View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13042_high_21 (Length: 245)

Name: NF13042_high_21
Description: NF13042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13042_high_21
NF13042_high_21
[»] chr7 (46 HSPs)
chr7 (41-224)||(34546373-34546554)
chr7 (9-174)||(29993514-29993677)
chr7 (7-174)||(4628562-4628727)
chr7 (5-172)||(24798426-24798590)
chr7 (4-147)||(30810679-30810819)
chr7 (12-169)||(28587911-28588065)
chr7 (5-171)||(47839492-47839655)
chr7 (5-150)||(42044316-42044458)
chr7 (5-145)||(8754608-8754745)
chr7 (5-172)||(12218459-12218624)
chr7 (5-171)||(5239284-5239448)
chr7 (5-152)||(34606280-34606424)
chr7 (5-170)||(24438477-24438640)
chr7 (5-172)||(18485959-18486124)
chr7 (12-144)||(47083082-47083211)
chr7 (6-172)||(18117142-18117305)
chr7 (5-109)||(23363190-23363294)
chr7 (10-108)||(525103-525201)
chr7 (6-108)||(7689224-7689326)
chr7 (5-172)||(34333282-34333446)
chr7 (5-140)||(45045801-45045933)
chr7 (13-140)||(11686353-11686479)
chr7 (7-178)||(5729338-5729507)
chr7 (44-171)||(27456175-27456299)
chr7 (9-140)||(43594063-43594191)
chr7 (8-140)||(13064902-13065032)
chr7 (7-147)||(47657004-47657139)
chr7 (5-147)||(1737004-1737142)
chr7 (9-109)||(37674131-37674231)
chr7 (7-103)||(33636517-33636613)
chr7 (8-140)||(46716669-46716798)
chr7 (26-106)||(13556474-13556553)
chr7 (34-109)||(22739882-22739958)
chr7 (6-144)||(28262058-28262188)
chr7 (44-171)||(37631604-37631729)
chr7 (35-170)||(18469993-18470126)
chr7 (5-84)||(23357733-23357812)
chr7 (35-93)||(47118042-47118100)
chr7 (57-145)||(4100599-4100684)
chr7 (14-140)||(29835735-29835859)
chr7 (7-151)||(3021911-3022044)
chr7 (37-109)||(36437436-36437507)
chr7 (28-144)||(18220717-18220829)
chr7 (21-144)||(18220479-18220597)
chr7 (28-109)||(20116949-20117029)
chr7 (37-109)||(4087682-4087752)
[»] chr5 (27 HSPs)
chr5 (5-170)||(34650856-34651018)
chr5 (5-173)||(13661805-13661971)
chr5 (6-170)||(6283562-6283724)
chr5 (5-173)||(35132519-35132684)
chr5 (4-170)||(11957989-11958153)
chr5 (3-171)||(40564425-40564589)
chr5 (5-108)||(10956012-10956114)
chr5 (5-170)||(21547417-21547579)
chr5 (4-131)||(12506336-12506460)
chr5 (8-109)||(20175286-20175387)
chr5 (13-170)||(35504271-35504426)
chr5 (5-172)||(8787337-8787502)
chr5 (5-172)||(10054376-10054540)
chr5 (41-172)||(19647717-19647846)
chr5 (36-147)||(13470175-13470283)
chr5 (15-132)||(9721640-9721754)
chr5 (5-133)||(11846110-11846235)
chr5 (61-172)||(4837256-4837364)
chr5 (41-170)||(10069969-10070095)
chr5 (9-147)||(40057331-40057466)
chr5 (20-140)||(39066973-39067091)
chr5 (10-173)||(31909629-31909784)
chr5 (13-109)||(4268621-4268716)
chr5 (20-172)||(39069379-39069526)
chr5 (60-139)||(2619635-2619711)
chr5 (9-139)||(19436865-19436990)
chr5 (4-92)||(31467797-31467884)
[»] chr1 (56 HSPs)
chr1 (5-173)||(12072085-12072251)
chr1 (5-170)||(24178486-24178649)
chr1 (8-181)||(47009982-47010153)
chr1 (4-173)||(51065770-51065937)
chr1 (13-145)||(3784744-3784873)
chr1 (5-172)||(15227737-15227902)
chr1 (5-172)||(42770013-42770178)
chr1 (8-171)||(48071482-48071642)
chr1 (10-140)||(3097690-3097817)
chr1 (5-174)||(18043158-18043325)
chr1 (8-170)||(5694321-5694481)
chr1 (13-171)||(19031846-19032002)
chr1 (4-171)||(45431278-45431442)
chr1 (25-179)||(17333325-17333476)
chr1 (6-171)||(29657770-29657933)
chr1 (4-147)||(41730329-41730472)
chr1 (5-172)||(14350301-14350465)
chr1 (5-152)||(38162869-38163013)
chr1 (8-146)||(9266754-9266889)
chr1 (3-171)||(13961211-13961376)
chr1 (10-138)||(6770370-6770495)
chr1 (8-140)||(30294407-30294536)
chr1 (9-109)||(36446352-36446452)
chr1 (9-172)||(29683193-29683355)
chr1 (20-140)||(38335200-38335317)
chr1 (41-171)||(29210412-29210540)
chr1 (5-168)||(38701960-38702117)
chr1 (7-173)||(51368810-51368974)
chr1 (4-138)||(35985643-35985774)
chr1 (8-107)||(12306978-12307077)
chr1 (4-140)||(45449266-45449399)
chr1 (4-109)||(50128194-50128299)
chr1 (9-172)||(43286720-43286881)
chr1 (4-109)||(52431640-52431745)
chr1 (52-174)||(30657604-30657724)
chr1 (5-169)||(30217763-30217924)
chr1 (5-139)||(47532694-47532824)
chr1 (9-140)||(8472941-8473069)
chr1 (7-167)||(48383136-48383294)
chr1 (8-140)||(23473490-23473619)
chr1 (13-172)||(52749600-52749757)
chr1 (59-173)||(15282591-15282702)
chr1 (34-109)||(37315320-37315394)
chr1 (45-138)||(39497340-39497430)
chr1 (4-73)||(19010709-19010778)
chr1 (9-108)||(35700679-35700776)
chr1 (28-106)||(3838824-3838901)
chr1 (35-109)||(37503273-37503346)
chr1 (61-109)||(26228252-26228300)
chr1 (39-89)||(14881036-14881086)
chr1 (72-109)||(19011057-19011094)
chr1 (34-92)||(16590268-16590325)
chr1 (66-106)||(39912363-39912403)
chr1 (67-102)||(28481906-28481941)
chr1 (94-169)||(19011108-19011180)
chr1 (37-109)||(49867489-49867560)
[»] chr8 (47 HSPs)
chr8 (5-169)||(16888567-16888728)
chr8 (6-172)||(27988523-27988687)
chr8 (6-172)||(28045825-28045989)
chr8 (5-172)||(9063075-9063239)
chr8 (5-172)||(33357152-33357317)
chr8 (9-180)||(29444167-29444336)
chr8 (4-171)||(3930255-3930419)
chr8 (6-140)||(11112670-11112801)
chr8 (6-172)||(16785085-16785248)
chr8 (5-170)||(30675596-30675758)
chr8 (5-147)||(34228706-34228845)
chr8 (5-173)||(168463-168629)
chr8 (4-145)||(42035003-42035141)
chr8 (9-169)||(21595848-21596005)
chr8 (9-171)||(12203854-12204013)
chr8 (9-171)||(12448282-12448441)
chr8 (5-139)||(36730476-36730607)
chr8 (4-172)||(4537766-4537932)
chr8 (6-173)||(13643009-13643173)
chr8 (6-173)||(13743434-13743598)
chr8 (7-147)||(16890505-16890642)
chr8 (26-146)||(40831302-40831419)
chr8 (10-172)||(4648193-4648352)
chr8 (8-168)||(20831579-20831737)
chr8 (13-170)||(37373206-37373360)
chr8 (5-140)||(2805283-2805415)
chr8 (8-138)||(7304544-7304671)
chr8 (12-171)||(43119216-43119373)
chr8 (9-147)||(28626792-28626927)
chr8 (9-140)||(9537851-9537979)
chr8 (22-140)||(10870383-10870498)
chr8 (5-170)||(16394084-16394247)
chr8 (8-140)||(32113939-32114069)
chr8 (12-147)||(9253932-9254063)
chr8 (20-139)||(17467635-17467751)
chr8 (5-105)||(39406905-39407005)
chr8 (28-106)||(42433590-42433667)
chr8 (41-132)||(34192814-34192902)
chr8 (22-105)||(22451847-22451929)
chr8 (63-139)||(9278244-9278317)
chr8 (9-109)||(29235294-29235394)
chr8 (10-96)||(24843307-24843393)
chr8 (35-107)||(22956766-22956838)
chr8 (63-147)||(10618042-10618123)
chr8 (36-109)||(30933376-30933448)
chr8 (28-96)||(36057897-36057967)
chr8 (91-170)||(12652630-12652707)
[»] chr4 (53 HSPs)
chr4 (9-170)||(54897308-54897467)
chr4 (10-174)||(789558-789720)
chr4 (6-172)||(43944505-43944669)
chr4 (5-171)||(4268845-4269009)
chr4 (14-169)||(19503137-19503289)
chr4 (5-174)||(29591185-29591352)
chr4 (4-171)||(4089141-4089306)
chr4 (5-172)||(16536046-16536211)
chr4 (6-132)||(36395138-36395261)
chr4 (9-147)||(54655903-54656038)
chr4 (15-147)||(32202514-32202642)
chr4 (35-173)||(15186240-15186376)
chr4 (13-106)||(31680494-31680587)
chr4 (6-172)||(43202407-43202571)
chr4 (14-140)||(4220226-4220348)
chr4 (5-147)||(32217069-32217207)
chr4 (6-132)||(50619125-50619248)
chr4 (15-170)||(3783534-3783687)
chr4 (15-109)||(30387167-30387261)
chr4 (25-179)||(7768929-7769081)
chr4 (9-140)||(12356275-12356403)
chr4 (13-171)||(18067910-18068066)
chr4 (9-132)||(46148978-46149098)
chr4 (12-174)||(47231902-47232062)
chr4 (5-109)||(6164152-6164256)
chr4 (10-147)||(24679671-24679804)
chr4 (35-140)||(39843938-39844040)
chr4 (7-171)||(55882683-55882843)
chr4 (5-133)||(30154186-30154311)
chr4 (5-172)||(33108696-33108860)
chr4 (8-147)||(54945805-54945940)
chr4 (12-147)||(42898774-42898908)
chr4 (41-147)||(54054572-54054675)
chr4 (38-170)||(28755621-28755750)
chr4 (12-172)||(37987934-37988091)
chr4 (7-139)||(53655903-53656032)
chr4 (5-108)||(16820912-16821015)
chr4 (6-109)||(41265518-41265620)
chr4 (13-173)||(52533816-52533974)
chr4 (5-104)||(39877270-39877371)
chr4 (41-108)||(46688264-46688331)
chr4 (12-106)||(53268782-53268875)
chr4 (7-106)||(31517227-31517327)
chr4 (26-109)||(49915218-49915301)
chr4 (5-103)||(50603292-50603391)
chr4 (9-172)||(5091638-5091798)
chr4 (41-140)||(42815140-42815237)
chr4 (9-141)||(52697082-52697210)
chr4 (12-93)||(8133782-8133862)
chr4 (72-171)||(50167590-50167685)
chr4 (9-89)||(53003983-53004063)
chr4 (117-173)||(8133731-8133787)
chr4 (114-170)||(39877556-39877612)
[»] chr2 (42 HSPs)
chr2 (5-170)||(31438646-31438809)
chr2 (7-139)||(26387089-26387218)
chr2 (6-172)||(34442556-34442719)
chr2 (5-167)||(3668136-3668295)
chr2 (5-147)||(20552955-20553094)
chr2 (5-170)||(44587902-44588065)
chr2 (8-171)||(22887749-22887910)
chr2 (5-172)||(27856419-27856584)
chr2 (5-172)||(30486208-30486373)
chr2 (5-167)||(4381798-4381958)
chr2 (5-174)||(561541-561708)
chr2 (5-139)||(5093562-5093693)
chr2 (27-170)||(43637165-43637305)
chr2 (5-147)||(6580213-6580352)
chr2 (6-109)||(1859221-1859324)
chr2 (5-150)||(8969430-8969572)
chr2 (8-172)||(31390010-31390172)
chr2 (8-140)||(22567633-22567762)
chr2 (5-147)||(22068343-22068481)
chr2 (9-147)||(32860126-32860260)
chr2 (9-106)||(25782860-25782957)
chr2 (9-109)||(4022506-4022606)
chr2 (12-172)||(38590904-38591062)
chr2 (7-147)||(35851776-35851913)
chr2 (9-140)||(2898102-2898230)
chr2 (6-103)||(13574053-13574150)
chr2 (5-171)||(32360892-32361056)
chr2 (28-147)||(38296201-38296317)
chr2 (6-147)||(27584762-27584900)
chr2 (41-171)||(26891722-26891850)
chr2 (20-138)||(11021260-11021375)
chr2 (15-145)||(5881243-5881374)
chr2 (8-147)||(28600991-28601126)
chr2 (3-104)||(29102304-29102405)
chr2 (34-109)||(15079011-15079085)
chr2 (25-132)||(25772149-25772254)
chr2 (9-109)||(39531883-39531981)
chr2 (10-106)||(15146694-15146789)
chr2 (14-106)||(34123057-34123148)
chr2 (28-106)||(10820546-10820622)
chr2 (171-228)||(5310546-5310603)
chr2 (6-99)||(44331841-44331934)
[»] chr6 (37 HSPs)
chr6 (5-168)||(2350654-2350815)
chr6 (5-170)||(392096-392259)
chr6 (4-173)||(3515763-3515930)
chr6 (5-147)||(26467147-26467286)
chr6 (9-172)||(1391205-1391365)
chr6 (5-174)||(18276635-18276804)
chr6 (5-171)||(29451138-29451301)
chr6 (5-173)||(32929531-32929697)
chr6 (5-172)||(4215693-4215858)
chr6 (5-172)||(23402136-23402301)
chr6 (8-139)||(12145143-12145271)
chr6 (12-140)||(2580983-2581108)
chr6 (14-172)||(7851191-7851347)
chr6 (5-140)||(32985216-32985348)
chr6 (9-139)||(34851876-34852003)
chr6 (35-170)||(21878400-21878533)
chr6 (5-140)||(35043921-35044052)
chr6 (4-173)||(12525716-12525883)
chr6 (25-170)||(23629619-23629761)
chr6 (41-172)||(20897946-20898075)
chr6 (6-170)||(29978233-29978394)
chr6 (13-171)||(27433491-27433647)
chr6 (5-146)||(11115120-11115256)
chr6 (6-139)||(13416983-13417116)
chr6 (6-140)||(25165437-25165568)
chr6 (41-150)||(34477609-34477715)
chr6 (9-173)||(3026036-3026196)
chr6 (57-172)||(34396602-34396715)
chr6 (25-140)||(28225252-28225363)
chr6 (13-129)||(961051-961164)
chr6 (6-150)||(1840271-1840412)
chr6 (6-132)||(5323439-5323562)
chr6 (35-171)||(31280320-31280454)
chr6 (4-146)||(9661011-9661150)
chr6 (69-147)||(13529479-13529554)
chr6 (6-99)||(22021733-22021826)
chr6 (28-100)||(24227434-24227506)
[»] scaffold0264 (1 HSPs)
scaffold0264 (3-172)||(22959-23126)
[»] chr3 (50 HSPs)
chr3 (7-147)||(49529291-49529431)
chr3 (5-173)||(52520678-52520844)
chr3 (5-171)||(272219-272383)
chr3 (5-171)||(49893330-49893494)
chr3 (5-139)||(858621-858752)
chr3 (9-147)||(42964276-42964411)
chr3 (5-170)||(43786871-43787034)
chr3 (5-174)||(46352630-46352797)
chr3 (5-147)||(48725295-48725434)
chr3 (5-170)||(10617307-10617469)
chr3 (6-170)||(2505350-2505511)
chr3 (4-170)||(39074419-39074582)
chr3 (6-145)||(41553964-41554100)
chr3 (5-139)||(38852246-38852380)
chr3 (5-172)||(40362603-40362768)
chr3 (13-170)||(4168183-4168338)
chr3 (5-171)||(41304004-41304166)
chr3 (5-106)||(6842681-6842782)
chr3 (5-175)||(18014667-18014835)
chr3 (8-138)||(42548128-42548255)
chr3 (35-146)||(2119456-2119563)
chr3 (5-140)||(2938063-2938195)
chr3 (6-152)||(52246601-52246745)
chr3 (9-170)||(20923992-20924151)
chr3 (5-109)||(33140944-33141048)
chr3 (5-147)||(53489847-53489986)
chr3 (10-108)||(50395591-50395688)
chr3 (26-149)||(22248908-22249028)
chr3 (10-139)||(13159929-13160055)
chr3 (8-140)||(28139340-28139469)
chr3 (5-145)||(43269762-43269899)
chr3 (5-140)||(7468442-7468573)
chr3 (9-109)||(50359213-50359313)
chr3 (10-109)||(50298973-50299072)
chr3 (35-147)||(29241661-29241770)
chr3 (4-172)||(11308233-11308398)
chr3 (1-109)||(41993639-41993746)
chr3 (26-109)||(31514850-31514932)
chr3 (20-106)||(24488428-24488514)
chr3 (9-93)||(52552549-52552632)
chr3 (41-106)||(2362893-2362958)
chr3 (69-107)||(6842604-6842642)
chr3 (83-172)||(52718166-52718252)
chr3 (59-138)||(53054834-53054913)
chr3 (171-229)||(8152250-8152308)
chr3 (87-147)||(2391631-2391688)
chr3 (87-147)||(2393392-2393449)
chr3 (28-109)||(21010056-21010133)
chr3 (114-170)||(2362801-2362858)
chr3 (73-106)||(6842641-6842674)
[»] scaffold0190 (1 HSPs)
scaffold0190 (5-170)||(14896-15059)
[»] scaffold0524 (1 HSPs)
scaffold0524 (6-139)||(857-987)
[»] scaffold0021 (1 HSPs)
scaffold0021 (4-172)||(116202-116368)
[»] scaffold0425 (1 HSPs)
scaffold0425 (7-107)||(10771-10871)
[»] scaffold0188 (1 HSPs)
scaffold0188 (5-147)||(6133-6272)
[»] scaffold1266 (1 HSPs)
scaffold1266 (10-171)||(292-450)
[»] scaffold0113 (1 HSPs)
scaffold0113 (9-145)||(40945-41078)
[»] scaffold0045 (2 HSPs)
scaffold0045 (8-152)||(50567-50708)
scaffold0045 (52-161)||(53416-53522)
[»] scaffold1152 (1 HSPs)
scaffold1152 (14-145)||(704-832)
[»] scaffold0003 (1 HSPs)
scaffold0003 (13-171)||(53716-53872)
[»] scaffold0674 (1 HSPs)
scaffold0674 (41-150)||(7956-8062)
[»] scaffold0549 (1 HSPs)
scaffold0549 (41-150)||(7309-7415)
[»] scaffold0038 (1 HSPs)
scaffold0038 (25-140)||(25750-25861)
[»] scaffold0002 (1 HSPs)
scaffold0002 (10-139)||(146933-147059)
[»] scaffold0014 (1 HSPs)
scaffold0014 (5-172)||(68313-68478)
[»] scaffold0050 (2 HSPs)
scaffold0050 (7-149)||(69248-69386)
scaffold0050 (9-106)||(33709-33805)
[»] scaffold0325 (1 HSPs)
scaffold0325 (4-174)||(17493-17658)
[»] scaffold0263 (1 HSPs)
scaffold0263 (9-103)||(19612-19706)
[»] scaffold0206 (1 HSPs)
scaffold0206 (41-171)||(11029-11155)
[»] scaffold0034 (1 HSPs)
scaffold0034 (13-172)||(95616-95772)
[»] scaffold0007 (1 HSPs)
scaffold0007 (13-103)||(233918-234008)
[»] scaffold0015 (1 HSPs)
scaffold0015 (35-103)||(74526-74594)
[»] scaffold0533 (1 HSPs)
scaffold0533 (71-109)||(5098-5136)


Alignment Details
Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 41 - 224
Target Start/End: Original strand, 34546373 - 34546554
Alignment:
Q  41 taccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaacc 140  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||| ||||||    
T  34546373 taccataaaagtaaactgtttttgactttactataaattaattacacaatttcaatgcattaactactat---ataatttcctttttcatatccttaacc 34546469  T
Q  141 ggtgcc-cgggagaatcggttagcatttcccttttgaaaataacctgaaataatttctcatgattaccatgatcaatctttcaac 224  Q
    ||| || |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34546470 ggtacctcgggggcatcggttagcatttcccttttgaaaataacctgaaataatttctcatgattaccatgatcaatctttcaac 34546554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 29993514 - 29993677
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29993514 cactggttaagcataccataaaagggaattattaccataaaaggaaattgattttgactttattataaattaattacacaatttcaatgcattaactact 29993613  T
Q  109 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctttt 174  Q
    |    |||||||||||||||||||| |||||||||| |||||| | | | |||||||||||||||||    
T  29993614 a---tataatttcctttttcatatccttaaccggtgccccgggggcacccgttagcatttccctttt 29993677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 4628727 - 4628562
Alignment:
Q  7 ggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    |||||||||||| |||| ||||||||  ||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||| ||||||||    
T  4628727 ggcactggttaagcataccataaaagggaattattaccataaaagtaaactgtttctgactttattataaattaattaaacaatttcaatgtattaacta 4628628  T
Q  107 ctactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctttt 174  Q
    |||    |||||||||||||||||||| |||||||||| ||| || | |||||||||||||||||||||    
T  4628627 cta---tataatttcctttttcatatccttaaccggtgccccaggggcatcggttagcatttccctttt 4628562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 24798426 - 24798590
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| ||||  |||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24798426 ggggcactggttaagcatactataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaac 24798525  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccctt 172  Q
    |||||    |||||||||||||||||||| | |||  ||||||||| | | |||||||||||||||||    
T  24798526 tacta---tataatttcctttttcatatcctcaacaagtgcccgggggcaccggttagcatttccctt 24798590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 30810819 - 30810679
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    ||||||| ||||||| |||| |||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30810819 tggggcattggttaaacataccataaaagaaaattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaa 30810720  T
Q  104 ctactactccataatttcctttttcatatcattaaccggtgccc 147  Q
    ||||||    |||||||||||||||||||| |||||| ||||||    
T  30810719 ctacta---tataatttcctttttcatatccttaaccagtgccc 30810679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 169
Target Start/End: Complemental strand, 28588065 - 28587911
Alignment:
Q  12 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactact 111  Q
    ||||||| |||| ||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||      
T  28588065 tggttaaacataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattgactacta-- 28587968  T
Q  112 ccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttcc 169  Q
      |||||||||||||||||||| |||||| ||| ||||| | | ||||||||||||||    
T  28587967 -tataatttcctttttcatatccttaaccagtgtccgggggcaccggttagcatttcc 28587911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 47839655 - 47839492
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||||||||| ||||| ||||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  47839655 ggggcactggttattcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgtattaac 47839556  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccct 171  Q
    || ||    |||| ||||||||||||||| |||||| || ||| ||   | ||||||||||||||||    
T  47839555 tatta---tataaattcctttttcatatccttaaccagtaccccgggacaccggttagcatttccct 47839492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 42044316 - 42044458
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||  ||||||    
T  42044316 ggggcactggttaaacataccataaaagggaattattaccataaaagaaaactgtttttgacattattataaattaattacacaatttcaatctattaac 42044415  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccggg 150  Q
    |||||    |||||||| ||||||||| | ||||||||||||||||    
T  42044416 tacta---tataatttcttttttcatacctttaaccggtgcccggg 42044458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 8754608 - 8754745
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||| ||| ||||| |||| |||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8754608 ggggtactagttaagcataccataaaaggaaattattaccataaaacaaaactgtttttgactttattataaattaattacacaatttcaatgcattaac 8754707  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgc 145  Q
    |||||    |||||||| ||||||||||| |||||| ||||    
T  8754708 tacta---tataatttcatttttcatatccttaaccagtgc 8754745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 12218459 - 12218624
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||| | ||||| | ||||||||||||||||||||||||||||||||||||||    
T  12218459 ggggcactggttaaacataccataaaagagaattattaccataaaaggaaactattttttattttattataaattaattacacaatttcaatgcattaac 12218558  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 172  Q
    |||||    |||||||||||||||||||  ||| || ||| |||||| | | |||||||||||||||||    
T  12218559 tacta---tataatttcctttttcatatacttatccagtgccccgggggcaccggttagcatttccctt 12218624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 5239448 - 5239284
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||  ||||| |||| ||||||||  ||||||||||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  5239448 ggggcacaagttaagcataccataaaagggaattattaccataaaaagaaactgtttttgacattattataaattaattacacaatttcaatgcattaac 5239349  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttccct 171  Q
    |||||    |||||||||||||||||| |||||||| |||| ||||  | | ||||||||||||||||    
T  5239348 tacta---tataatttcctttttcataccattaaccagtgctccggaggcaccggttagcatttccct 5239284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 34606424 - 34606280
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| |||||| |||| ||||||||  ||||||||||||||||| ||| || |||||||||||||||||||||||| |||||||||||||||||||     
T  34606424 ggggcacgggttaagcataccataaaaggtaattattaccataaaaggaaactgcttttgactttattataaattaatttcacaatttcaatgcattaat 34606325  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccgggag 152  Q
    |||||    |||||||||||||||||||| |||||| |||||| ||||    
T  34606324 tacta---tataatttcctttttcatatccttaaccagtgccccggag 34606280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 170
Target Start/End: Complemental strand, 24438640 - 24438477
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  24438640 ggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacataatttcaatgcattaac 24438541  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 170  Q
    |||||    ||| |||||||||||||| | |||||  ||| |||||| | | |||||||||||||||    
T  24438540 tacta---tatagtttcctttttcatacccttaactagtgccccgggggcaccggttagcatttccc 24438477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 18486124 - 18485959
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| |||||| |||| |||||||  |||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||| ||||||     
T  18486124 ggggcacgggttaagcataccataaaatgaaattattaccataaaaggaaactgtttttaactttattataaattaattacacaatttcaatacattaat 18486025  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 172  Q
    |||||    |||||||||||||  ||||| |||||| ||| |||||| | | |||||||||||||||||    
T  18486024 tacta---tataatttccttttcaatatccttaaccagtgccccgggggcaccggttagcatttccctt 18485959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 47083211 - 47083082
Alignment:
Q  12 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactact 111  Q
    ||||||| |||||||||||||  ||||||||||||||||| ||| ||||||| |||||||||| ||||||||||||||||||||| ||||||||||||      
T  47083211 tggttaaacatatcataaaagggaattattaccataaaaggaaactgtttttaactttattatcaattaattacacaatttcaatacattaactacta-- 47083114  T
Q  112 ccataatttcctttttcatatcattaaccggtg 144  Q
      |||||||| ||||||||||| ||||||||||    
T  47083113 -tataatttcttttttcatatccttaaccggtg 47083082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 172
Target Start/End: Complemental strand, 18117305 - 18117142
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||||||||||| |||| |||||||  |||||||||| ||||||  ||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18117305 gggcactggttaagcataccataaaatgaaattattactataaaaaaaaactgtttttgactttattataaattaattacacaatttcaatacattaact 18117206  T
Q  106 actactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccctt 172  Q
    ||||    |||||||||| ||||||||  |||||   || || |||| |||||||||||||| ||||    
T  18117205 acta---tataatttcctctttcatatacttaacaaatgtcccggagcatcggttagcattttcctt 18117142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 23363190 - 23363294
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  || |||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23363190 ggggcactggttaaacataccataaaagagaaatattaccataaaaggaaactgtttttaactttattataaattaattacacaatttcaatgcattaac 23363289  T
Q  105 tacta 109  Q
    |||||    
T  23363290 tacta 23363294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 525103 - 525201
Alignment:
Q  10 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    ||||||||| |||||||||||||  ||||||||||||||||| ||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  525103 actggttaaacatatcataaaagagaattattaccataaaaggaaactgtttttgattttattataaattaattatacaatttcaatgcattaactact 525201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 7689224 - 7689326
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    |||||||||||||  ||| ||||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  7689224 gggcactggttaagtataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaatt 7689323  T
Q  106 act 108  Q
    |||    
T  7689324 act 7689326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 34333446 - 34333282
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| |||||| |||| |||||||   ||||||||||||||||| ||| |||||| ||| ||||||||||||||||||||||||||||||||||||     
T  34333446 ggggcacgggttaaacataccataaaaaggaattattaccataaaaggaaactgtttt-gacattattataaattaattacacaatttcaatgcattaat 34333348  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 172  Q
    |||||    |||||||||||||||||| | |||||| ||| |||||| | | |||||||||||||||||    
T  34333347 tacta---tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctt 34333282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 45045933 - 45045801
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  |||||||| |||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||     
T  45045933 ggggcactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaat 45045834  T
Q  105 tactactccataatttcctttttcatatcattaacc 140  Q
    |||||    |||||||| ||||||||| | ||||||    
T  45045833 tacta---tataatttcatttttcatacccttaacc 45045801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 11686353 - 11686479
Alignment:
Q  13 ggttaatcatatcataaaagtaaattattaccataaaagtaaat--tgtttttgactttattataaattaattacacaatttcaatgcattaactactac 110  Q
    |||||| |||||||||||||  ||||||||||||||||  |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  11686353 ggttaagcatatcataaaagagaattattaccataaaaaaaaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactacta- 11686451  T
Q  111 tccataatttcctttttcatatcattaacc 140  Q
       |||||||||||||| ||||| ||||||    
T  11686452 --tataatttccttttttatatccttaacc 11686479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 178
Target Start/End: Complemental strand, 5729507 - 5729338
Alignment:
Q  7 ggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    |||||||||||| |||  ||||||||  ||||||||| ||||||| ||||| |||||||||||||||| |||||||||||  |||||||| |||||||||    
T  5729507 ggcactggttaagcatgccataaaagagaattattactataaaagaaaattatttttgactttattatcaattaattacattatttcaatacattaacta 5729408  T
Q  107 ctactccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttcccttttgaaa 178  Q
     ||    |||||||||||||||||||| |||||| |||| ||||||  | |||||| |||||||||| |||||    
T  5729407 tta---tataatttcctttttcatatccttaaccagtgctccgggaacaccggttaacatttcccttatgaaa 5729338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 27456175 - 27456299
Alignment:
Q  44 cataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaaccggt 143  Q
    |||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||| |||| |||||| |||||| ||    
T  27456175 cataaaaggaaactgcttttgactttattataaattaattacacaatttcaatgcattaactacta---tataatttctttttccatatccttaaccagt 27456271  T
Q  144 gcccgggagaatcggttagcatttccct 171  Q
    ||||||| | | | ||||||||||||||    
T  27456272 gcccgggggcaccagttagcatttccct 27456299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 43594063 - 43594191
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||| ||||||||  |||||||| ||||| || ||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  43594063 cactggttaagcataccataaaagagaattattatcataagaggaaactgtttttgactttattataaattaattatacaatttcaatgcattaactatt 43594162  T
Q  109 actccataatttcctttttcatatcattaacc 140  Q
    |    |||||||||||||| ||||| ||||||    
T  43594163 a---tataatttccttttttatatccttaacc 43594191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 13064902 - 13065032
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttt-tgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    ||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||| |||||| |||||| ||    
T  13064902 gcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttttgactttattataaattaattacacaaattcaatacattaaata 13065001  T
Q  107 ctactccataatttcctttttcatatcattaacc 140  Q
     ||    |||||||||||||||||||| ||||||    
T  13065002 tta---tataatttcctttttcatatccttaacc 13065032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 147
Target Start/End: Complemental strand, 47657139 - 47657004
Alignment:
Q  7 ggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    ||||||| |||| |||| ||||||||  ||||||||||||||||  ||| || |||| ||||||||||||||||||||||||||||||||||||||| ||    
T  47657139 ggcactgattaagcataccataaaagggaattattaccataaaa--aaactgcttttaactttattataaattaattacacaatttcaatgcattaatta 47657042  T
Q  107 ctactccataatttcctttttcatatcattaaccggtgccc 147  Q
    |||    ||||||| |||||||||||| |||||| ||||||    
T  47657041 cta---tataattttctttttcatatccttaaccagtgccc 47657004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 1737142 - 1737004
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||| | |||||||| |||||| | ||| ||||||| |||||||||| |||||||||||| ||||||||||||||||    
T  1737142 ggggcactggttaagcataccataaaa-tgaattattatcataaatggaaaatgtttttaactttattatcaattaattacactatttcaatgcattaac 1737044  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgccc 147  Q
    || ||    |||||||| ||||||||||| |||||| ||||||    
T  1737043 tatta---tataatttcatttttcatatccttaaccagtgccc 1737004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 37674131 - 37674231
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||| |||||||  ||| |  || |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37674131 cactggttaagcataccataaaaaaaaaattatatcataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactact 37674230  T
Q  109 a 109  Q
    |    
T  37674231 a 37674231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 33636613 - 33636517
Alignment:
Q  7 ggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    |||||||||||| |||| |||||||   |||||||||||||||| |||| | ||||| ||||||||||||||||||||||||||||||||| |||||    
T  33636613 ggcactggttaagcataccataaaatagaattattaccataaaaataaactattttttactttattataaattaattacacaatttcaatgaattaa 33636517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 46716798 - 46716669
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    |||| |||||| |||| ||||||||  |||||||| |||||||| ||| | |||||||||||||||||||||||||||| ||||||| |||||||| ||     
T  46716798 gcaccggttaaacataccataaaagggaattattatcataaaaggaaaatatttttgactttattataaattaattacataatttcagtgcattaagtat 46716699  T
Q  108 tactccataatttcctttttcatatcattaacc 140  Q
    ||    |||||||||||||| ||||| ||||||    
T  46716698 ta---tataatttccttttttatatctttaacc 46716669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 13556553 - 13556474
Alignment:
Q  26 ataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    ||||||| |||||||||||||||||  | |||||| |||||||| ||||||||||||||||||||||||||||||| ||||    
T  13556553 ataaaaggaaattattaccataaaaagatattgttattgacttt-ttataaattaattacacaatttcaatgcattgacta 13556474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 22739958 - 22739882
Alignment:
Q  34 aaattattaccataaaagtaaattgtttttgactttatt-ataaattaattacacaatttcaatgcattaactacta 109  Q
    |||||||||||||||||| ||| ||||||| | ||| || |||||||||||||||||||||||||||||||||||||    
T  22739958 aaattattaccataaaagaaaactgtttttaattttttttataaattaattacacaatttcaatgcattaactacta 22739882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 144
Target Start/End: Complemental strand, 28262188 - 28262058
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||| ||||||| |||| |||||||   ||||||||| ||||||| ||| ||||||||| |||||||| ||||||||||| ||||||||     |||||    
T  28262188 gggcattggttaagcataccataaaaaagaattattactataaaaggaaactgtttttgattttattatcaattaattacataatttcaa-----taact 28262094  T
Q  106 actactccataatttcctttttcatatcattaaccggtg 144  Q
    ||||    |||||||||||||||||||| ||||||||||    
T  28262093 acta---tataatttcctttttcatatccttaaccggtg 28262058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 37631604 - 37631729
Alignment:
Q  44 cataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaaccggt 143  Q
    |||||||| ||| ||||||||| |||||||||||||||||||| ||||| |||||||||| || ||    |||||||||||||| ||||| |||||| ||    
T  37631604 cataaaaggaaactgtttttgattttattataaattaattacataattttaatgcattaattatta---tataatttccttttttatatccttaacccgt 37631700  T
Q  144 g-cccgggagaatcggttagcatttccct 171  Q
    | ||||| || | |||||| |||||||||    
T  37631701 gccccggaagcaccggttaacatttccct 37631729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 170
Target Start/End: Original strand, 18469993 - 18470126
Alignment:
Q  35 aattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatca 134  Q
    ||||||||||||||||   || ||||||||||||| | ||||||||||||||||||||||||| ||||||| |||    ||||||||||||||  |||      
T  18469993 aattattaccataaaatgtaactgtttttgacttt-tcataaattaattacacaatttcaatgtattaactgcta---tataatttcctttttagtatgc 18470088  T
Q  135 ttaaccggtg--cccgggagaatcggttagcatttccc 170  Q
    ||||||||||  |||||| | | |||||||||||||||    
T  18470089 ttaaccggtgcccccgggggcaccggttagcatttccc 18470126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 23357733 - 23357812
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaatta 84  Q
    |||||||||||||| ||||||||| |||  |||||||| |||||| | ||| ||||||||||||| ||||||||||||||    
T  23357733 ggggcactggttaagcatatcatagaagagaattattatcataaatggaaactgtttttgacttttttataaattaatta 23357812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 47118042 - 47118100
Alignment:
Q  35 aattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttc 93  Q
    ||||||||||||||||| ||| || | ||||||||||||||||||||||||||||||||    
T  47118042 aattattaccataaaaggaaactgctcttgactttattataaattaattacacaatttc 47118100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 145
Target Start/End: Original strand, 4100599 - 4100684
Alignment:
Q  57 tgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaaccggtgc 145  Q
    ||||||||| || ||||||||||||| ||| ||||| ||| |||||| |||||    |||||||||||||||||||| |||||||||||    
T  4100599 tgtttttgatttgattataaattaataacataattttaatacattaattactat---ataatttcctttttcatatccttaaccggtgc 4100684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 29835735 - 29835859
Alignment:
Q  14 gttaatcatatcataaaagtaaattattaccataaaagtaaat-tgtttttgactttattataaattaattacacaatttcaatgcattaactactactc 112  Q
    ||||| |||| |||||||   ||||||||||||||||  |||  ||||||| ||||||||| ||||||||||| |||||| ||| ||||||||| ||       
T  29835735 gttaagcataccataaaatagaattattaccataaaaaaaaaactgtttttaactttattacaaattaattacgcaattttaatacattaactagta--- 29835831  T
Q  113 cataatttcctttttcatatcattaacc 140  Q
     |||| ||||||||||||||| ||||||    
T  29835832 tataacttcctttttcatatctttaacc 29835859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 151
Target Start/End: Complemental strand, 3022044 - 3021911
Alignment:
Q  7 ggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    |||| |||||||||||| || || || |||||||||||||||||||       || ||||||| |||||||||||||| |||||||||||| ||||||||    
T  3022044 ggcattggttaatcataccaaaagaggaaattattaccataaaagt-------ttatgacttt-ttataaattaattatacaatttcaatgtattaacta 3021953  T
Q  107 ctactccataatttcctttttcatatcattaaccggtgcccggga 151  Q
     ||    |||||||||||||| ||||  |||||| || |||||||    
T  3021952 gta---tataatttcctttttaatatgcttaacccgtacccggga 3021911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 36437507 - 36437436
Alignment:
Q  37 ttattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    |||||| |||||||| ||| | ||||||||||| |||||||||||||| |||||||||||| |||| ||||||    
T  36437507 ttattatcataaaagaaaactatttttgacttt-ttataaattaattaaacaatttcaatgaattacctacta 36437436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 18220717 - 18220829
Alignment:
Q  28 aaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttccttttt 127  Q
    ||||| || ||||||||||||||| ||| | |||||| | || ||||||||||||||||||||||| || |||||| |||||    ||||||||||||||    
T  18220717 aaaaggaatttattaccataaaagaaaactatttttgccatt-ttataaattaattacacaatttctatacattaattacta---tataatttccttttt 18220812  T
Q  128 catatcattaaccggtg 144  Q
      | | |||||||||||    
T  18220813 attttaattaaccggtg 18220829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 18220479 - 18220597
Alignment:
Q  21 atatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataattt 120  Q
    |||||| ||||| || ||||||  ||||||| ||||||||||||||  | |||||||||||||||||||||| ||| |||||| |||||    |||||||    
T  18220479 atatcaaaaaaggaatttattattataaaag-aaattgtttttgacaat-ttataaattaattacacaattttaatacattaattacta---tataattt 18220573  T
Q  121 cctttttcatatcattaaccggtg 144  Q
     ||||||  |||| ||||||||||    
T  18220574 tctttttagtatccttaaccggtg 18220597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 20117029 - 20116949
Alignment:
Q  28 aaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    ||||| ||||||||| |||||||| ||| |||||||| | || ||| ||||| | ||||||||||||||||||||| |||||    
T  20117029 aaaaggaaattattatcataaaagaaaactgtttttggcctt-ttaaaaatttactacacaatttcaatgcattaattacta 20116949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 4087752 - 4087682
Alignment:
Q  37 ttattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    ||||||||||||||| ||| |||||||||   | |||||||||||| |||| |||||||||||||||||||||    
T  4087752 ttattaccataaaag-aaactgtttttgaaact-ttataaattaatcacactatttcaatgcattaactacta 4087682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 3e-47; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 34650856 - 34651018
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  34650856 ggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaac 34650955  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccc 170  Q
    |||||    |||||||||||||||||| | |||||| ||||||||| | | |||||||||||||||    
T  34650956 tacta---tataatttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttccc 34651018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 173
Target Start/End: Complemental strand, 13661971 - 13661805
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| |||||| |||| ||||||||  ||||||||||||||||| ||| ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  13661971 ggggcacgggttaagcataccataaaagagaattattaccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaac 13661872  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttcccttt 173  Q
    |||||    |||||||||||||||||||| |||||| |||| ||||| | | ||||||||||||||||||    
T  13661871 tacta---tataatttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttcccttt 13661805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 170
Target Start/End: Complemental strand, 6283724 - 6283562
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||||||||||| |||| ||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6283724 gggcactggttaagcataccataaaaatgaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatgcattaatt 6283625  T
Q  106 actactccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccc 170  Q
    | ||    ||||||| |||||||||||| |||||  |||||| ||| | | |||||||||||||||    
T  6283624 atta---tataattttctttttcatatctttaactagtgccccggaggcaccggttagcatttccc 6283562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 173
Target Start/End: Complemental strand, 35132684 - 35132519
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||| ||||||| |||| ||||||||  ||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35132684 ggggcattggttaagcataccataaaagagaattattaccataaa-gaaaactgtttttgactttattataaattaattacacaatttcaatgtattaac 35132586  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttt 173  Q
    |||||    |||||||||||||||||||| |||||| ||| |||||| | | ||||||||||||||||||    
T  35132585 tacta---tataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttcccttt 35132519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 4 - 170
Target Start/End: Original strand, 11957989 - 11958153
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    ||||||||||||||| |||  ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| ||||||||    
T  11957989 tggggcactggttaagcatgccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcattgcattaa 11958088  T
Q  104 ctactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 170  Q
    ||||||    |||||||||||||| ||||| |||||| ||| |||||| | | |||||||||||||||    
T  11958089 ctacta---tataatttccttttttatatctttaacctgtgccccgggggcaccggttagcatttccc 11958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 171
Target Start/End: Original strand, 40564425 - 40564589
Alignment:
Q  3 ttggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcatta 102  Q
    |||||| | ||||||| |||| ||||||||  ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40564425 ttggggtattggttaagcataccataaaagagaattattaccataaaaaaaaattgtttttgactttattataaattaattacacaatttcaatgcatta 40564524  T
Q  103 actactactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccct 171  Q
    |||||||    |||||||||||||||| ||| |||| || || || |||  | ||||||||||||||||    
T  40564525 actacta---tataatttcctttttcaaatccttaatcgatgtcccgga-caccggttagcatttccct 40564589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 10956114 - 10956012
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  10956114 ggggtactggttaagcatatcataaaaggaaattattaccataaaaggaaattgtttttgactttgttataaattaatta-acaatttcaatgcattaac 10956016  T
Q  105 tact 108  Q
    ||||    
T  10956015 tact 10956012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 21547417 - 21547579
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||| ||||||||| |||| |||||| |  |||||||| | |||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21547417 ggggtactggttaagcataccataaatgagaattattaacttaaaatgaaactgtttttgactttattataaattaattacacaatttcaatgcattaac 21547516  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccc 170  Q
    |||||    |||||||||||||| ||||| ||||||| ||||||||   | |||||||||||||||    
T  21547517 tacta---tataatttccttttttatatccttaaccgatgcccggggacaccggttagcatttccc 21547579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 12506460 - 12506336
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    ||||||||||||||| |||  ||||||||  ||||||||| ||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  12506460 tggggcactggttaagcattccataaaagagaattattactataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaa 12506361  T
Q  104 ctactactccataatttcctttttcata 131  Q
    ||||||    ||||||||||||||||||    
T  12506360 ctacta---tataatttcctttttcata 12506336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 20175387 - 20175286
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    ||||| ||||| ||||| |||||||  |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20175387 gcactagttaagcatattataaaagggaattattatcataaaagaaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 20175288  T
Q  108 ta 109  Q
    ||    
T  20175287 ta 20175286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 35504271 - 35504426
Alignment:
Q  13 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactc 112  Q
    |||||| |||| ||||||||  ||||||| |||||||||  || |||||||||| ||||||||||||||||||||||||||||||||||||||||||       
T  35504271 ggttaagcataccataaaagggaattattgccataaaagggaactgtttttgacattattataaattaattacacaatttcaatgcattaactacta--- 35504367  T
Q  113 cataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 170  Q
     |||||||||||||||||| | |||||| ||| |||||| | | |||||||||||||||    
T  35504368 tataatttcctttttcatacccttaaccagtgtcccgggggcaccggttagcatttccc 35504426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 8787502 - 8787337
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| |||||| |||| |||||||   |||||||| |||||||| ||| |||||||||  |||||||||||||||||||||||||||||||||||||    
T  8787502 ggggcacaggttaagcataccataaaatggaattattatcataaaaggaaactgtttttgatattattataaattaattacacaatttcaatgcattaac 8787403  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccgggaga-atcggttagcatttccctt 172  Q
    |||||    |||||||| ||||||||| | ||||||  ||||| || || | |||||||||||||||||    
T  8787402 tacta---tataatttcatttttcatacccttaaccaatgccccggggacaccggttagcatttccctt 8787337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 10054376 - 10054540
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| |||||| |||| |||||||   ||||||||||||||||| ||| |||||| ||| ||||||||||||||||||||||||||||||||||||     
T  10054376 ggggcacgggttaaacataccataaaaaggaattattaccataaaaggaaactgtttt-gacattattataaattaattacacaatttcaatgcattaat 10054474  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 172  Q
    || ||    |||||||||||||||||| | |||||| ||| |||||| | | |||||||||||||||||    
T  10054475 tatta---tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctt 10054540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 19647717 - 19647846
Alignment:
Q  41 taccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaacc 140  Q
    ||||||||||| ||| ||||| |||||||||||| ||||||||| ||||||||||||||||||||||||    |||||||||||||||||||| ||||||    
T  19647717 taccataaaaggaaactgtttatgactttattatcaattaattatacaatttcaatgcattaactacta---tataatttcctttttcatatccttaacc 19647813  T
Q  141 ggtgcccgggaga-atcggttagcatttccctt 172  Q
     |||||| ||||| | |||||||||||| ||||    
T  19647814 agtgccccggagataccggttagcattttcctt 19647846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 147
Target Start/End: Complemental strand, 13470283 - 13470175
Alignment:
Q  36 attattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcat 135  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||    || ||||||||||||||||| |    
T  13470283 attattaccataaaaggaaactgtttttgactttattataaattaattatacaatttcaatgcattgactacta---tattatttcctttttcatatcct 13470187  T
Q  136 taaccggtgccc 147  Q
    ||||| ||||||    
T  13470186 taaccagtgccc 13470175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 9721640 - 9721754
Alignment:
Q  15 ttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactcca 114  Q
    |||| |||| ||||||||  |||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||    |    
T  9721640 ttaaacataccataaaagggaattattatcataaaagaaaactgtttttgactttattataaattaattaaacaatttcaatgcattaattacta---ta 9721736  T
Q  115 taatttcctttttcatat 132  Q
    ||||||||||||||||||    
T  9721737 taatttcctttttcatat 9721754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 11846235 - 11846110
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| ||||  |||||||  | ||||||||||||||| ||| |  |||||||||||||||||||||||||||||||||||||| ||||||    
T  11846235 ggggcactggttaagcatactataaaagggatttattaccataaaaggaaactacttttgactttattataaattaattacacaatttcaatgtattaac 11846136  T
Q  105 tactactccataatttcctttttcatatc 133  Q
    |||||    |||||||||||||| |||||    
T  11846135 tacta---tataatttccttttttatatc 11846110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 61 - 172
Target Start/End: Complemental strand, 4837364 - 4837256
Alignment:
Q  61 tttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaaccggtgcccgggagaatcggtt 160  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    |||||||||||||||||||  ||||||||||||| || | | |||||    
T  4837364 tttgactttattataaattaattacacaatttcaatgcattaattacta---tataatttcctttttcatattcttaaccggtgccccggggcaccggtt 4837268  T
Q  161 agcatttccctt 172  Q
    | ||||||||||    
T  4837267 aacatttccctt 4837256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 10070095 - 10069969
Alignment:
Q  41 taccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaacc 140  Q
    ||||||||||  ||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||    |||||||||||||||||||| ||||||    
T  10070095 taccataaaaagaaactgtttttgactttattatca-ttaattacacaatttcaatgcattaactacta---tataatttcctttttcatatccttaacc 10070000  T
Q  141 ggtg-cccgggagaatcggttagcatttccc 170  Q
     ||| |||||| | | |||||||||||||||    
T  10069999 agtgccccgggggcaccggttagcatttccc 10069969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 40057466 - 40057331
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| || ||||||||||  || |||||| ||||||| ||| || |||||| |||||||||||||||||| || ||||||||||| ||||||||    
T  40057466 cactggttaaacacatcataaaagggaaatattactataaaagaaaactgcttttgattttattataaattaattatactatttcaatgcactaactact 40057367  T
Q  109 actccataatttcctttttcatatcattaaccggtgccc 147  Q
    |    |||||||||||||||||||| |||| ||||||||    
T  40057366 a---tataatttcctttttcatatccttaatcggtgccc 40057331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 39066973 - 39067091
Alignment:
Q  20 catatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatt 119  Q
    |||| ||||||||  ||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||  ||||||||  | |  ||||||    
T  39066973 cataacataaaagagaattattaccataaaaggatattgtttttgactttattataaattaattacataatttcaatatattaacta--attatataatt 39067070  T
Q  120 tcctttttcatatcattaacc 140  Q
    || ||||||||||| ||||||    
T  39067071 tcttttttcatatccttaacc 39067091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 31909784 - 31909629
Alignment:
Q  10 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    ||||||||| |||| |||||||| ||||||||| ||     | ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31909784 actggttaagcataccataaaagaaaattattatca-----ggaaactgtttttgactttattataaatcaattacacaatttcaatgcattaactacta 31909690  T
Q  110 ctccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttcccttt 173  Q
        ||||||||| |||| ||||| |||||| ||  ||||  | | |||||| |||||||||||    
T  31909689 ---tataatttcccttttaatatccttaaccagtatccggaggcaccggttaacatttcccttt 31909629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 4268716 - 4268621
Alignment:
Q  13 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    |||||| |||| || ||||| |||||||||||||||||| ||| ||||||| | ||| |||||||||||||||||||||| ||||||||||||||||    
T  4268716 ggttaagcataccaaaaaagaaaattattaccataaaaggaaactgttttttatttt-ttataaattaattacacaattttaatgcattaactacta 4268621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 172
Target Start/End: Complemental strand, 39069526 - 39069379
Alignment:
Q  20 catatcataaaagtaaattattaccataaaagtaaattgtttttgac-tttattataaattaattacacaatttcaatgcattaactactactccataat 118  Q
    |||||||||||||  ||||||||||||||||| ||||||||||| ||  ||||||||   |||||||||||||| ||||||||||||||||    |||||    
T  39069526 catatcataaaagagaattattaccataaaaggaaattgtttttcacaattattata---taattacacaattttaatgcattaactacta---tataat 39069433  T
Q  119 ttcctttttcatatcattaaccggtgccc-gggagaatcggttagcatttccctt 172  Q
    |||| |||||||| | |||||| |||||| || || | |||||||||||||||||    
T  39069432 ttcc-ttttcatacccttaaccagtgccctggaagcaccggttagcatttccctt 39069379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 2619635 - 2619711
Alignment:
Q  60 ttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaac 139  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||    ||||||| |||||||||||| |||||    
T  2619635 ttttaactttattataaattaattacacaatttcaatacattaactacta---aataattttctttttcatatccttaac 2619711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 19436865 - 19436990
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    ||||||| || |||| ||||||||  ||||||||||||||||  ||| | ||||| ||||||| |||||||||||| ||||||||||||| ||||| |||    
T  19436865 cactggtgaaacataccataaaagagaattattaccataaaaa-aaactatttttaactttat-ataaattaattatacaatttcaatgctttaaccact 19436962  T
Q  109 actccataatttcctttttcatatcattaac 139  Q
    |    |||||||||||||||||||| |||||    
T  19436963 a---tataatttcctttttcatatccttaac 19436990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 31467884 - 31467797
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaattt 92  Q
    ||||||||||||||| ||||  | ||||| ||||| |||||||||||| || || || |||||||  ||||| |||||||| |||||||    
T  31467884 tggggcactggttaagcatacaaaaaaaggaaattcttaccataaaaggaagtt-ttgttgacttatttatagattaattaaacaattt 31467797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 173
Target Start/End: Original strand, 12072085 - 12072251
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| |||||||   ||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  12072085 ggggcactggttaagcataccataaaaaggaattattaccataaaagaaaactgtttttgactttattatcaattaattacacaatttcaatgcattaac 12072184  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttt 173  Q
    |||||   ||||||||||||||||||||| |||||||||| |||||| | | |||||||||||| |||||    
T  12072185 tacta---cataatttcctttttcatatccttaaccggtgccccgggggcaccggttagcattttccttt 12072251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 24178486 - 24178649
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| |||||||  |||||||||||||||||| ||| || |||||||||||||||| ||||||||||||||||||||||||||||    
T  24178486 ggggcactggttaagcataccataaaatgaaattattaccataaaaggaaactgcttttgactttattatagattaattacacaatttcaatgcattaac 24178585  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 170  Q
    || ||    |||||||||||||||||||| |||||| ||| |||||| | |||||||||||||||||    
T  24178586 tatta---tataatttcctttttcatatccttaaccagtgccccgggggcatcggttagcatttccc 24178649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 47010153 - 47009982
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    ||||||||||| |||| ||||||||  ||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  47010153 gcactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttgaatttattataaattaattacacaatttcaatacattaactac 47010054  T
Q  108 tactccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttcccttttgaaaata 181  Q
    ||    |||||||||||||||||||| |||||| |||| ||||  | | || |||||||||||||||||||||||    
T  47010053 ta---tataatttcctttttcatatccttaaccagtgctccggatgcaccgattagcatttcccttttgaaaata 47009982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 51065770 - 51065937
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    ||||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  51065770 tggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatacattaa 51065869  T
Q  104 ctactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttt 173  Q
    ||||||    ||||||| |||||||||||| |||||| ||| ||||||   | ||||||||||||||||||    
T  51065870 ctacta---tataatttactttttcatatccttaaccagtgtcccggggacaccggttagcatttcccttt 51065937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 3784744 - 3784873
Alignment:
Q  13 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactc 112  Q
    |||||| |||| |||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||       
T  3784744 ggttaagcataccataaaaggaaattattaccataaaagaaaattgtttttgactttattatcaattaattacacaatttcaatgcattaactacta--- 3784840  T
Q  113 cataatttcctttttcatatcattaaccggtgc 145  Q
     |||||||||||||||||||| |||||| ||||    
T  3784841 tataatttcctttttcatatccttaaccagtgc 3784873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 15227902 - 15227737
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||     
T  15227902 ggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaat 15227803  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 172  Q
    |||||    |||||||||||||||||||| |||||| ||| ||| || | | |||||||||||||||||    
T  15227802 tacta---tataatttcctttttcatatccttaaccagtgcccccggggtaccggttagcatttccctt 15227737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 42770013 - 42770178
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| |||||||   ||||||||||||||||| ||| |||||||||  |||||||||||||||||||||||||||||||||||||    
T  42770013 ggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgatattattataaattaattacacaatttcaatgcattaac 42770112  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 172  Q
    |||||    |||||||||||||||||| |||||||| ||| |||||| | | |||||||||||||||||    
T  42770113 tacta---tataatttcctttttcataccattaaccagtgccccgggggcaccggttagcatttccctt 42770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 48071642 - 48071482
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    |||| |||||| ||||  |||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  48071642 gcaccggttaagcatactataaaagataattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactat 48071543  T
Q  108 tactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccct 171  Q
    ||    ||||||||||||| |||||| |||||| || ||| |||| ||||||||||||||||||    
T  48071542 ta---tataatttccttttacatatccttaaccagtaccccggagcatcggttagcatttccct 48071482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 3097817 - 3097690
Alignment:
Q  10 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    ||||||||| |||| |||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3097817 actggttaagcataccataaaaggaaattattaccataaaagaaaactgtttttgactttattataaattaattacataatttcaatgcattaactacta 3097718  T
Q  110 ctccataatttcctttttcatatcattaacc 140  Q
        |||||||||||||||||||| ||||||    
T  3097717 ---tataatttcctttttcatatccttaacc 3097690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 18043325 - 18043158
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| |||||||   ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  18043325 ggggcactggttaagcataccataaaatagaattattaccataaaagaaaactgtttttgacattattataaattaattacacaatttcaatgcattaac 18043226  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccctttt 174  Q
    |||||    |||||||||||||| ||| | |||||| |||||| ||| | | |||||||||||||||||||    
T  18043225 tacta---tataatttccttttttatacccttaaccagtgccccggaggcaccggttagcatttccctttt 18043158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 5694481 - 5694321
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    ||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5694481 gcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactac 5694382  T
Q  108 tactccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccc 170  Q
    ||    ||||||||| |||| ||||| |||||| |||||| ||| | | |||||||||||||||    
T  5694381 ta---tataatttccctttttatatccttaaccagtgccccggaggcaccggttagcatttccc 5694321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 19031846 - 19032002
Alignment:
Q  13 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactc 112  Q
    |||||| ||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||       
T  19031846 ggttaagcatatcataaaaggaaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgttttaactacta--- 19031942  T
Q  113 cataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 171  Q
     |||||||||||||||||||| |||||   || ||| |||| | ||||||||||||||||    
T  19031943 tataatttcctttttcatatccttaactaatgcccccggagcaccggttagcatttccct 19032002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 45431442 - 45431278
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    |||||||||||||||  ||||||||||||  ||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||| ||||||    
T  45431442 tggggcactggttaagtatatcataaaagagaattattaccataaaaggaaactatttttgactttattataaattaattacacaatttcaatacattaa 45431343  T
Q  104 ctactactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccct 171  Q
    ||||||    |||||||||||||||||||| |||| | |  || ||| | | ||||||||||||||||    
T  45431342 ctacta---tataatttcctttttcatatccttaatcaggccctgggggcaccggttagcatttccct 45431278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 179
Target Start/End: Original strand, 17333325 - 17333476
Alignment:
Q  25 cataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctt 124  Q
    ||||||||  || ||||| |||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    |||||||||||    
T  17333325 cataaaagggaagtattatcataaaaggaaactgtttttgactttattatgaattaattacacaatttcaatgcattaactacta---tataatttcctt 17333421  T
Q  125 tttcatatcattaaccggtgcccgggagaatcggttagcatttcccttttgaaaa 179  Q
    ||||||||| |||||| ||||||||| | | ||||||||||||||| ||| ||||    
T  17333422 tttcatatccttaaccagtgcccgggggcaccggttagcatttcccatttaaaaa 17333476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 171
Target Start/End: Complemental strand, 29657933 - 29657770
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||||||||||| |||| ||||||||  ||||||||||| ||||| ||| |||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  29657933 gggcactggttaagcataccataaaagggaattattaccaaaaaaggaaactgtttttgactttattatcaattaattatacaatttcaatgcattaact 29657834  T
Q  106 actactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 171  Q
    ||||    |||||||||||||| ||||| |||||| ||| |||||| | | ||||||||||||||||    
T  29657833 acta---tataatttccttttttatatccttaaccagtgccccgggggcaccggttagcatttccct 29657770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 41730472 - 41730329
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    ||||||||| ||||| |||| ||||||||  |||||||| |||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  41730472 tggggcacttgttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattaaacaatttcaatgcattaa 41730373  T
Q  104 ctactactccataatttcctttttcatatcattaaccggtgccc 147  Q
     |||||||  |||||||| ||||||||||  |||||| ||||||    
T  41730372 ttactactatataatttcttttttcatattcttaacccgtgccc 41730329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 14350301 - 14350465
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||| || | || ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  14350301 ggggcactggttaagcataccattaagggaa-ttattaccataaaaggaaattgtttttgacattattataaattaattacacaattttaatgcattaac 14350399  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttccctt 172  Q
    ||| |    |||||||||||||||||| | ||||||||||| ||||| | | |||||||||||||||||    
T  14350400 tacaat---ataatttcctttttcatacccttaaccggtgctccgggggcaccggttagcatttccctt 14350465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 38163013 - 38162869
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| |||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  38163013 ggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaac 38162914  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccgggag 152  Q
    |||||    ||||||| |||||||||| | |||||| |||||| ||||    
T  38162913 tacta---tataattttctttttcatacccttaaccagtgccccggag 38162869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 9266754 - 9266889
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    |||||||||||  ||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  9266754 gcactggttaagtataccataaaagcgaattattaccataaaaggaaactgtttttgactttattatgaattaattacacaatttcaatgcattaaatac 9266853  T
Q  108 tactccataatttcctttttcatatcattaaccggtgcc 146  Q
    ||    |||||||||||||||||||| |||||| |||||    
T  9266854 ta---tataatttcctttttcatatccttaaccagtgcc 9266889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 171
Target Start/End: Complemental strand, 13961376 - 13961211
Alignment:
Q  3 ttggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcatta 102  Q
    |||| ||||||||||| |||| |||||||| |||||||||||||||||  ||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  13961376 ttggagcactggttaagcataccataaaagaaaattattaccataaaatgaaactgtttttgactttattatcaattaattacacaatttcaatgcatta 13961277  T
Q  103 actactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 171  Q
    |||||||    |||||||  ||||| ||||| |||||| ||| |||||| | | ||||||||||||||||    
T  13961276 actacta---tataattt-tttttttatatccttaacccgtgccccgggggcaccggttagcatttccct 13961211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 138
Target Start/End: Complemental strand, 6770495 - 6770370
Alignment:
Q  10 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    ||||||||| |||||||||||||  |||||||| |||||||  ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6770495 actggttaagcatatcataaaagggaattattatcataaaatgaaactgtttttgactttattataaattaattacacaatttcaatacattaactacta 6770396  T
Q  110 ctccataatttcctttttcatatcattaa 138  Q
        |||||||||||||||||||| ||||    
T  6770395 ---tataatttcctttttcatatccttaa 6770370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 30294407 - 30294536
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    |||| |||||| |||| ||||||||  ||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30294407 gcacaggttaagcataccataaaagggaattattaccataaaaagaaactgtttttgacattattataaattaattacacaatttcaatgcattaactac 30294506  T
Q  108 tactccataatttcctttttcatatcattaacc 140  Q
    ||    |||||||||||||||||||| ||||||    
T  30294507 ta---tataatttcctttttcatatccttaacc 30294536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 36446352 - 36446452
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||| ||||||||  ||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36446352 cactggttaaacataccataaaagggaattattactataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactact 36446451  T
Q  109 a 109  Q
    |    
T  36446452 a 36446452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 29683355 - 29683193
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||| ||||||||| ||||||||| ||||||  ||| |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  29683355 cactggttaagcataccataaaagtgaattattactataaaatgaaactgtttttgactttattataaattaattatacgatttcaatgcattaactact 29683256  T
Q  109 actccataatttcc-tttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 172  Q
    |    ||||||||| ||||| ||||| |||||| ||| |||||| | | |||||||||||||||||    
T  29683255 a---tataatttcctttttttatatctttaaccagtgccccgggggcaccggttagcatttccctt 29683193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 38335317 - 38335200
Alignment:
Q  20 catatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatt 119  Q
    |||| ||||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||    ||||||    
T  38335317 cataccataaaagtgaattattatcataaaagaaaactgtttttgactttattataaattaattacacaattacaatgcattaattacta---tataatt 38335221  T
Q  120 tcctttttcatatcattaacc 140  Q
    |||||||||||||| ||||||    
T  38335220 tcctttttcatatctttaacc 38335200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 29210540 - 29210412
Alignment:
Q  41 taccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaacc 140  Q
    ||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||| | ||||||    
T  29210540 taccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactacta---tataatttcctttttcatacccttaacc 29210444  T
Q  141 ggtgcccggga-gaatcggttagcatttccct 171  Q
     |||||| ||| | | ||||||||||||||||    
T  29210443 agtgccccggaggcaccggttagcatttccct 29210412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 168
Target Start/End: Original strand, 38701960 - 38702117
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| |||||     ||||||||||||||||| ||| |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  38701960 ggggcactggttaagcataccataa----gaattattaccataaaagaaaactgtttttgacattattataaattaattacataatttcaatgcattaac 38702055  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttc 168  Q
    |||||    ||| |||||||||||||| | |||||| ||| |||||||| | |||||||||||||    
T  38702056 tacta---tatagtttcctttttcatacccttaaccagtgccccgggagcaccggttagcatttc 38702117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 173
Target Start/End: Original strand, 51368810 - 51368974
Alignment:
Q  7 ggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    |||||||||||| |||| |||||||   ||||||||| ||||||| ||| | |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  51368810 ggcactggttaagcataccataaaatggaattattactataaaaggaaactatttttgacattattataaattaactacacaatttcaatgcattaacta 51368909  T
Q  107 ctactccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttcccttt 173  Q
    |||    |||||||||||||||||| | |||||| || ||| ||| | | ||||||||||||||||||    
T  51368910 cta---tataatttcctttttcatacccttaaccagtaccctggaggtaccggttagcatttcccttt 51368974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 35985643 - 35985774
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    |||||||||||||||  |||  ||||| |  ||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  35985643 tggggcactggttaagtatactataaatgggaattattaccataaaaggaaactgtttttcactttattataaattaattacacaatttcaatgcattaa 35985742  T
Q  104 ctactactccataatttcctttttcatatcattaa 138  Q
    ||||||    |||||||||||||| ||||| ||||    
T  35985743 ctacta---tataatttccttttttatatccttaa 35985774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 12307077 - 12306978
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    ||||||||||| |||| ||||||||  ||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12307077 gcactggttaagcataccataaaagagaattattaccataaaaggaatctgtttttgactttattataaattaattacacaatttcaatgtattaactac 12306978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 45449266 - 45449399
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    ||||||||||||||| |||| ||||||||  ||||||||||||||||| ||| || ||||||||||||||||| |||||||||| |||| ||||||||||    
T  45449266 tggggcactggttaaacataccataaaaggcaattattaccataaaaggaaactgcttttgactttattataatttaattacactattttaatgcattaa 45449365  T
Q  104 ctactactccataatttcctttttcatatcattaacc 140  Q
    ||||||    ||||||| |||||| ||||| ||||||    
T  45449366 ctacta---tataattttcttttttatatctttaacc 45449399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 50128194 - 50128299
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    |||| |||||||||| |||| ||||||||  ||||||||||||||||  ||| || |||| |||||||||||||||||||||||||||||||||||||||    
T  50128194 tgggacactggttaagcataccataaaagagaattattaccataaaatgaaactgcttttaactttattataaattaattacacaatttcaatgcattaa 50128293  T
Q  104 ctacta 109  Q
    ||||||    
T  50128294 ctacta 50128299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 43286881 - 43286720
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||| ||||||||  ||||||||| ||||||| ||| | |||||||||||||||||||||||||||| ||||||||  ||||||||| |    
T  43286881 cactggttaagcataccataaaagagaattattactataaaaggaaactatttttgactttattataaattaattacataatttcaaaacattaactatt 43286782  T
Q  109 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 172  Q
    |    |||||||||||||||||||| |||||| ||| ||| ||   |||||||||||||| ||||    
T  43286781 a---tataatttcctttttcatatccttaaccagtgtcccagggacatcggttagcattttcctt 43286720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 52431745 - 52431640
Alignment:
Q  4 tggggcactggttaatcatatcataaaa-gtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcatta 102  Q
    ||||||||||||||| |||| || |||| | |||||||||||||||||| |||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  52431745 tggggcactggttaagcataccaaaaaaaggaaattattaccataaaagaaaattgcttttgacatt-ttataaattaattacacaatttcaatgcatta 52431647  T
Q  103 actacta 109  Q
    |||||||    
T  52431646 actacta 52431640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 174
Target Start/End: Complemental strand, 30657724 - 30657604
Alignment:
Q  52 taaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaaccggtg-cccggg 150  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    |||||||| ||||||||||  |||||  ||| ||||||    
T  30657724 taaactgtttttgactttattataaattaattacataatttcaatgcattaactacta---tataatttcttttttcatatgcttaactagtgccccggg 30657628  T
Q  151 agaatcggttagcatttccctttt 174  Q
    || | |||||||||||||||||||    
T  30657627 agcaccggttagcatttccctttt 30657604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 169
Target Start/End: Complemental strand, 30217924 - 30217763
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||||| |||| |||| |||||||  |||||||||||||||||| ||| | |||||||||||||||||||||||||| | ||||| |||||||||||    
T  30217924 ggggcactg-ttaagcataccataaaaagaaattattaccataaaagaaaactatttttgactttattataaattaattaaataatttaaatgcattaac 30217826  T
Q  105 tactactccataatttcc--tttttcatatcattaaccggtgcccgggagaatcggttagcatttcc 169  Q
    |||| |||  ||||| ||  ||||||||||| ||| || |||||| |||| ||||||||||||||||    
T  30217825 tact-ctc--taattccctttttttcatatccttagccagtgccc-ggagcatcggttagcatttcc 30217763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 47532694 - 47532824
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||| ||||||| |||| ||||||||  ||||||||  ||||||| ||||| ||||||||||||||||  ||||||||||||||||||||||||||||    
T  47532694 ggggcattggttaagcataccataaaagggaattattattataaaaggaaattatttttgactttattat-cattaattacacaatttcaatgcattaac 47532792  T
Q  105 tactactccataatttcctttttcatatcattaac 139  Q
    |||||    ||||||| |||||||||||| |||||    
T  47532793 tacta---tataattttctttttcatatccttaac 47532824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 8472941 - 8473069
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    ||||||||||  ||| ||||||||  ||||||||  ||||||  ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  8472941 cactggttaagtataccataaaagagaattattattataaaatgaaactgtttttgactttattataaattaattacacaattttaatgcattaactatt 8473040  T
Q  109 actccataatttcctttttcatatcattaacc 140  Q
    |    |||||||||||||| ||||| ||||||    
T  8473041 a---tataatttccttttttatatccttaacc 8473069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 167
Target Start/End: Original strand, 48383136 - 48383294
Alignment:
Q  7 ggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    |||| ||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| |||||||||||  |||||||| ||||||||     
T  48383136 ggcattggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacattatttcaatacattaactt 48383235  T
Q  107 ctactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcattt 167  Q
      |    ||||||| |||||||| ||| |||||| ||| |||||||| | ||||||||||||    
T  48383236 tca---tataattttctttttcacatccttaaccagtgccccgggagcaccggttagcattt 48383294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 23473490 - 23473619
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    |||| |||||| ||||| ||||||  |||||||||||||||||| ||| || |||  |||||||||||||||||||| ||||||||||| |||||||| |    
T  23473490 gcacaggttaagcatattataaaaagaaattattaccataaaaggaaactgctttaaactttattataaattaattatacaatttcaatacattaactgc 23473589  T
Q  108 tactccataatttcctttttcatatcattaacc 140  Q
    ||    ||||| |||||||||||||| ||||||    
T  23473590 ta---tataatctcctttttcatatccttaacc 23473619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 52749757 - 52749600
Alignment:
Q  13 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactc 112  Q
    |||||| |||| |||||||   ||||||||||||||||  ||||||||||| |||||||| |||||| | || ||||||||||| ||||||||| ||       
T  52749757 ggttaaacataccataaaaaggaattattaccataaaaaaaaattgtttttaactttattgtaaatttagtatacaatttcaatacattaactatta--- 52749661  T
Q  113 cataatttcctttttcatatcattaaccggtgcccgggaga-atcggttagcatttccctt 172  Q
     |||||||||||||||||||| ||||||  ||||| |  || |||||||||||||||||||    
T  52749660 tataatttcctttttcatatctttaaccaatgccccgcggatatcggttagcatttccctt 52749600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 173
Target Start/End: Original strand, 15282591 - 15282702
Alignment:
Q  59 tttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaaccggtgcccgggagaatcgg 158  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||    ||||||| |||||||||||| |||||| || ||  |||  ||| |    
T  15282591 tttttgactttattataaattaattacacaatttcaatatattaactacta---tataattttctttttcatatccttaaccagtacctcggaatatccg 15282687  T
Q  159 ttagcatttcccttt 173  Q
    |||||||||||||||    
T  15282688 ttagcatttcccttt 15282702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 37315320 - 37315394
Alignment:
Q  34 aaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    ||||||||| |||||||| ||| ||| ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  37315320 aaattattagcataaaagaaaactgtctttgacttt-ttataaattaattacataatttcaatgcattaactacta 37315394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 138
Target Start/End: Complemental strand, 39497430 - 39497340
Alignment:
Q  45 ataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaa 138  Q
    ||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||||||||||||||    ||||||| |||||||||||| ||||    
T  39497430 ataaaagaaaattatttttgactttattataaattaattatataattttaatgcattaactacta---tataattttctttttcatatccttaa 39497340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 19010709 - 19010778
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttatta 73  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||||| ||| | |||||||||||||||    
T  19010709 tggggcactggttaatcataccataaaagggaattattaccataaaaggaaactatttttgactttatta 19010778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 35700679 - 35700776
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    ||||||||||  |||||| ||||| || |||||| |||||||  || || ||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  35700679 cactggttaaggatatcaaaaaaggaagttattatcataaaaa-aatttttttttgacttt-ttataaattaattacacaatttcaatgtattaactact 35700776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 3838824 - 3838901
Alignment:
Q  28 aaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    ||||| |||||||| ||||||||  |||||| ||||||| || |||||||||||||||||||||| |||||||||||||    
T  3838824 aaaaggaaattattgccataaaaaaaaattgcttttgacatt-ttataaattaattacacaattttaatgcattaacta 3838901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 37503346 - 37503273
Alignment:
Q  35 aattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    |||| |||||||||||| ||| | ||||||| ||| ||||||||||||||||||||||||||| |||||||||||    
T  37503346 aattgttaccataaaaggaaaatatttttgatttt-ttataaattaattacacaatttcaatgtattaactacta 37503273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 26228300 - 26228252
Alignment:
Q  61 tttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  26228300 tttgattttattataaattaattacataatttcaatgcattaactacta 26228252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 14881036 - 14881086
Alignment:
Q  39 attaccataaaagtaaattgtttttgactttattataaattaattacacaa 89  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  14881036 attaccataaaaggaaactgtttttgactttattataaattaattatacaa 14881086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 19011057 - 19011094
Alignment:
Q  72 tataaattaattacacaatttcaatgcattaactacta 109  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19011057 tataaattaattacacaatttcaatgcattaactacta 19011094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 16590268 - 16590325
Alignment:
Q  34 aaattattaccataaaagtaaattgtttttgactttattataaattaattacacaattt 92  Q
    ||||||||| |||||||| ||||||||| |||| || ||||||||||||||||||||||    
T  16590268 aaattattatcataaaagaaaattgtttctgacatt-ttataaattaattacacaattt 16590325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 39912363 - 39912403
Alignment:
Q  66 ctttattataaattaattacacaatttcaatgcattaacta 106  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  39912363 cttttttataaattaatcacacaatttcaatgcattaacta 39912403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 102
Target Start/End: Complemental strand, 28481941 - 28481906
Alignment:
Q  67 tttattataaattaattacacaatttcaatgcatta 102  Q
    |||||||||||||||||||||||||| |||||||||    
T  28481941 tttattataaattaattacacaattttaatgcatta 28481906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 19011108 - 19011180
Alignment:
Q  94 aatgcattaactactactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttcc 169  Q
    ||||||||||||||||    |||||||||||||||||||| |||||| |||||| ||   | ||||||||||||||    
T  19011108 aatgcattaactactat---ataatttcctttttcatatccttaacccgtgccccgggacaccggttagcatttcc 19011180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 49867560 - 49867489
Alignment:
Q  37 ttattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    ||||||| ||||||  ||||| ||| ||||||| || ||||||||||||||||||||||  |||||| |||||    
T  49867560 ttattactataaaatgaaattttttctgacttt-ttgtaaattaattacacaatttcaaaacattaattacta 49867489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 16888567 - 16888728
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||| ||||||| |||| || |||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16888567 ggggcattggttaagcataccacaaaagagaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaac 16888666  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttcc 169  Q
    |||||    |||||||||||||||||||| |||||| ||||||||| | | ||||||||||||||    
T  16888667 tacta---tataatttcctttttcatatccttaacctgtgcccgggggcaccggttagcatttcc 16888728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 6 - 172
Target Start/End: Original strand, 27988523 - 27988687
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27988523 gggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaact 27988622  T
Q  106 actactccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccctt 172  Q
    | ||    |||||||||||||||||||| |||||| |||||| ||| | | |||||||||||||||||    
T  27988623 atta---tataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttccctt 27988687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 6 - 172
Target Start/End: Original strand, 28045825 - 28045989
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28045825 gggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaact 28045924  T
Q  106 actactccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccctt 172  Q
    | ||    |||||||||||||||||||| |||||| |||||| ||| | | |||||||||||||||||    
T  28045925 atta---tataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttccctt 28045989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 9063075 - 9063239
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| ||||||| |||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  9063075 ggggcactggttaagcatatcacaaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattgcacgatttcaatgcattaac 9063174  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttccctt 172  Q
    |||||    |||||||||||||||||||| |||||| |||| ||||||  | |||||||||||||||||    
T  9063175 tacta---tataatttcctttttcatatccttaaccagtgctccggga-caccggttagcatttccctt 9063239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 33357152 - 33357317
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||| ||||| |||| ||||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33357152 ggggcactagttaagcataccataaaagagaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaac 33357251  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttccctt 172  Q
    |||||    |||||||||||||||||||| |||||| |||| ||||| | | | |||||||||||||||    
T  33357252 tacta---tataatttcctttttcatatccttaaccagtgctccgggggcaccagttagcatttccctt 33357317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 29444167 - 29444336
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29444167 cactggttaaacataccataaaagggaattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcgttaactact 29444266  T
Q  109 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttttgaaaat 180  Q
    |    |||||||||||||||||||| |||| | ||| |||||||| | |||||| ||||| |||||| |||||    
T  29444267 a---tataatttcctttttcatatccttaatcagtgccccgggagcaccggttaacattttcctttttaaaat 29444336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 171
Target Start/End: Original strand, 3930255 - 3930419
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    ||||||||||||||| ||||||||||||| ||||||||| || ||||| ||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  3930255 tggggcactggttaagcatatcataaaaggaaattattatcaaaaaaggaaactgtttttgactttattatcaattaattacacaacttcaatgcattaa 3930354  T
Q  104 ctactactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccct 171  Q
    ||||||    |||||||||| |||||||| ||||||  ||||||||| | | || |||||||||||||    
T  3930355 ctacta---tataatttcctctttcatattattaactagtgcccgggggcaccgattagcatttccct 3930419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 11112801 - 11112670
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    |||||| |||||| |||| ||||||||| |||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11112801 gggcacaggttaagcataccataaaagtgaattattatcataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaact 11112702  T
Q  106 actactccataatttcctttttcatatcattaacc 140  Q
    ||||    |||||||||||||||||||| ||||||    
T  11112701 acta---tataatttcctttttcatatccttaacc 11112670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 172
Target Start/End: Complemental strand, 16785248 - 16785085
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    |||||| ||||||||||| ||||||||  ||||||||  ||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16785248 gggcacgggttaatcataccataaaagagaattattattataaaaggaaactgtttttgactttattataaattaattacacaatttcaatacattaact 16785149  T
Q  106 actactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccctt 172  Q
     |||    |||||||| ||||||||||| |||||| |||||| |||| | |||||||||||||||||    
T  16785148 gcta---tataatttcttttttcatatccttaaccagtgccctggagcaccggttagcatttccctt 16785085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 30675596 - 30675758
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| |||||||| || ||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  30675596 ggggcactggttaagcataccataaaaggaa-ttattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaac 30675694  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 170  Q
    |||||    |||||||||||||||||| | |||||| ||| |||||| | | |||||||||||||||    
T  30675695 tacta---tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 30675758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 34228845 - 34228706
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||     
T  34228845 ggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaat 34228746  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgccc 147  Q
    |||||    |||||||||||||||||||| |||||| ||||||    
T  34228745 tacta---tataatttcctttttcatatccttaaccagtgccc 34228706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 173
Target Start/End: Complemental strand, 168629 - 168463
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||| ||||||| |||| |||||||   ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  168629 ggggcattggttaagcataccataaaatggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaac 168530  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttcccttt 173  Q
    |||||    |||||||||||||||||| | |||||| |||||| ||| | | ||||||||||||||||||    
T  168529 tacta---tataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttcccttt 168463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 42035003 - 42035141
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    ||||||||  ||||| |||| ||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42035003 tggggcacgtgttaagcataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaa 42035102  T
Q  104 ctactactccataatttcctttttcatatcattaaccggtgc 145  Q
    ||||||    |||||||||||||||||||| |||||| ||||    
T  42035103 ctacta---tataatttcctttttcatatccttaaccagtgc 42035141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 21596005 - 21595848
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||| ||||||||  ||||| ||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  21596005 cactggttaagcataccataaaagggaattaataccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactcct 21595906  T
Q  109 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttcc 169  Q
    |    |||||||||||||||||| | |||||| ||||||||| | | ||||||||||||||    
T  21595905 a---tataatttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttcc 21595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 12204013 - 12203854
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||| | |||| ||||||||  |||||||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12204013 cactggttcagcataccataaaagggaattattatcataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 12203914  T
Q  109 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccct 171  Q
    |    |||||||| ||||||||| | ||||||||| |||||| | | ||||||||||||||||    
T  12203913 a---tataatttcttttttcatacccttaaccggtacccgggggcaccggttagcatttccct 12203854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 12448441 - 12448282
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||| | |||| ||||||||  |||||||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12448441 cactggttcagcataccataaaagggaattattatcataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 12448342  T
Q  109 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccct 171  Q
    |    |||||||| ||||||||| | ||||||||| |||||| | | ||||||||||||||||    
T  12448341 a---tataatttcttttttcatacccttaaccggtacccgggggcaccggttagcatttccct 12448282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 36730607 - 36730476
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| |||||| ||||  |||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36730607 ggggcacaggttaagcatactataaaagagaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaac 36730508  T
Q  105 tactactccataatttcctttttcatatcattaac 139  Q
    |||||    |||||||||||||||||||| |||||    
T  36730507 tacta---tataatttcctttttcatatccttaac 36730476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 172
Target Start/End: Original strand, 4537766 - 4537932
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    |||||||| |||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  4537766 tggggcacaggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacataatttcaatgcattaa 4537865  T
Q  104 ctactactccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccctt 172  Q
    ||||||    |||||||||| ||| ||||| |||||| |||||| ||| | | |||||||||||||||||    
T  4537866 ctacta---tataatttcctattttatatccttaaccagtgccccggaggcaccggttagcatttccctt 4537932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 6 - 173
Target Start/End: Complemental strand, 13643173 - 13643009
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||||||||||| |||| ||||||||  ||||||||||||||||| || || |||||||||||||||||||||||||||| ||||||||||||||||||    
T  13643173 gggcactggttaagcataccataaaagagaattattaccataaaaggaattt-tttttgactttattataaattaattacataatttcaatgcattaact 13643075  T
Q  106 actactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttt 173  Q
    ||||    ||||||||||||||| |||| |||||| ||| |||||| | | |||||||||||| |||||    
T  13643074 acta---tataatttcctttttcgtatccttaaccagtgccccgggggcaccggttagcattttccttt 13643009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 6 - 173
Target Start/End: Complemental strand, 13743598 - 13743434
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||||||||||| |||| ||||||||  ||||||||||||||||| || || |||||||||||||||||||||||||||| ||||||||||||||||||    
T  13743598 gggcactggttaagcataccataaaagagaattattaccataaaaggaattt-tttttgactttattataaattaattacataatttcaatgcattaact 13743500  T
Q  106 actactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttt 173  Q
    ||||    ||||||||||||||| |||| |||||| ||| |||||| | | |||||||||||| |||||    
T  13743499 acta---tataatttcctttttcgtatccttaaccagtgccccgggggcaccggttagcattttccttt 13743434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 16890505 - 16890642
Alignment:
Q  7 ggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    ||||| |||||| |||| |||||||   ||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16890505 ggcaccggttaagcataccataaaaaggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaacta 16890604  T
Q  107 ctactccataatttcctttttcatatcattaaccggtgccc 147  Q
    |||    |||||||||||||||||||| ||||| |||||||    
T  16890605 cta---tataatttcctttttcatatccttaactggtgccc 16890642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 26 - 146
Target Start/End: Complemental strand, 40831419 - 40831302
Alignment:
Q  26 ataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttccttt 125  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    ||||||| ||||    
T  40831419 ataaaagaaaattattaccataaaagaaaattgtttttgactttattataaattaattatacaatttcaatgcattaactacta---tataattttcttt 40831323  T
Q  126 ttcatatcattaaccggtgcc 146  Q
    |||||||| |||||| |||||    
T  40831322 ttcatatctttaaccagtgcc 40831302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 4648352 - 4648193
Alignment:
Q  10 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    ||||||||| |||||||||||||  |||||||||||| |||  ||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  4648352 actggttaagcatatcataaaagggaattattaccatcaaaagaaactgtttttgacattattataaattaattacacaatttcaatgtattaactacta 4648253  T
Q  110 ctccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccctt 172  Q
        |||||||||||||||||||| |||| | |||||| ||   | |||||||||||||||||    
T  4648252 ---tataatttcctttttcatatccttaatcagtgccccgggacaccggttagcatttccctt 4648193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 20831579 - 20831737
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    |||||| |||| |||| ||||||||  ||||||||||||||||| ||| || ||||||||||||||||||||||||| || |||||||||||||||||||    
T  20831579 gcactgattaagcataccataaaagagaattattaccataaaaggaaactgcttttgactttattataaattaattatactatttcaatgcattaactac 20831678  T
Q  108 tactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttc 168  Q
    ||    |||||||||||||||||||| |||||| ||| |||||| | | |||||||||||||    
T  20831679 ta---tataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttc 20831737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 37373360 - 37373206
Alignment:
Q  13 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactc 112  Q
    |||||| |||| ||| ||||  ||||||||||||||||| ||| |||||| ||||||||||| ||||||||||||||||||||||||||||||| ||       
T  37373360 ggttaagcataccatgaaagggaattattaccataaaagaaaactgttttcgactttattatcaattaattacacaatttcaatgcattaactatta--- 37373264  T
Q  113 cataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccc 170  Q
     |||||||||||||||||||| |||||| ||| ||||| | | |||||||||||||||    
T  37373263 tataatttcctttttcatatccttaaccagtgtccgggggcaccggttagcatttccc 37373206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 2805283 - 2805415
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||| || ||||||||||||||||  |||||||||||||||||||||||||||    
T  2805283 ggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgcttttgactttattataggttaattacacaatttcaatgcattaac 2805382  T
Q  105 tactactccataatttcctttttcatatcattaacc 140  Q
    || ||    |||||||||||||||||||| ||||||    
T  2805383 tatta---tataatttcctttttcatatccttaacc 2805415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 7304544 - 7304671
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    ||||||||||| |||| ||||||||  |||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7304544 gcactggttaagcataccataaaagagaattattttcataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactac 7304643  T
Q  108 tactccataatttcctttttcatatcattaa 138  Q
    ||    ||||||| |||||||||||| ||||    
T  7304644 ta---tataattttctttttcatatccttaa 7304671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 43119373 - 43119216
Alignment:
Q  12 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactact 111  Q
    ||||||| |||| ||||||||  |||||| |||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||      
T  43119373 tggttaagcataccataaaagagaattatcaccataaaagaaaactgtttttgactttattataaattaattatacaatttcaatgcattaactacta-- 43119276  T
Q  112 ccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 171  Q
      ||||||| |||||||||||| |||| | ||| |||| | | | ||||||||||||||||    
T  43119275 -tataattttctttttcatatctttaatcagtgccccgagggcaccggttagcatttccct 43119216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 28626927 - 28626792
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    ||||| |||| |||| ||||||||  |||||||| |||||||  ||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  28626927 cactgattaagcataccataaaagggaattattatcataaaaagaaactgtttttgactttattataaattaatcacacaatttcaatacattaactact 28626828  T
Q  109 actccataatttcctttttcatatcattaaccggtgccc 147  Q
    |    |||||||||||||||| ||| |||||||||||||    
T  28626827 a---tataatttcctttttcacatccttaaccggtgccc 28626792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 9537851 - 9537979
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||| |||||||| |||||||||| ||||||  ||| |  |||||| |||||||||||||||||||||||||| |||||||||||||||    
T  9537851 cactggttaagcataccataaaaggaaattattactataaaaagaaactccttttgaatttattataaattaattacacaattttaatgcattaactact 9537950  T
Q  109 actccataatttcctttttcatatcattaacc 140  Q
    |    |||||||||||||||||||| ||||||    
T  9537951 a---tataatttcctttttcatatccttaacc 9537979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 10870498 - 10870383
Alignment:
Q  22 tatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttc 121  Q
    |||||||||||  ||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| |||||||| ||    |||||||     
T  10870498 tatcataaaagggaattattaccataaaaggaaactgtttttgattttattataaattaattacacaatttcaatgtattaactatta---tataatttt 10870402  T
Q  122 ctttttcatatcattaacc 140  Q
    |||||| ||||||||||||    
T  10870401 cttttttatatcattaacc 10870383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 16394084 - 16394247
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||| ||||||| |||| ||||||||  |||||||| |||||||| ||| |||||||||||||||||| |||||||||||  ||||||||||||||||    
T  16394084 ggggcattggttaagcataccataaaagagaattattagcataaaaggaaactgtttttgactttattatcaattaattacattatttcaatgcattaac 16394183  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 170  Q
    || ||    ||||||| |||||||| ||| |||||| ||| |||||| | | |||||||||||||||    
T  16394184 tatta---tataattttctttttcacatccttaaccagtgccccgggggcaccggttagcatttccc 16394247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 32114069 - 32113939
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagt-aaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    ||||||||||| ||||  |||||||  |||||||| ||||||||  ||| ||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  32114069 gcactggttaaacatactataaaagggaattattatcataaaagggaaactgttttttactttattataaattaattaaacaatttcaatgcattaacta 32113970  T
Q  107 ctactccataatttcctttttcatatcattaacc 140  Q
    |||    |||||||||||||||||||| ||||||    
T  32113969 cta---tataatttcctttttcatatccttaacc 32113939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 9253932 - 9254063
Alignment:
Q  12 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactact 111  Q
    ||||||| |||| ||||||||  ||||||||| ||||||| ||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||      
T  9253932 tggttaagcataccataaaagagaattattactataaaaggaaactgtttttgactttattatca-ttaattacacaatttcaatgcattaactactat- 9254029  T
Q  112 ccataatttcctttttcatatcattaaccggtgccc 147  Q
      | |||||| ||||||||||| |||||| ||||||    
T  9254030 --aaaatttcatttttcatatccttaaccagtgccc 9254063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 17467751 - 17467635
Alignment:
Q  20 catatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatt 119  Q
    ||||| |||||| | ||||||||   |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||   | |||| |||||||    
T  17467751 catattataaaattgaattattatagtaaaaggaaattgtttttgattttattatcaattaattacacaatttcaatgcatta---attactgcataatt 17467655  T
Q  120 tcctttttcatatcattaac 139  Q
    ||||||||||||||||||||    
T  17467654 tcctttttcatatcattaac 17467635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 39407005 - 39406905
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||| ||||| |||| ||||||||  |||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| || ||||||||    
T  39407005 ggggcactagttaaacataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattacacaattttaacgcattaac 39406906  T
Q  105 t 105  Q
    |    
T  39406905 t 39406905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 42433590 - 42433667
Alignment:
Q  28 aaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    ||||| |||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42433590 aaaaggaaattattaccataaaagaaaactgtttttgacttt-ttataaattaattacacaatttcaatgcattaacta 42433667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 34192902 - 34192814
Alignment:
Q  41 taccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatat 132  Q
    ||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||    |||||||||||||||||||    
T  34192902 taccataaaataaaattatttttgactttattataaattaattacacaatttcaatgcattaactagta---tataatttcctttttcatat 34192814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 22451929 - 22451847
Alignment:
Q  22 tatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    |||||| |||| |||||||||||||||||| ||  | ||||||||||| |||||||||||||||||||||||||||||||||||    
T  22451929 tatcatgaaaggaaattattaccataaaaggaagctatttttgacttt-ttataaattaattacacaatttcaatgcattaact 22451847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 9278317 - 9278244
Alignment:
Q  63 tgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaac 139  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||    |||||||||||||||||||| |||||    
T  9278317 tgactttattataaattaattacacaatttcaatgcattaactatta---tataatttcctttttcatatctttaac 9278244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 29235394 - 29235294
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||   ||||||| ||||||||| |||||||| ||  | ||||||| ||||||||||||||||||||||| || |||||||||||||||    
T  29235394 cactggttaagcatcctataaaaggaaattattatcataaaaggaacctatttttgattttattataaattaattacacaaatttaatgcattaactact 29235295  T
Q  109 a 109  Q
    |    
T  29235294 a 29235294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 24843307 - 24843393
Alignment:
Q  10 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaat 96  Q
    |||| |||| |||| ||||||||  |||||||  |||||||| ||| || |||||||||||||||||||||||||||||||||||||    
T  24843307 actgattaagcataccataaaagagaattattgtcataaaaggaaactgattttgactttattataaattaattacacaatttcaat 24843393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 22956838 - 22956766
Alignment:
Q  35 aattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    |||| |||||||||||| ||| |||||||||| ||||||||||||||||||| ||||| |||| |||||||||    
T  22956838 aatttttaccataaaaggaaactgtttttgacattattataaattaattacataattttaatgtattaactac 22956766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 147
Target Start/End: Complemental strand, 10618123 - 10618042
Alignment:
Q  63 tgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaaccggtgccc 147  Q
    |||||||||||| ||||||||||||||||| | ||||||||||||||    ||||||| |||||||||||| |||||| ||||||    
T  10618123 tgactttattatcaattaattacacaatttaattgcattaactacta---tataattttctttttcatatccttaacctgtgccc 10618042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 30933376 - 30933448
Alignment:
Q  36 attattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    ||||||| | |||||| ||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  30933376 attattatcgtaaaagaaaaatgtttttaacttt-ttataaattaattacacaatttcaatgcattaattacta 30933448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 36057897 - 36057967
Alignment:
Q  28 aaaagtaaattattaccataaaagtaaattgtttttgact--ttattataaattaattacacaatttcaat 96  Q
    ||||| ||||||||| |||||||| ||| | |||||||||  || |||||||||||||| |||||||||||    
T  36057897 aaaaggaaattattatcataaaagaaaactttttttgactactttttataaattaattatacaatttcaat 36057967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 12652707 - 12652630
Alignment:
Q  91 ttcaatgcattaactactactccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttccc 170  Q
    |||||||||||||||||||    |||||||||||||||||||| |||||| |||| || || | | |||||||||||||||    
T  12652707 ttcaatgcattaactactat---ataatttcctttttcatatccttaaccagtgctccaggggcaccggttagcatttccc 12652630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 2e-45; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 54897467 - 54897308
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  54897467 cactggttaaacataccataaaaggaaattattaccataaaaggaaattgtttttgactttattataaattaattatacaatttcaatgcattaactact 54897368  T
Q  109 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 170  Q
    |    |||||||||||| ||||||| |||||| ||| |||||| | | |||||||||||||||    
T  54897367 a---tataatttcctttctcatatccttaaccagtgccccgggggcaccggttagcatttccc 54897308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 174
Target Start/End: Original strand, 789558 - 789720
Alignment:
Q  10 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    ||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  789558 actggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactacta 789657  T
Q  110 ctccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctttt 174  Q
        |||||||||||||||||| | |||||| ||| |||||| | | |||||||||||||||||||    
T  789658 ---tataatttcctttttcatacccttaacccgtgccccgggggcaccggttagcatttccctttt 789720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 172
Target Start/End: Complemental strand, 43944669 - 43944505
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||||||||||| |||| |||| |||  ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43944669 gggcactggttaagcataccatacaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaact 43944570  T
Q  106 actactccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccctt 172  Q
    ||||    |||||||||||||||||| | |||||| |||||| ||| | | |||||||||||||||||    
T  43944569 acta---tataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttccctt 43944505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 4268845 - 4269009
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||||  ||| |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  4268845 ggggcactggttaatcataccataaaagggaattattaccataaaaagaaactgtttttgacattattataaattaattacataatttcaatgcattaac 4268944  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 171  Q
    |||||    ||| |||||||||||||| | |||||| ||| |||||| | | ||||||||||||||||    
T  4268945 tacta---tatagtttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 4269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 169
Target Start/End: Original strand, 19503137 - 19503289
Alignment:
Q  14 gttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactcc 113  Q
    ||||| |||| ||||||||  ||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||        
T  19503137 gttaagcataccataaaagggaattattacaataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgtattaactagta---t 19503233  T
Q  114 ataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttcc 169  Q
    |||||||||||||||||||| |||||| || |||||||| | ||||||||||||||    
T  19503234 ataatttcctttttcatatccttaaccagtacccgggagcaccggttagcatttcc 19503289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 29591352 - 29591185
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||| ||||| |||| ||||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29591352 ggggcactagttaagcataccataaaaggtaattattaccataaaaggaaactgtttttgactttattataaattaagtacacaatttcaatgcattaac 29591253  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctttt 174  Q
    |||||    ||||||||||| |||||||  |||||| ||| |||||| | | | |||||||||||||||||    
T  29591252 tacta---tataatttccttattcatattcttaaccagtgccccgggggcaccagttagcatttccctttt 29591185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 4089306 - 4089141
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    ||||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  4089306 tggggcactggttaaacataccataaaagagaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaa 4089207  T
Q  104 ctactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 171  Q
    ||||||    ||||||| |||||||||| | |||| | ||| ||| || | | ||||||||||||||||    
T  4089206 ctacta---tataattttctttttcatacccttaatcagtgccccaggggcaccggttagcatttccct 4089141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 16536211 - 16536046
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||||||||||  ||| |||||||   ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  16536211 ggggcactggttaagaataccataaaatagaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaac 16536112  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 172  Q
    |||||    |||||||||||||||||| | |||| | ||| |||||| | | |||||||||||||||||    
T  16536111 tacta---tataatttcctttttcatacccttaatccgtgccccgggggcaccggttagcatttccctt 16536046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 36395261 - 36395138
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||||||||||| |||| ||||||||  |||||||| |||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  36395261 gggcactggttaagcataccataaaagggaattattatcataaaagaaaactgcttttgactttattataaattaattacacaatttcaatgcattaact 36395162  T
Q  106 actactccataatttcctttttcatat 132  Q
    ||||    |||||||||||||||||||    
T  36395161 acta---tataatttcctttttcatat 36395138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 54655903 - 54656038
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||||||||| ||  |||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  54655903 cactggttaagcatatcataagagagaattattatcctaaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaactact 54656002  T
Q  109 actccataatttcctttttcatatcattaaccggtgccc 147  Q
    |    |||||||||||||| ||||| |||||| ||||||    
T  54656003 a---tataatttccttttttatatccttaaccagtgccc 54656038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 32202514 - 32202642
Alignment:
Q  15 ttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactcca 114  Q
    |||| ||||||||||||| || |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    |    
T  32202514 ttaagcatatcataaaaggaa-ttattatcataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactacta---ta 32202609  T
Q  115 taatttcctttttcatatcattaaccggtgccc 147  Q
    ||||||||||||| ||||| |||||| ||||||    
T  32202610 taatttccttttttatatccttaacccgtgccc 32202642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 35 - 173
Target Start/End: Complemental strand, 15186376 - 15186240
Alignment:
Q  35 aattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatca 134  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||    |||||||||||||||||| |     
T  15186376 aattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatggattaactacta---tataatttcctttttcataccc 15186280  T
Q  135 ttaaccggtg-cccgggagaatcggttagcatttcccttt 173  Q
    |||||| ||| |||||| | | ||||||||||||||||||    
T  15186279 ttaaccagtgccccgggggcaccggttagcatttcccttt 15186240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 31680494 - 31680587
Alignment:
Q  13 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    |||||| |||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31680494 ggttaaacatatcataaaaatgaattattaccataaaaggaaattgtttttgactttattataaattaattatacaatttcaatgcattaacta 31680587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 6 - 172
Target Start/End: Original strand, 43202407 - 43202571
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||||||||||| | || ||||||||  ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||| |    
T  43202407 gggcactggttaagcttaccataaaagagaattattaccataaaagaaaactgtttttgacattattataaattaattacacaattttaatgcattaatt 43202506  T
Q  106 actactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 172  Q
    ||||    |||||||||||||||||| | |||||  ||| |||||| | | |||||||||||||||||    
T  43202507 acta---tataatttcctttttcatacccttaactagtgccccgggggcaccggttagcatttccctt 43202571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 4220348 - 4220226
Alignment:
Q  14 gttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactcc 113  Q
    ||||| |||| ||||||||  ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||        
T  4220348 gttaagcataccataaaagggaattattac-ataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaactacta---t 4220253  T
Q  114 ataatttcctttttcatatcattaacc 140  Q
    |||||||||||||||||||| ||||||    
T  4220252 ataatttcctttttcatatccttaacc 4220226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 32217207 - 32217069
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| |||||| |||| ||||||||  |||||||| |||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32217207 ggggcacaggttaagcataccataaaagggaattattatcataaaaa-aaactgtttttgactttattataaattaattacacaatttcaatgcattaac 32217109  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgccc 147  Q
    |||||    |||||||||||||| ||||| |||||| ||||||    
T  32217108 tacta---tataatttccttttttatatccttaaccagtgccc 32217069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 50619248 - 50619125
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||||||||||| |||| ||||||||  ||||||||||||||||| ||| ||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  50619248 gggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttttactttattataaattaagtacacaatttcaatgcattaact 50619149  T
Q  106 actactccataatttcctttttcatat 132  Q
    ||||    ||||||| |||||||||||    
T  50619148 acta---tataattttctttttcatat 50619125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 3783534 - 3783687
Alignment:
Q  15 ttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactcca 114  Q
    |||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||||||||| ||||||| ||||||||||||||||    |    
T  3783534 ttaagcataccataaaagggaattattaccataaaagaaaactgtttttgactttattatcaattaattaaacaattttaatgcattaactacta---ta 3783630  T
Q  115 taatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccc 170  Q
    ||||||| ||||||||||  ||||||||||||| ||| | | |||||||||||||||    
T  3783631 taatttcatttttcatatgtttaaccggtgccccggaggcaccggttagcatttccc 3783687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 30387167 - 30387261
Alignment:
Q  15 ttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    |||| ||||||||||||   ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30387167 ttaagcatatcataaaaaggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactacta 30387261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 179
Target Start/End: Complemental strand, 7769081 - 7768929
Alignment:
Q  25 cataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctt 124  Q
    ||||||||  ||||||||||||||||| ||| ||||||| || ||||||||||||||||||||||||||||| ||||||||||||    |||||||||||    
T  7769081 cataaaagagaattattaccataaaaggaaactgtttttaacattattataaattaattacacaatttcaatacattaactacta---tataatttcctt 7768985  T
Q  125 tttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttttgaaaa 179  Q
    ||||||| | |||||| ||| |||||| | | || |||||||||||||||| ||||    
T  7768984 tttcatacccttaaccagtgccccgggggtaccgattagcatttcccttttaaaaa 7768929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 12356403 - 12356275
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||| ||||||||  |||||||| |||||||| ||| |||||||||||||||||||||||||||| | |||||||||| ||||||||||    
T  12356403 cactggttaagcataccataaaagagaattattatcataaaaggaaactgtttttgactttattataaattaattatataatttcaatgtattaactact 12356304  T
Q  109 actccataatttcctttttcatatcattaacc 140  Q
    |    |||||||||||||||||||| ||||||    
T  12356303 a---tataatttcctttttcatatccttaacc 12356275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 18067910 - 18068066
Alignment:
Q  13 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactc 112  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| | |||||||| |||| |||||||||||||||||||| ||||||||||||||||       
T  18067910 ggttaaacataccataaaagggaattattaccataaaaggaaactatttttgacattatgataaattaattacacaattttaatgcattaactacta--- 18068006  T
Q  113 cataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 171  Q
     |||||||||||||||||| | |||||| ||| |||||| | | ||||||||||||||||    
T  18068007 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 18068066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 46149098 - 46148978
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||| ||||||||  ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||| || |    
T  46149098 cactggttaaacataccataaaagagaattattaccataaaaagaaattgtttttgactttattataaattaattacacaatttcaatgtattaattatt 46148999  T
Q  109 actccataatttcctttttcatat 132  Q
    |    |||||||||||||||||||    
T  46148998 a---tataatttcctttttcatat 46148978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 174
Target Start/End: Original strand, 47231902 - 47232062
Alignment:
Q  12 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactact 111  Q
    ||||||| |||| ||||||||  |||||||| |||||||| ||| |||||||||||||||||| |||||||||||  |||||||||||||||||| ||      
T  47231902 tggttaaacataccataaaagggaattattatcataaaaggaaactgtttttgactttattatcaattaattacattatttcaatgcattaactatta-- 47231999  T
Q  112 ccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttccctttt 174  Q
      |||||||||||||||| ||| |||||| |||| ||||| | | |||||||||||||||||||    
T  47232000 -tataatttcctttttcacatccttaaccagtgctccgggggcaccggttagcatttccctttt 47232062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 6164256 - 6164152
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||| ||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||  |||||||||||||||||||||||||||||||||||||||    
T  6164256 ggggtactggttaagcataccataaaagagaattattaccataaaaggaaactgttttttgctttattataaattaattacacaatttcaatgcattaac 6164157  T
Q  105 tacta 109  Q
    |||||    
T  6164156 tacta 6164152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 147
Target Start/End: Original strand, 24679671 - 24679804
Alignment:
Q  10 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    |||| |||| |||| ||||||||  ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  24679671 actgattaagcataccataaaagagaattattaccataaagg-aaattgtttttaactttattataaattaattacacaatttcaatacattaactacta 24679769  T
Q  110 ctccataatttcctttttcatatcattaaccggtgccc 147  Q
        |||||||| ||||||||||| |||||| ||||||    
T  24679770 ---tataatttcttttttcatatccttaaccagtgccc 24679804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 140
Target Start/End: Complemental strand, 39844040 - 39843938
Alignment:
Q  35 aattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatca 134  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    |||||||| |||||||||||     
T  39844040 aattattaccataaaaggaaactgtttttgactttattataaattaattacataatttcaatgcattaactacta---tataatttcatttttcatatcc 39843944  T
Q  135 ttaacc 140  Q
    ||||||    
T  39843943 ttaacc 39843938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 171
Target Start/End: Complemental strand, 55882843 - 55882683
Alignment:
Q  7 ggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    ||||| ||||||  ||| ||||||||| |||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  55882843 ggcacgggttaagtataccataaaagtgaatt-ttaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaatta 55882745  T
Q  107 ctactccataatttcctttttcatatcattaaccggtgcccgggaga-atcggttagcatttccct 171  Q
    |||    |||||||  ||||||||||| |||||  |||||| ||||| | ||||||||||||||||    
T  55882744 cta---tataattt-ttttttcatatccttaacgagtgccccggagacaccggttagcatttccct 55882683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 133
Target Start/End: Original strand, 30154186 - 30154311
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| || | ||||||||  |||||||| |||| ||| ||||||||||||| |||||||||||||||||||| ||||||||| |||||||    
T  30154186 ggggcactggttaagcacaccataaaagagaattattatcatataaggaaattgtttttgattttattataaattaattacataatttcaatacattaac 30154285  T
Q  105 tactactccataatttcctttttcatatc 133  Q
    |||||    ||||||||||||||||||||    
T  30154286 tacta---tataatttcctttttcatatc 30154311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 33108696 - 33108860
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| |||||| |||| |||||||   ||||||||||||||||| ||| |||||||||||||||||| ||||||||| || ||||||||||||||||    
T  33108696 ggggcacgggttaagcataccataaaaaggaattattaccataaaaggaaactgtttttgactttattatcaattaattatactatttcaatgcattaac 33108795  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccctt 172  Q
    || ||    |||||||||||||||||||| |||||| |||||| ||| | | |||||| ||||||||||    
T  33108796 tatta---tataatttcctttttcatatc-ttaaccagtgccccggaggcaccggttaacatttccctt 33108860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 54945805 - 54945940
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    |||||||||||  ||| |||||||   |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  54945805 gcactggttaagtataccataaaaaggaattat-accataaaacgaaattgtttttgactttattataaattaattacacaatttcaatacattaactgc 54945903  T
Q  108 tactccataatttcctttttcatatcattaaccggtgccc 147  Q
    ||    |||||||||||||||||||| |||||| ||||||    
T  54945904 ta---tataatttcctttttcatatccttaaccagtgccc 54945940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 42898774 - 42898908
Alignment:
Q  12 tggttaatcatatcataaaagtaaattattacca--taaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    ||||||| |||| ||||||||  |||||||||||  |||||  ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42898774 tggttaagcataccataaaagagaattattaccacataaaaagaaactatttttgactttattataaattaattacacaatttcaatgcattaactacta 42898873  T
Q  110 ctccataatttcctttttcatatcattaaccggtgccc 147  Q
        |||||||||||||| ||||| |||||| ||||||    
T  42898874 ---tataatttccttttttatatccttaaccagtgccc 42898908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 147
Target Start/End: Complemental strand, 54054675 - 54054572
Alignment:
Q  41 taccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaacc 140  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||    |||||||| ||||||||||| ||||||    
T  54054675 taccataaaaggaaattgtttttgactttattatcaattaattacactatttcaatgcattaactatta---tataatttcttttttcatatccttaacc 54054579  T
Q  141 ggtgccc 147  Q
    |||||||    
T  54054578 ggtgccc 54054572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 170
Target Start/End: Complemental strand, 28755750 - 28755621
Alignment:
Q  38 tattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcatta 137  Q
    ||||| |||||||| ||| ||||| | |||||||||| ||||||||||||||||||||||||||||||||||    |||||||||||||||||||| |||    
T  28755750 tattatcataaaaggaaactgtttctaactttattatcaattaattacacaatttcaatgcattaactacta---tataatttcctttttcatatcctta 28755654  T
Q  138 accggtgcccgggagaatcggttagcatttccc 170  Q
    ||| |||||| ||   | |||||||||||||||    
T  28755653 accagtgccctgggacaccggttagcatttccc 28755621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 172
Target Start/End: Complemental strand, 37988091 - 37987934
Alignment:
Q  12 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactact 111  Q
    ||||||| ||||  |||||||  ||||||||| ||||||| ||| ||||||| || ||||||||||||||||||||||||||||| ||||||||||||      
T  37988091 tggttaagcatactataaaagagaattattacaataaaaggaaactgtttttaacattattataaattaattacacaatttcaatacattaactacta-- 37987994  T
Q  112 ccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccctt 172  Q
      |||||||||||||||||| | ||||||  | ||| |||| | |||||| ||||||||||    
T  37987993 -tataatttcctttttcatacccttaaccattaccctggagcaccggttaacatttccctt 37987934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 53655903 - 53656032
Alignment:
Q  7 ggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    ||||||| |||| |||| |||||||  |||||||||||||||||  ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||    
T  53655903 ggcactgattaagcataccataaaatgaaattattaccataaaataaaattatttttaactttattataaattaattacacaatttcaatacattaacta 53656002  T
Q  107 ctactccataatttcctttttcatatcattaac 139  Q
     ||    |||||||| ||||||||||| |||||    
T  53656003 tta---tataatttcttttttcatatccttaac 53656032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 16821015 - 16820912
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||| ||| ||  | |||||||||||||| ||||||||| ||||||||||||||||     
T  16821015 ggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactgcgtatgactttattataagttaattacagaatttcaatgcattaat 16820916  T
Q  105 tact 108  Q
    ||||    
T  16820915 tact 16820912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 41265620 - 41265518
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||||||||||| |||| || ||||| |||||||||| ||||||| ||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  41265620 gggcactggttaaacataccaaaaaagaaaattattacaataaaagaaaactgtttttgatttt-ttataaattaattacacaatttcactgcattaact 41265522  T
Q  106 acta 109  Q
    ||||    
T  41265521 acta 41265518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 52533816 - 52533974
Alignment:
Q  13 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactc 112  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| |||||| ||||||||||| |||||||||  |||||||| ||||||||||||||       
T  52533816 ggttaaacataccataaaagggaattattaccataaaaggaaactgttttcgactttattatcaattaattattcaatttcagtgcattaactacta--- 52533912  T
Q  113 cataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttcccttt 173  Q
     |||||||||||||||||||  |||||| ||| || ||| | | |||||| |||||||||||    
T  52533913 tataatttcctttttcatattcttaaccagtgtcctggaggcaccggttaacatttcccttt 52533974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 39877270 - 39877371
Alignment:
Q  5 ggggcactggttaatcatat--cataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcatta 102  Q
    |||||||||||||| |||||  ||||||||  ||||||||| ||||||  ||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  39877270 ggggcactggttaagcatataccataaaagagaattattactataaaatgaaactgtttttgactttattataaattaattacacaatttcaatacatta 39877369  T
Q  103 ac 104  Q
    ||    
T  39877370 ac 39877371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 46688264 - 46688331
Alignment:
Q  41 taccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46688264 taccataaaaggaaactgcttttgactttattataaattaattacacaatttcaatgcattaactact 46688331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 53268875 - 53268782
Alignment:
Q  12 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    ||||||| |||| || ||||| |||||||||  ||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  53268875 tggttaagcataccaaaaaagaaaattattattataaaagaaaattgtttttgacttt-ttataaattaattacacaattttaatgcattaacta 53268782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 31517327 - 31517227
Alignment:
Q  7 ggcactggttaatcatatcataaaagtaaattattaccataaaagtaa-attgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    |||||||||||| |||| |||| |||  ||||||||||||||||  || ||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  31517327 ggcactggttaagcataccatataagagaattattaccataaaaaaaacattatttttgactttattatcaattaattacactatttcaatgcattaact 31517228  T
Q  106 a 106  Q
    |    
T  31517227 a 31517227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 49915301 - 49915218
Alignment:
Q  26 ataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    ||||||| |||||||||  ||||||| ||| ||||||| |||||||||||||||||||||||||||||||| |||||| |||||    
T  49915301 ataaaaggaaattattattataaaaggaaactgttttttactttattataaattaattacacaatttcaatacattaattacta 49915218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 50603391 - 50603292
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaat-tgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    |||| ||||||||| |||| ||||||||  |||||||| |||||||  |||  |||||||||| ||||||||||||||||||||||||||||||||||||    
T  50603391 ggggtactggttaagcataccataaaagagaattattatcataaaaaaaaaactgtttttgacattattataaattaattacacaatttcaatgcattaa 50603292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 5091638 - 5091798
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||| ||||||||  ||||||||| ||||||| ||| ||||| |||||||||||||||||||||||||||||| |||  ||||| || |    
T  5091638 cactggttaagcata-cataaaagggaattattactataaaaggaaactgtttatgactttattataaattaattacacaattttaatatattaattatt 5091736  T
Q  109 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 172  Q
    |    |||||||  ||||||||||  |||||| ||| |||||||| | ||||||| |||||||||    
T  5091737 a---tataattttatttttcatattcttaaccagtgccccgggagtaccggttagtatttccctt 5091798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 140
Target Start/End: Complemental strand, 42815237 - 42815140
Alignment:
Q  41 taccataaaagt-aaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaac 139  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||| ||||||||| |||||||||  |    |||||||||||||||||||| |||||    
T  42815237 taccataaaagagaaactgtttttgactttattataaattaattacataatttcaatacattaactatga---tataatttcctttttcatatccttaac 42815141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 52697210 - 52697082
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||| ||||| |||||||||||||  ||||||||| ||||| | ||||| ||||||||||||||||||||| |||| | ||||| |||| ||||||||||    
T  52697210 cactcgttaaacatatcataaaagagaattattacaataaaggaaaattatttttgactttattataaatt-attatataattttaatgtattaactact 52697112  T
Q  109 actccataatttcctttttcatatcattaaccg 141  Q
    |    |||||||  ||||||||||| |||||||    
T  52697111 a---tataattttgtttttcatatccttaaccg 52697082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 8133862 - 8133782
Alignment:
Q  12 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttc 93  Q
    ||||||| |||| ||||||||  ||||||||||||||||| ||| | |||||||||||||||||||||||||||||| ||||    
T  8133862 tggttaaacata-cataaaagataattattaccataaaagaaaactatttttgactttattataaattaattacacattttc 8133782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 171
Target Start/End: Complemental strand, 50167685 - 50167590
Alignment:
Q  72 tataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 170  Q
    |||||||||||||||||||||||||||||||||||||     ||||||| |||||||||||| |||||| ||| |||| ||  | |||||||||||||||    
T  50167685 tataaattaattacacaatttcaatgcattaactact-----ataattttctttttcatatctttaaccagtgccccgagaacaccggttagcatttccc 50167591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 53003983 - 53004063
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaa 89  Q
    ||||| |||| |||||||||||||  ||||||||   |||||| ||||| ||||||||||||||||| |||||||||||||    
T  53003983 cactgattaagcatatcataaaagagaattattattttaaaaggaaattatttttgactttattatacattaattacacaa 53004063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 173
Target Start/End: Complemental strand, 8133787 - 8133731
Alignment:
Q  117 atttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttcccttt 173  Q
    |||| |||||||||||| |||||| ||| ||||||  | ||||||||||||||||||    
T  8133787 attttctttttcatatccttaaccagtgtccgggaagaccggttagcatttcccttt 8133731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 39877556 - 39877612
Alignment:
Q  114 ataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccc 170  Q
    ||||||| |||||||||||| |||||| ||||||||| | | |||||| ||||||||    
T  39877556 ataattttctttttcatatcgttaaccagtgcccgggggtaccggttaacatttccc 39877612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 170
Target Start/End: Complemental strand, 31438809 - 31438646
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  |||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31438809 ggggcactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaac 31438710  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 170  Q
    ||||     |||||||||||||||||||| |||||| ||| |||||||| | |||||||||||||||    
T  31438709 tactgt---ataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttccc 31438646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 26387089 - 26387218
Alignment:
Q  7 ggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    |||||||||||| |||| ||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26387089 ggcactggttaagcataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 26387188  T
Q  107 ctactccataatttcctttttcatatcattaac 139  Q
    |||    |||||||||||||||||||| |||||    
T  26387189 cta---tataatttcctttttcatatccttaac 26387218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 172
Target Start/End: Original strand, 34442556 - 34442719
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34442556 gggcactggttaagcataccataaaagggaattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaact 34442655  T
Q  106 actactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccctt 172  Q
    ||||    ||||| | |||||||||||| |||||  |||||| || | | |||||||||||||||||    
T  34442656 acta---tataatcttctttttcatatccttaacatgtgccccggggcaccggttagcatttccctt 34442719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 167
Target Start/End: Original strand, 3668136 - 3668295
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| ||||  ||||||| |||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  3668136 ggggcactggttaaacatactataaaaggaaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaac 3668235  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcattt 167  Q
    |||||    ||||||||||||| |||| | |||||| ||| ||||| | | ||||||||||||    
T  3668236 tacta---tataatttccttttccatacccttaaccagtgtccgggggcaccggttagcattt 3668295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 20553094 - 20552955
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||     
T  20553094 ggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaat 20552995  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgccc 147  Q
    |||||    |||||||||||||||||||| |||||| ||||||    
T  20552994 tacta---tataatttcctttttcatatccttaaccagtgccc 20552955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 170
Target Start/End: Complemental strand, 44588065 - 44587902
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||| ||||| |||| ||||||||  ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  44588065 ggggcacttgttaagcataccataaaagggaattattaccataaaaggaaactgttttttactttattataaattaattacacaatttcaatgtattaac 44587966  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 170  Q
    |||||    |||||||||||||| ||||| |||||||||| |||||| | | |||||||||||||||    
T  44587965 tacta---tataatttccttttttatatccttaaccggtgccccgggggcaccggttagcatttccc 44587902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 22887910 - 22887749
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    ||||||||||| |||| ||||||||  ||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  22887910 gcactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttaactttattataaattaattacataatttcaatgcattaactac 22887811  T
Q  108 tactccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccct 171  Q
    ||    |||||||| ||||||||||| ||||||  ||||| ||| | ||||||||||||||||||    
T  22887810 ta---tataatttcttttttcatatccttaaccactgccccggaggcatcggttagcatttccct 22887749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 27856419 - 27856584
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  27856419 ggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaac 27856518  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 172  Q
    || ||    ||||||||||||||||||   |||||| ||| |||||| | | |||||| ||||||||||    
T  27856519 tatta---tataatttcctttttcatactcttaaccagtgccccgggggcaccggttaacatttccctt 27856584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 30486373 - 30486208
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||  ||||||||||||||||||| |||||||    
T  30486373 ggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatagtttaattacacaatttcaatacattaac 30486274  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 172  Q
    |||||    |||||||||||||||||||| |||||| ||| |||||| | | | |||||||||||||||    
T  30486273 tacta---tataatttcctttttcatatccttaaccagtgccccgggggcaccagttagcatttccctt 30486208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 5 - 167
Target Start/End: Complemental strand, 4381958 - 4381798
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| |||||||   ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  4381958 ggggcactggttaagcataccataaaatggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaac 4381859  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcattt 167  Q
    |||||    |||||||||||||||||| | |||||| |||| ||||| | | ||||||||||||    
T  4381858 tacta---tataatttcctttttcatacccttaaccagtgcaccgggggcaccggttagcattt 4381798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 561541 - 561708
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||| |||| |||| |||| ||||||||  ||||||||  ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  561541 ggggtactgattaagcataccataaaagagaattattattataaaaggaaactgattttgactttattataaattaattacacaatttcaatgcattaac 561640  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctttt 174  Q
    |||||    |||||||||||||||||||| |||||| ||| |||||| | | |||||||||||||||||||    
T  561641 tacta---tataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccctttt 561708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 5093562 - 5093693
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||| ||||| |||| |||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  5093562 ggggcactagttaaacataccataaaaggaaattattatcataaaaggaaattgcttttgactttattataaattaattacacaattttaatgcattaac 5093661  T
Q  105 tactactccataatttcctttttcatatcattaac 139  Q
    ||||| |   ||||||||||||||||||| |||||    
T  5093662 tactatt---taatttcctttttcatatccttaac 5093693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 43637305 - 43637165
Alignment:
Q  27 taaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttt 126  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||| |    
T  43637305 taaaaggaaattattaccataaaaagaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta---tataatttccttat 43637209  T
Q  127 tcatatcattaaccggtgcccgggagaatcggttagcatttccc 170  Q
    ||||||| |||||| ||| |  || | | |||||||||||||||    
T  43637208 tcatatccttaaccagtgtctcggggcaccggttagcatttccc 43637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 6580352 - 6580213
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  6580352 ggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacataatttcaatgcattaac 6580253  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgccc 147  Q
    |||||    ||| |||||||||||||| | |||||| ||||||    
T  6580252 tacta---tatagtttcctttttcatacccttaaccagtgccc 6580213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 1859324 - 1859221
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1859324 gggcactggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaattacataatttcaatgcattaact 1859225  T
Q  106 acta 109  Q
    ||||    
T  1859224 acta 1859221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 8969430 - 8969572
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||| ||||| ||||  ||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||||| ||||||||||||||||    
T  8969430 ggggcactagttaagcatactataaaaggaaattattaccataaaaggaaactgcttttgactttattataaattaattacactatttcaatgcattaac 8969529  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccggg 150  Q
    |||||    ||||||| |||||||||||| |||||  |||||||||    
T  8969530 tacta---tataattttctttttcatatccttaactagtgcccggg 8969572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 172
Target Start/End: Complemental strand, 31390172 - 31390010
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    |||| |||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  31390172 gcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacataatttcaatacattaactac 31390073  T
Q  108 tactccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccctt 172  Q
    ||    |||||||||||||||||||| |||||  |||||| ||| | | | |||||||||||||||    
T  31390072 ta---tataatttcctttttcatatccttaactagtgccccggaggcaccagttagcatttccctt 31390010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 22567762 - 22567633
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    |||| |||||| |||| ||||||||  ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22567762 gcacgggttaagcataccataaaagagaattattaccataaaaggaaattatttttgactttattataaattaattacacaatttcaatacattaactac 22567663  T
Q  108 tactccataatttcctttttcatatcattaacc 140  Q
    ||    |||||||| ||||||||||| ||||||    
T  22567662 ta---tataatttcttttttcatatccttaacc 22567633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 22068343 - 22068481
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  22068343 ggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattatacaatttcaatgca-taac 22068441  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgccc 147  Q
    |||||    |||||| ||||||||||||| |||||| ||||||    
T  22068442 tacta---tataattccctttttcatatccttaaccagtgccc 22068481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 32860260 - 32860126
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||| ||||||||  ||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32860260 cactggttaagcataccataaaagagaattattac-ataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaaatact 32860162  T
Q  109 actccataatttcctttttcatatcattaaccggtgccc 147  Q
    |    |||||||||||||| ||||| |||||| ||||||    
T  32860161 a---tataatttccttttttatatccttaacccgtgccc 32860126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 106
Target Start/End: Original strand, 25782860 - 25782957
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    |||||||||| |||| ||||||||  |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25782860 cactggttaagcataccataaaagggaattattatcataaaagaaaattgtttttgactttattataaaataattacacaatttcaatgcattaacta 25782957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 4022506 - 4022606
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| ||||||||||||| ||||||||| |||||||| ||| ||||| |||||||||||||||||||||||| ||||||||| |||||||||||    
T  4022506 cactggttaaacatatcataaaaggaaattattatcataaaaggaaactgtttctgactttattataaattaattacagaatttcaatacattaactact 4022605  T
Q  109 a 109  Q
    |    
T  4022606 a 4022606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 172
Target Start/End: Original strand, 38590904 - 38591062
Alignment:
Q  12 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactact 111  Q
    ||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||| ||| |||||||||||       
T  38590904 tggttaagcataccataaaagggaattattaccataaaagaaaactgtttttgactttattatcaattaattacacaattttaatacattaactactgt- 38591002  T
Q  112 ccataatttcctttttcatatcattaaccggtgcccgggaga-atcggttagcatttccctt 172  Q
      |||||||||||||||||||  |||||| ||||||  | || | |||||||||||||||||    
T  38591003 --ataatttcctttttcatattcttaaccagtgccccagggacaccggttagcatttccctt 38591062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 35851776 - 35851913
Alignment:
Q  7 ggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    |||| ||||||| |||| ||||||||  ||||||||||||||||  ||| |||||||||||||||||| |||||||||||  ||||||||||||||||||    
T  35851776 ggcattggttaagcataccataaaagagaattattaccataaaatgaaactgtttttgactttattatcaattaattacattatttcaatgcattaacta 35851875  T
Q  107 ctactccataatttcctttttcatatcattaaccggtgccc 147  Q
     ||    |||||||||||||||| ||| |||||||||||||    
T  35851876 tta---tataatttcctttttcacatccttaaccggtgccc 35851913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 2898230 - 2898102
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    ||||| |||| |||| ||||||||  ||||||||  ||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2898230 cactgattaaacataccataaaagagaattattatgatagaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactact 2898131  T
Q  109 actccataatttcctttttcatatcattaacc 140  Q
    |    ||||||| |||||||||||| ||||||    
T  2898130 a---tataattttctttttcatatccttaacc 2898102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 13574053 - 13574150
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    |||||| |||||| |||| |||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  13574053 gggcacgggttaagcataccataaaaggaaattattaccataaaaagaaactgtttttgactttattataaattaattacacaatttcaatacattaa 13574150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 32360892 - 32361056
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||| ||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||||||||| |  ||||||||||||||||    
T  32360892 ggggcattggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattatattatttcaatgcattaac 32360991  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 171  Q
    || ||    ||||||| |||||||| ||| |||||| ||| |||||| | | ||||||||||||||||    
T  32360992 tatta---tataattttctttttcacatccttaaccagtgccccgggggcaccggttagcatttccct 32361056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 38296317 - 38296201
Alignment:
Q  28 aaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttccttttt 127  Q
    ||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||    ||||||| ||||||    
T  38296317 aaaagaaaattattaccataaaaagaaactgtttttgactttattataaattaattacacaatttcaatgtattaattacta---tataattttcttttt 38296221  T
Q  128 catatcattaaccggtgccc 147  Q
    |||||| |||||| ||||||    
T  38296220 catatctttaaccagtgccc 38296201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 147
Target Start/End: Complemental strand, 27584900 - 27584762
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    |||||||||||||  ||| ||| || |  ||||||||||||||||| ||| || |||||| |||||||||||||||||||||||||||||||| ||||||    
T  27584900 gggcactggttaagtataccatgaatgagaattattaccataaaaggaaactgcttttgattttattataaattaattacacaatttcaatgctttaact 27584801  T
Q  106 actactccataatttcctttttcatatcattaaccggtgccc 147  Q
    ||||    ||||||||| |||||||||| ||||||| |||||    
T  27584800 acta---tataatttcccttttcatatccttaaccgatgccc 27584762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 26891722 - 26891850
Alignment:
Q  41 taccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaacc 140  Q
    ||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||    |||||||||||||| ||||| |||| |    
T  26891722 taccataaaaggaaactatttttgactttattataaattaattacacaatttcaatgcattaactaata---tataatttccttttttatatccttaatc 26891818  T
Q  141 ggtg-cccgggagaatcggttagcatttccct 171  Q
     ||| |||||| | | ||||||||||||||||    
T  26891819 agtgtcccgggggcaccggttagcatttccct 26891850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 11021260 - 11021375
Alignment:
Q  20 catatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatt 119  Q
    |||| ||||||||  ||||||||||| ||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |    ||||||    
T  11021260 cataccataaaagggaattattaccacaaaagaaaactgtttttgactttattatatattaattacacaatttcaatgcattaactacca---tataatt 11021356  T
Q  120 tcctttttcatatcattaa 138  Q
    || ||||||||||| ||||    
T  11021357 tcttttttcatatctttaa 11021375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 5881374 - 5881243
Alignment:
Q  15 ttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact-actactcc 113  Q
    |||| |||| ||||||||  |||||||| |||||||| ||| | |||||||||||||||| |||||||||||||||||||||||||  | | ||||||      
T  5881374 ttaagcataccataaaagataattattatcataaaaggaaactctttttgactttattatcaattaattacacaatttcaatgcatgcattaactactat 5881275  T
Q  114 ataatttcctttttcatatcattaaccggtgc 145  Q
    |||||||||||||||||||| |||||| ||||    
T  5881274 ataatttcctttttcatatccttaacctgtgc 5881243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 28601126 - 28600991
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    ||||||||||| |||| ||||||||  ||||||||||||||||  ||| ||||||| |||||||||| ||||||||| |||||||||||||||     ||    
T  28601126 gcactggttaagcataccataaaagagaattattaccataaaaagaaactgtttttaactttattatcaattaattatacaatttcaatgcat----aac 28601031  T
Q  108 tactccataatttcctttttcatatcattaaccggtgccc 147  Q
    ||||  |||||| ||||||||||||| |||||| ||||||    
T  28601030 tactttataattccctttttcatatccttaaccagtgccc 28600991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 29102304 - 29102405
Alignment:
Q  3 ttggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcatta 102  Q
    ||||| || ||||||| |||||||||||||  ||||||||| ||||||| ||| |||||||||||||||||||||||||||| | |||||||||| ||||    
T  29102304 ttgggacattggttaaacatatcataaaagataattattactataaaagaaaactgtttttgactttattataaattaattataaaatttcaatgtatta 29102403  T
Q  103 ac 104  Q
    ||    
T  29102404 ac 29102405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 15079011 - 15079085
Alignment:
Q  34 aaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  15079011 aaattattatcataaaaggaaattgtttttgacttt-ttataaattaattacacaatttcaatacattaactacta 15079085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 25772254 - 25772149
Alignment:
Q  25 cataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctt 124  Q
    ||||||||  |||||||| |||||| | ||||| |||||||||||||||||||||||||||||||||||| |||||||| || |  |  |||||||||||    
T  25772254 cataaaagggaattattatcataaagggaaattatttttgactttattataaattaattacacaatttcattgcattaattatt--tttataatttcctt 25772157  T
Q  125 tttcatat 132  Q
    ||||||||    
T  25772156 tttcatat 25772149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 39531981 - 39531883
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| ||||||  ||||| |||| ||||||||||||| ||| || |||||||| | ||||||||||||||||||||||||||||||||||||||    
T  39531981 cactggttaagcatatcgaaaaagaaaat-attaccataaaagaaaactggttttgactct-ttataaattaattacacaatttcaatgcattaactact 39531884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 15146789 - 15146694
Alignment:
Q  10 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    ||||||||| |||| || ||| | ||||||||| |||||||| ||||| ||||||||||| |||||||||||||| |||||||||||| ||||||||    
T  15146789 actggttaaacataccaaaaaggaaaattattatcataaaaggaaattatttttgacttt-ttataaattaattatacaatttcaatgtattaacta 15146694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 34123057 - 34123148
Alignment:
Q  14 gttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    ||||| ||||| | ||||| ||||||| |||||||||| ||| ||||||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  34123057 gttaagcatattaaaaaagaaaattatgaccataaaaggaaactgtttttgacttt-ttataaattaattacacaaattcaaagcattaacta 34123148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 10820622 - 10820546
Alignment:
Q  28 aaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    ||||| |||||||||||||||||| ||| ||||||| ||||| |||||||||||||| ||||| |||||| ||||||||    
T  10820622 aaaagaaaattattaccataaaaggaaactgtttttaacttt-ttataaattaatta-acaatctcaatgtattaacta 10820546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 5310603 - 5310546
Alignment:
Q  171 ttttgaaaataacctgaaataatttctcatgattaccatgatcaatctttcaaccttt 228  Q
    |||| |||||||  ||||||| ||||||||||||| |||||||||| |||||||||||    
T  5310603 ttttaaaaataagttgaaatactttctcatgattatcatgatcaatttttcaaccttt 5310546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 44331934 - 44331841
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaa-tttcaatgca 99  Q
    ||||||| ||||||||||  | ||||| || ||||| ||||||||| ||||| || |||||||  |||| |||||||||||||| ||||||||||    
T  44331934 gggcactagttaatcatacaaaaaaaggaatttatttccataaaaggaaatt-ttgttgacttatttatgaattaattacacaagtttcaatgca 44331841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 3e-44; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 5 - 168
Target Start/End: Complemental strand, 2350815 - 2350654
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||| ||||||||| |||||||||||||  ||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||| |||||||    
T  2350815 ggggtactggttaagcatatcataaaagggaattattaccataaaaggaaactatttttgactttattataaattaattacacaatttcaatacattaac 2350716  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttc 168  Q
    |||||    |||||||||||||||||||| |||||| ||| |||||||| | |||||||||||||    
T  2350715 tacta---tataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttc 2350654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 170
Target Start/End: Complemental strand, 392259 - 392096
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  392259 ggggcactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaac 392160  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 170  Q
    |||||    |||||||||||||||||| | |||||| ||| |||||| | | |||||||||||||||    
T  392159 tacta---tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 392096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 3515930 - 3515763
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    |||||||| |||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  3515930 tggggcacaggttaaacataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaa 3515831  T
Q  104 ctactactccataatttcctttttcatatcattaaccggtgccc-gggagaatcggttagcatttcccttt 173  Q
    ||||||    |||||||||||||||||| | |||||| |||||| ||| | | ||||||||||||||||||    
T  3515830 ctacta---tataatttcctttttcatacccttaaccagtgccctgggggcaccggttagcatttcccttt 3515763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 26467147 - 26467286
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||  |||| ||||||||  ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  26467147 ggggcactggttagacataccataaaagggaattattaccataaaaggaaactatttttgactttattataaattaattacacaatttcaatgcattaac 26467246  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgccc 147  Q
    |||||    |||||||||||||||||||| |||||||||||||    
T  26467247 tacta---tataatttcctttttcatatccttaaccggtgccc 26467286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 1391205 - 1391365
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||| ||||||||  |||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1391205 cactggttaagcataccataaaagggaattattatcataaaagaaaactgtttttgactttattataaattaattatacaatttcaatgcattaactact 1391304  T
Q  109 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccctt 172  Q
    |    |||||||||||||||||||| |||| | || ||| |||| | |||||||||||||||||    
T  1391305 a---tataatttcctttttcatatccttaatcagtaccccggagcaccggttagcatttccctt 1391365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 18276635 - 18276804
Alignment:
Q  5 ggggcactggttaatcatat---cataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcatt 101  Q
    |||||||||||||| ||||    |||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  18276635 ggggcactggttaagcataataccataaaaggaaattattaccataaaaggaaactgtttttgactttattataaattaattacacaaattcaatgcatt 18276734  T
Q  102 aactactactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccctttt 174  Q
    ||||||||    |||||||||||||||||||| |||||| |||||| || | | | |||| ||||||||||||    
T  18276735 aactacta---tataatttcctttttcatatccttaaccagtgcccaggggcaccagttaacatttccctttt 18276804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 29451138 - 29451301
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| |||||| |||| ||||||||  |||||||| |||||||| ||| ||| |||||||||||||||| |||||||||||||||||||||||||||    
T  29451138 ggggcacgggttaagcataccataaaagggaattattatcataaaaggaaactgtgtttgactttattataatttaattacacaatttcaatgcattaac 29451237  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccct 171  Q
    |||||    |||||||||||||||||||| |||||||||||||||  | | | ||||||||||||||    
T  29451238 tacta---tataatttcctttttcatatccttaaccggtgcccggaggcaccagttagcatttccct 29451301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 173
Target Start/End: Original strand, 32929531 - 32929697
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  32929531 ggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaat 32929630  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttt 173  Q
    || ||    |||||||||||||||||| | ||||||  || |||||| | | ||||||||||||||||||    
T  32929631 taata---tataatttcctttttcatacccttaaccattgccccgggggcaccggttagcatttcccttt 32929697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 4215858 - 4215693
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  4215858 ggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaac 4215759  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 172  Q
    || ||    ||||||||||||||||||   |||||| ||| |||||| | | |||||| ||||||||||    
T  4215758 tatta---tataatttcctttttcatactcttaaccagtgccccgggggcaccggttaacatttccctt 4215693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 23402301 - 23402136
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| |||||| |||| ||||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||     
T  23402301 ggggcacgggttaagcataccataaaaggtaattattaccataaaaggaaactgtttttgactttattataaattaatttcacaatttcaatgcattaat 23402202  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccctt 172  Q
    |||||    |||||||||||||||||||| |||||| |||||| ||| | | | |||||||||||||||    
T  23402201 tacta---tataatttcctttttcatatccttaaccagtgccccggaggcaccagttagcatttccctt 23402136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 12145143 - 12145271
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    ||||||||||| ||||  ||||||| ||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12145143 gcactggttaagcatactataaaaggaaattattatcataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactac 12145242  T
Q  108 tactccataatttcctttttcatatcattaac 139  Q
    ||    |||||||||||||||||||| |||||    
T  12145243 ta---tataatttcctttttcatatccttaac 12145271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 2581108 - 2580983
Alignment:
Q  12 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactact 111  Q
    ||||||| |||| ||||||||  ||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||      
T  2581108 tggttaagcataccataaaagggaattattaccataaaaggaaattatttttgactttattataaattaattacataatttcaatgcattaactacta-- 2581011  T
Q  112 ccataatttcctttttcatatcattaacc 140  Q
      |||||||||||||| ||||||||||||    
T  2581010 -tataatttccttttttatatcattaacc 2580983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 7851191 - 7851347
Alignment:
Q  14 gttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactcc 113  Q
    ||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||        
T  7851191 gttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaattttaatgcattaattacta---t 7851287  T
Q  114 ataatttcctttttcatatcattaaccggtgccc-gggagaatcggttagcatttccctt 172  Q
    ||||||| |||||||||||| |||||| |||||| ||| | | |||||||||||||||||    
T  7851288 ataattttctttttcatatccttaaccagtgccctgggggcaccggttagcatttccctt 7851347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 32985216 - 32985348
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  |||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  32985216 ggggcactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattacacaatttcaatacattaac 32985315  T
Q  105 tactactccataatttcctttttcatatcattaacc 140  Q
    |||||    |||||||||||||| ||||| ||||||    
T  32985316 tacta---tataatttccttttttatatccttaacc 32985348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 34851876 - 34852003
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| ||||| |||||||  ||||||||| ||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34851876 cactggttaagcatattataaaagagaattattactataaaaggaaattatttttgactttattataaatcaattacacaatttcaatgcattaactact 34851975  T
Q  109 actccataatttcctttttcatatcattaac 139  Q
    |    |||||||||||||||||||| |||||    
T  34851976 a---tataatttcctttttcatatctttaac 34852003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 170
Target Start/End: Original strand, 21878400 - 21878533
Alignment:
Q  35 aattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatca 134  Q
    ||||||||||||||||  ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||    ||||||||||||||||||||     
T  21878400 aattattaccataaaaagaaactgtttttgactttattataaattaattaaataatttcaatgcattaactacta---tataatttcctttttcatatcc 21878496  T
Q  135 ttaaccggtgcccggga-gaatcggttagcatttccc 170  Q
    |||||| |||||||||| | | |||||||||||||||    
T  21878497 ttaacccgtgcccgggaggcaccggttagcatttccc 21878533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 35044052 - 35043921
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  35044052 ggggcactggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaa-tacacaatttcaatgaattaac 35043954  T
Q  105 tactactccataatttcctttttcatatcattaacc 140  Q
    |||||    |||||||| ||||||||||| ||||||    
T  35043953 tacta---tataatttcttttttcatatccttaacc 35043921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 12525883 - 12525716
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    ||||||||| ||||| |||||||||||||  ||||||||||||||||  ||| ||| |||||| ||||||||||||||||||||| |||||||| |||||    
T  12525883 tggggcactagttaagcatatcataaaagggaattattaccataaaatgaaactgtgtttgacattattataaattaattacacattttcaatgtattaa 12525784  T
Q  104 ctactactccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttcccttt 173  Q
    ||||||    |||||||||||||||||| | |||||| || ||| ||| | | ||||||||||||||||||    
T  12525783 ctacta---tataatttcctttttcatacccttaaccagtaccccggaggcaccggttagcatttcccttt 12525716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 23629619 - 23629761
Alignment:
Q  25 cataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctt 124  Q
    |||||||| ||||||||  |||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    ||||||| |||    
T  23629619 cataaaagaaaattattgtcataaaaggaaattgtttttgactttattataaagtaattacacaatttcaatacattaactacta---tataattttctt 23629715  T
Q  125 tttcatatcattaaccggtgcccgggagaatcggttagcatttccc 170  Q
    ||||||||| |||| | |||||| || | |||||||| ||||||||    
T  23629716 tttcatatccttaatcagtgccccggggcatcggttaacatttccc 23629761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 20898075 - 20897946
Alignment:
Q  41 taccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaacc 140  Q
    ||||||||||| ||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||    |||||||||||||||||||| ||||||    
T  20898075 taccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactacta---tataatttcctttttcatatccttaacc 20897979  T
Q  141 ggtgccc-gggagaatcggttagcatttccctt 172  Q
     |||||| ||| | | |||||||||||||||||    
T  20897978 agtgccctgggggcaccggttagcatttccctt 20897946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 170
Target Start/End: Complemental strand, 29978394 - 29978233
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    |||| |||||||| |||||||||||||  |||||||||||||||| |||| ||||||||||||||||||||||  |||||| ||||||||| |||||| |    
T  29978394 gggcgctggttaagcatatcataaaagggaattattaccataaaattaaactgtttttgactttattataaatatattacataatttcaatacattaaat 29978295  T
Q  106 actactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccc 170  Q
    ||||    |||||||||||||||||||| |||||  ||| ||||  | | |||||||||||||||    
T  29978294 acta---tataatttcctttttcatatccttaactagtgtccggaggcaccggttagcatttccc 29978233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 27433647 - 27433491
Alignment:
Q  13 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactc 112  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| | |||||||| |||| |||||||||||||||||||| ||||||||||||||||       
T  27433647 ggttaaacataccataaaagggaattattaccataaaaggaaactatttttgacattatgataaattaattacacaattttaatgcattaactacta--- 27433551  T
Q  113 cataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 171  Q
     |||||||||||||||||| | |||||| ||| |||||| | | ||||||||||||||||    
T  27433550 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 27433491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 146
Target Start/End: Original strand, 11115120 - 11115256
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||| ||| | |||||||  |||||||||||||||||||||||||||||| ||||||    
T  11115120 ggggcactggttaaacatatcataaaagggaattattaccataaaagaaaactatttttga--ttattataaattaattacacaatttcaatgtattaac 11115217  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcc 146  Q
    || ||    |||||||||||||| ||||| |||||| |||||    
T  11115218 tatta---tataatttccttttttatatccttaaccagtgcc 11115256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 13416983 - 13417116
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgact---ttattataaattaattacacaatttcaatgcatta 102  Q
    ||||||||||||| ||||| |||||||  ||||||||||||||||| ||| |||||||||||   ||||||||||||||||||||||||||||| |||||    
T  13416983 gggcactggttaagcatattataaaagagaattattaccataaaagaaaactgtttttgactttattattataaattaattacacaatttcaatacatta 13417082  T
Q  103 actactactccataatttcctttttcatatcattaac 139  Q
    |||| ||    |||||||||||||||||||| |||||    
T  13417083 actaata---tataatttcctttttcatatccttaac 13417116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 25165437 - 25165568
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||| ||||||| |||||| ||||||  |||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  25165437 gggcattggttaagcatatcgtaaaagagaattattatcataaaagaaaactgtttttgactttattataaattaattacacaatttcaatatattaact 25165536  T
Q  106 actactccataatttcctttttcatatcattaacc 140  Q
    ||||    |||||||| ||||||||||| ||||||    
T  25165537 acta---tataatttcttttttcatatccttaacc 25165568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 34477609 - 34477715
Alignment:
Q  41 taccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaacc 140  Q
    ||||||||||| ||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||    |||||||||||||||||||| ||||||    
T  34477609 taccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactacta---tataatttcctttttcatatccttaacc 34477705  T
Q  141 ggtgcccggg 150  Q
     |||||||||    
T  34477706 agtgcccggg 34477715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 3026036 - 3026196
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    ||||| |||| |||| ||||||||  ||||||||| ||||||| ||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  3026036 cactgattaagcataccataaaagagaattattacgataaaagaaaactgtttttgacattattataaattaattatacaatttcaatgcattaactact 3026135  T
Q  109 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttcccttt 173  Q
         |||||||| ||||||||| | |||||| ||||||||| | | | ||||||||||||||||    
T  3026136 gt---ataatttcatttttcatacccttaaccagtgcccggg-gcaccagttagcatttcccttt 3026196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 57 - 172
Target Start/End: Original strand, 34396602 - 34396715
Alignment:
Q  57 tgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaaccggtg-cccgggagaat 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||| |||||| ||| || ||| | |     
T  34396602 tgtttttgactttattataaattaattacacaatttcaatgcattaactacta---tataatttcctttttcatatccttaacctgtgtcctgggggcac 34396698  T
Q  156 cggttagcatttccctt 172  Q
    |||||||||||||||||    
T  34396699 cggttagcatttccctt 34396715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 28225363 - 28225252
Alignment:
Q  25 cataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctt 124  Q
    ||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    |||| ||||||    
T  28225363 cataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaattacta---tataa-ttcctt 28225268  T
Q  125 tttcatatcattaacc 140  Q
    ||||||||| ||||||    
T  28225267 tttcatatccttaacc 28225252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 961164 - 961051
Alignment:
Q  13 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactc 112  Q
    |||||| |||| ||||||||  |||||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||       
T  961164 ggttaagcataccataaaagagaattattatcataaaaggaaattgtttctgactttattatcaattaattacacaattttaatgcattaactacta--- 961068  T
Q  113 cataatttcctttttca 129  Q
     ||||||||||||||||    
T  961067 tataatttcctttttca 961051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 1840271 - 1840412
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||||||||||| |||||||||||||  |||||||||||| |||| ||| ||||||| |||||||||||||||||||||||||||| ||| |||||| |    
T  1840271 gggcactggttaaacatatcataaaagggaattattaccatgaaaggaaactgtttttaactttattataaattaattacacaattttaatacattaatt 1840370  T
Q  106 actactccataatttcctttttcatatcattaaccggtgcccggg 150  Q
    | ||    |||||||| ||||| ||||| |||||| |||| ||||    
T  1840371 atta---tataatttctttttttatatccttaaccagtgctcggg 1840412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 5323562 - 5323439
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    |||||| |||||  |||| ||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| |||| |    
T  5323562 gggcaccggttacgcataccataaaagggaattattaccataaaaggaaattgtttttgactttattataaattaattacataattttaatgctttaatt 5323463  T
Q  106 actactccataatttcctttttcatat 132  Q
    ||||    |||||||||||||| ||||    
T  5323462 acta---tataatttccttttttatat 5323439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 31280454 - 31280320
Alignment:
Q  35 aattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatca 134  Q
    ||||||||| ||||||| |||  ||||||||| ||||||||||||||||| ||||||||||||||||||||||||    |||||||||||||||||        
T  31280454 aattattactataaaaggaaaccgtttttgacattattataaattaattatacaatttcaatgcattaactacta---tataatttcctttttcattctc 31280358  T
Q  135 ttaaccggtgcc-cgggagaatcggttagcatttccct 171  Q
    |||| | ||||| |||||| | ||||||||||||||||    
T  31280357 ttaatcagtgcctcgggagcaccggttagcatttccct 31280320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 9661150 - 9661011
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    ||||| |||| |||| ||||| ||||||   ||||||||||||||||| ||| || |||| |||||||| ||||||||||| ||||||||||||||||||    
T  9661150 tggggtactgattaaacatattataaaatggaattattaccataaaaggaaactgcttttaactttattttaaattaattatacaatttcaatgcattaa 9661051  T
Q  104 ctactactccataatttcctttttcatatcattaaccggtgcc 146  Q
    ||| ||     ||||||| ||||||||||| ||||| ||||||    
T  9661050 ctatta---tgtaatttcttttttcatatccttaactggtgcc 9661011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 13529554 - 13529479
Alignment:
Q  69 tattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaaccggtgccc 147  Q
    |||||||||||||||||||||||||||||||||||||||||    |||||||||||||||| ||| |||||| ||||||    
T  13529554 tattataaattaattacacaatttcaatgcattaactacta---tataatttcctttttcacatccttaaccagtgccc 13529479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 22021826 - 22021733
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaa-tttcaatgca 99  Q
    ||||||| ||||||||||  | ||||| || ||||| ||||||||| ||||| || |||||||  |||| |||||||||||||| ||||||||||    
T  22021826 gggcactagttaatcatacaaaaaaaggaatttatttccataaaaggaaatt-ttgttgacttatttatgaattaattacacaagtttcaatgca 22021733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 24227434 - 24227506
Alignment:
Q  28 aaaagtaaattattaccataaaagtaaa-ttgtttttgactttattataaattaattacacaatttcaatgcat 100  Q
    ||||| || |||||| |||||||| ||| || ||||||||||| |||||||||||||||| || ||||||||||    
T  24227434 aaaaggaagttattatcataaaagaaaacttttttttgacttt-ttataaattaattacataaattcaatgcat 24227506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 172
Target Start/End: Complemental strand, 23126 - 22959
Alignment:
Q  3 ttggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcatta 102  Q
    |||||||||||||||| |||| ||||||||  |||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  23126 ttggggcactggttaaacataccataaaagagaattattaacataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgtatta 23027  T
Q  103 actactactccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttccctt 172  Q
    | |||||    |||||||||||||||||||| |||||| |||| ||||| | | |||||||||||||||||    
T  23026 attacta---tataatttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttccctt 22959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 5e-43; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 49529291 - 49529431
Alignment:
Q  7 ggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    |||||||||||| |||| |||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  49529291 ggcactggttaaacataccataaaaggaaattattaccataaaaggaaaatgtttttgactttattataaattaattacataatttcaatgcattaacta 49529390  T
Q  107 ctactccataatttcctttttcatatcattaaccggtgccc 147  Q
    ||| |  ||||||| |||||||||||| |||| | ||||||    
T  49529391 ctagtatataattttctttttcatatccttaatcagtgccc 49529431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 173
Target Start/End: Complemental strand, 52520844 - 52520678
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| |||||||   ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  52520844 ggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaac 52520745  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttt 173  Q
    |||||    |||||||||||||||||| | |||||| ||| |||||| | | ||||||||||||||||||    
T  52520744 tacta---tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttcccttt 52520678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 272383 - 272219
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| | |||| |||| ||||||||  ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  272383 ggggcaccgattaagcataccataaaagggaattattaccataaaaggaaactatttttgactttattataaattaattacacaatttcaatgcattaac 272284  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 171  Q
    |||||    |||||||||||||||||||| |||||| ||| |||||| | | ||||||||||||||||    
T  272283 tacta---tataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccct 272219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 49893494 - 49893330
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||||| |||| |||| ||||||||  ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  49893494 ggggcactgattaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatagattaattacacaatttcaatgcattaac 49893395  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 171  Q
    || ||    |||||||||||||||||||| |||||| ||| |||||| | | ||||||||||||||||    
T  49893394 tatta---tataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccct 49893330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 858752 - 858621
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| |||||| |||| |||||||| |||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  858752 ggggcacgggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaac 858653  T
Q  105 tactactccataatttcctttttcatatcattaac 139  Q
    |||||    |||||||||||||||||||| |||||    
T  858652 tacta---tataatttcctttttcatatccttaac 858621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 42964276 - 42964411
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||||||||||||| ||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42964276 cactggttaagcatatcataaaagtgaattattactataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactact 42964375  T
Q  109 actccataatttcctttttcatatcattaaccggtgccc 147  Q
    |    | |||||| ||||||||||| |||||| ||||||    
T  42964376 at---aaaatttcatttttcatatccttaaccagtgccc 42964411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 170
Target Start/End: Complemental strand, 43787034 - 43786871
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| |||||||   ||||||||||||||||| ||| |||||||||  |||||||||||||||||||||||||||||||||||||    
T  43787034 ggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgatattattataaattaattacacaatttcaatgcattaac 43786935  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccc 170  Q
    |||||    |||||||||||||||||| |||||||| |||||| ||| | | |||||||||||||||    
T  43786934 tacta---tataatttcctttttcataccattaaccagtgccccggaggcaccggttagcatttccc 43786871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 46352797 - 46352630
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| |||||| |||| ||||||||  ||||||||||||||||| ||| ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  46352797 ggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaac 46352698  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctttt 174  Q
    ||||     |||||||||||||||||||| |||||| ||| |||||| | | |||||||||||||||||||    
T  46352697 tactgt---ataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccctttt 46352630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 48725434 - 48725295
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||     
T  48725434 ggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaat 48725335  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgccc 147  Q
    |||||    |||||||||||||||||||| |||||| ||||||    
T  48725334 tacta---tataatttcctttttcatatccttaaccagtgccc 48725295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 10617307 - 10617469
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| |||||| |||| ||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10617307 ggggcacgggttaagcataccataaaagggaattattaccataaaaggaaattgtttttgactttattataaattaattacacaattttaatgcattaac 10617406  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccc 170  Q
    |||||    |||||||||||||| ||||| |||| | ||| ||||| | | |||||| ||||||||    
T  10617407 tacta---tataatttccttttttatatccttaatcagtgtccgggggcaccggttaacatttccc 10617469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 170
Target Start/End: Complemental strand, 2505511 - 2505350
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||||||||||| |||| ||||||||  ||||||||||||||||| ||| | |||||||||||||||| |||||||||||||||||||||||| |||||    
T  2505511 gggcactggttaaacataccataaaagggaattattaccataaaaggaaactatttttgactttattatgaattaattacacaatttcaatgcactaact 2505412  T
Q  106 actactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccc 170  Q
    ||||    |||||||||||||||||||| ||||||  || || |||| | |||||||||||||||    
T  2505411 acta---tataatttcctttttcatatctttaaccaatgtccaggagcagcggttagcatttccc 2505350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 4 - 170
Target Start/End: Complemental strand, 39074582 - 39074419
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    ||||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  39074582 tggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttt-gacattattataaattaattacacaatttcaatgcattaa 39074484  T
Q  104 ctactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 170  Q
    ||||||    |||||||||||||||||| | |||||| ||| |||||| | | |||||||||||||||    
T  39074483 ctacta---tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 39074419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 6 - 145
Target Start/End: Original strand, 41553964 - 41554100
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||||| ||||| |||| |||||||   ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41553964 gggcacttgttaagcataccataaaaaataattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaact 41554063  T
Q  106 actactccataatttcctttttcatatcattaaccggtgc 145  Q
    ||||    |||||||||||||||||||| |||||| ||||    
T  41554064 acta---tataatttcctttttcatatccttaaccagtgc 41554100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 38852380 - 38852246
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| |||||| |||| ||||||||| |||||||| |||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  38852380 ggggcacgggttaaacataccataaaagtgaattattatcataaaataaaactgtttttgactttattataaattaattacacaatttcaatgcattaat 38852281  T
Q  105 tactactccataatttcctttttcatatcattaac 139  Q
    |||||||  |||||||| ||||| ||||| |||||    
T  38852280 tactactatataatttcattttttatatccttaac 38852246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 40362603 - 40362768
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||| |||||||||||    
T  40362603 ggggcactggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattatcaattaattacacaattttaatgcattaac 40362702  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccctt 172  Q
    |||||    |||||||| ||||||||||| |||| | |||||| ||| | |  ||||||||||||||||    
T  40362703 tacta---tataatttcttttttcatatccttaatcagtgccccggaggcacgggttagcatttccctt 40362768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 4168338 - 4168183
Alignment:
Q  13 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactc 112  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||       
T  4168338 ggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatacattaactacta--- 4168242  T
Q  113 cataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccc 170  Q
     |||||||||||||| ||||| |||||| || ||| ||| | | |||||||||||||||    
T  4168241 tataatttccttttttatatccttaaccagttccccggaggcaccggttagcatttccc 4168183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 41304166 - 41304004
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||| ||||||| |||| |||||||| |||||||||||||||||| ||| |||||||||||||||||| ||||||||  ||||||||||||||||||     
T  41304166 ggggcattggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgactttattatcaattaatt--acaatttcaatgcattaat 41304069  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccct 171  Q
    |||||    |||||||||||||||||||| ||||||  ||||| ||| | | ||||||||||||||||    
T  41304068 tacta---tataatttcctttttcatatccttaaccactgccccggaggcaccggttagcatttccct 41304004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 6842782 - 6842681
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| |||||| |  ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6842782 ggggcactggttaagcataccataaatgggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaac 6842683  T
Q  105 ta 106  Q
    ||    
T  6842682 ta 6842681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 18014835 - 18014667
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||||| |||| |||| |||||||| ||||||||| |||||||| ||| ||||||| |||||||||||  |||||||||||||||||||||||||||    
T  18014835 ggggcactgattaagcataccataaaaggaaattattatcataaaaggaaactgtttttaactttattatagtttaattacacaatttcaatgcattaac 18014736  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttttg 175  Q
    |||||    ||||||| |||||||||||| |||| | ||| |||||| | | | ||||||||||||||||||    
T  18014735 tacta---tataatttactttttcatatccttaatcagtgccccgggggcaccagttagcatttcccttttg 18014667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 42548255 - 42548128
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    ||||||||||| |||| ||||||||  ||||||||||||||||  ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42548255 gcactggttaagcataccataaaagggaattattaccataaaatgaaattatttttgactttattataaattaattacataatttcaatgcattaactac 42548156  T
Q  108 tactccataatttcctttttcatatcattaa 138  Q
    ||    |||||||| ||||||||||| ||||    
T  42548155 ta---tataatttcttttttcatatctttaa 42548128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 2119563 - 2119456
Alignment:
Q  35 aattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatca 134  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    ||||||||||||||||||||     
T  2119563 aattattac-ataaaaggaaattgtttttgactttattataaattaattactcaatttcaatgcattaactacta---tataatttcctttttcatatct 2119468  T
Q  135 ttaaccggtgcc 146  Q
    |||||| |||||    
T  2119467 ttaaccagtgcc 2119456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 2938063 - 2938195
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||| ||| ||||| |||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  2938063 ggggtactcgttaagcataccataaaagtgaattattaccataaaatgaaattgtttttgactttattataaattaatcacacaatttcagtgcattaac 2938162  T
Q  105 tactactccataatttcctttttcatatcattaacc 140  Q
    |||||    ||||||| |||||| ||||| ||||||    
T  2938163 tacta---tataattttcttttttatatctttaacc 2938195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 52246745 - 52246601
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaa-ttgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| ||||| |||| |||||||| |||||||||| ||||||  ||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  52246745 gggcactagttaagcataccataaaaggaaattattactataaaaaaaaaattgtttttgactttattataaattaattatacaatttcaatgcattaac 52246646  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccgggag 152  Q
     ||||    |||||||| ||||||||||| |||||| |||||| ||||    
T  52246645 aacta---tataatttcatttttcatatccttaaccagtgccccggag 52246601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 20924151 - 20923992
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    ||||||||||  ||| ||||||||  |||||||||| |||||| ||| |||||||||  |||||||||||||||||||||||||||||| ||||||||||    
T  20924151 cactggttaagtataccataaaagagaattattaccttaaaaggaaactgtttttgatattattataaattaattacacaatttcaatgaattaactact 20924052  T
Q  109 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 170  Q
    |    |||||||||||||||||| | |||||| ||| ||||| || | |||||||||||||||    
T  20924051 a---tataatttcctttttcatacccttaaccagtgccccggaagcaccggttagcatttccc 20923992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 33141048 - 33140944
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||| |||| |||| |||||||||||||  ||||||||||||||||| ||| || ||||||||||||||||||||||||| |||||||||||||||||||    
T  33141048 ggggtactgattaagcatatcataaaagggaattattaccataaaagaaaactgcttttgactttattataaattaattatacaatttcaatgcattaac 33140949  T
Q  105 tacta 109  Q
    |||||    
T  33140948 tacta 33140944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 53489847 - 53489986
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||| ||||||| |||| |||||||   |||||||| |||||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||||    
T  53489847 ggggcattggttaagcataccataaaatagaattattatcataaaaggaaactgtttttgacattattataaattaattacacaattttaatgcattaac 53489946  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgccc 147  Q
    |||||    |||||||||||||||||| | |||||| ||||||    
T  53489947 tacta---tataatttcctttttcatacccttaaccagtgccc 53489986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 50395591 - 50395688
Alignment:
Q  10 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||| ||||||||||||||||||  ||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  50395591 actgattaatcatatcataaaagagaattattaccataaaaggaaattgtttt-gactttattatcaattaattacacaatttctatgcattaactact 50395688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 22249028 - 22248908
Alignment:
Q  26 ataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttccttt 125  Q
    |||||||  ||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||| || |||||||||    ||||||||||||    
T  22249028 ataaaagggaattattaccataaaagaaaactgtttttgactttattatcaattaattacacaatttcaatacaataactacta---tataatttccttt 22248932  T
Q  126 ttcatatcattaaccggtgcccgg 149  Q
    |||||||| |||||  ||||||||    
T  22248931 ttcatatccttaactagtgcccgg 22248908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 13160055 - 13159929
Alignment:
Q  10 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    |||| |||| |||| |||||||  ||||||||||| ||| || ||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  13160055 actgattaagcataccataaaaagaaattattaccgtaatagaaaactgtttttgactttattatcaattaattacacaatttcaatgtattaactacta 13159956  T
Q  110 ctccataatttcctttttcatatcattaac 139  Q
        |||||||||||||||||||| |||||    
T  13159955 ---tataatttcctttttcatatccttaac 13159929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 28139469 - 28139340
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    |||||| ||||  ||| ||||||||  ||||||||||||||||| ||  || ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28139469 gcactgtttaagtataccataaaagggaattattaccataaaaggaatctgcttttgactttattataaattaattatacaatttcaatgcattaactac 28139370  T
Q  108 tactccataatttcctttttcatatcattaacc 140  Q
    || |   ||||||| ||||||||||| ||||||    
T  28139369 tatt---taatttcttttttcatatccttaacc 28139340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 43269762 - 43269899
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| |||||| |  ||||||||| ||||||| ||| ||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  43269762 ggggcactggttaagcataccataaaggataattattactataaaaggaaactgtgtttgattttattataaattaattacataatttcaatgcattaac 43269861  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgc 145  Q
    |||||     |||||||| |||||||||| |||||| ||||    
T  43269862 tacta---tgtaatttcccttttcatatccttaaccagtgc 43269899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 7468573 - 7468442
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||||| |||| |||| ||||||||  | |||||| |||||||| ||| || ||||||||||||||||||||||||| |||||||||||||||||||    
T  7468573 ggggcactgattaagcataccataaaaggga-ttattatcataaaagaaaactgcttttgactttattataaattaattatacaatttcaatgcattaac 7468475  T
Q  105 tactactccataatttcctttttcatatcattaacc 140  Q
    |||||    ||||||||||||||||| || ||||||    
T  7468474 tacta---tataatttcctttttcatttccttaacc 7468442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 50359213 - 50359313
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| |||| |||| |||  ||||||||||| ||||| ||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  50359213 cactggttaagcataccatagaagataattattaccacaaaagaaaactgtttttgactttattatatattaattacccaatttcaatgcattaactact 50359312  T
Q  109 a 109  Q
    |    
T  50359313 a 50359313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 50298973 - 50299072
Alignment:
Q  10 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    |||||||||  ||| ||||| ||| |||||||| |||||||  ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  50298973 actggttaagtataccataagagtgaattattatcataaaaagaaactgtttttgactttattataaattaattacacaatttcagtgcattaactacta 50299072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 147
Target Start/End: Complemental strand, 29241770 - 29241661
Alignment:
Q  35 aattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatca 134  Q
    |||||||| |||||||  ||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||    ||||||||| ||||||||||     
T  29241770 aattattatcataaaaagaatctgtttttgactttattataaattaattacataatttcaatgcattaactacta---tataatttccattttcatatcc 29241674  T
Q  135 ttaaccggtgccc 147  Q
    ||||| |||||||    
T  29241673 ttaactggtgccc 29241661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 172
Target Start/End: Original strand, 11308233 - 11308398
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    ||||||| ||||||| |||| |||||||| || ||||||||||||||| ||| | ||||||| |||||||| |||||||||||  |||||||||||||||    
T  11308233 tggggcattggttaagcataccataaaaggaa-ttattaccataaaaggaaactatttttgattttattatcaattaattacattatttcaatgcattaa 11308331  T
Q  104 ctactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 172  Q
    ||| ||    |||||||||||||||| ||| |||| | ||| ||||| |  | |||||||||||||||||    
T  11308332 ctatta---tataatttcctttttcacatccttaatcagtgtcccggaaacaccggttagcatttccctt 11308398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 41993639 - 41993746
Alignment:
Q  1 ctttggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcat 100  Q
    |||| ||| ||| ||||| |||| ||||||||  ||||||||  ||||||| ||| ||||||| |||||||||||||||||||||| |||||||||||||    
T  41993639 ctttagggtactagttaagcataccataaaagagaattattat-ataaaaggaaactgtttttaactttattataaattaattacataatttcaatgcat 41993737  T
Q  101 taactacta 109  Q
    |||||||||    
T  41993738 taactacta 41993746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 31514932 - 31514850
Alignment:
Q  26 ataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    ||||||| |||||||||| ||||||  ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  31514932 ataaaaggaaattattactataaaaa-aaattgtttttgattttattataaattaattacacaattttaatacattaactacta 31514850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 24488514 - 24488428
Alignment:
Q  20 catatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    |||||||||||||  ||||||||||||||||  ||| ||||||||| |||||||| |||||||||||| ||||| ||||||||||||    
T  24488514 catatcataaaagagaattattaccataaaaagaaactgtttttgattttattatcaattaattacactatttccatgcattaacta 24488428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 52552632 - 52552549
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttc 93  Q
    ||||||||||  ||| ||||||||  ||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||    
T  52552632 cactggttaaatataccataaaagagaattattaccataaaag-atactgtttttgactttattataaattaattacacaatttc 52552549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 2362958 - 2362893
Alignment:
Q  41 taccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    ||||||||||| ||| ||||||||| |||||||| |||||||||||| ||||||||||||||||||    
T  2362958 taccataaaagaaaactgtttttgattttattatcaattaattacactatttcaatgcattaacta 2362893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 107
Target Start/End: Complemental strand, 6842642 - 6842604
Alignment:
Q  69 tattataaattaattacacaatttcaatgcattaactac 107  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6842642 tattataaattaattacacaatttcaatgcattaactac 6842604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 52718252 - 52718166
Alignment:
Q  83 tacacaatttcaatgcattaactactactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccctt 172  Q
    |||||||||| |||| |||||||||||    |||||||||||||||||||| |||||| ||| ||||||| | || |||| |||||||||    
T  52718252 tacacaattttaatgtattaactactat---ataatttcctttttcatatccttaaccagtgtccgggagcaccgattagtatttccctt 52718166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 138
Target Start/End: Complemental strand, 53054913 - 53054834
Alignment:
Q  59 tttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaa 138  Q
    |||||| |||||||||| || ||||||||||| ||||||||||||  | ||||  |||||||| || |||||||||||||    
T  53054913 tttttggctttattatagataaattacacaatctcaatgcattaagaattactatataatttcattattcatatcattaa 53054834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 8152250 - 8152308
Alignment:
Q  171 ttttgaaaataacctgaaataatttctcatgattaccatgatcaatctttcaacctttt 229  Q
    ||||||||||||  ||||||| ||||| |||||| ||||||||||| ||||||||||||    
T  8152250 ttttgaaaataagttgaaatactttctaatgattcccatgatcaatatttcaacctttt 8152308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 2391688 - 2391631
Alignment:
Q  87 caatttcaatgcattaactactactccataatttcctttttcatatcattaaccggtgccc 147  Q
    |||||||||||||||||||||||    ||||||||||||||| |||| |||||| ||||||    
T  2391688 caatttcaatgcattaactacta---tataatttcctttttcttatccttaaccagtgccc 2391631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 2393449 - 2393392
Alignment:
Q  87 caatttcaatgcattaactactactccataatttcctttttcatatcattaaccggtgccc 147  Q
    |||||||||||||||||||||||    ||||||||||||||| |||| |||||| ||||||    
T  2393449 caatttcaatgcattaactacta---tataatttcctttttcttatccttaaccagtgccc 2393392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 21010133 - 21010056
Alignment:
Q  28 aaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    ||||| || ||||||||||||||  ||| | ||||||||||| |||||||||||||| ||||||||||||  ||||||||||    
T  21010133 aaaaggaagttattaccataaaaagaaact-tttttgacttt-ttataaattaattatacaatttcaatg--ttaactacta 21010056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 2362858 - 2362801
Alignment:
Q  114 ataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttccc 170  Q
    |||||||||||||||||||| ||||||  ||| ||||||| | |||||||||||||||    
T  2362858 ataatttcctttttcatatccttaaccattgcaccgggagcaccggttagcatttccc 2362801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 6842674 - 6842641
Alignment:
Q  73 ataaattaattacacaatttcaatgcattaacta 106  Q
    ||||||||||||||||||||||||| ||||||||    
T  6842674 ataaattaattacacaatttcaatgaattaacta 6842641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 170
Target Start/End: Complemental strand, 15059 - 14896
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||| |||||||||    
T  15059 ggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaactacacaatttcagtgcattaac 14960  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgcccgggaga-atcggttagcatttccc 170  Q
    |||||    |||||||| ||||| ||||| |||||| |||||| || || | |||||||||||||||    
T  14959 tacta---tataatttctttttttatatctttaaccagtgccccggggacaccggttagcatttccc 14896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 987 - 857
Alignment:
Q  6 gggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaact 105  Q
    ||||||||||||| |||| ||||||||  ||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  987 gggcactggttaagcataccataaaagagaattattactataaaaggaaattgattttgactttattataaattaattacacaatttcaatgcattaact 888  T
Q  106 actactccataatttcctttttcatatcattaac 139  Q
    ||||    ||||||| |||||||||||| |||||    
T  887 acta---tataattttctttttcatatccttaac 857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 172
Target Start/End: Complemental strand, 116368 - 116202
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    |||||||| |||||| |||| ||||||||  |||||||| |||||||| ||| ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  116368 tggggcacgggttaaacataccataaaagggaattattatcataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaa 116269  T
Q  104 ctactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 172  Q
    ||||||    |||||||||||||||||||| |||||| ||| |||||| | | |||||||||||| ||||    
T  116268 ctacta---tataatttcctttttcatatctttaacctgtgccccgggggcaccggttagcattttcctt 116202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 10871 - 10771
Alignment:
Q  7 ggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    |||||||||||| |||| |||||| |  ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10871 ggcactggttaagcataccataaatgggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaacta 10772  T
Q  107 c 107  Q
    |    
T  10771 c 10771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 6133 - 6272
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    ||||||| |||||| |||| ||||||||   |||||||||||||||| ||| |||||||||||||||||||| |||||||||||||| ||||||||||||    
T  6133 ggggcacgggttaaacataccataaaaggggattattaccataaaaggaaactgtttttgactttattataatttaattacacaattccaatgcattaac 6232  T
Q  105 tactactccataatttcctttttcatatcattaaccggtgccc 147  Q
    |||||    ||| |||||||||||||||| |||||| ||||||    
T  6233 tacta---tatagtttcctttttcatatccttaaccagtgccc 6272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 171
Target Start/End: Complemental strand, 450 - 292
Alignment:
Q  10 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    |||| ||||||||||||||||||  |||||||||| || ||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  450 actgattaatcatatcataaaagagaattattaccgtagaaggaaactgtttttgactttattataaatttattacacaatttcaatgcattaactatta 351  T
Q  110 ctccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccct 171  Q
        ||||||| |||||||||||  |||||| |||||| || | | ||||||| ||||||||    
T  350 ---tataattttctttttcatatgcttaaccagtgccctggggcaccggttaggatttccct 292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 41078 - 40945
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 108  Q
    |||||||||| ||||||||||||| ||||||||| |||||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||||||| |    
T  41078 cactggttaagcatatcataaaaggaaattattatcataaaaggaaactgtttttgacttcattataaattaattacataatttcaatgcattaactatt 40979  T
Q  109 actccataatttcctttttcatatcattaaccggtgc 145  Q
    |    |||||||| ||||||||||  |||| ||||||    
T  40978 a---tataatttcatttttcatattcttaatcggtgc 40945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 50708 - 50567
Alignment:
Q  8 gcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactac 107  Q
    ||||||||||| ||||  |||||||  |||||||| |||||||| |||||| ||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  50708 gcactggttaaacatactataaaagagaattattatcataaaagaaaattgattttgactttattataaattaattatacaatttcaaaacattaactac 50609  T
Q  108 tactccataatttcctttttcatatcattaaccggtgcccgggag 152  Q
    ||    |||||||||||||||||||| |||||| |||||| ||||    
T  50608 ta---tataatttcctttttcatatctttaaccagtgccccggag 50567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 52 - 161
Target Start/End: Original strand, 53416 - 53522
Alignment:
Q  52 taaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaaccggtgcccggga 151  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    |||||||||||||| ||||| |||||| ||| | ||||    
T  53416 taaattgtttttgactttattataaattaattatacaatttcaatgcattaactacta---tataatttccttttttatatccttaaccagtgtctggga 53512  T
Q  152 gaatcggtta 161  Q
    | | ||||||    
T  53513 gcaacggtta 53522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 832 - 704
Alignment:
Q  14 gttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactcc 113  Q
    ||||| |||| ||||||||  |||||| |||||||||| |||  |||||||||||||||||||||||||||||||||||||||| |||||||||||        
T  832 gttaagcataccataaaagagaattatcaccataaaagaaaacagtttttgactttattataaattaattacacaatttcaatggattaactacta---t 736  T
Q  114 ataatttcctttttcatatcattaaccggtgc 145  Q
    |||||||||||||||||||| |||||| ||||    
T  735 ataatttcctttttcatatctttaacccgtgc 704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 53716 - 53872
Alignment:
Q  13 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactc 112  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| | |||||||| |||| |||||||||||||||||||| ||||||||||||||||       
T  53716 ggttaaacataccataaaagggaattattaccataaaaggaaactatttttgacattatgataaattaattacacaattttaatgcattaactacta--- 53812  T
Q  113 cataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 171  Q
     |||||||||||||||||| | |||||| ||| |||||| | | ||||||||||||||||    
T  53813 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 53872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 7956 - 8062
Alignment:
Q  41 taccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaacc 140  Q
    ||||||||||| ||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||    |||||||||||||||||||| ||||||    
T  7956 taccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactacta---tataatttcctttttcatatccttaacc 8052  T
Q  141 ggtgcccggg 150  Q
     |||||||||    
T  8053 agtgcccggg 8062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 7415 - 7309
Alignment:
Q  41 taccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaacc 140  Q
    ||||||||||| ||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||    |||||||||||||||||||| ||||||    
T  7415 taccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactacta---tataatttcctttttcatatccttaacc 7319  T
Q  141 ggtgcccggg 150  Q
     |||||||||    
T  7318 agtgcccggg 7309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 25861 - 25750
Alignment:
Q  25 cataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctt 124  Q
    ||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    |||| ||||||    
T  25861 cataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaattacta---tataa-ttcctt 25766  T
Q  125 tttcatatcattaacc 140  Q
    ||||||||| ||||||    
T  25765 tttcatatccttaacc 25750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 146933 - 147059
Alignment:
Q  10 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta 109  Q
    |||| |||| |||| |||||||  ||||||||||| ||| || ||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  146933 actgattaagcataccataaaaagaaattattaccgtaatagaaaactgtttttgactttattatcaattaattacacaatttcaatgtattaactacta 147032  T
Q  110 ctccataatttcctttttcatatcattaac 139  Q
        |||||||||||||||||||| |||||    
T  147033 ---tataatttcctttttcatatccttaac 147059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 68313 - 68478
Alignment:
Q  5 ggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaac 104  Q
    |||| ||||||||| |||| ||||||||  |||||||||| |||||| ||| || |||| |||||||||||| ||| ||||||||||| |||||||||||    
T  68313 ggggtactggttaagcataccataaaagggaattattaccttaaaaggaaactgattttaactttattataatttatttacacaattttaatgcattaac 68412  T
Q  105 tactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 172  Q
    |||||    |||||||| ||||||||||| |||||| ||| |||||| | | | |||||||||||||||    
T  68413 tacta---tataatttcatttttcatatccttaaccagtgccccgggggcaccagttagcatttccctt 68478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 149
Target Start/End: Complemental strand, 69386 - 69248
Alignment:
Q  7 ggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    |||||||||||| |||| |||||||| ||||||||||| |||||  ||| || ||||||||||||||||||||||||||| ||||| |||| ||||||||    
T  69386 ggcactggttaagcataccataaaag-aaattattaccttaaaaaaaaactgcttttgactttattataaattaattacataattttaatgtattaacta 69288  T
Q  107 ctactccataatttcctttttcatatcattaaccggtgcccgg 149  Q
    |||    ||||||| |||||||||||| |||||  ||||||||    
T  69287 cta---tataatttactttttcatatccttaacgagtgcccgg 69248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 106
Target Start/End: Original strand, 33709 - 33805
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaacta 106  Q
    |||| ||||| ||||||| || || ||||||||| |||||||| ||| | ||||| |  || ||||||||||||||||||||||||||| ||||||||    
T  33709 cactagttaagcatatcaaaagagaaaattattagcataaaagaaaactattttttatctt-ttataaattaattacacaatttcaatgtattaacta 33805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 17493 - 17658
Alignment:
Q  4 tggggcactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    |||| ||| |||||| |||| |||||||   |||||||| |||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||     
T  17493 tgggacaccggttaaacataccataaaaaggaattattatcataaaagaaaactgtttttgactttattataaattaatt-cacaatttcaatgcattag 17591  T
Q  104 ctactactccataatttcctttttcatatcattaaccggtgcc-cgggagaatcggttagcatttccctttt 174  Q
    ||||||    ||||||| ||||||||||||  ||| | ||||| ||||| |  |||||||||||||||||||    
T  17592 ctacta---tataattttctttttcatatccgtaaacagtgcctcgggaca--cggttagcatttccctttt 17658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 19612 - 19706
Alignment:
Q  9 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    ||||| ||||||||||||||||||  || ||||| | |||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  19612 cactgattaatcatatcataaaagagaactattatcgtaaaaggaaactgtttttgactttattataaattcattacacaatttcaatgcattaa 19706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 11029 - 11155
Alignment:
Q  41 taccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactccataatttcctttttcatatcattaacc 140  Q
    ||||||||||  ||| |||||||||||||||||||  ||||||||||||||||||||||||||||| ||    |||||||||||||||||||| ||||||    
T  11029 taccataaaatgaaactgtttttgactttattatagtttaattacacaatttcaatgcattaactaata---tataatttcctttttcatatccttaacc 11125  T
Q  141 ggtgcccgggagaatcggttagcatttccct 171  Q
     ||| ||||| | | | ||||||||||||||    
T  11126 agtgtccggg-gcaccagttagcatttccct 11155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 95616 - 95772
Alignment:
Q  13 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactactc 112  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||||||||| |||||| || ||       
T  95616 ggttaaacataccataaaagggaattattaccataaaagaaaactgtttt-gactttattataaattaattacataatttcaattcattaattatta--- 95711  T
Q  113 cataatttcctttttcatatcattaaccggtgcc-cgggagaatcggttagcatttccctt 172  Q
     |||||||||||||||||||  |||||| || || |||| | | |||||||||||| ||||    
T  95712 tataatttcctttttcatattcttaaccagtacctcgggggcaccggttagcattttcctt 95772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 234008 - 233918
Alignment:
Q  13 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    |||||| |||| |||||||| ||||||||  |||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||    
T  234008 ggttaaacataccataaaaggaaattattttcataaaaggaaactgcttttgactttattataaattaattacacaatttcaatgaattaa 233918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 74526 - 74594
Alignment:
Q  35 aattattaccataaaagtaaattgtttttgactttattataaattaattacacaatttcaatgcattaa 103  Q
    ||||||||||||||||| || |||||||| | |||||||| ||||||||| ||||||||| | ||||||    
T  74526 aattattaccataaaagaaatttgttttttaatttattatcaattaattatacaatttcactacattaa 74594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 109
Target Start/End: Complemental strand, 5136 - 5098
Alignment:
Q  71 ttataaattaattacacaatttcaatgcattaactacta 109  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  5136 ttataaattaattacacaatttcaataaattaactacta 5098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University