---tttttataacatgacaattatcaaacaaaataacatggcatag 37579237  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgt-ctcatacctgtgttttgaaat 196  Q
    ||||| | | ||||||||||||||   |||   |||| |||| ||||||||| |||||||||||||||| ||| || | | |||  | |||||| |||||    
T  37579238 caacataaagtaattttctgcatttgagacagctttgggtataggttcggggtgggtacctatatacccgttacccttacccat--ccgtgtttcgaaat 37579335  T
Q  197 tgggaaaaacccaaacccataccca 221  Q
     |||||||| |||||||||||||||    
T  37579336 cgggaaaaatccaaacccataccca 37579360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 38140008 - 38139790
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---cata 96  Q
    ||||| ||||||||||| || ||||||| ||| |||||||||||||||| || |   ||||||| ||||   ||||||| ||||||||||||    ||||    
T  38140008 tttaacatttgttagacggaatgatttagttgatcctttaaatatcaatgatag---tttttattaacatgacaattatcaaacaaaataacatgacata 38139912  T
Q  97 tcaacacataataattttctg-cattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaa 195  Q
    |||| | | ||||||||| |  ||||   ||||  ||||  ||||||||||||| |||||| ||||||| ||||| ||||| |||||  |||||||||||    
T  38139911 tcaatataaaataatttttttacatttgagacgggtttggttatgggttcggggtgggtacttatatactcattacccgtcccatactcgtgttttgaaa 38139812  T
Q  196 ttgggaaaaacccaaacccata 217  Q
    ||||| |||||||| |||||||    
T  38139811 ttggggaaaacccatacccata 38139790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 221
Target Start/End: Original strand, 38152835 - 38152986
Alignment:
Q  73 aattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccatt 169  Q
    |||||| ||||||||||||    |||||||||| | ||||||||| | ||||  |||||  |||  |||||||||||||| ||||||||||||| || ||    
T  38152835 aattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggacgggtttaggtatgggttcggggtgggtacctatatagccgtt 38152934  T
Q  170 aaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    | ||||  ||||||  ||||||||||| ||| |||||||| |||||||||||    
T  38152935 atccgttccatacccatgttttgaaatcggggaaaacccatacccataccca 38152986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 46127394 - 46127179
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||||||||||||| ||| |||||||||||||   |||||  ||| |||||||||  |||| || ||||||||||||    |||||    
T  46127394 tttaacatttgttagaccgattgatttagttgttcctttaaatatc---aatggtagttattataacacgacaatgatcaaacaaaataacatgacatat 46127298  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
       || | ||||||||||||||||  |||||  |||| ||||| | |||| | ||||||||||| |||  ||| ||||| |||||| ||| ||| ||||     
T  46127297 ---cataaaataattttctgcatttgggacgggtttgagtatgagatcggtgtgggtacctatacacctgttatccgtcccatacccgtgattttaaatc 46127201  T
Q  198 gggaaaaacccaaacccataccc 220  Q
    ||| ||| |||||||||||||||    
T  46127200 ggg-aaaccccaaacccataccc 46127179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 72 - 218
Target Start/End: Complemental strand, 3227092 - 3226943
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | ||||||||| | ||||  ||| |  | || |||||||||||||| |||||||||||| ||  |    
T  3227092 caattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggatgtgtatgagtatgggttcggggtgggtacctatattcctgt 3226993  T
Q  169 taaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatac 218  Q
    || ||||| |||||| |||||||||||| ||| |||||||| ||||||||    
T  3226992 tacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatac 3226943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 35074479 - 35074569
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||  |||||||||||||||| ||| ||||| |||||| ||||||| | || ||| |||||||| |||||||||||    
T  35074479 tttgggtatgggttcgggttgggtacctatatacccgttacccgtcccatacccgtgttttaagatcggggaaaacccatacccataccca 35074569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 221
Target Start/End: Complemental strand, 45885911 - 45885759
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | | ||||||| | ||||  ||||| ||||  |||||||||||||| ||||||||||||||   |    
T  45885911 caattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacggattttggtatgggttcggggtgggtacctatatacttgt 45885812  T
Q  169 taaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    || ||||| |||||| ||||||||| || ||| ||||| || |||||||||||    
T  45885811 tacccgtcccatacccgtgttttgagatcggggaaaactcatacccataccca 45885759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 21702673 - 21702758
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||||||| |||||||||||||||| ||| ||||| |||||| |||||| || || ||| |||||||| || ||||||||    
T  21702673 gtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatactcataccca 21702758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 25980132 - 25979923
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---cata 96  Q
    ||||| ||||||||||| || ||||||||||  ||||||||||||||||   |   |||||||| ||||    |||||| ||||||||||||    |||     
T  25980132 tttaacatttgttagacggaatgatttatttaatcctttaaatatcaat---gtaagtttttattaacatgataattatcaaacaaaataacatgacatt 25980036  T
Q  97 tcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    |||||| | ||||||||| | ||||  | | | ||||| ||||| ||| |||| |||||| |||||| || ||| |||||||||||||||||||||||||    
T  25980035 tcaacataaaataattttttacatttggaaaggatttgggtatgagtttggggtgggtacatatatatccgttacccgtctcatacctgtgttttgaaat 25979936  T
Q  197 tgggaaaaaccca 209  Q
     ||| ||||||||    
T  25979935 cggggaaaaccca 25979923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 39456089 - 39456009
Alignment:
Q  141 ggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||||||| |||||||||||||||| ||| ||||| ||||||  ||||||||||| ||| |||||||| | |||||||||    
T  39456089 ggttcggggtgggtacctatatacccgttacccgtcccatacccatgttttgaaatcggggaaaacccatatccataccca 39456009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 221
Target Start/End: Complemental strand, 41741527 - 41741444
Alignment:
Q  137 tatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||||||||||  ||||||||| |||||| ||| |||||||||||| |||||||||||| ||| |||||||| || ||||||||    
T  41741527 tatgggttcgggt-gggtacctacatacccgttatccgtctcatacccgtgttttgaaatcggggaaaacccatactcataccca 41741444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 209
Target Start/End: Original strand, 43507416 - 43507532
Alignment:
Q  93 catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttg 192  Q
    |||||||||| | ||||||||| | ||||  |||||| | |  |||||||||| ||| |||| ||||||||||| ||| ||||||||||||  |||||||    
T  43507416 catatcaacataaaataattttttacatttgggacgagtataggtatgggttcagggtgggtgcctatatacccgttacccgtctcatacccatgttttg 43507515  T
Q  193 aaattgggaaaaaccca 209  Q
    |||| ||| ||||||||    
T  43507516 aaatcggggaaaaccca 43507532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 44845219 - 44845131
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatacc 219  Q
    ||||||||||||||||||| |||||  ||||| | ||||||||||| | |||| || || |||||| ||| ||||||||||||||||||    
T  44845219 tttgtgtatgggttcggggtgggtaaatatatcctcattaaccgtcccgtacccgtattatgaaatcggggaaaacccaaacccatacc 44845131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 18125312 - 18125225
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatac 218  Q
    |||| ||||| |||||||| |||||||||||||||| ||| ||||| |||||| |||||| || || |||||||||||| || |||||    
T  18125312 tttgggtatgcgttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgggaaaaacccatactcatac 18125225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 16811702 - 16811819
Alignment:
Q  94 atatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttga 193  Q
    ||||||||| | | ||||||| | ||||  |||||  |||| |||||||||||||  ||||| |||||||||||||| |||||||||||| |||||||||    
T  16811702 atatcaacataaagtaattttttacatttgggacggctttgggtatgggttcgggt-gggtatctatatacccattatccgtctcatacccgtgttttga 16811800  T
Q  194 aattgggaaaaacccaaac 212  Q
     || ||| |||| ||||||    
T  16811801 gatcggggaaaatccaaac 16811819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 215
Target Start/End: Complemental strand, 23475360 - 23475263
Alignment:
Q  118 cattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaaccca 215  Q
    ||||| |||||  |||| |||||||||||  | |||||| ||||| ||||||| || || || ||| |||||||||||| ||||||||||||||||||    
T  23475360 cattcgggacgggtttgggtatgggttcgaagtgggtacatatatccccattacccatcccaaacccgtgttttgaaatcgggaaaaacccaaaccca 23475263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 3157092 - 3157188
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatacccataccaa 227  Q
    |||| |||| ||||||| | |||||||||||| ||| ||| ||||| ||||||  | ||||||||| ||| |||||| ||||||||||||| |||||    
T  3157092 tttgggtataggttcggtgtgggtacctatatccccgttatccgtcccatacccatattttgaaatcggggaaaacctaaacccatacccaaaccaa 3157188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26004735 - 26004687
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaat 49  Q
    ||||| |||||||||||||||||||||| | ||||||||||||||||||    
T  26004735 tttaacatttgttagaccgattgatttagtcgctcctttaaatatcaat 26004687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 32546201 - 32546288
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatac 218  Q
    |||| |||||||||||||| |||||| ||||| ||| ||| ||||  | |||| || ||||||||| |||||||| ||||||||||||    
T  32546201 tttgggtatgggttcggggtgggtacatatatccccgttacccgttccgtacccgtattttgaaatcgggaaaaatccaaacccatac 32546288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 217
Target Start/End: Original strand, 17885412 - 17885560
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | | ||||||| | ||||  |||||  | || ||||||||||||||  || |||||||||||| |    
T  17885412 caattatcaaacaaaataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggggttggaacctatatacccgt 17885511  T
Q  169 taaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    || ||||| ||||||  |||||| |||| ||| |||||||| |||||||    
T  17885512 tacccgtcccatacccatgttttaaaatcggggaaaacccatacccata 17885560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 22973397 - 22973487
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| ||||||||||| || ||||||  |||| ||||||| ||||| | |||| || ||||||||| | | ||||||||||||||||||||    
T  22973397 tttgggtatgggttcgaggtgggtacagatatccccattacccgtcccgtacccgtattttgaaatcgtggaaaacccaaacccataccca 22973487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 192
Target Start/End: Complemental strand, 44794173 - 44794051
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | ||||||||| | ||||  ||||   |||| |||||||||||||| |||||||| ||||| | |    
T  44794173 caattatcaaacaaaataacataacatatcaacataaaataattttttacatttgggacaggtttgggtatgggttcggggtgggtacct-tatactcgt 44794075  T
Q  169 taaccgtctcatacctgtgttttg 192  Q
    || |||||||||||| ||||||||    
T  44794074 tacccgtctcatacccgtgttttg 44794051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 221
Target Start/End: Complemental strand, 8906667 - 8906583
Alignment:
Q  137 tatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||||||||||| |||||| ||||  ||| |||  ||||||||||  |||||||||||| ||  ||||| ||||||||||||||    
T  8906667 tatgggttcggggtgggtacatataaccccgttattcgtctcatactcgtgttttgaaatcggagaaaactcaaacccataccca 8906583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 31426017 - 31426105
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatacc 219  Q
    |||| ||||| |||||||| || ||| ||||| ||| ||| |||||||||||| || |||| |||| ||| |||||||||||| |||||    
T  31426017 tttgggtatgcgttcggggtggatacatatatccccgttacccgtctcatacccgtatttttaaatcggggaaaacccaaaccaatacc 31426105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 11472776 - 11472710
Alignment:
Q  153 gtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatacc 219  Q
    |||||||||| ||| ||| || ||| |||||| ||||||||||| ||||||||| ||||| ||||||    
T  11472776 gtacctatattcccgttatccatcttatacctctgttttgaaatcgggaaaaactcaaactcatacc 11472710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 24753193 - 24753258
Alignment:
Q  151 gggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    |||||||||||||||| ||| ||||| |||||| ||||||||| || ||| |||||||| |||||||    
T  24753193 gggtacctatatacccgttacccgtcccatacccgtgttttgagatcggg-aaaacccatacccata 24753258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 42908105 - 42908035
Alignment:
Q  151 gggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||| ||||| ||||||| ||||| | |||| || ||||||||| ||| ||||||||||| ||||||||    
T  42908105 gggtacatatatccccattacccgtcccgtacccgtattttgaaatcggggaaaacccaaactcataccca 42908035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 215
Target Start/End: Complemental strand, 23533700 - 23533604
Alignment:
Q  118 cattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaaccca 215  Q
    ||||| |||||| |||| |||||||||||  | |||||| ||||| ||||||| || || |||||| || |||| |||| ||| ||||||||||||||    
T  23533700 cattcgggacgagtttgggtatgggttcgaagtgggtacatatat-cccattacccatcgcatacccgtattttcaaatcggggaaaacccaaaccca 23533604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 45708944 - 45708887
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttga 193  Q
    ||||| |||||||| |||||||||||||||| ||| |||||  ||||| |||||||||    
T  45708944 gtatgagttcggggtgggtacctatatacccgttacccgtccaatacccgtgttttga 45708887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44986113 - 44986065
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaat 49  Q
    ||||| ||||||||||| || ||||||| ||| ||||||||||||||||    
T  44986113 tttaacatttgttagacggaatgatttagttgatcctttaaatatcaat 44986065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 5e-43; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 6028104 - 6027889
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||| || | |  |||||||||||  ||||||| ||||||||||||   || |||    
T  6028104 tttaacatttgttagaccaattgatttagttgctcctttaaatatcaatgatagtt--ttttataacacgacaattatcaaacaaaataacatggcttat 6028007  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | |||| ||||||||||||||||||  | || |||||||||||||| |||||||||||||||  ||| ||||||||||||  |||||| ||||     
T  6028006 caacataaaatacttttctgcattcaggacgggtatgagtatgggttcggggtgggtacctatatacctgttacccgtctcatacccatgttttaaaatc 6027907  T
Q  198 gggaaaaacccaaaccca 215  Q
    ||| ||||||||||||||    
T  6027906 ggggaaaacccaaaccca 6027889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 13705576 - 13705351
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---cata 96  Q
    ||||| |||||||| || || ||||||| ||| ||||||||||||||||   ||  |||||||| ||||   ||||||| ||||||||||||    ||||    
T  13705576 tttaacatttgttatacggaatgatttagttgatcctttaaatatcaat---ggtagtttttattaacatgacaattatcaaacaaaataacatgacata 13705480  T
Q  97 tcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    |||||| | | |||||||   ||||  |||||  |||  |||||||||||||| |||||||||||||||| ||| | |||||||||| ||||||||||||    
T  13705479 tcaacataaagtaatttttcacatttgggacgggtttaggtatgggttcggggtgggtacctatatacccgttacctgtctcatacccgtgttttgaaat 13705380  T
Q  197 tgggaaaaacccaaacccatacccatacc 225  Q
     ||| ||||| || |||||||||||||||    
T  13705379 cggggaaaactcatacccatacccatacc 13705351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 14540660 - 14540861
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catat 97  Q
    ||||| ||||||||||| |||||||||| |||||||||||||||||       |  |||||||||||||  ||||||| ||||||||||||    |||||    
T  14540660 tttaacatttgttagactgattgatttagttgctcctttaaatatc-------gtagtttttataacacgacaattatcaaacaaaataacatgacatat 14540752  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | ||||||||| | ||| ||||| ||||| |||||| ||| | | |||| ||||||||||| ||| | |||||||||| ||||||||||||     
T  14540753 caacataaagtaattttctacgttcgggacggatttgagtatggattccgagtgggtgcctatatacccgttacctgtctcatacccgtgttttgaaatc 14540852  T
Q  198 gggaaaaac 206  Q
    ||| |||||    
T  14540853 ggggaaaac 14540861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 31942400 - 31942183
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||||| ||||||| |||||||||||||||||   |||||  |||||||||||||  ||||||| ||||||||||||   ||||||    
T  31942400 tttaacatttgttagaccgactgatttagttgctcctttaaatatc---aatggtagtttttataacacgacaattatcaaacaaaataacatggcatat 31942304  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtg-ttttgaaat 196  Q
    || || | | || |||||||||||   |||   ||||  |||||||| |||| |||||| ||||||||  ||| |||||||||||| ||| |||||||||    
T  31942303 cagcataaagtagttttctgcatttgtgacaggtttggttatgggtttggggtgggtacttatatacctgttacccgtctcatacccgtgtttttgaaat 31942204  T
Q  197 tgggaaaaacccaaacccata 217  Q
     | | | ||||||||||||||    
T  31942203 cgaggataacccaaacccata 31942183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 45256697 - 45256903
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---cata 96  Q
    ||||| ||||||||||| || ||||||| ||| ||||||||||||||||   ||   ||||||| ||||   ||||||| ||||||||||||    ||||    
T  45256697 tttaacatttgttagacggaatgatttagttgatcctttaaatatcaat---ggtaatttttattaacatgacaattatcaaacaaaataacaagacata 45256793  T
Q  97 tcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    |||| | | | ||||||| | ||||  |||||  |||  |||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||    
T  45256794 tcaaaataaagtaattttttacatttgggacgggtttaggtatgggttcggggtgggtacttatatacccattaaccgtctcatacccgtgttttgaaat 45256893  T
Q  197 tgggaaaaac 206  Q
     ||| |||||    
T  45256894 cggggaaaac 45256903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 19105055 - 19104831
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| ||||||||||||||| |||||| |||||| |||||||||| |||   |  |||||||||||||  ||||||||||||||||||||    ||  |    
T  19105055 tttaacatttgttagaccgatcgatttagttgctcttttaaatatcgata---gtagtttttataacacggcaattattaaacaaaataacatgacacgt 19104959  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcata----cctgtgttttga 193  Q
    ||||| | | ||||||||||||||| |||||  |||| |||||| |||| || || ||||||||||||| |||  | || ||||    || |||||| ||    
T  19104958 caacataaagtaattttctgcattcgggacgggtttgagtatggattcgaggtggatacctatatacccgttacacatcccatacaggcccgtgtttgga 19104859  T
Q  194 aattgggaaaaacccaaacccataccca 221  Q
    ||| ||| ||||||||||| ||||||||    
T  19104858 aatcggggaaaacccaaactcataccca 19104831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 221
Target Start/End: Original strand, 37999426 - 37999578
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | | ||||||| | ||||  |||||  |||| ||||| |||||||| |||||| ||||||||| |    
T  37999426 caattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgagttcggggtgggtacttatatacccgt 37999525  T
Q  169 taaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    || |||||||||||| ||||||||| || ||| |||||||| |||||||||||    
T  37999526 tacccgtctcatacccgtgttttgagatcggggaaaacccatacccataccca 37999578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 37106702 - 37106787
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||||| | |||||||||||||||| ||| ||||| |||||| |||||||||||| ||| |||||||| |||||||||||    
T  37106702 gtatgggttcggagtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccataccca 37106787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 10208514 - 10208424
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| ||||||||||||||  |||||||||||| |||||| ||||| |||||| ||||||| | |||||| |||||||| |||||||||||    
T  10208514 tttgagtatgggttcggggtaggtacctatatatccattacccgtcccatacccgtgttttaagattggggaaaacccatacccataccca 10208424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 30846951 - 30847041
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| |||||||||||||||| ||| ||||| |||||| |||||| || || ||| |||||||| |||||||||||    
T  30846951 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccataccca 30847041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 111 - 221
Target Start/End: Complemental strand, 35248489 - 35248379
Alignment:
Q  111 ttttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaa 210  Q
    |||||| |||||||||||  |||| |||||||||||||| |||||||| ||| ||| ||| ||||| |||||| |||||||| ||| | | |||||||||    
T  35248489 ttttctacattcaggacgggtttgggtatgggttcggggtgggtacctttatcccctttacccgtcccatacccgtgttttgtaatcgtggaaaacccaa 35248390  T
Q  211 acccataccca 221  Q
    |||| ||||||    
T  35248389 acccgtaccca 35248379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 9632391 - 9632478
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatac 218  Q
    |||| |||||||||||||| || ||||||||||||||||| ||||| |||||| |||||| || || ||| |||||||| ||||||||    
T  9632391 tttgggtatgggttcggggtggatacctatatacccattacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatac 9632478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 193
Target Start/End: Complemental strand, 8916083 - 8915959
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | ||||||||| | ||||  |||||  |||| |||||||||||||| |||||||||||||||  |    
T  8916083 caattatcaaacaaaataacataacatatcaacataaaataattttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacctgt 8915984  T
Q  169 taaccgtctcatacctgtgttttga 193  Q
    || ||||| |||||| |||||||||    
T  8915983 tacccgtcccatacccgtgttttga 8915959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 24414216 - 24414126
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| |||||||||||||||  ||| ||||| |||||| ||||||||| || ||| |||||| | |||||||||||    
T  24414216 tttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaaccgatacccataccca 24414126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 42798072 - 42798011
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttg 192  Q
    ||||||||||||||||||| |||||| ||||||||| ||| |||||||||||| ||||||||    
T  42798072 tttgtgtatgggttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttg 42798011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 221
Target Start/End: Complemental strand, 44746318 - 44746103
Alignment:
Q  7 atttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacat--caattattaaacaaaataac---gcatatcaac 101  Q
    ||||||||||| || | |||||||||||||||||||||||||| || |   |||||||||| |||  |||| || ||| ||||||||   |||||||||     
T  44746318 atttgttagacggaataatttatttgctcctttaaatatcaatgatag---tttttataac-cattacaatgatcaaataaaataacatggcatatcaag 44746223  T
Q  102 acataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattggga 201  Q
    | | | | ||||||| ||||  |||||  |||| ||||| ||| |  | |||||| ||||||||||||| ||||| ||||   |||||||||||| |||     
T  44746222 ataaagtgattttctacatttgggacgggtttgagtatgagtttgaagtgggtacatatatacccattacccgtcccatattcgtgttttgaaatcgggg 44746123  T
Q  202 aaaacccaaacccataccca 221  Q
    |||||||||| |||||||||    
T  44746122 aaaacccaaatccataccca 44746103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 22900804 - 22900895
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatacccataccaa 227  Q
    ||||| |||||||| |||||  ||||  ||| |||  |||| |||||| |||||||||||| |||||||||||||||||||||||| |||||    
T  22900804 gtatgagttcggggtgggtatatataaccccgttactcgtcccatacccgtgttttgaaatcgggaaaaacccaaacccatacccagaccaa 22900895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 13830741 - 13830830
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| |||||| ||||||||| || |||||| |||||| ||||||||| || | | |||||||| |||||||||||    
T  13830741 tttgagtatgggttcggggtgggtacttatatacccgtt-accgtcccatacccgtgttttgagatcgaggaaaacccatacccataccca 13830830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 217
Target Start/End: Complemental strand, 7314770 - 7314646
Alignment:
Q  93 catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttg 192  Q
    |||||||||| | ||||||||| | ||||  |||||  | || |||||||||||||| ||| |||||||||||| ||| ||||| |||||  || ||||     
T  7314770 catatcaacataaaataattttttacatttgggacgggtgtgggtatgggttcggggtgggaacctatatacccgttacccgtcccatactcgtatttta 7314671  T
Q  193 aaattgggaaaaacccaaacccata 217  Q
    |||| ||| |||||||| |||||||    
T  7314670 aaatcggggaaaacccatacccata 7314646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 221
Target Start/End: Complemental strand, 12193905 - 12193821
Alignment:
Q  137 tatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||| |||| || ||||| |||||||||||||| ||||| |||||| ||||| |||||| ||||||||| || || ||||||||    
T  12193905 tatggattcgaggtgggtatctatatacccattacccgtcccatacccgtgttctgaaatcgggaaaaacacatactcataccca 12193821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 221
Target Start/End: Complemental strand, 35510540 - 35510437
Alignment:
Q  118 cattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    ||||| ||||| ||||| |||||  |||| || || ||||||||| | ||||| ||||||  || |||||||||||||||||| ||||||||||| | ||    
T  35510540 cattcgggacggatttgagtatgaattcgaggtggatacctatatcctcattacccgtcttgtatctgtgttttgaaattggggaaaacccaaactctta 35510441  T
Q  218 ccca 221  Q
    ||||    
T  35510440 ccca 35510437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 45115569 - 45115628
Alignment:
Q  137 tatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    ||||||||||||  |||||||||||||||  ||| |||||||||||| ||||||||||||    
T  45115569 tatgggttcgggatgggtacctatatacctgttacccgtctcatacccgtgttttgaaat 45115628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37319816 - 37319862
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatca 47  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||||    
T  37319816 tttaacatttgttagaccgattgatttagttgctactttaaatatca 37319862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 37472838 - 37472753
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||||  | ||||||||| |||||| ||| ||||| |||||| |||||||||||| ||| |||| ||| || ||||||||    
T  37472838 gtatgggttcgaagtgggtacctaaatacccgttacccgtcccatacccgtgttttgaaatcggggaaaatccatactcataccca 37472753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 10920525 - 10920682
Alignment:
Q  7 atttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---catatcaaca 102  Q
    |||||||||||  | ||||||| ||| |||||||||||||||| || |   ||||||| ||||   ||||||| ||||||||||||    ||||||||||    
T  10920525 atttgttagacaaaatgatttagttgatcctttaaatatcaatgatag---tttttattaacatgacaattatcaaacaaaataacataacatatcaaca 10920621  T
Q  103 cataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatata 163  Q
     | | ||||||| | ||||  ||||| ||||| |||||||||||||| || ||||||||||    
T  10920622 taaagtaattttttacatttgggacggatttgggtatgggttcggggtggatacctatata 10920682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 14331532 - 14331616
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaaccca 215  Q
    |||| |||||||||||| | |||||| ||||| ||| ||| ||||| ||||||||| |||| |||| ||| |||||||| |||||    
T  14331532 tttgggtatgggttcggagtgggtacatatatccccgttacccgtcccatacctgtatttttaaataggggaaaacccataccca 14331616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 3547177 - 3547260
Alignment:
Q  137 tatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccc 220  Q
    ||||||||||||| |||||| |||||  || ||| ||||| | |||| || ||||||||| || ||||||||||| ||||||||    
T  3547177 tatgggttcggggtgggtacatatatctccgttacccgtcccgtacccgtattttgaaatcggtaaaaacccaaatccataccc 3547260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 12341652 - 12341695
Alignment:
Q  178 catacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||    
T  12341652 catacctgtgttttgaaatcggggaaaacccatacccataccca 12341695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 36128190 - 36128100
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| | |||||||||||||| ||| || || |||||| |||||| || || ||| ||| | || |||||||||||    
T  36128190 tttgggtatgggttcggggtgagtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaaccacatacccataccca 36128100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 15546790 - 15546839
Alignment:
Q  172 ccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||| |||||| |||||||||||| ||| ||||||||||||||| ||||    
T  15546790 ccgtcccatacccgtgttttgaaatcggggaaaacccaaacccatgccca 15546839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 35965319 - 35965423
Alignment:
Q  110 attttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaaccca 209  Q
    ||||||| ||||| |||||  |||| |||||||||||| | |||||| | ||| |||||||  | || |||||| |||||||||||| ||| ||||| ||    
T  35965319 attttctacattcgggacgggtttgggtatgggttcggagtgggtacatgtatccccattacacatc-catacccgtgttttgaaatcggggaaaactca 35965417  T
Q  210 aaccca 215  Q
    ||||||    
T  35965418 aaccca 35965423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 16226941 - 16226854
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac 91  Q
    ||||| |||| ||||||| ||||||||| |||||  ||||||||||   |||||  |||||||||||||  ||||||| ||| ||||||||    
T  16226941 tttaacatttcttagaccaattgatttagttgctaatttaaatatc---aatggtagtttttataacacgacaattatcaaataaaataac 16226854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37472944 - 37472896
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaat 49  Q
    ||||| ||||||||||| || ||||||| ||| ||||||||||||||||    
T  37472944 tttaacatttgttagacagaatgatttagttgatcctttaaatatcaat 37472896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 24568813 - 24569030
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac--gcatatc 98  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||||||   |  |||||||||||||||||||||| ||||||||||||   ||||||    
T  24568813 tttaacatttgttagaccgatttatttagttgctcctttaaatatcaata---gtagtttttataacacatcaattatcaaacaaaataactgacatatc 24568909  T
Q  99 aacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattg 198  Q
    |||| | | || |||||| ||||| ||||| ||||| |||||||||||||| || |||||||||||||  || | ||| ||||||  |||| |||||| |    
T  24568910 aacataaagtagttttctccattcgggacggatttgagtatgggttcggggtggatacctatatacccgctacctgtcccatacccatgttgtgaaatcg 24569009  T
Q  199 ggaaaaacccaaacccatacc 219  Q
    ||||||| ||| |||||||||    
T  24569010 ggaaaaatccatacccatacc 24569030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 1012491 - 1012712
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||   ||   ||||||||||||| ||||||| ||||||||||||   ||||||    
T  1012491 tttaacatttgttagaccgattgatttagttgctcctttaaatatcaat---ggtactttttataacacagcaattatcaaacaaaataacatggcatat 1012587  T
Q  98 caacacataata--attttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaa 195  Q
    ||||| | | ||   |||| ||||||| |||||| |||| |||||||||||||| |||||||||||||||||||| ||||| |||||   |||||| |||    
T  1012588 caacataaagtagttttttttgcattcgggacgagtttgggtatgggttcggggtgggtacctatatacccattacccgtcccatactcatgtttt-aaa 1012686  T
Q  196 ttgggaaaaacccaaacccataccca 221  Q
    | ||| ||||||||||| ||||||||    
T  1012687 tcggggaaaacccaaactcataccca 1012712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 20399465 - 20399686
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggct-gtttttataacacatcaattat-taaacaaaataac---gcat 95  Q
    ||||| |||||||||||||||||||||  ||| ||||||||||||||||    ||| |||||||||||||  ||||||| |||| ||||||||   | ||    
T  20399465 tttaacatttgttagaccgattgatttggttggtcctttaaatatcaat----gctagtttttataacacgacaattatataaaaaaaataacatggtat 20399560  T
Q  96 atcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaa 195  Q
    ||||||| | ||||||||| ||||||| |||||  |||| | |||||||||||| ||||| |||||||||| ||| ||||| |||||| |||||||||||    
T  20399561 atcaacataaaataattttttgcattcgggacgggtttgggaatgggttcggggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaa 20399660  T
Q  196 ttgggaaaaacccaaacccataccca 221  Q
    | ||  ||||||||||||||||||||    
T  20399661 tcggagaaaacccaaacccataccca 20399686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 17469129 - 17469343
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||| ||||||| ||||||||| || |||||||||||||||||  | |||   |||||||||   ||||||| ||||||||||||   ||||||    
T  17469129 tttaaaattttttagacccattgatttagtttctcctttaaatatcaatggtagct---tttataacaaggcaattatcaaacaaaataacatggcatat 17469225  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | || ||||||||| |  |||||  |||| ||||||||| |||| |||||||||||||||| ||| ||||| |||||| ||||||||||||     
T  17469226 caacataaagtagttttctgcagttgggacgggtttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatc 17469325  T
Q  198 gggaaaaacccaaaccca 215  Q
    ||| ||||||||||||||    
T  17469326 ggggaaaacccaaaccca 17469343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 43113840 - 43113631
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catat 97  Q
    ||||| |||||||| ||||||||||||| ||||||||| |||||||||| || |   ||||||||||||  |||||||  |||||||||||    |||||    
T  43113840 tttaacatttgttataccgattgatttagttgctccttcaaatatcaatgatag---tttttataacacgacaattatctaacaaaataacataacatat 43113744  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    |||||   | || ||||||||||||  |||| ||||| ||||| |||||||| |||||||||||||||  ||| ||||| ||| || ||||||||||||     
T  43113743 caacatgaagtagttttctgcattcgagacggatttgggtatgagttcggggtgggtacctatatacctgttacccgtcccatgcccgtgttttgaaatc 43113644  T
Q  198 gggaaaaacccaa 210  Q
    |||||||||||||    
T  43113643 gggaaaaacccaa 43113631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 27932286 - 27932507
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---cata 96  Q
    ||||| |||||||||||  | ||||||| ||| |||||||||||||||| || |   ||||||| ||||   ||||||| ||||||||||||    ||||    
T  27932286 tttaacatttgttagacgtaatgatttaattgatcctttaaatatcaatgatag---tttttattaacatgacaattatcaaacaaaataacatgacata 27932382  T
Q  97 tcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    |||||| | ||||||||| | ||||  ||||| || || |||||||||||||| |||||||||||||||| |||  |||| |||||| ||||||||||||    
T  27932383 tcaacataaaataattttttacatttgggacggatatgagtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaaat 27932482  T
Q  197 tgggaaaaacccaaacccataccca 221  Q
     ||| |||||||| |||||||||||    
T  27932483 cggggaaaacccatacccataccca 27932507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 1063380 - 1063601
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---cata 96  Q
    ||||| ||||||||||| || ||||||| ||| || |||||||||||||   ||   ||||||| ||||   ||||||| ||||||||||||    ||||    
T  1063380 tttaacatttgttagacggaatgatttagttgatcgtttaaatatcaat---ggtaatttttatcaacatgacaattatcaaacaaaataacaagacata 1063476  T
Q  97 tcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    |||||| | | ||||||| | || |  ||| | ||||| ||||| |||||||| |||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  1063477 tcaacataaagtaattttttacacttgggatggatttgggtatgagttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaat 1063576  T
Q  197 tgggaaaaacccaaacccataccca 221  Q
     |||||||||||| |||||||||||    
T  1063577 cgggaaaaacccatacccataccca 1063601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 36132130 - 36131917
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catat 97  Q
    ||||| ||||||| |||||||| ||||| ||||| |||||||| |   ||||||   ||||||||||||  ||||||| ||||||||||||    |||||    
T  36132130 tttaacatttgtttgaccgattaatttaattgcttctttaaattt---taatggtaatttttataacacggcaattatcaaacaaaataacatgacatat 36132034  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
     |||| | ||||| ||||||||||| ||||| ||||||||||| |||||||| || ||||| ||| ||| ||| || || |||||  ||||||||||||     
T  36132033 -aacataaaataactttctgcattcgggacggatttgtgtatgagttcggggtggatacctgtatgccctttacccatcccatactcgtgttttgaaata 36131935  T
Q  198 gggaaaaacccaaaccca 215  Q
    ||| ||||| ||||||||    
T  36131934 ggggaaaactcaaaccca 36131917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 45235938 - 45236156
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---cata 96  Q
    ||||| ||||||||||| || ||||||| ||| ||||||||||||||||   ||  |||||||| ||||    |||||| ||||||||||||    ||||    
T  45235938 tttaacatttgttagacggaatgatttagttgatcctttaaatatcaat---ggtagtttttattaacatgataattatcaaacaaaataacataacata 45236034  T
Q  97 tcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    |||||| | | ||||||| | ||||  |||||  | ||  ||||||||||||| |||||||||||||||||||| ||||| |||||| ||||||||||||    
T  45236035 tcaacataaattaattttttacatttgggacgggtatggatatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaat 45236134  T
Q  197 tgggaaaaacccaaacccatac 218  Q
      || ||||| || ||||||||    
T  45236135 cagggaaaactcatacccatac 45236156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 34139321 - 34139485
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||||   |||||  |||||||||||||  ||||||| ||||||||||||   |  |||    
T  34139321 tttaacatttgttagaccgattgatttgtttactcctttaaatatc---aatggtagtttttataacacgacaattatcaaacaaaataacatggtctat 34139417  T
Q  98 caacacataataa-ttttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacc 165  Q
    ||||| | | ||| |||| ||||||| |||||  |||| |||| ||||||||| |||||||||||||||    
T  34139418 caacataaagtaatttttttgcattcgggacgggtttgggtat-ggttcggggtgggtacctatatacc 34139485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 34776943 - 34777160
Alignment:
Q  5 atatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---catatcaa 100  Q
    |||||||||||||  | ||||||| ||| ||||||||||||||||   ||  |||||||| ||||   ||||||| ||||||||||||    ||||||||    
T  34776943 atatttgttagacaaaatgatttagttgatcctttaaatatcaat---ggtagtttttattaacattgcaattatcaaacaaaataacataacatatcaa 34777039  T
Q  101 cacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattggg 200  Q
    || | ||||||||| | ||||  ||| | ||||| |||||||||||||| ||||||||| |||||  |||  |||  |||||| ||||||||| || |||    
T  34777040 cataaaataattttttacatttgggatggatttgggtatgggttcggggtgggtacctaaatacctgttactcgttccatacccgtgttttgagatcggg 34777139  T
Q  201 aaaaacccaaacccataccca 221  Q
    ||||||||| ||||| |||||    
T  34777140 aaaaacccatacccaaaccca 34777160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 221
Target Start/End: Complemental strand, 40248493 - 40248365
Alignment:
Q  93 catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttg 192  Q
    |||||||||| | | ||||||| | ||||  ||||| || || |||||||||||||  |||||||||||||||| ||| |||||||||||| ||||||||    
T  40248493 catatcaacataaagtaattttttacatttgggacggatatgggtatgggttcgggatgggtacctatatacccgttatccgtctcatacccgtgttttg 40248394  T
Q  193 aaattgggaaaaacccaaacccataccca 221  Q
    |||| ||| |||||  | |||||||||||    
T  40248393 aaatcggggaaaacatatacccataccca 40248365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 24927953 - 24928043
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| |||||||||||||||| ||| |||||||||||| |||||| || ||  || |||||||| |||||||||||    
T  24927953 tttgggtatgggttcggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagatcagggaaaacccatacccataccca 24928043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 30481528 - 30481418
Alignment:
Q  108 taattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacc 207  Q
    ||||||| | ||||| |||||| |||| |||||||||||||| |||||||||||| | |||||  ||||||||||  || |||||||||  |||||||||    
T  30481528 taattttttacattcgggacgagtttgggtatgggttcggggtgggtacctatatcctcattactcgtctcatactcgtattttgaaatcaggaaaaacc 30481429  T
Q  208 caaacccatac 218  Q
    ||||| |||||    
T  30481428 caaactcatac 30481418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 32303065 - 32303155
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| |||||||||||||||| ||| ||||| |||||| |||||| || || ||| |||||||| |||||||||||    
T  32303065 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccataccca 32303155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 215
Target Start/End: Original strand, 14186265 - 14186408
Alignment:
Q  75 ttattaaacaaaataac---gcatatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaa 171  Q
    |||| ||||||||||||   |||||| |||| | | ||||||||| |||||||||||  |||| |||||||||| ||| | ||||||||||| || |||     
T  14186265 ttatcaaacaaaataacatggcatattaacataaattaattttctacattcaggacgggtttgggtatgggttcagggtgagtacctatatatccgttac 14186364  T
Q  172 ccgtctcatacctgtgttttgaaattgggaaaaacccaaaccca 215  Q
    || || |||||| |||||||||||| | ||||||| ||||||||    
T  14186365 ccatcccatacccgtgttttgaaatcgagaaaaactcaaaccca 14186408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 29108901 - 29108816
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||||||| |||||| ||||||||| ||| ||||| ||||||  |||||| |||| |||||||||||| |||||||||||    
T  29108901 gtatgggttcggggtgggtacatatatacccgttacccgtcccatacccatgttttaaaatcgggaaaaacccatacccataccca 29108816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 39445655 - 39445570
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||| |||||||| ||||||||||| |||| ||| | ||| |||||| |||||||||||| |||||||||||| |||||||||||    
T  39445655 gtatgagttcggggtgggtacctataaacccgttacctgtcccatacccgtgttttgaaatcgggaaaaacccatacccataccca 39445570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 5700337 - 5700444
Alignment:
Q  108 taattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacc 207  Q
    ||||||| | ||||| ||| | ||||| ||||||||||| || ||||| |||||| ||| ||| | ||||||||||||||||||||||| |||||||||     
T  5700337 taattttatacattcgggatggatttgggtatgggttcgaggtgggtatctatatccccgttaccagtctcatacctgtgttttgaaatcgggaaaaact 5700436  T
Q  208 caaaccca 215  Q
     |||||||    
T  5700437 taaaccca 5700444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 221
Target Start/End: Original strand, 14687390 - 14687493
Alignment:
Q  118 cattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    |||||||||||| |||| |||||||||||||| || ||| ||||| ||  ||   |||| ||||||||||||||||||| ||| |||||||||| |||||    
T  14687390 cattcaggacgagtttgggtatgggttcggggtggatacatatatccctgtttctcgtcccatacctgtgttttgaaatcggggaaaacccaaatccata 14687489  T
Q  218 ccca 221  Q
    ||||    
T  14687490 ccca 14687493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 24870238 - 24870018
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catat 97  Q
    ||||| ||||||||||| || ||||||| ||| ||||||||||||||||   ||  |||||  |||||   ||||||| ||||||| ||||    |||||    
T  24870238 tttaacatttgttagacggaatgatttagttgatcctttaaatatcaat---ggtagttttattaacatgacaattatcaaacaaattaacatgacatat 24870142  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | ||||||| | ||||  |||||  |||  ||||||| |||||| |||||||||||||||| ||| ||||| |||||| ||||||| ||||     
T  24870141 caacataaagtaattttttacatttgggacgggtttaggtatgggctcggggtgggtacctatatacccgttacccgtcacatacccgtgttttaaaatc 24870042  T
Q  198 gggaaaaacccaaacccataccca 221  Q
    ||| ||||| || | |||||||||    
T  24870041 ggggaaaactcatagccataccca 24870018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 27056646 - 27056553
Alignment:
Q  124 ggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    |||||| | ||||||||||||||||| |||||  ||||  ||| ||| ||||| |||||||||  |||||||| ||||||||||||||||||||    
T  27056646 ggacgagtatgtgtatgggttcggggtgggtagatataaccccgttacccgtcccatacctgtactttgaaatcgggaaaaacccaaacccata 27056553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 35215378 - 35215465
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac 91  Q
    ||||| |||||||||||||||||||||| ||||||| |||||||||   || ||  |||||||||||||  ||||||| ||||||||||||    
T  35215378 tttaacatttgttagaccgattgatttagttgctccattaaatatc---aagggtagtttttataacacgacaattatcaaacaaaataac 35215465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 4230794 - 4230724
Alignment:
Q  151 gggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||||||||| |||  |||| |||||||||||||||| || ||| |||||||| |||||||||||    
T  4230794 gggtacctatatacccgttactcgtcccatacctgtgttttgagatcggggaaaacccatacccataccca 4230724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 34021352 - 34021511
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg--catatc 98  Q
    ||||| ||||||||||   ||||||||  ||||||||||||||||||||| | |   ||||||||  |   ||||||| ||||||||||||   ||||||    
T  34021352 tttaacatttgttagattaattgatttcgttgctcctttaaatatcaatagtag---tttttatataatgacaattatcaaacaaaataacatacatatc 34021448  T
Q  99 aacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatat 162  Q
    |||| | ||| |||||||||||||||||||| | ||||||| |||| |||| | ||||||||||    
T  34021449 aacata-aatgattttctgcattcaggacgagtctgtgtattggtttggggtgtgtacctatat 34021511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 17220725 - 17220806
Alignment:
Q  140 gggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||| ||||||||||||| |||| | || || |||||| |||||||||||| ||| |||| ||| |||||||||||    
T  17220725 gggttcggggtgggtacctatataaccatcatccatcccatacccgtgttttgaaatcggggaaaatccatacccataccca 17220806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 5858706 - 5858646
Alignment:
Q  161 atacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||| ||| ||||| |||||| ||||||| |||| ||||||||||||||||||||||||    
T  5858706 atacccgttacccgtcccatacccgtgtttttaaatcgggaaaaacccaaacccataccca 5858646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 221
Target Start/End: Complemental strand, 8545454 - 8545343
Alignment:
Q  110 attttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaaccca 209  Q
    ||||||| ||||  |||||| |||| |||||||||||||| ||||| |||||| ||| |||  |||  |||||| |||||||||||| ||  ||||||||    
T  8545454 attttctacatttgggacgagtttgagtatgggttcggggtgggtatctatatccccgttactcgttccatacccgtgttttgaaatcggagaaaaccca 8545355  T
Q  210 aacccataccca 221  Q
    |||  |||||||    
T  8545354 aacttataccca 8545343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 35215555 - 35215629
Alignment:
Q  146 ggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| | ||| |||||||||||| |||||||||||| ||| ||||||||||  ||||||||    
T  35215555 ggggtgggtacctatatactcgttacccgtctcatacccgtgttttgaaatcggg-aaaacccaaaatcataccca 35215629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 27777282 - 27777192
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| |||||||| |||  |  ||| | ||| | ||||||||||||||||| ||||||||| ||||| ||||||||    
T  27777282 tttgggtatgggttcggggtgggtacctgtatctctgttacctgtcccgtacctgtgttttgaaatcgggaaaaactcaaacacataccca 27777192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 29089589 - 29089670
Alignment:
Q  7 atttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac 91  Q
    |||||||||||| ||| ||||| |||||||||||||||||||| ||    ||||| ||||||||  |||||| ||||||||||||    
T  29089589 atttgttagacccattaatttagttgctcctttaaatatcaatgat---agttttaataacacaataattatcaaacaaaataac 29089670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 37961046 - 37960956
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| ||||| |||||||| | |||||||||||||  ||| | ||| |||||| ||||||| |||| ||| ||||||||||| ||||||||    
T  37961046 tttgggtatgagttcggggtgtgtacctatatacctgttacctgtcccatacccgtgtttttaaatcggggaaaacccaaactcataccca 37960956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 2075867 - 2075914
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacc 183  Q
    |||||||||||||| |||||||||||||||| ||| ||||| ||||||    
T  2075867 gtatgggttcggggtgggtacctatatacccgttacccgtcccatacc 2075914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 204
Target Start/End: Complemental strand, 11255153 - 11255019
Alignment:
Q  72 caattattaaacaaaataacg--catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccatt 169  Q
    ||||||| ||||||||||||   |||||||||||| | ||||||| | ||||  |||||  | || |||||||||||  | |||||||||||||||  ||    
T  11255153 caattatcaaacaaaataacatacatatcaacacaaagtaattttttacatttgggacgggtatgggtatgggttcgtagtgggtacctatatacctgtt 11255054  T
Q  170 aaccgtctcatacctgtgttttgaaattgggaaaa 204  Q
    | ||||| |||||| |||||| ||||  |||||||    
T  11255053 atccgtcccatacccgtgtttggaaagcgggaaaa 11255019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 6388580 - 6388510
Alignment:
Q  151 gggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||||| ||| ||| ||||||  |||| ||||||| |||| ||| || |||||||||||||||||    
T  6388580 gggtacctatatccccgttacccgtcttgtacccgtgttttaaaatcggggaagacccaaacccataccca 6388510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 14155584 - 14155626
Alignment:
Q  179 atacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||| |||||||||||| ||||||||||||||| ||||||||    
T  14155584 atacccgtgttttgaaatcgggaaaaacccaaactcataccca 14155626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 30904029 - 30904115
Alignment:
Q  110 attttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    ||||||| ||||| ||||  ||||| ||||||||  |||| |||||| |||||  |||||| ||||||| |||| ||||||||||||    
T  30904029 attttctacattcgggactgatttgggtatgggtatggggtgggtacttatatctccattacccgtctcgtacccgtgttttgaaat 30904115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 14186205 - 14186246
Alignment:
Q  8 tttgttagaccgattgatttatttgctcctttaaatatcaat 49  Q
    ||||||||||| ||||||||| || |||||||||||||||||    
T  14186205 tttgttagaccaattgatttagttactcctttaaatatcaat 14186246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 219
Target Start/End: Original strand, 28345474 - 28345583
Alignment:
Q  110 attttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaaccca 209  Q
    ||||||| |||||||||| | |||| |||||||||||||| |||| ||||||| | | ||| || ||   |||| |||||||| ||| ||| |||| |||    
T  28345474 attttctacattcaggacaagtttgggtatgggttcggggtgggtgcctatatcctcgttacccatcctgtacccgtgttttggaatcgggtaaaatcca 28345573  T
Q  210 aacccatacc 219  Q
    |||| |||||    
T  28345574 aacctatacc 28345583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40248562 - 40248514
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaat 49  Q
    ||||| ||||||||||| || ||||||| ||| ||||||||||||||||    
T  40248562 tttaacatttgttagactgaatgatttagttgatcctttaaatatcaat 40248514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 14505960 - 14506174
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catat 97  Q
    ||||| ||||||||||| |||||||||| |||||||||| |||||||||  | |   ||||||||||||  ||||||| |||||||||||||   |||||    
T  14505960 tttaacatttgttagactgattgatttagttgctcctttcaatatcaatgttag---tttttataacacgacaattatcaaacaaaataacgtgacatat 14506056  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||||| | || |||||||||||  |||||  |||  |||||||||||||| ||||||||| ||||   ||| ||||| |||||||||||||||||||     
T  14506057 caacacaaagtagttttctgcatttgggacgggtttaagtatgggttcggggtgggtacctaaatacttgttacccgtcccatacctgtgttttgaaatc 14506156  T
Q  198 gggaaaaacccaaaccca 215  Q
    ||| ||||||||||||||    
T  14506157 ggggaaaacccaaaccca 14506174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 221
Target Start/End: Complemental strand, 12678297 - 12678088
Alignment:
Q  12 ttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catatcaacacataat 108  Q
    ||||||||||||||||| |||||||||||||||||||| ||     ||||||||||||  ||||||| ||||||||||||    |||||||| | | |||    
T  12678297 ttagaccgattgatttagttgctcctttaaatatcaatgataa---tttttataacacgacaattatcaaacaaaataacatgacatatcaatataaaat 12678201  T
Q  109 aattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaaccc 208  Q
    ||||||||  |||| |||||  |||| |||||||||| ||| |||||||||||||||| ||| ||||| ||||||||||| ||||||| ||| ||||| |    
T  12678200 aattttctcaattcgggacgggtttgggtatgggttcagggtgggtacctatataccctttacccgtcccatacctgtgtcttgaaatcggggaaaacgc 12678101  T
Q  209 aaacccataccca 221  Q
    |||| ||||||||    
T  12678100 aaactcataccca 12678088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 24603070 - 24602856
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||||||||||||| ||| ||||||||||||||||   ||  ||||||||||||| |||||||| ||||||||||||   ||| ||    
T  24603070 tttaacatttgttagaccgattgatttagttgttcctttaaatatcaat---ggtagtttttataacacgtcaattatcaaacaaaataacatggcacat 24602974  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | ||||||||| |||||  || |  |||| |||||||||||||| ||||| |||||||||  ||| ||||| ||||||  |||||||||||     
T  24602973 caacataaagtaattttctacattcgtgatgggtttgggtatgggttcggggtgggtatctatatacctgttacccgtcacatacccatgttttgaaatc 24602874  T
Q  198 gggaaaaacccaaaccca 215  Q
     || ||||||||||||||    
T  24602873 tgggaaaacccaaaccca 24602856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 7394101 - 7393887
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacgc---atat 97  Q
    ||||| |||||||||||||||||||||| ||| ||||||||||||||||  | |   ||||||||||||   |||||| |||||||||||      |||     
T  7394101 tttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttag---tttttataacacggtaattatcaaacaaaataatatgatatac 7394005  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | ||||| ||| ||||||||||| || |||| |||||||||||||| || ||||||||||||||||| ||||||| |||  ||||||||||||     
T  7394004 caacataaaataaatttatgcattcaggatgagtttgagtatgggttcggggtggatacctatatacccattatccgtctcttactcgtgttttgaaatc 7393905  T
Q  198 gggaaaaacccaaaccca 215  Q
    ||| |||| |||||||||    
T  7393904 ggggaaaatccaaaccca 7393887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 14032430 - 14032578
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||| ||    |||||||||||||| ||||||| ||||||||||||    |||||    
T  14032430 tttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgat---agtttttataacacaacaattatcaaacaaaataacatgacatat 14032526  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcgggg 149  Q
    ||||| | | ||||||| ||||||  |||||  |||| ||||||||||||||    
T  14032527 caacataaagtaattttatgcatttgggacgggtttgggtatgggttcgggg 14032578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 32532549 - 32532631
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatac 218  Q
    |||||||||||||| |||||||||||||||||||| ||||| |||||| |||||||||||| ||| |||||||| || |||||    
T  32532549 gtatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcggggaaaacccatactcatac 32532631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 217
Target Start/End: Original strand, 32853786 - 32853934
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | | ||||||| | ||||  |||||  |||| |||||||||||||| |||||||||||||||| |    
T  32853786 caattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgt 32853885  T
Q  169 taaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    || ||||| |||||| ||||||||| || ||| |||||||| |||||||    
T  32853886 tacccgtcccatacccgtgttttgagatcggggaaaacccatacccata 32853934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 73 - 221
Target Start/End: Complemental strand, 5863528 - 5863377
Alignment:
Q  73 aattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccatt 169  Q
    |||||| ||||||||||||    |||||||||| | |||| |||| | ||||  |||||  |||| ||||||||||| || ||||| |||||||||| ||    
T  5863528 aattatcaaacaaaataacataacatatcaacataaaatatttttttacatttgggacgggtttgggtatgggttcgaggtgggtatctatatacccgtt 5863429  T
Q  170 aaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    | ||||| |||||| |||||||||||| ||| |||||||| |||||||||||    
T  5863428 acccgtcccatacccgtgttttgaaatcggggaaaacccatacccataccca 5863377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 30816131 - 30816348
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataa---cgcatat 97  Q
    ||||| ||||||||||||||||||||||  ||||||||||||| ||   |||||  |||||||||||||  |||||||  ||||||||||   | |||||    
T  30816131 tttaacatttgttagaccgattgatttaggtgctcctttaaatgtc---aatggtagtttttataacacggcaattatccaacaaaataacatcacatat 30816227  T
Q  98 caacaca---taataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaa 194  Q
    ||||| |   || |  |||| ||||||| |||||  ||||  ||||||||||||| |||| ||||||||||||||| || || |||||| ||||||  ||    
T  30816228 caacataaagtagtttttttttgcattcgggacgggtttggatatgggttcggggtgggttcctatatacccattacccatcccatacccgtgttt--aa 30816325  T
Q  195 attgggaaaaacccaaacccata 217  Q
    | |||| ||||| ||||||||||    
T  30816326 aatggggaaaactcaaacccata 30816348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 2367199 - 2367420
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---cata 96  Q
    ||||| |||||||||||  | ||||||| ||  ||||||||||||||||   ||  |||||||| ||||   ||||||| ||||||||||||    ||||    
T  2367199 tttaacatttgttagacaaaatgatttagtttatcctttaaatatcaat---ggtagtttttattaacatgacaattatcaaacaaaataacataacata 2367295  T
Q  97 tcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    || ||| | | ||||||| | ||||  |||||  |||| |||||||||||||| |||||| ||||||||| ||| ||||| |||||| ||||||||| ||    
T  2367296 tccacataaagtaattttttccatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagat 2367395  T
Q  197 tgggaaaaacccaaacccataccca 221  Q
     ||| |||||||| |||||||||||    
T  2367396 cggggaaaacccatacccataccca 2367420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 14411047 - 14410960
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac 91  Q
    ||||| |||||||||||||||||||||| || ||||||||||||||||| |||   |||||||||||||  ||||||| ||||||||||||    
T  14411047 tttaacatttgttagaccgattgatttagtttctcctttaaatatcaatgatg---gtttttataacacgacaattatcaaacaaaataac 14410960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 14254832 - 14255051
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||| ||||||||| ||||||| | |||||||||||||||||| ||    |||||||||||||||||| | | ||||||||||||    |||||    
T  14254832 tttaacatttattagaccgaatgatttaatcgctcctttaaatatcaatgat---agtttttataacacatcaaatttcaaacaaaataacatgacatat 14254928  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | | ||| | ||||||  ||||||||||| ||||||||||  || ||||||||||||  || |||  |||| |||||| ||| ||||||||     
T  14254929 caacataaagttattatttgcatttgggacgaatttgggtatgggttcatggtgggtacctatatttccgttacacgtcccatacccgtg-tttgaaatc 14255027  T
Q  198 gggaaaaacccaaacccataccca 221  Q
     |  ||||| ||||||||||||||    
T  14255028 agagaaaactcaaacccataccca 14255051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 221
Target Start/End: Complemental strand, 28079781 - 28079690
Alignment:
Q  130 atttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||| |||||||||||||| |||||||||||| ||| ||| ||||| | ||||  ||||||||||| ||| ||||||||||||||||||||    
T  28079781 atttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaaacccataccca 28079690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 221
Target Start/End: Complemental strand, 10142727 - 10142512
Alignment:
Q  7 atttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---catatcaaca 102  Q
    |||||||||||  | ||||||| ||| ||||||||||||||||   ||  |||||||| ||||   ||||||| ||||||||||||    ||||||||||    
T  10142727 atttgttagacaaaatgatttagttgatcctttaaatatcaat---ggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaaca 10142631  T
Q  103 cataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaa 202  Q
     | ||||||||| | ||||  ||||   |||| ||||| |||||||| |||||||||||||||| ||| | ||| |||||| || |||||| || ||| |    
T  10142630 taaaataattttttacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgttacctgtcccatacccgttttttgagatcgggga 10142531  T
Q  203 aaacccaaacccataccca 221  Q
    ||||||| |||||||||||    
T  10142530 aaacccatacccataccca 10142512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 12141353 - 12141479
Alignment:
Q  95 tatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaa 194  Q
    |||||||| | ||||||||| | ||||  |||||  |||| |||||||||||||| |||||||||||||||| | | ||||| |||| | |||||||||     
T  12141353 tatcaacataaaataattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgtcacccgtcccatatccgtgttttgag 12141452  T
Q  195 attgggaaaaacccaaacccataccca 221  Q
    |||||| |||||||| |||| ||||||    
T  12141453 attggggaaaacccatacccgtaccca 12141479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 15498336 - 15498418
Alignment:
Q  139 tgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||||||||  |||||||||||||||||||| | |||||||||| |||||||||||| ||| |||||||| | |||||||||    
T  15498336 tgggttcgggatgggtacctatatacccattacctgtctcatacccgtgttttgaaatcggggaaaacccatatccataccca 15498418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 221
Target Start/End: Original strand, 24225640 - 24225792
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | ||||||||| | ||||  |||||  |||| | |||||||||||| |||||||||||||||| |    
T  24225640 caattatcaaacaaaataacataacatatcaacataaaataattttttacatttgggacgggtttgggcatgggttcggggtgggtacctatatacccgt 24225739  T
Q  169 taaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    || ||||| |||| | ||||||||| || ||| |||| ||| |||||||||||    
T  24225740 tacccgtcccatatccgtgttttgagatcggggaaaatccatacccataccca 24225792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 14410950 - 14410865
Alignment:
Q  120 ttcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat-tgggaaaa 204  Q
    |||||||||  |||| |||||||||||||| |||||||||||||||| ||| ||||| |||||| |||||||||||| ||||||||    
T  14410950 ttcaggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatctgggaaaa 14410865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 219
Target Start/End: Original strand, 27738666 - 27738864
Alignment:
Q  22 tgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---catatcaacacataataattttctg 117  Q
    ||||||| ||||||||||||||||||||   ||  |||||||| ||||   ||||||| | ||||||||||    |||||||||| | | ||||||| |     
T  27738666 tgatttagttgctcctttaaatatcaat---ggtagtttttattaacatgacaattatcatacaaaataacataacatatcaacataaagtaatttttta 27738762  T
Q  118 cattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    ||||  |||||  |||| |||||||||||||| |||||| |||||| |  ||| ||||| |||||| |||||||||||| ||| |||||||| |||||||    
T  27738763 catttgggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccata 27738862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 9442441 - 9442529
Alignment:
Q  138 atgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatacccatacca 226  Q
    |||||||||| | |||||||| ||||||| ||| ||||| |||||| |||||||||||| ||||||| |||| ||||||||||| ||||    
T  9442441 atgggttcggagtgggtacctctatacccgttacccgtcccatacccgtgttttgaaatcgggaaaatcccatacccatacccaaacca 9442529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 217
Target Start/End: Original strand, 11762342 - 11762535
Alignment:
Q  24 atttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatatcaacacataataattttctgcat 120  Q
    ||||| |||||||| |||||||||||   ||  |||||||||||||  |||||||  |||||||||||   ||||||||||| | | ||||||||| |||    
T  11762342 atttagttgctcctataaatatcaat---ggtagtttttataacacgacaattatataacaaaataacatggcatatcaacataaagtaattttctacat 11762438  T
Q  121 tcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    |  ||| |  |||| ||||| |||||||| ||  |||||||||||| ||| ||||| ||||||  ||||| ||||| |||||||||| ||| |||||    
T  11762439 ttgggatgggtttgggtatgagttcggggtggacacctatatacccgttacccgtcccatacccttgtttagaaatcgggaaaaacctaaatccata 11762535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 221
Target Start/End: Complemental strand, 256597 - 256486
Alignment:
Q  110 attttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaaccca 209  Q
    ||||||| |||| |||| |  |||| ||||||||| |||| |||||||||||| ||||||| ||||||| ||||  ||||||||||| ||| ||||| ||    
T  256597 attttctacatttaggaggggtttgggtatgggtttggggtgggtacctatatgcccattacccgtctcgtacccatgttttgaaatcggggaaaactca 256498  T
Q  210 aacccataccca 221  Q
    ||| ||||||||    
T  256497 aactcataccca 256486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 3484007 - 3483917
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| |||||||||||||||| ||| || || |||||| |||||| || || ||| |||||||| || ||||||||    
T  3484007 tttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaaacccatacacataccca 3483917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 27534688 - 27534778
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||| ||||||| |||||||||||||||| ||| ||||| |||||| |||||| || || ||| ||||| || |||||||||||    
T  27534688 tttgggtatggattcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcatacccataccca 27534778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 219
Target Start/End: Original strand, 13769055 - 13769164
Alignment:
Q  110 attttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaaccca 209  Q
    ||||||| |||||||||||  ||||  ||||||||| ||| ||||||||||||  || ||| ||||| ||||||  ||||||||| | ||| |||||| |    
T  13769055 attttctacattcaggacgggtttggatatgggttctgggtgggtacctatatgtccgttacccgtcccatacccatgttttgaagtcggggaaaaccga 13769154  T
Q  210 aacccatacc 219  Q
    ||||||||||    
T  13769155 aacccatacc 13769164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 20349067 - 20349156
Alignment:
Q  130 atttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatacc 219  Q
    ||||| ||||| |||||||| |||||||||||| ||| |||  |||| |||||| |||||||||||| ||| |||| |||||| ||||||    
T  20349067 atttgggtatgagttcggggtgggtacctatatccccgttactcgtcccatacccgtgttttgaaatcggggaaaatccaaactcatacc 20349156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 32959844 - 32959948
Alignment:
Q  110 attttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaaccca 209  Q
    ||||||| |||| | |||| ||||| |||||||||||||| || ||||||||| ||| ||| ||||  | |||| ||||||||||||| || ||||||||    
T  32959844 attttctacatttatgacggatttg-gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaaccca 32959942  T
Q  210 aaccca 215  Q
    ||||||    
T  32959943 aaccca 32959948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 221
Target Start/End: Original strand, 12309514 - 12309666
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | | ||||||| | ||||  |||||  |||| |||| ||||||||| |||||| ||||||||  |    
T  12309514 caattatcaaacaaaataacatgacatatcaacataaagtaattttttacatttgggacgggtttgggtatcggttcggggtgggtacatatatacctgt 12309613  T
Q  169 taaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    || ||||  |||||| ||||||||||||  || || ||||| |||||||||||    
T  12309614 tacccgttccatacccgtgttttgaaatcagggaatacccatacccataccca 12309666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 32053092 - 32053182
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| ||||||||| |||| |||||| ||||||||| ||| ||||| |||| |  ||||||||||| ||| |||||||| ||||| |||||    
T  32053092 tttgggtatgggtttggggtgggtacatatatacccgttacccgtcccatatccatgttttgaaatcggggaaaacccatacccaaaccca 32053182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 221
Target Start/End: Complemental strand, 10188194 - 10188074
Alignment:
Q  94 atatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttga 193  Q
    ||||||||| | ||||||||| | ||||  ||| |  |||| |||||||||||||| ||||||||||||||       ||||| |||||| |||||||||    
T  10188194 atatcaacataaaataattttttacatttgggatgggtttgggtatgggttcggggtgggtacctatatac-------ccgtcccatacccgtgttttga 10188102  T
Q  194 aattgggaaaaacccaaacccataccca 221  Q
     || ||| |||||||| |||||||||||    
T  10188101 gatcggggaaaacccatacccataccca 10188074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 14034521 - 14034590
Alignment:
Q  146 ggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaaccca 215  Q
    |||| |||||||||||||||| ||| ||||||||||| ||||| || |||| ||| ||||| ||||||||    
T  14034521 ggggtgggtacctatatacccgttacccgtctcatacttgtgtcttaaaatcggggaaaactcaaaccca 14034590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 14245121 - 14245208
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac 91  Q
    ||||| |||| ||||||||| ||||||| | ||||||||||||||   ||||||  |||||||||||||  ||||| | ||||||||||||    
T  14245121 tttaacatttattagaccgaatgatttagtcgctcctttaaatat---taatggtagtttttataacacgacaattttcaaacaaaataac 14245208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 30986284 - 30986347
Alignment:
Q  158 tatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||||||| ||| ||||| |||||| ||||||||| || ||| |||||||| |||||||||||    
T  30986284 tatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccataccca 30986347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 217
Target Start/End: Original strand, 19366987 - 19367099
Alignment:
Q  105 taataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaa 204  Q
    |||||||||||| |||||| || |  |||| ||||||||| | || ||| | |||||| |   ||| |||||||||||| ||||||| |||||||| |||    
T  19366987 taataattttctacattcaagaagggtttgggtatgggtttgaggtgggcaactatattcatgttacccgtctcatacccgtgttttaaaattggggaaa 19367086  T
Q  205 acccaaacccata 217  Q
    | ||| |||||||    
T  19367087 atccatacccata 19367099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32052930 - 32052978
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaat 49  Q
    ||||| ||||||||||| || ||||||||||  ||||||||||||||||    
T  32052930 tttaacatttgttagacggaatgatttatttaatcctttaaatatcaat 32052978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 14649 - 14869
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catat 97  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||||||||   ||  ||||||| ||||||  |||||| |||||||||||     |||||    
T  14649 tttaacatttgttaaaccgattgatttagttgctcctttaaatatcaat---ggtagtttttacaacacaataattatcaaacaaaataatatatcatat 14745  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    |||||   ||||||||||| ||||  |||||| |||| ||||| ||||  || |||||||||||||||||||| ||||| ||| | |||||||||||||     
T  14746 caacattaaataattttctacatttgggacgagtttgggtatgtgttcaaggtgggtacctatatacccattatccgtcccatgcatgtgttttgaaatc 14845  T
Q  198 gggaaaaacccaaacccataccca 221  Q
    ||  ||||||||||| ||||||||    
T  14846 ggagaaaacccaaactcataccca 14869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 7e-33; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 2412941 - 2412721
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catat 97  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||  | |   ||||||| ||||| ||||||| ||||||||||||    |||||    
T  2412941 tttaatatttgttagaccgattaatttagttgctcctttaaatatcaattgtag---tttttatgacacaacaattatcaaacaaaataacatgacatat 2412845  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||| | | | ||||||||||||| | |||||| |||| |||| ||||| ||  |||||| ||||||||| |||    || |||||| |||||||||||||    
T  2412844 caatataaagtaattttctgcatacgggacgagtttgggtattggttcaggatgggtacatatatacccgttatttatcccatacccgtgttttgaaatt 2412745  T
Q  198 gggaaaaacccaaacccataccca 221  Q
    ||||||||  ||||||||||||||    
T  2412744 gggaaaaattcaaacccataccca 2412721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 215
Target Start/End: Complemental strand, 38006676 - 38006470
Alignment:
Q  9 ttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catatcaacacat 105  Q
    |||||||||| ||||||||| ||||||||||||||||||||  |||   ||||||||| ||  | ||||| ||||||||||||    ||||| |||| |     
T  38006676 ttgttagaccaattgatttagttgctcctttaaatatcaatggtgg---tttttataatacgactattatcaaacaaaataacatgacatattaacataa 38006580  T
Q  106 aataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaa 205  Q
    | ||||||||  ||||| ||||| ||||| |||||||||||||| ||||||||||||| |  |||  |||| |||||| || ||||||||||||| ||||    
T  38006579 attaattttcaacattcgggacggatttgggtatgggttcggggtgggtacctatatatctgttacgcgtcccatacccgtattttgaaattggggaaaa 38006480  T
Q  206 cccaaaccca 215  Q
    ||||||||||    
T  38006479 cccaaaccca 38006470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 27088566 - 27088414
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac--gcatatc 98  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||| ||    |||||||||||| | ||||||| ||||||||||||   ||||||    
T  27088566 tttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgat---agtttttataacataacaattatcaaacaaaataacatacatatc 27088470  T
Q  99 aacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggt 154  Q
    |||| | ||||||||||| |||||  ||||  |||| |||||||||||||| ||||    
T  27088469 aacataaaataattttctacattcgagacgggtttgggtatgggttcggggtgggt 27088414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 2985021 - 2985235
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||    |||||||||||||| ||||||| ||| ||||||||    |||||    
T  2985021 tttaatatttgttagaccgattgatttagttgctcctttaaatatcaatgat---agtttttataacacaacaattatcaaataaaataacatgacatat 2985117  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||| | | |||||||||||  ||||  |||  ||||| |||||| ||||||  | |||||||||||||| ||| ||||| || |||  ||| |||||||     
T  2985118 caatataaaataattttctatattcgagacagatttgggtatggtttcgggatgagtacctatatacccgttacccgtcccaaacccatgtcttgaaatc 2985217  T
Q  198 gggaaaaacccaaaccca 215  Q
    ||  ||||| ||||||||    
T  2985218 ggagaaaactcaaaccca 2985235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 18206891 - 18207112
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatc-aattattaaacaaaataac---gcata 96  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||   |  |||||||||||||  | |||||||||||||||||||   |||||    
T  18206891 tttaatatttgttagaccgattgatttagttgctcctttaaatatcatta---gtagtttttataacacggcaaattattaaacaaaataacatggcata 18206987  T
Q  97 tcaacacataa-taattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaa 195  Q
    |||||| | || ||||||||| ||||| |||||  ||||  ||||||||| ||| |||||||||||||||  ||| | ||| |||||  | |||||||||    
T  18206988 tcaacatagaagtaattttctacattcgggacgggtttgaatatgggttc-gggtgggtacctatatacctgttacctgtcccatacacgagttttgaaa 18207086  T
Q  196 ttgggaaaaacccaaacccataccca 221  Q
    | | | ||||||||||| ||| ||||    
T  18207087 tcgaggaaaacccaaactcatgccca 18207112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 12447255 - 12447445
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||| |||||||||||  ||||||||||||||||   |||||  |||||||||||||  ||||||| ||||||||||||    |||||    
T  12447255 tttaacatttgttagatcgattgatttaactgctcctttaaatatc---aatggtagtttttataacacgacaattatcaaacaaaataacatgacatat 12447351  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgtttt 191  Q
     |||| | | || ||||||  |||  |||||  |||| |||| ||||||||| |||||||||||||||||||| | ||| ||||||||||||||    
T  12447352 taacataaagtagttttctatatttgggacgggtttgggtataggttcggggtgggtacctatatacccattacctgtcccatacctgtgtttt 12447445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 35194204 - 35194014
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||| ||||||| ||||||||| ||  | ||||||||||||||   ||  |||||||||||||| ||||||| ||||||||||||   ||||||    
T  35194204 tttaacattttttagaccaattgatttagtttattctttaaatatcaat---ggtagtttttataacacagcaattatcaaacaaaataacatagcatat 35194108  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgtttt 191  Q
     |||| | | ||||||||| ||||| |||||  |||| ||||| ||| |||| |||||||||||||||| ||| ||||| |||||| |||||||    
T  35194107 taacataaagtaattttctacattcgggacgggtttgagtatgagtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttt 35194014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 30115357 - 30115522
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| ||||||||||| ||| |||||| |||||||||||||||| |||  |||   ||||||||||||  ||||||| ||||||||||||   ||||||    
T  30115357 tttaacatttgttagactgatcgatttagttgctcctttaaatataaatggtgg---tttttataacacggcaattatcaaacaaaataacatagcatat 30115453  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatataccc 166  Q
    ||||| | ||||||||| ||||||| |||||  ||||  ||||||||||||  ||||||| ||||||||    
T  30115454 caacataaaataattttatgcattcgggacgggtttgaatatgggttcgggatgggtaccaatataccc 30115522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 3573098 - 3573243
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| |||||||||||||||||||||| |||||||||| ||||||   |||||  |||||||||||||  ||||||| ||||| ||||||    |||||    
T  3573098 tttaacatttgttagaccgattgatttagttgctcctttgaatatc---aatggtagtttttataacacgacaattatcaaacagaataacatgacatat 3573194  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcg 146  Q
    ||||| | ||||||||||| ||||| ||| |  |||| |||||||||||    
T  3573195 caacataaaataattttctacattcgggaggggtttgagtatgggttcg 3573243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 4582992 - 4583209
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---cata 96  Q
    ||||| ||||| ||||| || ||||||| ||| ||||||||||||||||   ||  |||||||| ||||   ||||||| ||||||||||||    ||||    
T  4582992 tttaacatttgatagacggaatgatttagttgatcctttaaatatcaat---ggtagtttttattaacatgacaattatcaaacaaaataacatgacata 4583088  T
Q  97 tcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    |||||| | | ||||||| | ||||  |||||  | || ||||||||| |||| ||| |||||||||||| ||| ||||| |||||| ||||||||||||    
T  4583089 tcaacataaagtaattttttacatttgggacgggtatgggtatgggtttggggtgggaacctatatacccgttacccgtcccatacccgtgttttgaaat 4583188  T
Q  197 tgggaaaaacccaaacccata 217  Q
     ||| |||||||| |||||||    
T  4583189 cggggaaaacccatacccata 4583209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 28045528 - 28045747
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg---catat 97  Q
    ||||| |||||||||||  | ||||||| ||| |||||||||||||||| || | | || || ||||| | ||||||| ||||||||||||    |||||    
T  28045528 tttaacatttgttagacgtaatgatttagttgatcctttaaatatcaatgatagtttttatt-taacataacaattataaaacaaaataacatgacatat 28045626  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | ||||||| | ||||  |||||  | || |||||||||||||  |||||||||||||||| ||| ||||| ||||   |||||||||| |     
T  28045627 caacataaagtaattttttacatttgggacgggtatgggtatgggttcgggt-gggtacctatatacccgttacccgtcccatattcgtgttttgaatta 28045725  T
Q  198 gggaaaaacccaaacccatacc 219  Q
    |||||||||||| |||||||||    
T  28045726 gggaaaaacccatacccatacc 28045747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 217
Target Start/End: Original strand, 4920768 - 4920916
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | | ||||||| | ||||  |||||  |||| |||||||||||||| || ||||||||||||| |    
T  4920768 caattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgt 4920867  T
Q  169 taaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    || ||||| |||||| ||||||||| || ||| |||||||| |||||||    
T  4920868 tacccgtcccatacccgtgttttgagatcggggaaaacccatacccata 4920916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 221
Target Start/End: Original strand, 40517685 - 40517900
Alignment:
Q  7 atttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---catatcaaca 102  Q
    |||||||||||  | ||||||| ||| ||||||||||||||||   ||  |||||||| ||||   ||||||| ||||||||||||    ||||||||||    
T  40517685 atttgttagacaaaatgatttagttgatcctttaaatatcaat---ggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaaca 40517781  T
Q  103 cataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaa 202  Q
     | ||||||||| | | ||  |||||  |||| |||||||||||||| ||||| |||||||||| ||| || || |||||| ||||||||  || ||| |    
T  40517782 taaaataattttttacctttgggacgggtttgagtatgggttcggggtgggtaactatatacccgttacccatcccatacccgtgttttgggatcgggga 40517881  T
Q  203 aaacccaaacccataccca 221  Q
    ||||||| |||||||||||    
T  40517882 aaacccatacccataccca 40517900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 35311696 - 35311891
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg--catat 97  Q
    ||||| ||||||||||| || ||||||| ||| ||||||||||||||||   ||  |||||||| ||||   ||||||| ||||||||||||   |||||    
T  35311696 tttaacatttgttagacggaatgatttagttgatcctttaaatatcaat---ggtagtttttattaacatgacaattatcaaacaaaataacatacatat 35311792  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    ||||| | ||||||||| | ||||  |||||  | || |||||||||||| | ||||||||||||| |  ||| ||||| |||||| ||||||||||||    
T  35311793 caacataaaataattttttacatttgggacgggtatgagtatgggttcggagtgggtacctatatatctgttacccgtcccatacccgtgttttgaaat 35311891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 42717847 - 42717627
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattat-taaacaaaataac---gcata 96  Q
    ||||| ||||||||||||| |||||||| || ||||||||||||||||| ||    |||||||||||||  |||||||  |||||||||| |   ||||     
T  42717847 tttaacatttgttagaccggttgatttagtttctcctttaaatatcaatgat---agtttttataacacgacaattatcaaaacaaaatatcatggcatg 42717751  T
Q  97 tcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaat 196  Q
    |||||| | | ||||||||||||||||||||| ||||| | |||||||| ||| || |   |||||||       ||||| |||||||||||||||||||    
T  42717750 tcaacata-agtaattttctgcattcaggacggatttgagcatgggttcagggtggatgtttatatac-------ccgtc-catacctgtgttttgaaat 42717660  T
Q  197 tgg----gaaaaacccaaacccatacccatacc 225  Q
    |||     |||||||||||||||||||||||||    
T  42717659 tggaaaaaaaaaacccaaacccatacccatacc 42717627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 6156134 - 6155915
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    ||||| ||||||||||| || |||||||||||||||||||||||||||| ||   | ||||  || ||   ||||||| ||||||||||||    |||||    
T  6156134 tttaacatttgttagacggaatgatttatttgctcctttaaatatcaatgat--attttttattaccatgacaattatcaaacaaaataacatgtcatat 6156037  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
     |||| | | ||||||||  ||||   ||||  |||| |||||||||||||| |||||| ||||||||  ||| | |||  ||||| ||||||||||||     
T  6156036 aaacataaagtaattttcaacatttgtgacggttttgggtatgggttcggggtgggtacatatatacc--ttacctgtcctatacccgtgttttgaaatc 6155939  T
Q  198 gggaaaaacccaaacccataccca 221  Q
    ||| ||||||||||| ||||||||    
T  6155938 ggggaaaacccaaacacataccca 6155915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 8453587 - 8453386
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataacg-catatca 99  Q
    ||||| ||||||| |||||| ||||||| || |||||||||||||||||   ||   |||||||||||   ||||||||||||||||||||| ||||| |    
T  8453587 tttaacatttgtttgaccgaatgatttagttactcctttaaatatcaat---ggtaatttttataacatgacaattattaaacaaaataacgacatatta 8453491  T
Q  100 acacataataattttctgcattcaggacga-atttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattg 198  Q
    ||| | | ||||||||| ||||  ||||||  |||| |||||  || |||| | ||||||||||| |  ||| || || |||||| |||||||||||| |    
T  8453490 acataaactaattttctacatttgggacgagttttgagtatgactttggggtgtgtacctatatatctgttacccatcccatacccgtgttttgaaatcg 8453391  T
Q  199 ggaaa 203  Q
    |||||    
T  8453390 ggaaa 8453386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 17853507 - 17853288
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg--catat 97  Q
    ||||| ||||||||||| || ||||||| ||| ||||||||||||||||   ||  |||||||| ||||   ||||||| ||||||||||||   |||||    
T  17853507 tttaacatttgttagacggaatgatttagttgatcctttaaatatcaat---ggtagtttttattaacatgacaattatcaaacaaaataacatacatat 17853411  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | ||||||| | ||||  |||||  | || |||||||||||| | ||||| ||||||| || ||| ||||| |||||| ||| ||||||||     
T  17853410 caacataaagtaattttttacatttgggacgggtatgggtatgggttcggagtgggtatctatatatccgttacccgtcccatacccgtg-tttgaaatc 17853312  T
Q  198 gggaaaaacccaaacccataccca 221  Q
    ||| |||||||| | |||||||||    
T  17853311 ggggaaaacccatatccataccca 17853288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 221
Target Start/End: Complemental strand, 42987689 - 42987474
Alignment:
Q  7 atttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---catatcaaca 102  Q
    |||||||||||  | ||||||| ||| |||||||||||||||| || |   ||||||| ||||   ||||||| ||||||||||||    ||||||||||    
T  42987689 atttgttagacaaaatgatttagttgatcctttaaatatcaatgatag---tttttattaacatgacaattatcaaacaaaataacataacatatcaaca 42987593  T
Q  103 cataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaa 202  Q
     | ||||||||| | ||||  |||||  |||| |||||||||||||  ||||||||||||| || |||  |||| |||||| ||||||||| || ||| |    
T  42987592 taaaataattttttacatttgggacgggtttgggtatgggttcgggatgggtacctatatatccgttacacgtcccatacccgtgttttgagatcgggga 42987493  T
Q  203 aaacccaaacccataccca 221  Q
    ||| ||| |||| ||||||    
T  42987492 aaatccatacccgtaccca 42987474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 6092729 - 6092559
Alignment:
Q  6 tatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataacg---catatcaac 101  Q
    ||||||||||||  | ||||||| ||| ||||||||||||||||   ||  |||||||| ||||   ||||||| ||||||||||||    |||||||||    
T  6092729 tatttgttagacaaaatgatttagttgatcctttaaatatcaat---ggtagtttttattaacattgcaattatcaaacaaaataacataacatatcaac 6092633  T
Q  102 acataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgt 175  Q
    | | | ||||||| | ||||  ||||| ||||| |||||||||||||| |||||||||||||||| ||| ||||    
T  6092632 ataaagtaattttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgt 6092559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 38972926 - 38973014
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatacc 219  Q
    |||| |||||||||||||| |||||||||||| ||| ||| |  || ||||||  ||||||||||| ||||||||||||||| ||||||    
T  38972926 tttgagtatgggttcggggtgggtacctatattcccgttacctatcccatacccatgttttgaaatcgggaaaaacccaaactcatacc 38973014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 217
Target Start/End: Complemental strand, 20973582 - 20973495
Alignment:
Q  130 atttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    ||||| |||||||||||||| |||||||||||||||| ||| || || |||||| ||||||  |||| ||| |||||||| |||||||    
T  20973582 atttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttgaaaatcggggaaaacccatacccata 20973495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 221
Target Start/End: Complemental strand, 22695048 - 22694897
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | ||||||||| | ||||  |||||  |||| |||||||||||||| |||||||| ||||||| |    
T  22695048 caattatcaaacaaaataacattacatatcaacataaaataattttttacatttgggacgggtttgggtatgggttcggggtgggtacctctatacccgt 22694949  T
Q  169 taaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||  |||| |||||| || |||||| || |||  ||||||| |||||||||||    
T  22694948 tagtcgtcccatacccgtattttgagatcggg-gaaacccatacccataccca 22694897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 12834654 - 12834569
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||||||||||||  ||||||||||||||  ||| ||||| |||| |  ||||||||||||||  |||||||| |||||||||||    
T  12834654 gtatgggttcggggtaggtacctatatacctgttacccgtcccatatccatgttttgaaattggagaaaacccatacccataccca 12834569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 30996477 - 30996690
Alignment:
Q  9 ttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttat-aacacatcaattattaaacaaaataac---gcatatcaacaca 104  Q
    ||||||||| || ||||||||||| |||||||||||||||    ||  |||||||| ||||   ||||||| ||||||||||||   ||||||||||  |    
T  30996477 ttgttagacggaatgatttatttgatcctttaaatatcaac---ggtagtttttattaacatgacaattatcaaacaaaataacatggcatatcaactta 30996573  T
Q  105 taataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaa 204  Q
     | ||||||| | ||||  |||||  |||| || || |||||||| |||||||||||||||| ||| | ||| |||||  ||||||| |||| ||  |||    
T  30996574 aagtaattttttacatttgggacgggtttgggtgtgtgttcggggtgggtacctatatacccgttacctgtcccatactcgtgttttaaaatcggagaaa 30996673  T
Q  205 acccaaacccataccca 221  Q
    ||||| || ||||||||    
T  30996674 acccatactcataccca 30996690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 1218630 - 1218811
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac--gcatatc 98  Q
    ||||| ||||||||||| || ||||||| ||| ||||||||||||||||   ||  |||||| |||||   ||||||| ||||||||||||   || |||    
T  1218630 tttaacatttgttagacggaatgatttagttgatcctttaaatatcaat---ggtagtttttttaacatgacaattatcaaacaaaataacatacaaatc 1218726  T
Q  99 aacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacc 183  Q
    |||| | | ||||||| | ||||  |||||  | || |||||||||||| | |||||||||||||||| ||| | ||| ||||||    
T  1218727 aacataaagtaattttttacatttgggacgggtatgggtatgggttcggagtgggtacctatatacccgttacctgtcccatacc 1218811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 27900487 - 27900404
Alignment:
Q  130 atttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacc 213  Q
    ||||| ||||||||||| |  |||||||||||| | ||||| ||||| ||||||  ||||||||||| ||||||||| ||||||    
T  27900487 atttgggtatgggttcgagatgggtacctatatccacattacccgtcccatacccatgttttgaaatcgggaaaaactcaaacc 27900404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 221
Target Start/End: Complemental strand, 5908835 - 5908683
Alignment:
Q  72 caattattaaacaaaataacg---catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccat 168  Q
    ||||||| ||||||||||||    |||||||||| | | ||||||| | ||||  |||||  |||| ||||||||| |||| | |||| ||||||||| |    
T  5908835 caattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggtttggggtgtgtacatatatacccgt 5908736  T
Q  169 taaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    || ||||| |||||| |||||| || || ||| ||||| || |||||||||||    
T  5908735 tacccgtcccatacccgtgtttcgagatcggggaaaactcatacccataccca 5908683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 12915477 - 12915567
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||| ||||| | |||||| | ||| ||||||| | ||| ||| ||||| || |||||| ||||||||||||||||||||||||    
T  12915477 tttgggtatggcttcggagtgggtacatgtatccccattacctgtcccatgcctgtattatgaaatcgggaaaaacccaaacccataccca 12915567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 28569106 - 28569016
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| |||||||||||| ||| ||| ||||| | |||| |  ||||||||| ||| |||| |||||| ||||||||    
T  28569106 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccgcattttgaaatcggggaaaatccaaactcataccca 28569016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 221
Target Start/End: Original strand, 10127060 - 10127168
Alignment:
Q  106 aataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaa 205  Q
    ||||||||| | ||||  |||||  |||| |||||||||||||| ||||||||||||||       ||||| |||||| ||||||||| || ||| ||||    
T  10127060 aataattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatac-------ccgtcccatacccgtgttttgagatcggggaaaa 10127152  T
Q  206 cccaaacccataccca 221  Q
    |||| |||||||||||    
T  10127153 cccatacccataccca 10127168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 12866631 - 12866546
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||||||||| || |||||||||||||||  ||| ||||| ||||||  ||||||||||| ||  ||||| || |||||||||||    
T  12866631 gtatgggttcgcggtgggtacctatatacctgttacccgtcccatacccatgttttgaaatcggagaaaactcatacccataccca 12866546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 15890216 - 15890288
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaaccca 209  Q
    |||||||||||||  |||||||||||||||| ||| ||||| |||||| |||||||||||| ||  ||||||||    
T  15890216 gtatgggttcgggt-gggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaaccca 15890288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 16311372 - 16311292
Alignment:
Q  137 tatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    ||||||||||||| |||||||||||| ||  ||| ||||||| |||  |||||||||||| || |||||| ||||| ||||    
T  16311372 tatgggttcggggtgggtacctatatccctgttatccgtctcgtactcgtgttttgaaatcggaaaaaactcaaactcata 16311292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 33728071 - 33728000
Alignment:
Q  146 ggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccata 217  Q
    |||| |||||||||||||||| ||| ||||| |||||| ||||||||| || ||| |||| ||| |||||||    
T  33728071 ggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaatccatacccata 33728000  T

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Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 2681220 - 2681310
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| || |||  |||| ||||||| || || | ||||||| ||||||||| ||| ||||||||||| ||| ||||    
T  2681220 tttgggtatgggttcggggtggatactcatatccccattacccatcccgtacctgtattttgaaatcggggaaaacccaaactcatgccca 2681310  T

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Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 13402081 - 13401999
Alignment:
Q  139 tgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||||||| | ||||||||| |||||| ||| ||||  |||||| ||||||  |||| ||||||||| || |||||||||||    
T  13402081 tgggttcggagtgggtacctaaatacccgttacccgttccatacccgtgtttgaaaatcgggaaaaactcatacccataccca 13401999  T

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Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 24207736 - 24207778
Alignment:
Q  179 atacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||||||||||| ||| ||||| ||||||||||||||    
T  24207736 atacctgtgttttgaaatcggggaaaactcaaacccataccca 24207778  T

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Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 23045071 - 23044986
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||||||||||||| |||||| |||||  || ||| || || | |||| || ||||||||| ||| |||||| |||||||||||||    
T  23045071 gtatgggttcggggtgggtacatatatctccgttacccatcccgtacccgtattttgaaatcggggaaaacctaaacccataccca 23044986  T

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Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 29246031 - 29245946
Alignment:
Q  136 gtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    ||||||||| |||| ||||||||||||||   |||  |||| |||||| |||||||||||| ||  ||||| || |||||||||||    
T  29246031 gtatgggtttggggtgggtacctatatacatgttattcgtcccatacccgtgttttgaaatcggagaaaactcatacccataccca 29245946  T

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Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3564943 - 3564895
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaat 49  Q
    ||||| ||||||||||| || ||||||| ||| ||||||||||||||||    
T  3564943 tttaacatttgttagacggaatgatttagttgatcctttaaatatcaat 3564895  T

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Target: scaffold0007 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 197541 - 197329
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcatat 97  Q
    |||||||||||||||||||||||||||| |||||||||||||||||   |||||  ||||||||||||    |||||| ||||||||||||   ||||||    
T  197541 tttaatatttgttagaccgattgatttagttgctcctttaaatatc---aatggtagtttttataacaaggtaattatcaaacaaaataacatggcatat 197445  T
Q  98 caacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaatt 197  Q
    ||||| | | ||||||||||||||| |||||  |||| |||| | |||||   |||||||||||| ||  |||   |||||||| | ||||||||||||     
T  197444 caacataaagtaattttctgcattcgggacgggtttgggtatagattcggtttgggtacctatatgcctgttacttgtctcatatccgtgttttgaaata 197345  T
Q  198 gggaaaaacccaaacc 213  Q
    ||||||||| ||||||    
T  197344 gggaaaaactcaaacc 197329  T

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Target: scaffold0005 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 211349 - 211458
Alignment:
Q  112 tttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaa 211  Q
    ||||| ||||||||  || |||| |||||||||||||| |||||| ||||| ||  ||| ||||||| |||| || ||||||||| ||  ||||||||||    
T  211349 tttctacattcaggtagagtttgggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaa 211448  T
Q  212 cccataccca 221  Q
    ||||||||||    
T  211449 cccataccca 211458  T

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Target: scaffold0135 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 36030 - 36242
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgc--tcctttaaatatcaataatggctgtttttataacacatcaattattaaacaaaataac---gcat 95  Q
    ||||| |||||||||||||||||||||| ||||  |||||||||||||   |||||  |||||||||||||  || |||| ||||||||||||    |||    
T  36030 tttaacatttgttagaccgattgatttagttgctttcctttaaatatc---aatggtagtttttataacacgacagttatcaaacaaaataacatgacat 36126  T
Q  96 atcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaa 195  Q
    || |    ||  ||||||||||||||| |||||  ||||  |||| ||| |||  || ||||||||||| | ||| |||||  ||||| ||||| | ||     
T  36127 atta----atggtaattttctgcattcgggacgggtttggttatgagtttgggatggatacctatatactcgttatccgtcctatacccgtgttataaat 36222  T
Q  196 ttgggaaaaacccaaaccca 215  Q
    ||||||||||||||||||||    
T  36223 ttgggaaaaacccaaaccca 36242  T

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Target: scaffold0013 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 128205 - 128118
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccatac 218  Q
    |||| |||||||||||||| |||||| ||||| ||||||| ||||| | |||| || || ||||||||| |||||||||||| |||||    
T  128205 tttgggtatgggttcggggtgggtacatatatccccattacccgtcccgtacccgtattatgaaattggaaaaaacccaaactcatac 128118  T

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Target: scaffold0014 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14359 - 14311
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaat 49  Q
    ||||| |||||||||||||||||||||| ||| ||||||||||||||||    
T  14359 tttaacatttgttagaccgattgatttaattgttcctttaaatatcaat 14311  T

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Target: scaffold0097 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33457 - 33505
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaat 49  Q
    |||||||||||||| ||||| ||||||| ||||| ||||||||||||||    
T  33457 tttaatatttgttacaccgactgatttaattgcttctttaaatatcaat 33505  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6280 - 6328
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaat 49  Q
    ||||| |||||||||| ||||||||||| |||||||||||||| |||||    
T  6280 tttaacatttgttagatcgattgatttagttgctcctttaaatttcaat 6328  T

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Target: scaffold0519 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 204
Target Start/End: Original strand, 10240 - 10374
Alignment:
Q  72 caattattaaacaaaataacg--catatcaacacataataattttctgcattcaggacgaatttgtgtatgggttcggggagggtacctatatacccatt 169  Q
    ||||||| ||||||||||||   |||||||||||| | ||||||| | ||||  |||||  | || |||||||||||  | |||||||||||||||  ||    
T  10240 caattatcaaacaaaataacatacatatcaacacaaagtaattttttacatttgggacgggtatgggtatgggttcgtagtgggtacctatatacctgtt 10339  T
Q  170 aaccgtctcatacctgtgttttgaaattgggaaaa 204  Q
    | ||||| |||||| |||||| ||||  |||||||    
T  10340 atccgtcccatacccgtgtttggaaagcgggaaaa 10374  T

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Target: scaffold0184 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 2973 - 3063
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaacccataccca 221  Q
    |||| |||||||||||||| |||||| ||||| ||  ||| |||||   |||| || ||||||||| ||| ||||||||||| ||||||||    
T  2973 tttgagtatgggttcggggtgggtacatatatcccagttatccgtcctgtacccgtattttgaaatcggggaaaacccaaactcataccca 3063  T

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Target: scaffold0198 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 212
Target Start/End: Complemental strand, 20823 - 20742
Alignment:
Q  131 tttgtgtatgggttcggggagggtacctatatacccattaaccgtctcatacctgtgttttgaaattgggaaaaacccaaac 212  Q
    |||| ||||||||||| || || ||  ||||| ||||||| |||||||||||  | |||||||||| |||||||| ||||||    
T  20823 tttgagtatgggttcgaggtggatatttatatccccattacccgtctcatactcgagttttgaaatcgggaaaaatccaaac 20742  T

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Target: scaffold0189 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4130 - 4178
Alignment:
Q  1 tttaatatttgttagaccgattgatttatttgctcctttaaatatcaat 49  Q
    ||||| ||||||||||  || ||||||| ||||||||||||||||||||    
T  4130 tttaacatttgttagatggaatgatttagttgctcctttaaatatcaat 4178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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