View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13043_low_13 (Length: 277)
Name: NF13043_low_13
Description: NF13043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13043_low_13 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 9796628 - 9796904
Alignment:
| Q |
1 |
caaaaaatttagaagaaaaataaatgttcaaataagtatttcaacaaccacaggagacaaagaagccattttcaaagaaatcccactagaagaccctaca |
100 |
Q |
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| T |
9796628 |
caaaaaatttagaagaaaaataaatgttcaaataagtatttcaacaaccacaggagacaaagaagccattttcaaagaaatcccactagaagaccctaca |
9796727 |
T |
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| Q |
101 |
gcaagaaacagctatgcaaaacatggtttgcacgtgatccaagaacgtgagtgacatcatgtcatatatttatttaatgtagttatatatcagaagatgt |
200 |
Q |
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| T |
9796728 |
gcaagaaacagctatgcaaaacatggtttgcacgtgatccaagaacgtgagtgacatcatgtcatatatttatttaatgtagttatatatcagaagatgt |
9796827 |
T |
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| Q |
201 |
tttttgcatgtgacaaatattgaaaaatgtgtaggtagttgtttgggttaggagatattgatgaaaacacatgatga |
277 |
Q |
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| T |
9796828 |
tttttgcatgtgacaaatattgaaaaatgtgtaggtagttgtttgggttaggagatattgatgaaaacacatgatga |
9796904 |
T |
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