View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13044_high_29 (Length: 328)

Name: NF13044_high_29
Description: NF13044
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13044_high_29
NF13044_high_29
[»] scaffold0058 (3 HSPs)
scaffold0058 (9-107)||(3343-3441)
scaffold0058 (9-107)||(4515-4613)
scaffold0058 (67-109)||(14343-14385)
[»] chr3 (51 HSPs)
chr3 (9-106)||(3152215-3152312)
chr3 (9-109)||(2660259-2660359)
chr3 (9-106)||(44794257-44794354)
chr3 (9-109)||(19987591-19987691)
chr3 (12-109)||(53190759-53190856)
chr3 (9-109)||(21348770-21348870)
chr3 (12-108)||(41977798-41977894)
chr3 (9-107)||(30599915-30600013)
chr3 (30-109)||(35905730-35905809)
chr3 (12-109)||(2226152-2226249)
chr3 (12-109)||(27899081-27899178)
chr3 (9-106)||(51684660-51684757)
chr3 (9-101)||(42279562-42279654)
chr3 (30-109)||(54898484-54898563)
chr3 (9-102)||(23293167-23293260)
chr3 (12-109)||(2377076-2377173)
chr3 (31-103)||(17515363-17515435)
chr3 (9-101)||(43765192-43765284)
chr3 (67-109)||(3150299-3150341)
chr3 (67-109)||(38191942-38191984)
chr3 (67-109)||(38193510-38193552)
chr3 (67-109)||(41979352-41979394)
chr3 (12-102)||(46112541-46112631)
chr3 (67-109)||(46308854-46308896)
chr3 (67-109)||(46310436-46310478)
chr3 (67-109)||(46611303-46611345)
chr3 (67-109)||(53094273-53094315)
chr3 (67-109)||(53187789-53187831)
chr3 (9-102)||(48830803-48830896)
chr3 (36-92)||(23876982-23877038)
chr3 (36-100)||(25535253-25535317)
chr3 (9-81)||(44276193-44276265)
chr3 (9-109)||(46197767-46197867)
chr3 (50-109)||(23774199-23774258)
chr3 (12-78)||(7884873-7884939)
chr3 (67-109)||(46609196-46609238)
chr3 (67-109)||(53092670-53092712)
chr3 (67-109)||(54900074-54900116)
chr3 (36-109)||(48633924-48633997)
chr3 (67-106)||(35903875-35903914)
chr3 (36-107)||(45898352-45898423)
chr3 (67-109)||(2661908-2661950)
chr3 (36-106)||(33113184-33113254)
chr3 (67-109)||(44795890-44795932)
chr3 (36-109)||(23888776-23888849)
chr3 (36-109)||(40508915-40508988)
chr3 (36-100)||(1845840-1845904)
chr3 (37-109)||(28626458-28626530)
chr3 (67-109)||(7883375-7883417)
chr3 (67-109)||(23291617-23291659)
chr3 (36-100)||(31887456-31887520)
[»] chr8 (48 HSPs)
chr8 (9-109)||(27691201-27691301)
chr8 (214-311)||(395254-395350)
chr8 (9-109)||(33708801-33708901)
chr8 (30-108)||(13108354-13108432)
chr8 (9-109)||(41825641-41825741)
chr8 (12-109)||(8609787-8609884)
chr8 (9-109)||(13282525-13282625)
chr8 (12-108)||(38547276-38547372)
chr8 (9-107)||(15305846-15305944)
chr8 (9-107)||(15486215-15486313)
chr8 (9-109)||(9673162-9673262)
chr8 (9-107)||(41042581-41042679)
chr8 (9-109)||(13486096-13486196)
chr8 (9-109)||(22272383-22272483)
chr8 (9-109)||(26242311-26242411)
chr8 (9-109)||(27406894-27406994)
chr8 (31-109)||(42941821-42941899)
chr8 (9-109)||(7745109-7745209)
chr8 (67-109)||(33761116-33761158)
chr8 (67-109)||(35509261-35509303)
chr8 (36-109)||(5036492-5036565)
chr8 (37-109)||(601674-601746)
chr8 (67-106)||(13106854-13106893)
chr8 (22-93)||(40020625-40020696)
chr8 (67-109)||(27692837-27692879)
chr8 (67-109)||(29237198-29237240)
chr8 (67-109)||(33707253-33707295)
chr8 (67-109)||(33762713-33762755)
chr8 (67-109)||(38548831-38548873)
chr8 (9-103)||(40339677-40339771)
chr8 (36-93)||(11788384-11788441)
chr8 (28-109)||(28433712-28433793)
chr8 (36-109)||(31821465-31821538)
chr8 (67-107)||(13283995-13284035)
chr8 (36-100)||(37526027-37526091)
chr8 (67-109)||(8608284-8608327)
chr8 (36-94)||(9184445-9184503)
chr8 (67-109)||(15308261-15308303)
chr8 (67-109)||(15488630-15488672)
chr8 (67-109)||(29239187-29239229)
chr8 (67-109)||(35510819-35510861)
chr8 (67-109)||(42943426-42943468)
chr8 (36-109)||(33750388-33750461)
chr8 (36-109)||(42897778-42897851)
chr8 (37-109)||(31201148-31201220)
chr8 (37-110)||(9186617-9186690)
chr8 (54-106)||(1320667-1320719)
chr8 (37-109)||(26238773-26238845)
[»] chr1 (45 HSPs)
chr1 (9-107)||(46583533-46583631)
chr1 (12-108)||(4855946-4856042)
chr1 (9-109)||(33602621-33602721)
chr1 (9-109)||(9121645-9121745)
chr1 (12-108)||(34778118-34778214)
chr1 (9-109)||(47013059-47013159)
chr1 (9-107)||(51896129-51896227)
chr1 (9-109)||(2869626-2869726)
chr1 (9-109)||(15104488-15104588)
chr1 (12-107)||(31238475-31238570)
chr1 (9-107)||(27087332-27087430)
chr1 (12-109)||(6818658-6818755)
chr1 (12-109)||(25278348-25278445)
chr1 (13-109)||(50556078-50556174)
chr1 (12-109)||(37344389-37344486)
chr1 (54-109)||(3013498-3013553)
chr1 (67-109)||(26223634-26223676)
chr1 (67-109)||(46582057-46582099)
chr1 (9-78)||(1442599-1442668)
chr1 (37-109)||(9120086-9120158)
chr1 (22-93)||(5783427-5783498)
chr1 (54-109)||(25278975-25279030)
chr1 (67-106)||(37345962-37346001)
chr1 (67-109)||(4854457-4854499)
chr1 (67-109)||(34776616-34776658)
chr1 (36-106)||(42134532-42134602)
chr1 (22-100)||(51121961-51122039)
chr1 (69-109)||(8167989-8168029)
chr1 (50-106)||(18183961-18184017)
chr1 (67-102)||(25276796-25276831)
chr1 (50-109)||(36895528-36895587)
chr1 (37-107)||(1444151-1444221)
chr1 (67-109)||(8169568-8169610)
chr1 (67-109)||(47011503-47011545)
chr1 (37-109)||(27940655-27940727)
chr1 (65-109)||(52643648-52643692)
chr1 (67-109)||(27089279-27089321)
chr1 (67-109)||(33599265-33599307)
chr1 (36-106)||(46638811-46638881)
chr1 (111-144)||(6818780-6818813)
chr1 (36-109)||(31801680-31801753)
chr1 (36-93)||(42559916-42559973)
chr1 (111-147)||(27089346-27089382)
chr1 (67-107)||(31236868-31236908)
chr1 (50-106)||(45381002-45381058)
[»] chr5 (36 HSPs)
chr5 (9-109)||(24541188-24541289)
chr5 (9-109)||(2854304-2854403)
chr5 (9-109)||(29621758-29621858)
chr5 (9-109)||(36057590-36057690)
chr5 (9-109)||(40780597-40780697)
chr5 (12-109)||(17574365-17574462)
chr5 (9-109)||(34327682-34327782)
chr5 (9-109)||(42473584-42473684)
chr5 (12-109)||(7267890-7267987)
chr5 (9-109)||(18624985-18625085)
chr5 (12-109)||(30468260-30468357)
chr5 (30-109)||(2179834-2179913)
chr5 (37-100)||(27075876-27075939)
chr5 (67-109)||(7269446-7269488)
chr5 (36-109)||(18728606-18728679)
chr5 (36-109)||(32087561-32087634)
chr5 (50-102)||(8539729-8539781)
chr5 (37-109)||(40782181-40782253)
chr5 (67-109)||(2852933-2852975)
chr5 (67-107)||(21842992-21843032)
chr5 (37-109)||(29620185-29620257)
chr5 (50-109)||(38596915-38596974)
chr5 (67-109)||(30463947-30463989)
chr5 (36-106)||(43318064-43318134)
chr5 (36-109)||(35395380-35395453)
chr5 (65-106)||(43492131-43492172)
chr5 (67-109)||(8541271-8541313)
chr5 (67-109)||(12738736-12738778)
chr5 (67-109)||(12801559-12801601)
chr5 (67-109)||(28813765-28813807)
chr5 (54-100)||(35292404-35292450)
chr5 (39-92)||(9221684-9221737)
chr5 (36-109)||(19997165-19997238)
chr5 (22-107)||(24496792-24496877)
chr5 (50-106)||(38178111-38178167)
chr5 (50-106)||(38205335-38205391)
[»] chr7 (43 HSPs)
chr7 (9-109)||(27666042-27666142)
chr7 (12-107)||(29996494-29996589)
chr7 (9-109)||(56377-56477)
chr7 (9-109)||(20478089-20478189)
chr7 (12-106)||(6602385-6602479)
chr7 (31-104)||(34776914-34776987)
chr7 (9-109)||(24228386-24228486)
chr7 (9-135)||(35693347-35693467)
chr7 (9-109)||(37115503-37115603)
chr7 (12-107)||(39859209-39859304)
chr7 (9-109)||(38474120-38474220)
chr7 (12-108)||(45359384-45359480)
chr7 (36-92)||(366762-366818)
chr7 (36-100)||(37796185-37796249)
chr7 (22-109)||(45463717-45463804)
chr7 (12-109)||(13168167-13168267)
chr7 (36-106)||(33038801-33038871)
chr7 (67-109)||(35402016-35402058)
chr7 (67-109)||(35403619-35403661)
chr7 (22-91)||(48303639-48303708)
chr7 (37-109)||(20479689-20479761)
chr7 (9-109)||(30940402-30940502)
chr7 (9-109)||(47386186-47386286)
chr7 (9-100)||(48852324-48852415)
chr7 (47-93)||(7401956-7402002)
chr7 (36-109)||(46996706-46996779)
chr7 (67-107)||(27664479-27664519)
chr7 (22-93)||(4322562-4322633)
chr7 (67-109)||(78014-78056)
chr7 (36-106)||(2167529-2167599)
chr7 (36-110)||(11682827-11682901)
chr7 (20-85)||(23906249-23906314)
chr7 (22-91)||(34691060-34691129)
chr7 (33-106)||(38614913-38614985)
chr7 (67-107)||(13169683-13169723)
chr7 (37-109)||(35344295-35344367)
chr7 (54-106)||(38613503-38613555)
chr7 (22-100)||(1546343-1546421)
chr7 (37-107)||(8423286-8423356)
chr7 (67-109)||(39857692-39857734)
chr7 (67-109)||(47384341-47384383)
chr7 (36-109)||(23953852-23953925)
chr7 (58-106)||(47341712-47341760)
[»] chr4 (42 HSPs)
chr4 (9-109)||(43519471-43519571)
chr4 (12-102)||(51011980-51012070)
chr4 (9-109)||(41761723-41761823)
chr4 (9-109)||(49523171-49523271)
chr4 (9-107)||(42980684-42980782)
chr4 (9-107)||(41781588-41781686)
chr4 (22-109)||(39083686-39083773)
chr4 (67-109)||(4173740-4173782)
chr4 (67-109)||(43507214-43507256)
chr4 (67-109)||(43508653-43508695)
chr4 (20-93)||(39189445-39189518)
chr4 (9-106)||(48813837-48813934)
chr4 (9-109)||(48646724-48646824)
chr4 (22-93)||(5484603-5484674)
chr4 (22-93)||(39921557-39921628)
chr4 (22-93)||(43779857-43779928)
chr4 (67-109)||(319320-319362)
chr4 (67-109)||(4169733-4169775)
chr4 (67-109)||(33266010-33266052)
chr4 (12-109)||(35404425-35404522)
chr4 (40-100)||(11601727-11601786)
chr4 (50-106)||(44558511-44558567)
chr4 (37-109)||(44794765-44794837)
chr4 (22-93)||(32652162-32652233)
chr4 (67-102)||(43521109-43521144)
chr4 (22-93)||(44994277-44994348)
chr4 (37-107)||(835012-835082)
chr4 (50-100)||(27624862-27624912)
chr4 (67-109)||(33264429-33264471)
chr4 (67-109)||(51013886-51013928)
chr4 (36-109)||(35996110-35996183)
chr4 (37-109)||(833270-833342)
chr4 (36-108)||(2827452-2827524)
chr4 (37-109)||(5437858-5437930)
chr4 (37-109)||(5439617-5439689)
chr4 (37-109)||(47941858-47941930)
chr4 (67-110)||(230482-230525)
chr4 (22-93)||(13450970-13451041)
chr4 (37-107)||(10372711-10372781)
chr4 (67-109)||(39345611-39345653)
chr4 (70-102)||(320903-320935)
chr4 (41-93)||(42880764-42880816)
[»] chr6 (24 HSPs)
chr6 (9-109)||(13613559-13613659)
chr6 (12-109)||(32439071-32439168)
chr6 (11-109)||(3456795-3456893)
chr6 (9-109)||(20523413-20523513)
chr6 (9-109)||(32455868-32455968)
chr6 (9-109)||(7372935-7373035)
chr6 (9-103)||(9398713-9398807)
chr6 (9-109)||(10568446-10568546)
chr6 (9-85)||(7049828-7049904)
chr6 (25-93)||(35175856-35175924)
chr6 (50-109)||(3018450-3018509)
chr6 (22-93)||(17952032-17952103)
chr6 (67-106)||(32518497-32518536)
chr6 (12-109)||(32516924-32517021)
chr6 (37-109)||(3480627-3480699)
chr6 (9-109)||(6899532-6899632)
chr6 (37-109)||(32454295-32454367)
chr6 (50-109)||(2968186-2968245)
chr6 (37-100)||(14338480-14338543)
chr6 (67-109)||(18645104-18645146)
chr6 (75-107)||(13610739-13610771)
chr6 (30-109)||(11355269-11355348)
chr6 (37-109)||(4641402-4641474)
chr6 (22-62)||(34343929-34343969)
[»] chr2 (37 HSPs)
chr2 (9-109)||(40560270-40560370)
chr2 (9-109)||(6785978-6786078)
chr2 (9-107)||(37020557-37020655)
chr2 (22-109)||(16763123-16763210)
chr2 (31-109)||(24208061-24208139)
chr2 (9-109)||(39664745-39664845)
chr2 (9-109)||(2766981-2767081)
chr2 (9-109)||(14389081-14389181)
chr2 (12-107)||(19908246-19908341)
chr2 (30-105)||(44709763-44709838)
chr2 (9-109)||(6797554-6797654)
chr2 (12-107)||(16377197-16377292)
chr2 (9-98)||(42519202-42519291)
chr2 (67-109)||(16764611-16764653)
chr2 (9-106)||(17696256-17696353)
chr2 (37-109)||(24205645-24205717)
chr2 (37-109)||(37022155-37022227)
chr2 (22-93)||(38148559-38148630)
chr2 (37-104)||(39455221-39455288)
chr2 (67-109)||(14387396-14387438)
chr2 (36-109)||(26584821-26584894)
chr2 (37-109)||(2577450-2577522)
chr2 (50-106)||(37417323-37417379)
chr2 (22-93)||(11023003-11023074)
chr2 (36-107)||(29909664-29909735)
chr2 (39-92)||(4046360-4046413)
chr2 (36-93)||(11315339-11315396)
chr2 (50-106)||(15432378-15432434)
chr2 (22-110)||(17946140-17946228)
chr2 (22-93)||(28246726-28246797)
chr2 (50-100)||(39415-39465)
chr2 (12-106)||(361495-361589)
chr2 (67-109)||(6783411-6783453)
chr2 (22-100)||(7744099-7744177)
chr2 (67-109)||(40561878-40561920)
chr2 (37-105)||(15372550-15372618)
chr2 (37-109)||(41706586-41706658)
[»] scaffold1454 (1 HSPs)
scaffold1454 (12-109)||(1310-1407)
[»] scaffold0081 (1 HSPs)
scaffold0081 (37-109)||(54228-54300)
[»] scaffold1712 (1 HSPs)
scaffold1712 (37-109)||(1029-1101)
[»] scaffold0477 (1 HSPs)
scaffold0477 (37-109)||(6639-6711)


Alignment Details
Target: scaffold0058 (Bit Score: 91; Significance: 4e-44; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 3441 - 3343
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3441 acatcatcactattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 3343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 4613 - 4515
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4613 acatcatcactattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 4515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 14343 - 14385
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14343 aaattcagggactaatttgatatttcgcaaaattcagggacga 14385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 4e-41; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 106
Target Start/End: Original strand, 3152215 - 3152312
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3152215 acatcatcactattaacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 3152312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 2660359 - 2660259
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2660359 acatcatcgttattaacagaccttttggacggagggacgaatttgatggacgtctgtaaaattcaaggactaatttgatatttcgcaaaattcagggacg 2660260  T
Q  109 a 109  Q
    |    
T  2660259 a 2660259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 44794354 - 44794257
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  44794354 acatcatcactattaacggaccttttggacggagggacgaatttgatggacttctgcaaaattcagggactaatttgatatttcgcaaaattcaggga 44794257  T

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Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 19987591 - 19987691
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  19987591 acatcatcactactaacagaccttttggacggagggactgatttgatggacgtgtgtaaaatttagggactaatttgatatttcgcaaaattcagggacg 19987690  T
Q  109 a 109  Q
    |    
T  19987691 a 19987691  T

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Target: chr3; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 53190759 - 53190856
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| | |||| || ||||| ||||||||||| | |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  53190759 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacga 53190856  T

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Target: chr3; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 21348870 - 21348770
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||| ||||| | ||||||| ||||| ||||||||||| | |||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  21348870 acattatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 21348771  T
Q  109 a 109  Q
    |    
T  21348770 a 21348770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 41977894 - 41977798
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||| ||||||  | ||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41977894 tcatcaccattaacgaagcttttggacggagggaccattttgacggacgtctgtaaaattcagggactaatttgatatttcgccaaattcagggacg 41977798  T

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Target: chr3; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 30599915 - 30600013
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    |||||||||| | ||||||| ||||| ||||||||||| | |||||| ||||||| ||||||||||||||||| | |||||||||||||||||||||||    
T  30599915 acatcatcaccactaacagagcttttggacggagggaccattttgatcgacgtctctaaaattcagggactaaatagatatttcgcaaaattcagggac 30600013  T

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Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 35905730 - 35905809
Alignment:
Q  30 cttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||| ||||||||||| | ||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  35905730 cttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacga 35905809  T

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Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 2226152 - 2226249
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| | |||||||  |||| ||||||||||  | ||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  2226152 tcatcaccactaacagagtttttggacggagggaacattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacga 2226249  T

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Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 27899081 - 27899178
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| | |||| || ||||| ||||||||||| | ||| |||||||||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  27899081 tcatcaccactaacggagcttttggacggagggaccatttttatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacga 27899178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 51684757 - 51684660
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||| | |||| || ||||| ||||||||||| | |||||||||||||||||||||||| ||||||| | ||||||| ||||||||||||||    
T  51684757 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatattttgcaaaattcaggga 51684660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 42279654 - 42279562
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattc 101  Q
    |||||||||| | ||||||| ||||| ||||||||||| | |||||| ||||||||||||||||||||||||| | ||||||| |||||||||    
T  42279654 acatcatcaccactaacagagcttttggacggagggaccattttgatagacgtctgtaaaattcagggactaaatagatattttgcaaaattc 42279562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 54898563 - 54898484
Alignment:
Q  30 cttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||| ||||||| ||| | ||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  54898563 cttttggacggagagaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacga 54898484  T

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Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 23293167 - 23293260
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattca 102  Q
    |||||||||| | |||| || ||||| ||||||||||| | |||||||||||| ||||||||||| ||||||| | ||||||||||||||||||    
T  23293167 acatcatcaccactaacggagcttttggacggagggactattttgatggacgtttgtaaaattcatggactaaatagatatttcgcaaaattca 23293260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 2377173 - 2377076
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| | |||| || |||||||||||||| || | ||||||||||||||||||||||||| |||||| |  || ||| |||||||||||||||||    
T  2377173 tcatcaccactaacggagcttttagacggaggaaccattttgatggacgtctgtaaaattcagagactaaatatattttttgcaaaattcagggacga 2377076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 17515435 - 17515363
Alignment:
Q  31 ttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcag 103  Q
    |||| ||| ||||||| | |||||||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  17515435 ttttggacagagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcag 17515363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 43765284 - 43765192
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattc 101  Q
    |||||||||| | |||| || ||||| || |||||||| | |||||||||||||||||||||||||  ||||| | |||||||||||||||||    
T  43765284 acatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagaaactaaatagatatttcgcaaaattc 43765192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 3150341 - 3150299
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3150341 aaattcagggactaatttgatatttcgcaaaattcagggacga 3150299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 38191984 - 38191942
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  38191984 aaattcagggactaatttgatatttcgcaaaattcagggacga 38191942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 38193510 - 38193552
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  38193510 aaattcagggactaatttgatatttcgcaaaattcagggacga 38193552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 41979352 - 41979394
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  41979352 aaattcagggactaatttgatatttcgcaaaattcagggacga 41979394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 46112631 - 46112541
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattca 102  Q
    ||||||| | ||||| | |||||  |||||||||| | |||||||||||||||||||||||| ||||||| | ||||||| ||||||||||    
T  46112631 tcatcaccactaacatagcttttgaacggagggaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattca 46112541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 46308896 - 46308854
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  46308896 aaattcagggactaatttgatatttcgcaaaattcagggacga 46308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 46310436 - 46310478
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  46310436 aaattcagggactaatttgatatttcgcaaaattcagggacga 46310478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 46611303 - 46611345
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  46611303 aaattcagggactaatttgatatttcgcaaaattcagggacga 46611345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 53094273 - 53094315
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  53094273 aaattcagggactaatttgatatttcgcaaaattcagggacga 53094315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 53187831 - 53187789
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  53187831 aaattcagggactaatttgatatttcgcaaaattcagggacga 53187789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 48830803 - 48830896
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattca 102  Q
    |||||||||| | ||||||| ||||| ||||||||||| | ||||||||||||| ||||||||||  |||||| | |||||||||  |||||||    
T  48830803 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtccgtaaaattcaaagactaaatagatatttcgttaaattca 48830896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 23876982 - 23877038
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttc 92  Q
    |||||||||| ||||||||||||||| ||| |||||||| |||||||||||||||||    
T  23876982 gacggagggatgaatttgatggacgtttgttaaattcagagactaatttgatatttc 23877038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 25535253 - 25535317
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaatt 100  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||||| || |||||||| ||||||    
T  25535253 gacggagggatgaatttggtggacgtctgttaaattcagggactaacttaatatttcgaaaaatt 25535317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 44276193 - 44276265
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaa 81  Q
    |||||||||| | ||||||| ||||| ||||||||||| | |||||||| ||||||||||||||| |||||||    
T  44276193 acatcatcaccactaacagagcttttggacggagggaccattttgatgggcgtctgtaaaattcaaggactaa 44276265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 46197867 - 46197767
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||  | |||| || ||||| |||| |||||| | ||| |||||||||||||||||||||| ||||| | ||||||| ||||||||||| ||||    
T  46197867 acatcatcatcactaacggaacttttggacgaagggaccattttaatggacgtctgtaaaattcaggaactaaatagatattttgcaaaattcagagacg 46197768  T
Q  109 a 109  Q
    |    
T  46197767 a 46197767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 23774258 - 23774199
Alignment:
Q  50 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||| |||| ||||||||    
T  23774258 tttgatggacgtctgacaaattcagggactaaattgatatttcgcataattgagggacga 23774199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 7884873 - 7884939
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggac 78  Q
    ||||||| | |||| || ||||| ||||||||||| | |||||||||||||||||||||||||||||    
T  7884873 tcatcaccactaacggaacttttggacggagggaccattttgatggacgtctgtaaaattcagggac 7884939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 46609238 - 46609196
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  46609238 aaattcagggactaatttgatatttcacaaaattcagggacga 46609196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 53092712 - 53092670
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  53092712 aaattcagggattaatttgatatttcgcaaaattcagggacga 53092670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 54900074 - 54900116
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  54900074 aaattcagggacaaatttgatatttcgcaaaattcagggacga 54900116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 48633997 - 48633924
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||   |||||||||||||||  ||||||||||||||| ||||||||||||| |||| | ||||||    
T  48633997 gacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacga 48633924  T

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Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 106
Target Start/End: Complemental strand, 35903914 - 35903875
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  35903914 aaattcagggactaatttgatattttgcaaaattcaggga 35903875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 45898352 - 45898423
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    |||||||||||   |||||| ||||||||  ||||||| ||||||| ||||||||||||| |||||||||||    
T  45898352 gacggagggacctttttgatagacgtctgacaaattcaaggactaagttgatatttcgcataattcagggac 45898423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 2661908 - 2661950
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| |||||||||||||||||||||||||||| ||||||    
T  2661908 aaattcatggactaatttgatatttcgcaaaattcacggacga 2661950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 33113184 - 33113254
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||||   |||||||||||||||  ||||| ||||||||| ||||||||||||| |||| |||||    
T  33113184 gacggagggacctttttgatggacgtctgacaaatttagggactaagttgatatttcgcataattgaggga 33113254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 44795890 - 44795932
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| |||||||||||||||||||||||||||||| ||||    
T  44795890 aaattcatggactaatttgatatttcgcaaaattcaggaacga 44795932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 23888776 - 23888849
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||   |||||||||||| ||  |||||||||||||||  |||||||||||| |||| ||||||||    
T  23888776 gacggagggacctttttgatggacgtttgacaaattcagggactaagctgatatttcgcataattgagggacga 23888849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 40508915 - 40508988
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||   |||||||||||||||  ||||||| ||| ||| ||||||||||||| |||| ||||||||    
T  40508915 gacggagggacatttttgatggacgtctgacaaattcaaggattaagttgatatttcgcataattgagggacga 40508988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 1845904 - 1845840
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaatt 100  Q
    ||||||||||||  |||||||||||||||| |||||||  |||||| ||||||||| ||| ||||    
T  1845904 gacggagggacgtttttgatggacgtctgtcaaattcaaagactaagttgatattttgcataatt 1845840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 28626530 - 28626458
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||| |||||||| ||| | |   |||||||||||||| |||||||||||| | |||||||||||||    
T  28626530 acggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacga 28626458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 7883417 - 7883375
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||    
T  7883417 aaattcaggaactaatttgatatttcacaaaatttagggacga 7883375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 23291659 - 23291617
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||| |||||| | |||||||||||||||||||||||||    
T  23291659 aaattcagagactaaatagatatttcgcaaaattcagggacga 23291617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 31887456 - 31887520
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaatt 100  Q
    |||||||||||   |||||| ||| ||||  ||||||||||||||| ||||||||||||| ||||    
T  31887456 gacggagggacctttttgatagacatctgacaaattcagggactaagttgatatttcgcataatt 31887520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 27691301 - 27691201
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||||||| || |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27691301 acatcatcactattgacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 27691202  T
Q  109 a 109  Q
    |    
T  27691201 a 27691201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 214 - 311
Target Start/End: Original strand, 395254 - 395350
Alignment:
Q  214 ttaatgagtttgcgaaataactcatgaatatgacaaacatgcttccatataattctgcatgggaaagatcaataaatgtggtcaccgtgtacatgctt 311  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  395254 ttaatgagtttgcgaaataactcatgaa-atgacaaacatgcttccatataattctgcatgggaaagatcaataaatgtggccaccgtctacatgctt 395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 33708801 - 33708901
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||||||||||||| |||||||| |||||||||||  ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  33708801 acatcatcactattaacggaccttttggacggagggacagatttgatggacgtttgtaaaattcagggactaatttaatatttcgcaaaattcagggacg 33708900  T
Q  109 a 109  Q
    |    
T  33708901 a 33708901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 13108354 - 13108432
Alignment:
Q  30 cttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13108354 cttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 13108432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 41825641 - 41825741
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||||| ||||||| ||||| ||||||| ||| | |||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  41825641 acatcatcactactaacagagcttttggacggagtgaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 41825740  T
Q  109 a 109  Q
    |    
T  41825741 a 41825741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 8609787 - 8609884
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| | |||| || ||||| ||||||||||| | |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  8609787 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacga 8609884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 13282625 - 13282525
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | |||| || ||||| ||||||||||| | |||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  13282625 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacg 13282526  T
Q  109 a 109  Q
    |    
T  13282525 a 13282525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 38547372 - 38547276
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||| | |||| || ||||| || |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38547372 tcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcatggacg 38547276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 15305944 - 15305846
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    ||||||||||| ||||| ||  |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  15305944 acatcatcactgttaacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggac 15305846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 15486313 - 15486215
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    ||||||||||| ||||| ||  |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  15486313 acatcatcactgttaacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggac 15486215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 9673162 - 9673262
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | ||||  | ||||||||||||||||| | |||||||||||||||||||||||||||| ||| | |||||||| |||||||||||||||    
T  9673162 acatcatcaccactaacgaagcttttagacggagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacg 9673261  T
Q  109 a 109  Q
    |    
T  9673262 a 9673262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 41042581 - 41042679
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    |||||||||| | |||| || ||||| ||||||||||| | ||||||||||| |||||||||||||||||||| | |||||||| ||||||||||||||    
T  41042581 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaatagatatttcacaaaattcagggac 41042679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 13486096 - 13486196
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||||| |||  || ||||| ||| ||||||| | |||||||||||||||||||||||||||||||| | ||||||||||||||| ||| ||||    
T  13486096 acatcatcactactaatggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatccagagacg 13486195  T
Q  109 a 109  Q
    |    
T  13486196 a 13486196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 22272483 - 22272383
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | |||| || ||||| || |||||||| | |||||||||||| ||||||||||||||||||| | |||||| |||||||||||||||||    
T  22272483 acatcatcaccactaacggagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcagggacg 22272384  T
Q  109 a 109  Q
    |    
T  22272383 a 22272383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 26242311 - 26242411
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||| | | |||| || ||||| ||||||||||| | ||||||||||||||||||||||||| |||||| | |||||||||||||||| |||||||    
T  26242311 acatcatcgccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaatttagggacg 26242410  T
Q  109 a 109  Q
    |    
T  26242411 a 26242411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 27406894 - 27406994
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||||||| ||||| ||| |||| ||||||| |||  |||||||||||||||||||||||||||||||| ||| |||||||| | |||||| |||||    
T  27406894 acatcatcactgttaacggacattttggacggagagactgatttgatggacgtctgtaaaattcagggactattttaatatttcgaataattcatggacg 27406993  T
Q  109 a 109  Q
    |    
T  27406994 a 27406994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 42941899 - 42941821
Alignment:
Q  31 ttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||| ||||||||||| | |||||||||| ||||||||||||||||||||| |  ||||||| ||||||||||||||||    
T  42941899 ttttggacggagggactattttgatggacatctgtaaaattcagggactaaataaatatttctcaaaattcagggacga 42941821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 7745109 - 7745209
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | |||| || ||||| || |||||||| | ||||||||| ||||||||||| |||||||||| |  |||||||||||||||||| ||||    
T  7745109 acatcatcaccactaacggagcttttggatggagggaccattttgatggatgtctgtaaaatacagggactaaataaatatttcgcaaaattcagagacg 7745208  T
Q  109 a 109  Q
    |    
T  7745209 a 7745209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 33761158 - 33761116
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  33761158 aaattcagggactaatttgatatttcgcaaaattcagggacga 33761116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 35509303 - 35509261
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35509303 aaattcagggactaatttgatatttcgcaaaattcagggacga 35509261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 5036565 - 5036492
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| ||| | |||||| ||||||||||||||||| ||||||| | |||||||| ||||||||||||||||    
T  5036565 gacggagagaccattttgatagacgtctgtaaaattcaaggactaaatagatatttcacaaaattcagggacga 5036492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 601674 - 601746
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||| |||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||    
T  601674 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacga 601746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 106
Target Start/End: Complemental strand, 13106893 - 13106854
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13106893 aaattcagggactaatttgatatttcgcaaaattcaggga 13106854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 40020625 - 40020696
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||| |||||||| |||||||||||||| ||||||||||||    |||||||||||||| ||||||||||||    
T  40020625 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcg 40020696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 27692837 - 27692879
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  27692837 aaattcagggactaatttgatattttgcaaaattcagggacga 27692879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 29237240 - 29237198
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  29237240 aaattcagggactaatttgatatttcgaaaaattcagggacga 29237198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 33707295 - 33707253
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  33707295 aaattcagggactaatttgatatttcgtaaaattcagggacga 33707253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 33762713 - 33762755
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  33762713 aaattcagggactaatttgatatttcgtaaaattcagggacga 33762755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 38548831 - 38548873
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  38548831 aaattcagggattaatttgatatttcgcaaaattcagggacga 38548873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 40339677 - 40339771
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcag 103  Q
    |||||||||||| |||| || ||||| || | |||||| | |||||||||| ||||||||||||| ||||||| | |||||||| || |||||||    
T  40339677 acatcatcactactaacggagcttttggatgaagggaccattttgatggacatctgtaaaattcatggactaaatagatatttcacataattcag 40339771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 11788441 - 11788384
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||||||||| ||||||||||||||||||| ||||||  |||| ||||||||||||||    
T  11788441 gacggagggatgaatttgatggacgtctgttaaattcgaggacaaatttgatatttcg 11788384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 28433712 - 28433793
Alignment:
Q  28 accttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| |||||||||||||| | ||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||||    
T  28433712 accttttggacggagggacgaaatcgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgagggacga 28433793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 31821538 - 31821465
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||   |||||||||||||||  |||||| |||||||| ||||||||||||| |||| ||||||||    
T  31821538 gacggagggacctttttgatggacgtctgataaattctgggactaagttgatatttcgcataattgagggacga 31821465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 13283995 - 13284035
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  13283995 aaattcatggactaatttgatatttcgcaaaattcagggac 13284035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 37526027 - 37526091
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaatt 100  Q
    |||||||||||   ||||||||| ||||| |||||||||||||||| ||||||||||||| ||||    
T  37526027 gacggagggacctttttgatggatgtctgaaaaattcagggactaagttgatatttcgcataatt 37526091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 8608327 - 8608284
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaa-ttcagggacga 109  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  8608327 aaattcagggactaatttgatatttcgcaaaatttcagggacga 8608284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 9184503 - 9184445
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgc 94  Q
    ||||||||||| | || ||| ||||||||  ||||||||||||||||||||||||||||    
T  9184503 gacggagggaccatttcgatcgacgtctgacaaattcagggactaatttgatatttcgc 9184445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 15308261 - 15308303
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  15308261 aaattcagggactaatttgatatttcgaataattcagggacga 15308303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 15488630 - 15488672
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  15488630 aaattcagggactaatttgatatttcgaataattcagggacga 15488672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 29239187 - 29239229
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  29239187 aaattcagggactaatttgatatttcgaaaaatttagggacga 29239229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 35510819 - 35510861
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  35510819 aaattcagggactaatttgatatttcacaaaattcaaggacga 35510861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 42943426 - 42943468
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||| | |||||||||||||||||||||||||    
T  42943426 aaattcagggactaaatagatatttcgcaaaattcagggacga 42943468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 33750388 - 33750461
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||   ||||||| | |||||  ||||||||||||||| ||||||||||||| |||| ||||||||    
T  33750388 gacggagggacctttttgatgaatgtctgacaaattcagggactaagttgatatttcgcataattgagggacga 33750461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 42897778 - 42897851
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||   |||||||||||||||  ||||||| ||||||| |||||||||| || |||| ||||||||    
T  42897778 gacggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttcacataattgagggacga 42897851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 31201148 - 31201220
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||   |||||||||||||||  ||||||||||| ||| ||||||||||||| |||| | ||||||    
T  31201148 acggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgatggacga 31201220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 9186617 - 9186690
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgat 110  Q
    |||||||||| || ||||| ||| | ||  ||||| ||||||||||||||||||||||| ||||  ||||||||    
T  9186617 acggagggactaaattgattgacatatgccaaatttagggactaatttgatatttcgcataatttggggacgat 9186690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 1320719 - 1320667
Alignment:
Q  54 atggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||||  ||||||||||||||| ||||||||| ||| |||| |||||    
T  1320719 atggacgtctgacaaattcagggactaagttgatattttgcataattgaggga 1320667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 26238845 - 26238773
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||  ||||||||||| | |   ||||||  ||||||| | |||||||||||||||||||||||||    
T  26238845 acggagggactgatttgatggacattttgtaaattcgaggactaaatagatatttcgcaaaattcagggacga 26238773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 46583533 - 46583631
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    |||||||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46583533 acatcatcaccattaacggaccttttggacggagggacaaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 46583631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 4855946 - 4856042
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||| |||||| || ||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4855946 tcatcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 4856042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 33602621 - 33602721
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||||| || |||| |||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33602621 acatcatcattactaacggaccttttggacggagggactaatttgacggacgtctgtaaaattcagggactaatttgatatttcacaaaattcagggacg 33602720  T
Q  109 a 109  Q
    |    
T  33602721 a 33602721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 9121645 - 9121745
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||||||||||||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||    
T  9121645 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaatttagggacg 9121744  T
Q  109 a 109  Q
    |    
T  9121745 a 9121745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 34778118 - 34778214
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||| | |||| || ||||| ||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34778118 tcatcaccactaacggagcttttggacggagggaccattttgatggacatctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 34778214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 47013059 - 47013159
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||||||| ||||| ||| |||| |||||||||||  ||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||    
T  47013059 acatcatcactgttaacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacg 47013158  T
Q  109 a 109  Q
    |    
T  47013159 a 47013159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 51896129 - 51896227
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    |||||||||| | ||||||| ||||| ||||||||||| | |||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||    
T  51896129 acatcatcaccactaacagagcttttggacggagggactattttgatggacatctgtaaaattcagggactaaatagatatttcgcaaaattcagggac 51896227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 2869726 - 2869626
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | ||||||| ||||| ||||||||||| | |||||||||||||||||||||| || |||||| | ||||||||||||||||||||||||    
T  2869726 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaatttagagactaaatagatatttcgcaaaattcagggacg 2869627  T
Q  109 a 109  Q
    |    
T  2869626 a 2869626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 15104588 - 15104488
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | |||  || ||||| |||||| |||| | |||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||    
T  15104588 acatcatcaccactaatggagcttttggacggaaggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaacg 15104489  T
Q  109 a 109  Q
    |    
T  15104488 a 15104488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 31238475 - 31238570
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    ||||||| | |||| || ||||| ||| || |||| | |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  31238475 tcatcaccactaacggagcttttggacagatggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggac 31238570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 27087430 - 27087332
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    |||||||||| | |||| || ||||| |||||| || | | |||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||    
T  27087430 acatcatcaccactaacggagcttttggacggatgggccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggac 27087332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 6818658 - 6818755
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| | |||| || ||||| ||||||||||| | |||||||||||||||||||||||||||||||| | ||||||| || |||| |||||||||    
T  6818658 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgctaaatccagggacga 6818755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 25278348 - 25278445
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| | |||| || ||||| ||||||||||| | |||||||||||| ||||||||||| ||||||| | | |||||||||||||||||||||||    
T  25278348 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaataggtatttcgcaaaattcagggacga 25278445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 50556078 - 50556174
Alignment:
Q  13 catcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||| | |||| || ||||| ||||||||||| | |||||| ||||||||||||||| ||||||||| | ||||||||||||||||||| |||||    
T  50556078 catcaccactaacggagcttttggacggagggaccattttgatagacgtctgtaaaatttagggactaaatagatatttcgcaaaattcagagacga 50556174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 37344486 - 37344389
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| | |||| || ||||| ||||||||||| | |||||||||||| |||||||||||  |||||| | | |||||||||||||||||||||||    
T  37344486 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaagactaaataggtatttcgcaaaattcagggacga 37344389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 3013498 - 3013553
Alignment:
Q  54 atggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  3013498 atggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacga 3013553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 26223676 - 26223634
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26223676 aaattcagggactaatttgatatttcgcaaaattcagggacga 26223634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 46582099 - 46582057
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  46582099 aaattcagggactaatttgatatttcgcaaaattcagggacga 46582057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 1442668 - 1442599
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggac 78  Q
    ||||||||||| ||||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||||    
T  1442668 acatcatcactgttaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggac 1442599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 9120158 - 9120086
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||| |||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||    
T  9120158 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacga 9120086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 5783498 - 5783427
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||| |||||||| |||||||||||||| ||||||||||||    |||||||||||||| ||||||||||||    
T  5783498 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcg 5783427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 25278975 - 25279030
Alignment:
Q  54 atggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||| | |||||||||||||||| ||| ||||    
T  25278975 atggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttaggaacga 25279030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 106
Target Start/End: Original strand, 37345962 - 37346001
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37345962 aaattcagggactaatttgatatttcgcaaaattcaggga 37346001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 4854499 - 4854457
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  4854499 aaattcagggactaatttgatctttcgcaaaattcagggacga 4854457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 34776658 - 34776616
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  34776658 aaattcagggactaatttgatatttcgtaaaattcagggacga 34776616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 42134602 - 42134532
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||||   |||||||||||||||  ||||||||||||||| ||||||||||||| |||| |||||    
T  42134602 gacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgaggga 42134532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 51122039 - 51121961
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaatt 100  Q
    ||||||||||||| ||||||||||| | ||||||||||||  |  |||||||||||| || ||||||||| ||||||||    
T  51122039 taacagaccttttggacggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaatt 51121961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 8168029 - 8167989
Alignment:
Q  69 attcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  8168029 attcagggactaatttgatatttcgcaaaattcagagacga 8167989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 18183961 - 18184017
Alignment:
Q  50 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||| |||| |||||    
T  18183961 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgaggga 18184017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 102
Target Start/End: Complemental strand, 25276831 - 25276796
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattca 102  Q
    ||||||||||||||||||||||||||||||||||||    
T  25276831 aaattcagggactaatttgatatttcgcaaaattca 25276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 36895528 - 36895587
Alignment:
Q  50 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||| |||| | ||||||    
T  36895528 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacga 36895587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 1444151 - 1444221
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    |||||||||| |||||||| ||| | |   ||||||||||||||||||||||||| | |||||||||||||    
T  1444151 acggagggactaatttgattgacattttgtaaattcagggactaatttgatattttgaaaaattcagggac 1444221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 8169568 - 8169610
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||||||||||||| | |||||||||||||||    
T  8169568 aaattcagggactaatttgatattttgtaaaattcagggacga 8169610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 47011545 - 47011503
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||||||||||||||| |||||||| ||||||    
T  47011545 aaattcagggactaatttgatatttcgaaaaattcatggacga 47011503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 27940727 - 27940655
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||   |||||||||||||||  ||||||| ||| ||| ||||||||||||| |||| ||||||||    
T  27940727 acggagggacctttttgatggacgtctgataaattcaaggattaaattgatatttcgcataattgagggacga 27940655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 52643648 - 52643692
Alignment:
Q  65 taaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||    
T  52643648 taaaattcagggactaaataaatatttcgcaaaattcagggacga 52643692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 27089279 - 27089321
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||| |||||||||||||| ||||||||| ||||||    
T  27089279 aaattcagggattaatttgatatttcacaaaattcaaggacga 27089321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 33599307 - 33599265
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||| || |||||||||||||||||||||||| ||||||    
T  33599307 aaattcagagattaatttgatatttcgcaaaattcatggacga 33599265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 46638811 - 46638881
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||||   |||| ||||||||||  ||||||| ||||||| ||||||||||||| |||| |||||    
T  46638811 gacggagggacctttttggtggacgtctgacaaattcaaggactaagttgatatttcgcataattgaggga 46638881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 144
Target Start/End: Original strand, 6818780 - 6818813
Alignment:
Q  111 aggacgaatttgaggtattagtcatttagtttta 144  Q
    |||||||||||||||||||||||||||| |||||    
T  6818780 aggacgaatttgaggtattagtcatttattttta 6818813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 31801753 - 31801680
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||   ||||||||||||||   ||||| | ||||||| ||||||||||||| |||| ||||||||    
T  31801753 gacggagggacctttttgatggacgtctcacaaatttaaggactaagttgatatttcgcataattgagggacga 31801680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 42559916 - 42559973
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||||||||| ||||||||||||||||||| || || || ||| ||||| ||||||||    
T  42559916 gacggagggatgaatttgatggacgtctgttaattttagagacaaatttaatatttcg 42559973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 27089346 - 27089382
Alignment:
Q  111 aggacgaatttgaggtattagtcatttagttttatat 147  Q
    |||||||||||||||||||||||| |||| |||||||    
T  27089346 aggacgaatttgaggtattagtcaattagatttatat 27089382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 31236908 - 31236868
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    ||||||||| ||||| | |||||||||||||||||||||||    
T  31236908 aaattcaggaactaaatagatatttcgcaaaattcagggac 31236868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 45381002 - 45381058
Alignment:
Q  50 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||||||||  ||||||| | ||||| ||||||||||||| |||| |||||    
T  45381002 tttgatggacgtctgacaaattcatgaactaagttgatatttcgcataattgaggga 45381058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 1e-38; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 24541188 - 24541289
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagg-gacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    |||||||||||||||| ||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24541188 acatcatcactattaatagaccttttggacggaggagatgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 24541287  T
Q  108 ga 109  Q
    ||    
T  24541288 ga 24541289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 2854304 - 2854403
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||||||||||||  |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  2854304 acatcatcactattaatggaccttttggacggagggacgaatttgttggacgtctgtaaaattcagggactaatttgat-tttcgaaaaattcagggacg 2854402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 29621758 - 29621858
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||||||||||||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  29621758 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacg 29621857  T
Q  109 a 109  Q
    |    
T  29621858 a 29621858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 36057590 - 36057690
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| |||||| || ||||| ||||||||||| | ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||    
T  36057590 acatcatcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacg 36057689  T
Q  109 a 109  Q
    |    
T  36057690 a 36057690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 40780697 - 40780597
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||||||| ||||| ||| |||| |||||||||||  ||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||    
T  40780697 acatcatcactgttaacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacg 40780598  T
Q  109 a 109  Q
    |    
T  40780597 a 40780597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 17574462 - 17574365
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| | |||| || ||||| ||||||||||| | |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  17574462 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacga 17574365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 34327782 - 34327682
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | ||||||| ||||| ||||||| ||| | |||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||    
T  34327782 acatcatcaccactaacagagcttttggacggagagaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagcgacg 34327683  T
Q  109 a 109  Q
    |    
T  34327682 a 34327682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 42473584 - 42473684
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||||||| ||||| ||| |||| |||||| ||||  |||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||    
T  42473584 acatcatcactgttaacggacattttggacggaaggactgatttgatggacgtctgtaaaattcagggactattttgatatttcgaataattcagggacg 42473683  T
Q  109 a 109  Q
    |    
T  42473684 a 42473684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 7267987 - 7267890
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| | |||| || ||||| ||||||||||  | |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||    
T  7267987 tcatcaccactaacggagcttttggacggagggatcattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagtgacga 7267890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 18624985 - 18625085
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||||| |||| || ||||| |||||| |||| | |||||||||||  ||||||||||||||||||| | |||||||| |||||||||||||||    
T  18624985 acatcatcactactaacggagcttttggacggaaggaccattttgatggacgagtgtaaaattcagggactaaatagatatttcacaaaattcagggacg 18625084  T
Q  109 a 109  Q
    |    
T  18625085 a 18625085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 30468260 - 30468357
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| | |||| || ||||| ||||||||||| | |||||||||||||||||||||||| ||||||| | |||||||||||||||| || |||||    
T  30468260 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattgagagacga 30468357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 2179913 - 2179834
Alignment:
Q  30 cttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||| ||||||||||| | ||||||||| |||||||||||||||||| ||| | |||||||| ||||||||||||||||    
T  2179913 cttttggacggagggaccattttgatggatgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacga 2179834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 27075939 - 27075876
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaatt 100  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||    
T  27075939 acggagggatgaatttgatggacgtctgttaaattcaggaactaatttgatattttgaaaaatt 27075876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 7269446 - 7269488
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  7269446 aaattcagggactaatttgatatttcgcaaaattcagggacga 7269488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 18728606 - 18728679
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||   |||||||||||||||  ||||||||||||||| ||||||||||||| |||| ||||||||    
T  18728606 gacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattaagggacga 18728679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 32087634 - 32087561
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||   ||||||||||||||| |||||| ||||||||| ||||||||||||| |||| ||||||||    
T  32087634 gacggagggacctttttgatggacgtctgaaaaattaagggactaagttgatatttcgcataattaagggacga 32087561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 8539781 - 8539729
Alignment:
Q  50 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattca 102  Q
    |||||||||||| ||||||||||||||||||| | ||||||||||||||||||    
T  8539781 tttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattca 8539729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 40782181 - 40782253
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||| |||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||    
T  40782181 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacga 40782253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 2852975 - 2852933
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  2852975 aaattcaggaactaatttgatatttcgcaaaattcagggacga 2852933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 21842992 - 21843032
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  21842992 aaattcagggactaatttgatatttcgcaaaattcatggac 21843032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 29620257 - 29620185
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||| |||||||| ||| | |   |||||||| |||||||||||||||||| |||||||||||||||    
T  29620257 acggagggactaatttgattgacattttgtaaattcagagactaatttgatatttcgaaaaattcagggacga 29620185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 38596974 - 38596915
Alignment:
Q  50 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||   ||||||||||||||| ||||||||||||| |||| ||||||||    
T  38596974 tttgatggacgtctaacaaattcagggactaagttgatatttcgcataattgagggacga 38596915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 30463989 - 30463947
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||| | |||||||||||||||||||||||||    
T  30463989 aaattcagggactaaatagatatttcgcaaaattcagggacga 30463947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 43318064 - 43318134
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||||   ||| |||||||||||  ||||||||||||||| ||||||||||||| |||| |||||    
T  43318064 gacggagggaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgaggga 43318134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 35395453 - 35395380
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||   ||||||||||||||   ||||||||| ||||| ||||||||||||| |||| ||||||||    
T  35395453 gacggagggacctttttgatggacgtctaacaaattcaggaactaaattgatatttcgcataattgagggacga 35395380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 43492131 - 43492172
Alignment:
Q  65 taaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  43492131 taaaattcagggactaaatagatatttcgcaaaattcaggga 43492172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 8541271 - 8541313
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| ||||||| | |||||||||||||||||||||||||    
T  8541271 aaattcaaggactaaatagatatttcgcaaaattcagggacga 8541313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 12738736 - 12738778
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||| | |||||||||||||||||||| ||||    
T  12738736 aaattcagggactaaatagatatttcgcaaaattcaggtacga 12738778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 12801559 - 12801601
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||| | |||||||||||||||||||| ||||    
T  12801559 aaattcagggactaaatagatatttcgcaaaattcaggtacga 12801601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 28813765 - 28813807
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||| | |||||||||||||||||| ||||||    
T  28813765 aaattcagggactaaatagatatttcgcaaaattcaaggacga 28813807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 35292404 - 35292450
Alignment:
Q  54 atggacgtctgtaaaattcagggactaatttgatatttcgcaaaatt 100  Q
    |||||||||||  ||||||||||||||| ||||||||||||| ||||    
T  35292404 atggacgtctgacaaattcagggactaagttgatatttcgcataatt 35292450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 9221684 - 9221737
Alignment:
Q  39 ggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttc 92  Q
    ||||||| |||||||||||| |||||| ||||||||   |||||||||||||||    
T  9221684 ggagggatgaatttgatggatgtctgttaaattcagaagctaatttgatatttc 9221737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 19997238 - 19997165
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||| ||| |||||||||| | |||||| ||||||||| | ||||||||||||| | ||||||  |||||||    
T  19997238 gacggaaggatgaatttgatgaatgtctgttaaattcaggaagtaatttgatattttgaaaaatttggggacga 19997165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 24496877 - 24496792
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    ||||||| | ||| |||||| |||| | ||||||| ||||||   ||||||||||| |||||||||||||| || |||| ||||||    
T  24496877 taacagaacatttggacggatggaccattttgatgaacgtctcacaaattcagggattaatttgatatttcacataattgagggac 24496792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 38178111 - 38178167
Alignment:
Q  50 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||||||||  ||||||||  ||||| ||||||||||||| |||| |||||    
T  38178111 tttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgaggga 38178167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 38205335 - 38205391
Alignment:
Q  50 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||||||||  ||||||||  ||||| ||||||||||||| |||| |||||    
T  38205335 tttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgaggga 38205391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 4e-38; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 27666042 - 27666142
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||||||||||||| | |||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27666042 acatcatcactattaacgggccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 27666141  T
Q  109 a 109  Q
    |    
T  27666142 a 27666142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 29996494 - 29996589
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    |||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29996494 tcatcactattaacggaccttttggatggagggacgaatttgatggacgtctgtaaaattcagggattaatttgatatttcgcaaaattcagggac 29996589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 56477 - 56377
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||||| |||||||| |||| ||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56477 acatcatcactactaacagacattttggacggagggagtgaattgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 56378  T
Q  109 a 109  Q
    |    
T  56377 a 56377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 20478189 - 20478089
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||||||||||||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||    
T  20478189 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcaggtacg 20478090  T
Q  109 a 109  Q
    |    
T  20478089 a 20478089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 6602479 - 6602385
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    ||||||| | |||| || ||||| ||||||||||| | |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  6602479 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggga 6602385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 34776914 - 34776987
Alignment:
Q  31 ttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagg 104  Q
    |||| ||||||||||| | |||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  34776914 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagg 34776987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 24228386 - 24228486
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | |||  || ||||| |||| |||||| | ||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  24228386 acatcatcaccactaatggagcttttggacgaagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcagggacg 24228485  T
Q  109 a 109  Q
    |    
T  24228486 a 24228486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 35693347 - 35693467
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatt--tgatatttcgcaaaattcaggga 106  Q
    |||||||||| | ||||||| ||||| || |||||||| | ||||||||||||||||||||||||||||||||||   |||||| |||||||||||        
T  35693347 acatcatcaccactaacagaacttttggatggagggaccattttgatggacgtctgtaaaattcagggactaattagagatattccgcaaaattca---- 35693442  T
Q  107 cgataggacgaatttgaggtattagtcat 135  Q
        |||||||||||||||||||||||||    
T  35693443 ----aggacgaatttgaggtattagtcat 35693467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 37115503 - 37115603
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | |||| || ||||| ||||||||||| | |||||||||||||||||||||||||| ||||| | ||||||| |||||||||||| |||    
T  37115503 acatcatcaccactaacggagcttttggacggagggactattttgatggacgtctgtaaaattcaggtactaaatagatattttgcaaaattcaggaacg 37115602  T
Q  109 a 109  Q
    |    
T  37115603 a 37115603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 39859209 - 39859304
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    ||||||| | |||| || ||||| ||||||||||| | ||||| |||||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  39859209 tcatcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggac 39859304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 38474120 - 38474220
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | |||| || ||||| |||||| |||| | |||||| | ||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  38474120 acatcatcaccactaacggagcttttggacggatggaccattttgataggcgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggacg 38474219  T
Q  109 a 109  Q
    |    
T  38474220 a 38474220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 45359480 - 45359384
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||| | |||| || ||||| || |||||||| | |||||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||    
T  45359480 tcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcaaggacg 45359384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 366818 - 366762
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttc 92  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||    
T  366818 gacggagggatgaatttgatagacgtctgttaaattcagggactaatttgatatttc 366762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 37796185 - 37796249
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaatt 100  Q
    ||||||||||| | ||||||||||||| |||||||||||||||||| | ||||||||||||||||    
T  37796185 gacggagggactattttgatggacgtccgtaaaattcagggactaaatagatatttcgcaaaatt 37796249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 45463804 - 45463717
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||| |||||||| |||||||||||||| ||||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||||    
T  45463804 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacga 45463717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 13168267 - 13168167
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattc---agggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||| | |||| || ||||| |||||| |||| | |||||||||||||||||||||||   ||||||||| | |||||||||||||||||| |||||    
T  13168267 tcatcaccactaacggagcttttggacggatggaccattttgatggacgtctgtaaaattcaggagggactaaatagatatttcgcaaaattcaaggacg 13168168  T
Q  109 a 109  Q
    |    
T  13168167 a 13168167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 33038801 - 33038871
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||||   ||||||||||||||| |||||||||||||||| ||||||||||||| |||| |||||    
T  33038801 gacggagggacctttttgatggacgtctgaaaaattcagggactaagttgatatttcgcataattgaggga 33038871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 35402058 - 35402016
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35402058 aaattcagggactaatttgatatttcgcaaaattcagggacga 35402016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 35403619 - 35403661
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35403619 aaattcagggactaatttgatatttcgcaaaattcagggacga 35403661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 48303639 - 48303708
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatattt 91  Q
    ||||||||||||| |||||||||||||| ||||||||||||    |||||||||||||| ||||||||||    
T  48303639 taacagaccttttggacggagggacgaaattgatggacgtcaaataaattcagggactattttgatattt 48303708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 20479689 - 20479761
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||| |||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||    
T  20479689 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacga 20479761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 30940402 - 30940502
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | |||| || ||||| ||||||| ||| | ||||||| |||| ||||||||||||||||||| | ||||||||| |||||| || ||||    
T  30940402 acatcatcaccactaacggagcttttggacggagagaccattttgatgaacgtttgtaaaattcagggactaaatagatatttcgtaaaattaagagacg 30940501  T
Q  109 a 109  Q
    |    
T  30940502 a 30940502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 47386186 - 47386286
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | |||| || ||||| ||||||  ||| | |||||||||||||||||||||| || |||||| |  ||||||||||||||||| |||||    
T  47386186 acatcatcaccactaacggagcttttggacggaatgaccattttgatggacgtctgtaaaatttagagactaaataaatatttcgcaaaattcaaggacg 47386285  T
Q  109 a 109  Q
    |    
T  47386286 a 47386286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 48852324 - 48852415
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaatt 100  Q
    |||||||||| | ||||||| ||||| ||| ||| ||| | |||||||||||||||||||||||| ||| ||| | ||||||| ||||||||    
T  48852324 acatcatcaccactaacagagcttttggaccgagagaccattttgatggacgtctgtaaaattcaaggattaaatagatattttgcaaaatt 48852415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 7402002 - 7401956
Alignment:
Q  47 gaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  7402002 gaatttgatggacgtctgttaaattcagggacgaatttgatatttcg 7401956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 46996706 - 46996779
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||   |||||||||||||||  |||||||| |||||| ||||||||||||| |||| ||||||||    
T  46996706 gacggagggacctttttgatggacgtctgacaaattcagtgactaagttgatatttcgcataattgagggacga 46996779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 27664519 - 27664479
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  27664519 aaattcagggactaatttgatattttgcaaaattcagggac 27664479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 4322562 - 4322633
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||| |||||||| |||||||||||||| |||||||| |||    |||||||||||||| ||||||||||||    
T  4322562 taacggaccttttggacggagggacgaaattgatggatgtcaaacaaattcagggactattttgatatttcg 4322633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 78014 - 78056
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||| |||||||||||| |||||||||||||||||    
T  78014 aaattcagggacaaatttgatattttgcaaaattcagggacga 78056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 2167599 - 2167529
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||||   |||||||| ||||||  ||||||||||||||| ||||||||||||| |||| |||||    
T  2167599 gacggagggacctttttgatgggcgtctgacaaattcagggactaagttgatatttcgcataattgaggga 2167529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 11682901 - 11682827
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgat 110  Q
    ||||||||||| || |||||||||||||    |||||| ||||||||||||||||| ||| |||| |||||||||    
T  11682901 gacggagggactaaattgatggacgtctaacgaattcaaggactaatttgatattttgcataattgagggacgat 11682827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 23906249 - 23906314
Alignment:
Q  20 attaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttg 85  Q
    |||||| || ||||| ||||||||||| | ||||||||||| |||||||||| |||||| ||||||    
T  23906249 attaacggagcttttggacggagggaccattttgatggacgactgtaaaatttagggacgaatttg 23906314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 34691129 - 34691060
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatattt 91  Q
    ||||| ||||||| || ||||||||||| |||||||||||| |  |||||||| ||||| ||||||||||    
T  34691129 taacataccttttggatggagggacgaaattgatggacgtcagacaaattcagagactattttgatattt 34691060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 38614913 - 38614985
Alignment:
Q  33 ttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||||||| | ||| |||||||||||  ||||||||||||||| || |||||||||| |||| |||||    
T  38614913 ttagacggagggac-atttttatggacgtctgacaaattcagggactaagttaatatttcgcataattgaggga 38614985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 13169683 - 13169723
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  13169683 aaattcagggactaaatagatatttcgcaaaattcagggac 13169723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 35344295 - 35344367
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||   ||||||||||||||   ||||||||||| ||| ||||||||||||| |||| ||||||||    
T  35344295 acggagggacctttttgatggacgtcttataaattcagggattaaattgatatttcgcataattgagggacga 35344367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 38613503 - 38613555
Alignment:
Q  54 atggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||||  ||||||||||||||| ||||||||||||| |||| |||||    
T  38613503 atggacgtctgacaaattcagggactaagttgatatttcgcataattgaggga 38613555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 1546421 - 1546343
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaatt 100  Q
    |||| |||||||| ||||||||||| | ||||||||||||  |  ||||||| ||||  | ||||||||||||||||||    
T  1546421 taacggaccttttggacggagggaccattttgatggacgtgagagaaattcaaggacgcaattgatatttcgcaaaatt 1546343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 8423286 - 8423356
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    ||||||||||   |||||| ||||||||  ||||||||||| ||| ||||||||||||| |||| ||||||    
T  8423286 acggagggacctttttgattgacgtctgataaattcagggattaaattgatatttcgcataattgagggac 8423356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 39857734 - 39857692
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||| |||||||| | |||||||||||||||||||||||||    
T  39857734 aaattctgggactaaatagatatttcgcaaaattcagggacga 39857692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 47384383 - 47384341
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||| |||||||||| |||||||||||||||||| ||||||    
T  47384383 aaattcggggactaattagatatttcgcaaaattcaaggacga 47384341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 23953925 - 23953852
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||   |||||| ||||||||  ||||||| ||||||| ||||||||||||| |||| | ||||||    
T  23953925 gacggagggacctttttgattgacgtctgacaaattcacggactaagttgatatttcgcataattgatggacga 23953852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 47341712 - 47341760
Alignment:
Q  58 acgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||  ||||||||||||||| ||||||||||||| |||| |||||    
T  47341712 acgtctgacaaattcagggactaagttgatatttcgcataattgaggga 47341760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 4e-38; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 43519571 - 43519471
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||||||||||||  |||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43519571 acatcatcactattaatggaccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 43519472  T
Q  109 a 109  Q
    |    
T  43519471 a 43519471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 51012070 - 51011980
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattca 102  Q
    ||||||||| ||||||| ||||| ||||||||||| | ||||||||||||||||||||||||| |||||| | ||||||||||||||||||    
T  51012070 tcatcactactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattca 51011980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 41761723 - 41761823
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | ||||  | ||||| ||||||||||| | |||||||||||||||||||||||||||||||| | ||||||||||||||||  ||||||    
T  41761723 acatcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttcgggacg 41761822  T
Q  109 a 109  Q
    |    
T  41761823 a 41761823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 49523271 - 49523171
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | |||| ||  |||| ||||||||||| | ||||||| |||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  49523271 acatcatcaccactaacggattttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacg 49523172  T
Q  109 a 109  Q
    |    
T  49523171 a 49523171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 42980782 - 42980684
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    |||||||||| | ||||||| ||||| ||||||||||| | |||||||||||||||||||||| ||||||||| | || |||||| |||||||| ||||    
T  42980782 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattaagggactaaatagaaatttcgtaaaattcatggac 42980684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 41781686 - 41781588
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    |||||||||  | |||| || ||||| ||||||||||| | ||||||||| |||||||||||||||||||||| |  |||||| |||||||||||||||    
T  41781686 acatcatcatcactaacggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggactaaataaatattttgcaaaattcagggac 41781588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 39083773 - 39083686
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||| |||||||| |||||||||||||| ||||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||||    
T  39083773 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacga 39083686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 4173740 - 4173782
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4173740 aaattcagggactaatttgatatttcgcaaaattcagggacga 4173782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 43507256 - 43507214
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  43507256 aaattcagggactaatttgatatttcgcaaaattcagggacga 43507214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 43508653 - 43508695
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  43508653 aaattcagggactaatttgatatttcgcaaaattcagggacga 43508695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 39189518 - 39189445
Alignment:
Q  20 attaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||||| |||||||| |||||||||||||| ||||||||||||    |||||||||||||| ||||||||||||    
T  39189518 attaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcg 39189445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 48813934 - 48813837
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||| |  |||||| ||||| |||| |||||| | |||||||||||||| ||||||||||| ||||| |  |||||| ||||||||||||||    
T  48813934 acatcatcaccaccaacagagcttttggacgaagggaccattttgatggacgtctataaaattcaggaactaaatatatattttgcaaaattcaggga 48813837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 48646724 - 48646824
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | ||||  | ||||| |||||| |||| | ||||||| | |||||||||||||||||||||| | |||||||||| ||||||| |||||    
T  48646724 acatcatcaccactaacgaagcttttggacggaaggaccattttgatgaaggtctgtaaaattcagggactaaatagatatttcgctaaattcaaggacg 48646823  T
Q  109 a 109  Q
    |    
T  48646824 a 48646824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 5484674 - 5484603
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||| |||||||| |||||||||||||| ||||||||||||    |||||||||||||| ||||||||||||    
T  5484674 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcg 5484603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 39921628 - 39921557
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||| |||||||| |||||||||||||| ||||||||||||    |||||||||||||| ||||||||||||    
T  39921628 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcg 39921557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 43779857 - 43779928
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||| |||||||| |||||||||||||| ||||||||||||    |||||||||||||| ||||||||||||    
T  43779857 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcg 43779928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 319362 - 319320
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  319362 aaattcaggaactaatttgatatttcgcaaaattcagggacga 319320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 4169775 - 4169733
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  4169775 aaattcagggactaatttgatatttcgcaaaattcagagacga 4169733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 33266010 - 33266052
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  33266010 aaattcagggactaatttgatatttcgcaaaattcaggaacga 33266052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 35404425 - 35404522
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| | |||| || ||||| |||||| |||| | |||| ||||||||||||||||||||||| ||| |  ||||||||||||||| | ||||||    
T  35404425 tcatcaccactaacggagcttttggacggatggaccattttgttggacgtctgtaaaattcagggattaaataaatatttcgcaaaattgaaggacga 35404522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 11601786 - 11601727
Alignment:
Q  40 gagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaatt 100  Q
    ||||||| | ||||||||||||||||||||||||||||||||| | |||||| ||||||||    
T  11601786 gagggactattttgatggacgtctgtaaaattcagggactaatat-atattttgcaaaatt 11601727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 44558511 - 44558567
Alignment:
Q  50 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||| |||| |||||    
T  44558511 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgaggga 44558567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 44794765 - 44794837
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||   |||||||||||||||  ||||||||||| ||| ||||||||||||| |||| ||||||||    
T  44794765 acggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacga 44794837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 32652233 - 32652162
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||| |||||||| |||||||||||||| ||||||||||||    ||||||| |||||| ||||||||||||    
T  32652233 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcaaggactattttgatatttcg 32652162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 102
Target Start/End: Original strand, 43521109 - 43521144
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattca 102  Q
    ||||||||||||||||||||||||||||||||||||    
T  43521109 aaattcagggactaatttgatatttcgcaaaattca 43521144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 44994277 - 44994348
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||| |||||||| || ||||||||||| ||||||||||||    |||||||||||||| ||||||||||||    
T  44994277 taacggaccttttggatggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcg 44994348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 835012 - 835082
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    |||||||||| |||||||| ||||| |   |||||||||||||| |||||||||||| | |||||||||||    
T  835012 acggagggactaatttgattgacgttttgtaaattcagggactattttgatatttcgaataattcagggac 835082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 27624912 - 27624862
Alignment:
Q  50 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaatt 100  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||| ||||    
T  27624912 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataatt 27624862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 33264471 - 33264429
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||| ||||||||||||||| |||||||||||||||||    
T  33264471 aaattcaggaactaatttgatattttgcaaaattcagggacga 33264429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 51013886 - 51013928
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||| ||||||||||| |||||||||||||||||    
T  51013886 aaattcagggactcatttgatattttgcaaaattcagggacga 51013928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 35996183 - 35996110
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||   |||||||||||||||  ||||||||||| ||| ||||||||| ||| |||| ||||||||    
T  35996183 gacggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcacaattgagggacga 35996110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 833342 - 833270
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||| |||||||| ||| | |   |||||||||||||| |||||||||||| | |||||||||||||    
T  833342 acggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacga 833270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 2827524 - 2827452
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||||   |||||||||||||||  ||||||| ||||||| |||||||||| || |||| |||||||    
T  2827524 gacggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttcacataattgagggacg 2827452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 5437930 - 5437858
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||| |||||||| ||| | |   |||||||||||||| |||||||||||| | |||||||||||||    
T  5437930 acggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacga 5437858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 5439617 - 5439689
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||| |||||||| ||| | |   |||||||||||||| |||||||||||| | |||||||||||||    
T  5439617 acggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacga 5439689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 47941930 - 47941858
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||   |||||||||||||||  ||||||||||| ||| ||||||||||||| |||| || |||||    
T  47941930 acggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagagacga 47941858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 110
Target Start/End: Complemental strand, 230525 - 230482
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacgat 110  Q
    |||||||| |||||||||||||||||||| |||| |||||||||    
T  230525 aaattcagagactaatttgatatttcgcataattgagggacgat 230482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 13450970 - 13451041
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    ||||||| | ||| || |||||||| | |||||||||||||||  ||||||| |||||| ||||||||||||    
T  13450970 taacagagcatttggatggagggaccattttgatggacgtctgataaattcaaggactattttgatatttcg 13451041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 10372711 - 10372781
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    ||||||||||   |||||||||||||||  |||||||||||  || ||||||||||||| |||| ||||||    
T  10372711 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgatatttcgcataattgagggac 10372781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 39345653 - 39345611
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||| | | |||||||||||||||||||||||    
T  39345653 aaattcagggactaaatagctatttcgcaaaattcagggacga 39345611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 102
Target Start/End: Original strand, 320903 - 320935
Alignment:
Q  70 ttcagggactaatttgatatttcgcaaaattca 102  Q
    |||| ||||||||||||||||||||||||||||    
T  320903 ttcaaggactaatttgatatttcgcaaaattca 320935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 42880764 - 42880816
Alignment:
Q  41 agggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    ||||||||| ||||||||||||    |||||||||||||| ||||||||||||    
T  42880764 agggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcg 42880816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 13613559 - 13613659
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | |||  |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13613559 acatcatcaccactaatggaccttttggacggagggactaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 13613658  T
Q  109 a 109  Q
    |    
T  13613659 a 13613659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 32439071 - 32439168
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||| ||||||| ||||| ||||||||||| | |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  32439071 tcatcactactaacagatcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacga 32439168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 3456893 - 3456795
Alignment:
Q  11 atcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||| ||  |||| |||||||||||  |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  3456893 atcatcactattaacggatattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacga 3456795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 20523513 - 20523413
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | ||||||| ||||| ||||||||||| | |||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  20523513 acatcatcaccactaacagaacttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 20523414  T
Q  109 a 109  Q
    |    
T  20523413 a 20523413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 32455868 - 32455968
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||||| ||||||| ||| |||| |||||||||||  |||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||    
T  32455868 acatcatcattattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagtgactaatttgatatttcgaaaaattcagggacg 32455967  T
Q  109 a 109  Q
    |    
T  32455968 a 32455968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 7372935 - 7373035
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | |||  || ||||| ||||||||||| | ||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||    
T  7372935 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaataaatatttcgcaaaattcagggacg 7373034  T
Q  109 a 109  Q
    |    
T  7373035 a 7373035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 9398807 - 9398713
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcag 103  Q
    |||||||||| | |||| || ||||| ||||||||||| | ||||||| |||||| ||||||||||||||||| | |||||||||||||||||||    
T  9398807 acatcatcaccactaacggaacttttggacggagggaccattttgatgaacgtctataaaattcagggactaaatagatatttcgcaaaattcag 9398713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 10568546 - 10568446
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | |||| || ||||| ||||||||||| | |||||| ||||||||||||||||||||||||| |  ||||||||| ||||||| |||||    
T  10568546 acatcatcaccactaacggagcttttggacggagggactattttgatagacgtctgtaaaattcagggactaaataaatatttcgctaaattcaaggacg 10568447  T
Q  109 a 109  Q
    |    
T  10568446 a 10568446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 7049904 - 7049828
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttg 85  Q
    |||||||||| |  ||| || ||||| ||||||||||| | ||||||||||||||||||||||||||||| ||||||    
T  7049904 acatcatcaccacgaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggacgaatttg 7049828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 35175856 - 35175924
Alignment:
Q  25 cagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||||||||| |||||||||||||| ||||||||||||    |||||||||||||| ||||||||||||    
T  35175856 cagaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcg 35175924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 3018450 - 3018509
Alignment:
Q  50 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||| |||| ||||||||    
T  3018450 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggacga 3018509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 17952032 - 17952103
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||| |||||||| |||||||||||||| ||||||||||||    |||||||||||||| ||||||||||||    
T  17952032 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcg 17952103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 106
Target Start/End: Original strand, 32518497 - 32518536
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32518497 aaattcagggactaatttgatatttcgcaaaattcaggga 32518536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 32517021 - 32516924
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| | |||| || ||||| ||||||||||| | |||||||||||| ||||||||||| || |||| | | ||||| | |||||||||||||||    
T  32517021 tcatcaccactaacggagcttttggacggagggacaattttgatggacgtatgtaaaattcaagggctaaataggtattttgtaaaattcagggacga 32516924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 3480627 - 3480699
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||| |||||||| ||| | |   |||||||||||||| |||||||||||| |||||||||||||||    
T  3480627 acggagggactaatttgattgacattttgtaaattcagggactagtttgatatttcgaaaaattcagggacga 3480699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 6899632 - 6899532
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||  | |||| || ||||| |||| |||||| | ||||||||| |||||||||||| ||||||||| | |||||||| ||||||| || ||||    
T  6899632 acatcatcaacactaacggagcttttggacgaagggaccattttgatggatgtctgtaaaatttagggactaaatagatatttcacaaaatttagagacg 6899533  T
Q  109 a 109  Q
    |    
T  6899532 a 6899532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 32454367 - 32454295
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||| |||||||| ||| | |   ||||||||||||||||||||||||||| |||||||| ||||||    
T  32454367 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcaaggacga 32454295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 2968245 - 2968186
Alignment:
Q  50 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||  ||||||||||| ||| ||||||||||||| |||| ||||||||    
T  2968245 tttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacga 2968186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 14338480 - 14338543
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaatt 100  Q
    |||||||||| | |||||||||||||||| |||||||||||  |||| || |||||||||||||    
T  14338480 acggagggaccattttgatggacgtctgtgaaattcagggatgaattagacatttcgcaaaatt 14338543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 18645104 - 18645146
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| ||||||||||||||||||||||||||||| |||||    
T  18645104 aaattcatggactaatttgatatttcgcaaaattcagagacga 18645146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 13610771 - 13610739
Alignment:
Q  75 ggactaatttgatatttcgcaaaattcagggac 107  Q
    |||||||||||||||||||||||||||||||||    
T  13610771 ggactaatttgatatttcgcaaaattcagggac 13610739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 11355348 - 11355269
Alignment:
Q  30 cttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||| ||||||||||| | |||| ||| ||||||||||||||||||| | | | ||||||||  ||||||||| |||||    
T  11355348 cttttggacggagggaccattttggtggccgtctgtaaaattcagggagttaatagatatttcataaaattcagtgacga 11355269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 4641474 - 4641402
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||   ||||||||| |||||  ||||||||||| ||| |||||||||| || |||| ||||||||    
T  4641474 acggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacga 4641402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 34343969 - 34343929
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtc 62  Q
    |||| |||||||| |||||||||||||| ||||||||||||    
T  34343969 taacggaccttttggacggagggacgaaattgatggacgtc 34343929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 6e-31; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 40560370 - 40560270
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | ||||||| ||||| ||||||||||| | |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  40560370 acatcatcaccactaacagaacttttggacggagggactattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacg 40560271  T
Q  109 a 109  Q
    |    
T  40560270 a 40560270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 6785978 - 6786078
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||||||| ||||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||  | |||| |||||||    
T  6785978 acatcatcactgttaacagacattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattaagggacg 6786077  T
Q  109 a 109  Q
    |    
T  6786078 a 6786078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 37020655 - 37020557
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    ||||||||||||||||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||||||||||||||||||  |||||||| ||||    
T  37020655 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcaaaaaattcaaggac 37020557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 16763210 - 16763123
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||  |||| ||||||||||| | |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  16763210 taacagagattttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacga 16763123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 24208061 - 24208139
Alignment:
Q  31 ttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  24208061 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaataattcagggacga 24208139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 39664745 - 39664845
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | |||| || ||||| ||||||||||| | |||||||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||    
T  39664745 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgtaaaattcggggacg 39664844  T
Q  109 a 109  Q
    |    
T  39664845 a 39664845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 2767081 - 2766981
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||| | |||| || ||||| ||| ||||||| | |||||| ||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  2767081 acatcatcaccactaacggagcttttggacagagggaccattttgatagacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 2766982  T
Q  109 a 109  Q
    |    
T  2766981 a 2766981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 14389081 - 14389181
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    |||||||||||| ||||  | ||||| ||||||||||| | |||||||||| | || |||||||||||||||| | ||||||||||||||||||||||||    
T  14389081 acatcatcactactaacgaaacttttggacggagggaccattttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacg 14389180  T
Q  109 a 109  Q
    |    
T  14389181 a 14389181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 19908246 - 19908341
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    ||||||| | |||| || ||||| ||||||||||| | ||||| |||||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  19908246 tcatcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggac 19908341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 44709763 - 44709838
Alignment:
Q  30 cttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggg 105  Q
    ||||| ||||||||||| | |||||||||||||||||||||||||||||||| | | |||||||||||||||||||    
T  44709763 cttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagttatttcgcaaaattcaggg 44709838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 6797654 - 6797554
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 108  Q
    ||||||||||   ||||||| ||||| |||||||| || | |||||| ||||||||||||||| ||||||||| | |||||||||||||||||||| |||    
T  6797654 acatcatcacccgtaacagagcttttggacggaggaaccattttgatagacgtctgtaaaattaagggactaaatagatatttcgcaaaattcaggaacg 6797555  T
Q  109 a 109  Q
    |    
T  6797554 a 6797554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 16377197 - 16377292
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    ||||||| | |||| || ||||| ||||||||||| | |||||||||||| ||||||||||| ||||||| | ||||||| |||||||||||||||    
T  16377197 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaatagatattttgcaaaattcagggac 16377292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 42519202 - 42519291
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaa 98  Q
    |||||||||| | |||| || ||||| || |||||||| | |||||||||||||||||||||||||||||||| | ||||||| ||||||    
T  42519202 acatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaa 42519291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 16764611 - 16764653
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16764611 aaattcagggactaatttgatatttcgcaaaattcagggacga 16764653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 17696353 - 17696256
Alignment:
Q  9 acatcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||| | |||| || ||||| ||||||| ||| | |||||| ||||| ||||||||||||||||||| | |||||||  |||||||||||||    
T  17696353 acatcatcaccactaacggagcttttggacggagtgaccattttgattgacgtttgtaaaattcagggactaaatagatattttccaaaattcaggga 17696256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 24205717 - 24205645
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||| |||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||    
T  24205717 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacga 24205645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 37022155 - 37022227
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||| |||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||    
T  37022155 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacga 37022227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 38148630 - 38148559
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    ||||||||||||| |||||| ||||||| ||||||||||||    |||||||||||||| ||||||||||||    
T  38148630 taacagaccttttggacggatggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcg 38148559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 39455288 - 39455221
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagg 104  Q
    |||||| ||| | |||||||||||||||||||||||| ||||||| | ||||||| ||||||||||||    
T  39455288 acggagagaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcagg 39455221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 14387438 - 14387396
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  14387438 aaattcagggactaatttgatatttcgtaaaattcagggacga 14387396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 26584821 - 26584894
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||| ||||||||||||||||| | ||||| ||||| ||||||||||||| | ||| || ||||||||    
T  26584821 gacggagggatgaatttgatggacgtctattaaattgagggattaatttgatattttgaaaacttgagggacga 26584894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 2577450 - 2577522
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||| |||||||| ||| | |   ||||||||||||||||||||||||||  |||||||||||||||    
T  2577450 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcaaaaaattcagggacga 2577522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 37417379 - 37417323
Alignment:
Q  50 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||| |||| |||||    
T  37417379 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgaggga 37417323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 11023003 - 11023074
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||| |||||||| |||||||||||| | ||||||||||||    |||||||||||||| ||||||||||||    
T  11023003 taacggaccttttggacggagggacggaattgatggacgtcaaacaaattcagggactattttgatatttcg 11023074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 29909664 - 29909735
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 107  Q
    |||||||||||   |||||||||||||||  ||||| ||||||||| ||||||||||||| |||| ||||||    
T  29909664 gacggagggacctttttgatggacgtctgacaaattaagggactaaattgatatttcgcataattgagggac 29909735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 4046413 - 4046360
Alignment:
Q  39 ggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttc 92  Q
    ||||||| |||||||||||||| |||| ||||| || |||||||||||||||||    
T  4046413 ggagggatgaatttgatggacgactgttaaatttagagactaatttgatatttc 4046360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 11315339 - 11315396
Alignment:
Q  36 gacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    ||||||||||| | |||||||||||||||  ||||||||| |||| ||||||||||||    
T  11315339 gacggagggaccattttgatggacgtctgacaaattcaggaactattttgatatttcg 11315396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 15432434 - 15432378
Alignment:
Q  50 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    |||||||||||||||  |||||||| |||||| ||||||||||||| |||| |||||    
T  15432434 tttgatggacgtctgacaaattcagagactaaattgatatttcgcataattgaggga 15432378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 17946228 - 17946140
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgat 110  Q
    |||| |||||||| ||||||||||| | |||||||||| |  |  |||||||||||| || ||||||||| |||||||| | |||||||    
T  17946228 taacggaccttttggacggagggaccattttgatggacatgagagaaattcagggacaaaattgatattttgcaaaatttaaggacgat 17946140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 28246797 - 28246726
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||| |||||||| ||| |||||||||| ||||||||||||    ||||||||| |||| ||||||||||||    
T  28246797 taacggaccttttggacagagggacgaaattgatggacgtcaaacaaattcaggaactattttgatatttcg 28246726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 39415 - 39465
Alignment:
Q  50 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaatt 100  Q
    ||||||| |||||||  ||||||||||||||| ||||||||||||| ||||    
T  39415 tttgatgaacgtctgacaaattcagggactaagttgatatttcgcataatt 39465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 361589 - 361495
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggga 106  Q
    ||||||| |||||||||  | || ||| ||||||| || ||||||||||||||   ||||||  ||||||||||||||||| || |||| |||||    
T  361589 tcatcaccattaacagatatattggacagagggactaaattgatggacgtctgacgaattcaatgactaatttgatatttcacataattgaggga 361495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 6783453 - 6783411
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||||||||||||| | | |||||||||||||    
T  6783453 aaattcagggactaatttgatattttgaataattcagggacga 6783411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 7744177 - 7744099
Alignment:
Q  22 taacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaatt 100  Q
    |||| |||||||| || |||||||| | |||||||||| |  |  |||||||||||| || ||||||||||||||||||    
T  7744177 taacggaccttttggatggagggaccattttgatggacatgagagaaattcagggacgaaattgatatttcgcaaaatt 7744099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 40561878 - 40561920
Alignment:
Q  67 aaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||||||||||| |||||| |||||||||| |||||    
T  40561878 aaattcagggactaatttgctatttcacaaaattcagagacga 40561920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 15372618 - 15372550
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcaggg 105  Q
    ||||||||||   |||||||||||||||  ||||||||||| ||| ||||||||| ||| |||| ||||    
T  15372618 acggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcataattgaggg 15372550  T

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Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 41706658 - 41706586
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||   ||||||||||||  |  ||||||||||| ||| ||||||||||||| |||| ||||||||    
T  41706658 acggagggacctttttgatggacgttcgataaattcagggattaaattgatatttcgcataattgagggacga 41706586  T

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Target: scaffold1454 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 1407 - 1310
Alignment:
Q  12 tcatcactattaacagaccttttagacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||| | |||| || ||||| ||||||||||| | |||||||||||||||||||||||||||||||| | ||||||||  |||||||| ||||||    
T  1407 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcataaaattcatggacga 1310  T

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Target: scaffold0081 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 54228 - 54300
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||| |||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||    
T  54228 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacga 54300  T

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Target: scaffold1712 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 1101 - 1029
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    |||||||||| |||||||| ||| | |   |||||||||||||| |||||||||||| | |||||||||||||    
T  1101 acggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacga 1029  T

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Target: scaffold0477 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 6639 - 6711
Alignment:
Q  37 acggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 109  Q
    ||||||||||   ||||||||| |||||  ||||||||||| ||| |||||||||| || |||| ||||||||    
T  6639 acggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacga 6711  T

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