View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13044_low_31 (Length: 311)

Name: NF13044_low_31
Description: NF13044
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13044_low_31
NF13044_low_31
[»] chr6 (46 HSPs)
chr6 (13-117)||(31681892-31681997)
chr6 (180-295)||(31673574-31673689)
chr6 (99-173)||(7996378-7996452)
chr6 (99-173)||(8022349-8022423)
chr6 (95-175)||(20371106-20371186)
chr6 (99-184)||(9629357-9629442)
chr6 (86-167)||(13364692-13364773)
chr6 (92-189)||(33001282-33001379)
chr6 (92-161)||(30851599-30851666)
chr6 (86-167)||(19040343-19040424)
chr6 (93-185)||(426508-426600)
chr6 (93-173)||(5732504-5732584)
chr6 (94-174)||(7265588-7265668)
chr6 (92-160)||(7377977-7378045)
chr6 (99-158)||(9025494-9025553)
chr6 (99-150)||(9617442-9617493)
chr6 (94-161)||(21924930-21924997)
chr6 (99-185)||(9027151-9027237)
chr6 (101-189)||(9658848-9658936)
chr6 (99-166)||(26562681-26562748)
chr6 (92-186)||(8776966-8777060)
chr6 (99-185)||(9107370-9107456)
chr6 (99-185)||(10294080-10294166)
chr6 (99-205)||(12696277-12696383)
chr6 (104-150)||(30866149-30866195)
chr6 (131-172)||(677823-677864)
chr6 (100-173)||(7938101-7938174)
chr6 (99-184)||(34073347-34073432)
chr6 (92-185)||(34595107-34595200)
chr6 (99-175)||(3398602-3398677)
chr6 (86-157)||(31579214-31579283)
chr6 (132-172)||(32839679-32839719)
chr6 (101-156)||(7086797-7086852)
chr6 (99-158)||(7723250-7723309)
chr6 (100-175)||(13851719-13851794)
chr6 (99-158)||(32320669-32320728)
chr6 (99-173)||(16766682-16766756)
chr6 (101-175)||(26178683-26178757)
chr6 (92-149)||(7740650-7740707)
chr6 (99-172)||(16488590-16488663)
chr6 (106-167)||(17341671-17341732)
chr6 (100-173)||(19044449-19044522)
chr6 (104-149)||(26314639-26314684)
chr6 (101-150)||(32299283-32299332)
chr6 (99-159)||(9195754-9195814)
chr6 (105-153)||(21142123-21142171)
[»] chr3 (35 HSPs)
chr3 (93-184)||(8383231-8383322)
chr3 (94-161)||(25093499-25093566)
chr3 (106-175)||(32804547-32804616)
chr3 (99-169)||(8039835-8039905)
chr3 (99-185)||(15796294-15796380)
chr3 (86-186)||(26492192-26492292)
chr3 (93-160)||(7614409-7614476)
chr3 (93-160)||(7928448-7928515)
chr3 (94-152)||(21419450-21419508)
chr3 (92-158)||(24633394-24633460)
chr3 (100-150)||(40150572-40150622)
chr3 (92-148)||(8789543-8789599)
chr3 (110-158)||(9624641-9624689)
chr3 (99-175)||(25948887-25948963)
chr3 (94-174)||(48202264-48202344)
chr3 (99-170)||(10455778-10455849)
chr3 (132-175)||(12674534-12674577)
chr3 (92-151)||(32652036-32652095)
chr3 (86-157)||(45451554-45451625)
chr3 (99-166)||(49651786-49651853)
chr3 (94-128)||(13414499-13414533)
chr3 (86-128)||(40993322-40993364)
chr3 (107-160)||(11313808-11313861)
chr3 (100-157)||(13807170-13807227)
chr3 (107-160)||(16192758-16192811)
chr3 (101-150)||(17005621-17005670)
chr3 (105-150)||(29508452-29508497)
chr3 (99-128)||(35222968-35222997)
chr3 (93-150)||(49505148-49505205)
chr3 (92-140)||(2941576-2941624)
chr3 (99-206)||(8587021-8587129)
chr3 (92-140)||(13845518-13845566)
chr3 (105-185)||(24205047-24205127)
chr3 (98-150)||(48353730-48353782)
chr3 (92-207)||(55401025-55401141)
[»] chr8 (28 HSPs)
chr8 (100-159)||(12606830-12606889)
chr8 (92-166)||(31236570-31236644)
chr8 (100-212)||(4298887-4298999)
chr8 (99-161)||(11927086-11927148)
chr8 (94-166)||(13844591-13844663)
chr8 (99-161)||(11944662-11944724)
chr8 (99-172)||(4786338-4786411)
chr8 (95-195)||(24669396-24669496)
chr8 (99-175)||(31109518-31109594)
chr8 (86-154)||(33405371-33405439)
chr8 (92-150)||(14134707-14134765)
chr8 (99-185)||(22651949-22652035)
chr8 (104-166)||(27213539-27213601)
chr8 (109-175)||(29776019-29776085)
chr8 (101-158)||(11803259-11803316)
chr8 (94-159)||(34897084-34897149)
chr8 (94-150)||(12985400-12985456)
chr8 (101-185)||(29510306-29510390)
chr8 (114-185)||(4673440-4673511)
chr8 (106-157)||(8798838-8798889)
chr8 (100-175)||(28384995-28385070)
chr8 (92-150)||(3025559-3025617)
chr8 (92-186)||(20873041-20873135)
chr8 (99-175)||(15816129-15816205)
chr8 (100-172)||(20679396-20679468)
chr8 (106-166)||(24362209-24362269)
chr8 (99-163)||(25172698-25172762)
chr8 (102-166)||(39954282-39954346)
[»] chr5 (33 HSPs)
chr5 (99-173)||(3966488-3966562)
chr5 (87-171)||(28588662-28588746)
chr5 (86-150)||(30502375-30502439)
chr5 (86-150)||(30542718-30542782)
chr5 (86-172)||(23012395-23012480)
chr5 (132-205)||(26716097-26716170)
chr5 (132-205)||(26985837-26985910)
chr5 (99-175)||(16203795-16203871)
chr5 (92-199)||(26312727-26312835)
chr5 (99-171)||(32630735-32630807)
chr5 (94-185)||(21191051-21191142)
chr5 (95-172)||(34276858-34276934)
chr5 (94-150)||(17925167-17925223)
chr5 (132-172)||(19429418-19429458)
chr5 (99-172)||(11685925-11685998)
chr5 (86-158)||(18421828-18421900)
chr5 (98-174)||(30098310-30098386)
chr5 (99-159)||(39205879-39205939)
chr5 (86-166)||(42029744-42029824)
chr5 (99-150)||(6471889-6471940)
chr5 (100-147)||(15086482-15086529)
chr5 (94-207)||(19820391-19820503)
chr5 (99-150)||(22423812-22423863)
chr5 (99-158)||(41091257-41091316)
chr5 (99-172)||(6035469-6035541)
chr5 (94-123)||(15874197-15874226)
chr5 (99-172)||(21814247-21814320)
chr5 (99-172)||(31084309-31084382)
chr5 (107-160)||(32766951-32767004)
chr5 (93-146)||(34879362-34879415)
chr5 (101-166)||(38749565-38749630)
chr5 (93-185)||(6247595-6247687)
chr5 (99-163)||(18592068-18592132)
[»] chr2 (38 HSPs)
chr2 (92-167)||(37411237-37411312)
chr2 (100-185)||(18276494-18276579)
chr2 (102-207)||(23717977-23718082)
chr2 (102-207)||(24105649-24105754)
chr2 (86-186)||(30404837-30404937)
chr2 (103-157)||(30527599-30527653)
chr2 (93-150)||(34691799-34691856)
chr2 (93-150)||(34714211-34714268)
chr2 (106-167)||(35449504-35449565)
chr2 (99-210)||(20539674-20539786)
chr2 (87-150)||(5367200-5367263)
chr2 (87-150)||(18570980-18571043)
chr2 (101-167)||(18420436-18420502)
chr2 (101-167)||(39279666-39279732)
chr2 (94-167)||(896202-896275)
chr2 (101-165)||(4332919-4332981)
chr2 (93-207)||(19536391-19536507)
chr2 (106-158)||(19614183-19614235)
chr2 (107-175)||(21616745-21616813)
chr2 (92-128)||(34993975-34994011)
chr2 (99-175)||(37558960-37559036)
chr2 (92-175)||(15972856-15972939)
chr2 (108-175)||(16069263-16069330)
chr2 (99-150)||(44860328-44860379)
chr2 (95-160)||(1327976-1328039)
chr2 (113-167)||(21782832-21782886)
chr2 (118-160)||(27084260-27084302)
chr2 (92-161)||(31284045-31284115)
chr2 (86-160)||(31808075-31808149)
chr2 (101-150)||(6045918-6045967)
chr2 (94-175)||(18421946-18422027)
chr2 (101-150)||(44605141-44605190)
chr2 (100-207)||(14996224-14996332)
chr2 (94-206)||(20242722-20242834)
chr2 (99-159)||(24975325-24975385)
chr2 (99-143)||(35056883-35056927)
chr2 (100-144)||(37491856-37491900)
chr2 (92-172)||(42205828-42205908)
[»] chr7 (36 HSPs)
chr7 (102-172)||(3520345-3520415)
chr7 (94-172)||(7197292-7197370)
chr7 (99-175)||(1433437-1433513)
chr7 (100-167)||(7438697-7438764)
chr7 (94-160)||(20549789-20549855)
chr7 (99-167)||(22602710-22602778)
chr7 (99-209)||(27944989-27945100)
chr7 (99-172)||(21138996-21139066)
chr7 (99-173)||(24339627-24339701)
chr7 (99-173)||(32308105-32308179)
chr7 (99-172)||(6630912-6630985)
chr7 (99-148)||(9482944-9482993)
chr7 (101-186)||(15902794-15902879)
chr7 (100-161)||(19206047-19206108)
chr7 (100-165)||(23948385-23948450)
chr7 (99-172)||(26329382-26329455)
chr7 (99-163)||(5548671-5548735)
chr7 (100-160)||(24146814-24146874)
chr7 (103-175)||(38134410-38134482)
chr7 (105-185)||(43249966-43250046)
chr7 (101-156)||(3142080-3142135)
chr7 (110-161)||(10377504-10377555)
chr7 (99-158)||(16341496-16341555)
chr7 (92-175)||(26733287-26733370)
chr7 (93-175)||(3721077-3721158)
chr7 (101-175)||(21828407-21828481)
chr7 (92-150)||(26022542-26022600)
chr7 (113-175)||(29787383-29787445)
chr7 (99-172)||(7328691-7328764)
chr7 (101-150)||(23128663-23128712)
chr7 (134-207)||(24105629-24105702)
chr7 (92-173)||(25481887-25481968)
chr7 (134-211)||(30813759-30813836)
chr7 (111-172)||(48246825-48246886)
chr7 (86-150)||(21880160-21880224)
chr7 (99-151)||(35297672-35297724)
[»] chr1 (37 HSPs)
chr1 (93-175)||(9709803-9709885)
chr1 (86-172)||(36878447-36878533)
chr1 (99-175)||(6427333-6427409)
chr1 (101-160)||(1864882-1864941)
chr1 (94-207)||(39130762-39130876)
chr1 (93-175)||(52903232-52903314)
chr1 (86-166)||(21530681-21530761)
chr1 (86-207)||(38078648-38078771)
chr1 (100-160)||(38503318-38503378)
chr1 (94-158)||(40181871-40181935)
chr1 (92-175)||(46348376-46348459)
chr1 (92-174)||(37598816-37598897)
chr1 (132-185)||(15641063-15641116)
chr1 (109-146)||(27966008-27966045)
chr1 (99-148)||(44482240-44482289)
chr1 (93-161)||(13436455-13436523)
chr1 (94-166)||(30847715-30847787)
chr1 (106-185)||(398772-398851)
chr1 (100-175)||(2896122-2896197)
chr1 (99-150)||(7918211-7918262)
chr1 (101-172)||(13997869-13997940)
chr1 (100-167)||(19562622-19562689)
chr1 (99-185)||(5927340-5927426)
chr1 (99-185)||(6612171-6612257)
chr1 (92-150)||(14332635-14332693)
chr1 (92-166)||(29163374-29163448)
chr1 (99-148)||(25361896-25361945)
chr1 (99-180)||(34712383-34712464)
chr1 (99-167)||(1486709-1486777)
chr1 (99-159)||(9629900-9629960)
chr1 (87-127)||(19637799-19637839)
chr1 (99-159)||(20157350-20157410)
chr1 (107-190)||(25098563-25098647)
chr1 (93-173)||(31672889-31672969)
chr1 (99-143)||(34371728-34371772)
chr1 (99-159)||(38075970-38076030)
chr1 (99-175)||(42359449-42359525)
[»] scaffold0652 (1 HSPs)
scaffold0652 (92-175)||(455-538)
[»] scaffold0223 (1 HSPs)
scaffold0223 (99-209)||(20120-20231)
[»] scaffold0036 (1 HSPs)
scaffold0036 (99-166)||(9747-9814)
[»] scaffold0020 (1 HSPs)
scaffold0020 (99-160)||(135312-135373)
[»] scaffold0697 (1 HSPs)
scaffold0697 (86-166)||(1636-1716)
[»] scaffold0110 (1 HSPs)
scaffold0110 (101-161)||(28847-28907)
[»] chr4 (27 HSPs)
chr4 (106-150)||(3712516-3712560)
chr4 (99-175)||(40742574-40742650)
chr4 (132-207)||(12628618-12628693)
chr4 (99-166)||(35952617-35952684)
chr4 (132-178)||(18743860-18743906)
chr4 (99-172)||(35723384-35723458)
chr4 (92-185)||(23292979-23293072)
chr4 (92-160)||(8423711-8423779)
chr4 (99-175)||(13783264-13783340)
chr4 (100-151)||(5775359-5775410)
chr4 (86-185)||(21945476-21945575)
chr4 (108-159)||(22440609-22440660)
chr4 (104-167)||(40613441-40613504)
chr4 (86-169)||(48139253-48139336)
chr4 (92-190)||(49430993-49431092)
chr4 (109-175)||(903905-903971)
chr4 (100-150)||(7214523-7214573)
chr4 (100-150)||(33950144-33950194)
chr4 (106-152)||(44081584-44081630)
chr4 (92-150)||(54580016-54580074)
chr4 (99-172)||(15029751-15029824)
chr4 (111-172)||(21539879-21539940)
chr4 (86-151)||(40179623-40179688)
chr4 (113-158)||(56257933-56257978)
chr4 (99-207)||(3947766-3947874)
chr4 (100-160)||(9996838-9996898)
chr4 (103-159)||(26504303-26504359)
[»] scaffold0027 (1 HSPs)
scaffold0027 (98-185)||(46655-46742)
[»] scaffold0050 (1 HSPs)
scaffold0050 (92-166)||(70270-70344)
[»] scaffold0011 (1 HSPs)
scaffold0011 (100-150)||(240022-240072)
[»] scaffold0053 (1 HSPs)
scaffold0053 (92-185)||(8771-8864)
[»] scaffold0018 (1 HSPs)
scaffold0018 (134-195)||(192284-192345)
[»] scaffold0171 (1 HSPs)
scaffold0171 (99-207)||(23371-23479)
[»] scaffold0168 (1 HSPs)
scaffold0168 (103-175)||(21026-21098)
[»] scaffold0008 (1 HSPs)
scaffold0008 (99-175)||(263372-263448)
[»] scaffold0007 (1 HSPs)
scaffold0007 (105-185)||(225274-225354)
[»] scaffold0376 (1 HSPs)
scaffold0376 (99-158)||(6312-6371)
[»] scaffold0116 (1 HSPs)
scaffold0116 (99-166)||(9890-9957)
[»] scaffold0022 (2 HSPs)
scaffold0022 (100-151)||(90850-90901)
scaffold0022 (99-166)||(99885-99952)


Alignment Details
Target: chr6 (Bit Score: 98; Significance: 3e-48; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 31681997 - 31681892
Alignment:
Q  13 aatattgacagttaatttgagattggacggctcatattactcggtgcaaaatcaataagtggtagaaagtctgcatgtttcgtgttcgacacc-gacaca 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31681997 aatattgacagttaatttgagattggacggctcatattactcggtgcaaaatcaataagtggtagaaagtctgcatgtttcgtgttcgacaccagacaca 31681898  T
Q  112 tataat 117  Q
    ||||||    
T  31681897 tataat 31681892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 180 - 295
Target Start/End: Original strand, 31673574 - 31673689
Alignment:
Q  180 tgtccgtgtccatatctgtgcgtcataggtttttagggattagcaagttgggggtgcatgaccattctttcgcctgtgcttaaagggtgtctttgggaag 279  Q
    ||||||||||| |||| ||||  || | || |||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  31673574 tgtccgtgtccgtatccgtgctccacatgtgtttaggaattagcaagttgggtgtgcatgaccattcttttgcctgtgcttaaagggtgtctttgggaag 31673673  T
Q  280 ggaaattgaaatggaa 295  Q
    ||| ||||||||||||    
T  31673674 ggagattgaaatggaa 31673689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 7996378 - 7996452
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtcc 173  Q
    |||||||||| |||||||||||| ||||||  |||||||||||||||||||| |||||||||||||||| |||||    
T  7996378 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtcc 7996452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 8022423 - 8022349
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtcc 173  Q
    |||||||||| |||||||||||| ||||||  |||||||||||||||||||| |||||||||||||||| |||||    
T  8022423 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtcc 8022349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 20371106 - 20371186
Alignment:
Q  95 tgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    ||||||||||||||||||||||| ||||||| ||   ||||||||||||||||||| | |||||||| |||||||||||||    
T  20371106 tgttcgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgt 20371186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 9629442 - 9629357
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtcc 184  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||||||  | |||||||| ||||||| ||||| || |||||    
T  9629442 cgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtcc 9629357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 167
Target Start/End: Original strand, 13364692 - 13364773
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtca 167  Q
    ||||| |||||| | |||||||||||||| |||||| ||||||  |||||||||||||||||| | ||||||||||||||||    
T  13364692 catgtatcgtgtccaacaccgacacatatgattacactgaattatatgattttctcaaattataagcagtgtcggcatgtca 13364773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 189
Target Start/End: Original strand, 33001282 - 33001379
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgtgtc 189  Q
    |||||| ||||||||||||||||||||||||| ||||   ||||||| ||||||||||| |||||||||| ||||| || |||| |  ||||||||||    
T  33001282 tcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtcattgaccgtgttgtgtccgtgtc 33001379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 30851666 - 30851599
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggc 161  Q
    |||||| ||||||||||||||||||||||||||||||   ||||||||| ||||||||| ||||||||||    
T  30851666 tcgtgtccgacaccgacacatataattacattgaatt--gtgattttcttaaattattagcagtgtcggc 30851599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 86 - 167
Target Start/End: Complemental strand, 19040424 - 19040343
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtca 167  Q
    ||||| |||||| |||||| |||||||||||||||| ||||||   ||||||||||||||||||| | |||||||| |||||    
T  19040424 catgtgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtca 19040343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 426508 - 426600
Alignment:
Q  93 cgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    ||||| |||||||||||| | |||||||||| ||||   ||||||| ||||||||||||| |||||||| ||||| ||||||| || ||||||    
T  426508 cgtgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccg 426600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 5732504 - 5732584
Alignment:
Q  93 cgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtcc 173  Q
    ||||| ||||||||||||||||||||||| | || |   ||||||||||||||||||||| |||||||| ||||| |||||    
T  5732504 cgtgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtcc 5732584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 7265588 - 7265668
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccg 174  Q
    |||| ||||||||||||||||||||||| ||||||   ||||||||||||||||||| | |||| ||| ||||| ||||||    
T  7265588 gtgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 7378045 - 7377977
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcgg 160  Q
    |||||| ||||||||||||||||||||||||||||||   ||||||||||||||| ||| | |||||||    
T  7378045 tcgtgtccgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtcgg 7377977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 9025494 - 9025553
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtc 158  Q
    ||||||||||||||||||||||| ||||||   ||||||||||||||||||| |||||||    
T  9025494 cgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 9617493 - 9617442
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  9617493 cgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 21924930 - 21924997
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggc 161  Q
    |||| ||||||||||||||||||||||| ||||||   |||| |||||||||||||| ||||||||||    
T  21924930 gtgtccgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtcggc 21924997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 9027237 - 9027151
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    |||||||||||||||||||||||  |||||   ||||| ||||||||||||| | |||||||| ||||| ||||||| || ||||||    
T  9027237 cgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccg 9027151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 9658936 - 9658848
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgtgtc 189  Q
    ||||||||| ||||||||||| ||||||   ||||||||| ||||||||| | |||||||| ||||| ||||||| || |||| |||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtctgtgtc 9658848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 26562748 - 26562681
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtc 166  Q
    ||||| ||||||||||||||||| ||||||   ||||||||||||||| ||| |||||||||| ||||    
T  26562748 cgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtc 26562681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 8776966 - 8777060
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgt 186  Q
    |||||| ||||||| |||| | |||||||| |||||||  ||||||| |||||||||||   |||||||| ||||| ||||||| || |||||||    
T  8776966 tcgtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgt 8777060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 9107370 - 9107456
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    |||||||||||| | |||||||| |||||||  ||||||| ||||||||||| | |||||||| ||| | ||||||| || ||||||    
T  9107370 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccg 9107456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 10294166 - 10294080
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    |||||||||||||||||||||||||||| |    |||| ||||||||||||| | || ||||||||||| | ||||| || ||||||    
T  10294166 cgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgtccg 10294080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 205
Target Start/End: Complemental strand, 12696383 - 12696277
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgtgtccatatctgt 198  Q
    |||||| ||||| | |||||||| ||||||   | ||||| ||||||||||| | |||||||| ||||| ||||||| || ||||||||||| |||| ||    
T  12696383 cgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgtgtccgtatccgt 12696284  T
Q  199 gcgtcat 205  Q
    || ||||    
T  12696283 gcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 30866149 - 30866195
Alignment:
Q  104 ccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    |||||||||||||||||||||||||   |||||||||||||||||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattatta 30866195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 677864 - 677823
Alignment:
Q  131 atgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    ||||||||||||||||||||||||||||||| ||||| ||||    
T  677864 atgattttctcaaattattaacagtgtcggcgtgtcagtgtc 677823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 7938174 - 7938101
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtcc 173  Q
    ||||||||||| |||||||||| | ||||  |||||||| ||||||||||| | |||||||| ||||| |||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 7938101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 34073347 - 34073432
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtcc 184  Q
    |||||||||| |||||||||||| ||||||    |||||||||||||||||| |  ||| ||||||||| ||||||| || |||||    
T  34073347 cgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtcc 34073432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 34595200 - 34595107
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    |||||| |||||||||||| | |||||||| ||||||   ||||||| |||||||||||   |||||||| ||||| ||||||| || ||||||    
T  34595200 tcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccg 34595107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 3398677 - 3398602
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    ||||||||| || |||||||||| ||||||  |||||||| ||||||||||| | |||||||| ||||| |||||||    
T  3398677 cgacaccgatacttataattacactgaattatatgatttt-tcaaattattagctgtgtcggcgtgtcagtgtccgt 3398602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 31579214 - 31579283
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgt 157  Q
    ||||| |||||| |||||||||||||||  |||||| ||||||   ||||||||||||||||||||| ||||    
T  31579214 catgtgtcgtgtccgacaccgacacata--attacactgaattatgtgattttctcaaattattaacggtgt 31579283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 32839679 - 32839719
Alignment:
Q  132 tgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  32839679 tgattttctcaaattattaacagtgtcagcatgtcgatgtc 32839719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 7086852 - 7086797
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattattaacagtg 156  Q
    ||||||||||||||||||||| | ||||   ||||||||||||||||||| |||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattattagcagtg 7086797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 7723250 - 7723309
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtc 158  Q
    ||||||||| |||||||||||   ||||||  |||||||||||||||||||| |||||||    
T  7723250 cgacaccgatacatataattatgctgaattatatgattttctcaaattattagcagtgtc 7723309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 13851794 - 13851719
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||| ||||||||||||||||| ||||||   | ||||||||||||||||| | |||||| | ||||| |||||||    
T  13851794 gacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgt 13851719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 32320669 - 32320728
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtc 158  Q
    ||||||||| ||||||||| ||||||||||   ||||||| ||||||||||||| |||||    
T  32320669 cgacaccgatacatataatgacattgaattatgtgattttatcaaattattaacggtgtc 32320728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 16766756 - 16766682
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtcc 173  Q
    |||||||||||| | |||||||| ||||||   ||||||| ||||||||||| | |||||||| ||||| |||||    
T  16766756 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 16766682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 26178683 - 26178757
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||||||||||||| |||||| | ||||   ||||||| |||||||||||  |||| |||| |||||||||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattttatcaaattattagaagtgacggcttgtcaatgtccgt 26178757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 7740707 - 7740650
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattatt 149  Q
    |||||| |||||| |||||||||||||||| | |||||  |||||||| |||||||||    
T  7740707 tcgtgtccgacactgacacatataattacactcaattttgtgattttcacaaattatt 7740650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 16488590 - 16488663
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    ||||||||||||||||||||||| || ||||  ||||||||| |||  |||| | |||||||| |||| |||||    
T  16488590 cgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccatgtc 16488663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 17341671 - 17341732
Alignment:
Q  106 gacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtca 167  Q
    ||||| |||||||||| ||||||   ||||||| ||||||||||||| |||||||| |||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtca 17341732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 19044522 - 19044449
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtcc 173  Q
    |||||||||||||||||| ||| ||||||   |||| ||||||||||||||   |||||||| ||||| |||||    
T  19044522 gacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtcc 19044449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 26314639 - 26314684
Alignment:
Q  104 ccgacacatataattacattgaatttaatgattttctcaaattatt 149  Q
    |||||| ||||||||||||||||||  |||||||| ||||||||||    
T  26314639 ccgacatatataattacattgaattatatgattttttcaaattatt 26314684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 32299332 - 32299283
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    |||||||||| ||||| |||||||||||   |||||||||||||||||||    
T  32299332 acaccgacacgtataactacattgaattatgtgattttctcaaattatta 32299283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 9195754 - 9195814
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcg 159  Q
    ||||||||||||||||||||||| | ||||   | |||||||||||||||||  |||||||    
T  9195754 cgacaccgacacatataattacactaaattatgtcattttctcaaattattaggagtgtcg 9195814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 21142171 - 21142123
Alignment:
Q  105 cgacacatataattacattgaatttaatgattttctcaaattattaaca 153  Q
    |||||||||||| || | ||||||  |||||||||||||||||||||||    
T  21142171 cgacacatataactagactgaattatatgattttctcaaattattaaca 21142123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 8e-21; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 8383322 - 8383231
Alignment:
Q  93 cgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtcc 184  Q
    ||||| |||||||||||| |||||||||| ||||||  |||||||||||||||||||| | |||||||| ||||||||||||| || |||||    
T  8383322 cgtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtcc 8383231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 25093566 - 25093499
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggc 161  Q
    |||| ||||||||||||||||||||||| ||||||   |||||||||||||| |||||||||||||||    
T  25093566 gtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggc 25093499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 32804547 - 32804616
Alignment:
Q  106 gacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||||||||||||||| | ||||   ||||||||||||||||||||| ||||||||||||||||| ||||    
T  32804547 gacacatataattacactaaattatgtgattttctcaaattattaacggtgtcggcatgtcaatgcccgt 32804616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 8039835 - 8039905
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaat 169  Q
    ||||||||||||||||||||||| ||||||  || ||||||||||||||||| | |||| ||| |||||||    
T  8039835 cgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgttggcgtgtcaat 8039905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 15796294 - 15796380
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    |||||||||||  | |||||||| ||||||  |||||||| ||||||||||||| |||||||| ||||| ||||||| || ||||||    
T  15796294 cgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccg 15796380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 186
Target Start/End: Original strand, 26492192 - 26492292
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    ||||| |||||| ||||||||| || | |||||||| ||||||  |||||||| ||||||||||| |  ||||||| ||||| ||||||| || ||||||    
T  26492192 catgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T
Q  186 t 186  Q
    |    
T  26492292 t 26492292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 7614409 - 7614476
Alignment:
Q  93 cgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcgg 160  Q
    ||||||||||||||||| ||||||||| | ||||||   ||||||||| ||||||||||| |||||||    
T  7614409 cgtgttcgacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcgg 7614476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 7928515 - 7928448
Alignment:
Q  93 cgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcgg 160  Q
    ||||| ||||||||||||||||||||||| ||||||   ||||||| ||||||||||| | |||||||    
T  7928515 cgtgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcgg 7928448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 21419450 - 21419508
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaac 152  Q
    |||||||||||| ||| ||||||||||||||||||  || ||||||| |||||||||||    
T  21419450 gtgttcgacaccaacatatataattacattgaattatattattttcttaaattattaac 21419508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 24633394 - 24633460
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtc 158  Q
    |||||| | ||||||||||||||||||||||||||||   |||||||  |||||||||||| |||||    
T  24633394 tcgtgtccaacaccgacacatataattacattgaattacgtgatttttccaaattattaactgtgtc 24633460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 40150572 - 40150622
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    ||||||||||||||| |||||||||||||  || |||||||||||||||||    
T  40150572 gacaccgacacatatgattacattgaattatatcattttctcaaattatta 40150622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 8789543 - 8789599
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattat 148  Q
    |||||| |||||||||||||||||||||||  |||||   |||||||||||||||||    
T  8789543 tcgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 9624689 - 9624641
Alignment:
Q  110 catataattacattgaatttaatgattttctcaaattattaacagtgtc 158  Q
    |||||||||||||||||||   ||||||||||||||||||| |||||||    
T  9624689 catataattacattgaattatgtgattttctcaaattattagcagtgtc 9624641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 25948887 - 25948963
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    ||||||| |||| |||||||||| ||||||   ||||||| ||||||||||| | || ||||||||||| |||||||    
T  25948887 cgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgt 25948963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 48202264 - 48202344
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccg 174  Q
    ||||| ||||| |||||||||||||||||| ||||   ||||||||||||| |||||    ||||||| ||||||||||||    
T  48202264 gtgtttgacacagacacatataattacattaaattatgtgattttctcaaactattatggatgtcggcgtgtcaatgtccg 48202344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 10455849 - 10455778
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatg 170  Q
    ||||||| ||||||||||||||| | | ||  |||||||||||| ||||||| |||||| ||| ||||||||    
T  10455849 cgacaccaacacatataattacacttagttatatgattttctcatattattagcagtgttggcgtgtcaatg 10455778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 175
Target Start/End: Original strand, 12674534 - 12674577
Alignment:
Q  132 tgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    ||||||||||||||||||| |||||||||  |||||||||||||    
T  12674534 tgattttctcaaattattagcagtgtcggtgtgtcaatgtccgt 12674577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 32652036 - 32652095
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaa 151  Q
    |||||||| |||| ||| |||||||||||| |||| | ||||||||||| ||||||||||    
T  32652036 tcgtgttcaacacggactcatataattacagtgaagtaaatgattttcttaaattattaa 32652095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 45451625 - 45451554
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgt 157  Q
    ||||| |||||| |||||||||||||||| |||| | |||| |   ||||||||||||||||||| ||||||    
T  45451625 catgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattattagcagtgt 45451554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 49651786 - 49651853
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtc 166  Q
    |||||||||||| | |||||||| ||||||   ||||||| ||||||||||| | |||||||||||||    
T  49651786 cgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcggcatgtc 49651853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 13414533 - 13414499
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatt 128  Q
    |||| ||||||||||||||||||||||||||||||    
T  13414533 gtgtccgacaccgacacatataattacattgaatt 13414499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 40993322 - 40993364
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatt 128  Q
    ||||| |||||| ||||||||||||||||||||||| ||||||    
T  40993322 catgtgtcgtgtccgacaccgacacatataattacactgaatt 40993364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 11313808 - 11313861
Alignment:
Q  107 acacatataattacattgaatttaatgattttctcaaattattaacagtgtcgg 160  Q
    ||||||||||||||| | ||||   ||||||||||||||||||| |||||||||    
T  11313808 acacatataattacactaaattatgtgattttctcaaattattagcagtgtcgg 11313861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 13807227 - 13807170
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgt 157  Q
    ||||||||||||||| |||| ||||||||   ||||||||||||||| ||| ||||||    
T  13807227 gacaccgacacatattattatattgaattatgtgattttctcaaattgttatcagtgt 13807170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 16192758 - 16192811
Alignment:
Q  107 acacatataattacattgaatttaatgattttctcaaattattaacagtgtcgg 160  Q
    ||||||||||||||| ||||||   | ||||||||||||||||||| |||||||    
T  16192758 acacatataattacactgaattatgttattttctcaaattattaacggtgtcgg 16192811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 17005621 - 17005670
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    |||||||||| |||||||||| ||||||  |||||||| |||||||||||    
T  17005621 acaccgacacttataattacactgaattatatgattttatcaaattatta 17005670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 29508497 - 29508452
Alignment:
Q  105 cgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    ||||||||||||||||| ||||||  |||||||| |||||||||||    
T  29508497 cgacacatataattacactgaattatatgattttttcaaattatta 29508452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 128
Target Start/End: Complemental strand, 35222997 - 35222968
Alignment:
Q  99 cgacaccgacacatataattacattgaatt 128  Q
    ||||||||||||||||||||||||||||||    
T  35222997 cgacaccgacacatataattacattgaatt 35222968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 49505148 - 49505205
Alignment:
Q  93 cgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    ||||| |||||| |||||||||||||||| | ||||   |||||||||||||||||||    
T  49505148 cgtgtccgacactgacacatataattacactaaattatgtgattttctcaaattatta 49505205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 2941624 - 2941576
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttct 140  Q
    |||||| ||||||||||||||||||||||| || ||||  |||||||||    
T  2941624 tcgtgtccgacaccgacacatataattacactgtattttgtgattttct 2941576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 206
Target Start/End: Original strand, 8587021 - 8587129
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtcc-gtgtccatatctg 197  Q
    |||||||||||| | |||||||| | ||||   ||||||| |||||||| ||   |||||||| ||||| ||||||| || ||||| |||||| ||||||    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgtatctg 8587120  T
Q  198 tgcgtcata 206  Q
    ||| |||||    
T  8587121 tgcttcata 8587129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 13845518 - 13845566
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttct 140  Q
    |||||| ||||||||||||||||||||||| || ||||  |||||||||    
T  13845518 tcgtgtccgacaccgacacatataattacactgcattttgtgattttct 13845566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 24205047 - 24205127
Alignment:
Q  105 cgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    |||||| |||||||||| || |||   | ||||||||||||||||| | |||||||| ||||| ||||||| || ||||||    
T  24205047 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccg 24205127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 48353730 - 48353782
Alignment:
Q  98 tcgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    |||||||||| ||||||||||||| | ||||   |||||||||||||||||||    
T  48353730 tcgacaccgatacatataattacaattaattatttgattttctcaaattatta 48353782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 207
Target Start/End: Complemental strand, 55401141 - 55401025
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtcc-gtgtcc 190  Q
    |||||| |||||||||||| | |||||||| | ||||   ||||||| |||||||||||   |||||||| | ||| ||||||| || | ||| ||||||    
T  55401141 tcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtcc 55401042  T
Q  191 atatctgtgcgtcatag 207  Q
     ||||||||| ||||||    
T  55401041 gtatctgtgcttcatag 55401025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 12606830 - 12606889
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcg 159  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||    
T  12606830 gacaccgacacatataattacattgaattatatgattttctcaaattattagcagtgtcg 12606889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 31236570 - 31236644
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtc 166  Q
    |||||| || |||||||||||||||||||||||||||   ||||||||||||||||||| |||||||||| ||||    
T  31236570 tcgtgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtc 31236644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 4298887 - 4298999
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgtgtccatatctgtg 199  Q
    ||||||||||| | |||||||||| ||||   ||||||| ||||||||||||| |||||||| ||| | | || || || |||||||||||||||| |||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtccgtgtccatatccgtg 4298986  T
Q  200 cgtcataggtttt 212  Q
    | |||||||||||    
T  4298987 cttcataggtttt 4298999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 11927086 - 11927148
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggc 161  Q
    ||||||||||||||||||||||| ||||||   ||||||| ||||||||||||||||||||||    
T  11927086 cgacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcggc 11927148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 13844591 - 13844663
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtc 166  Q
    |||| ||||||||||||||||||||||| | ||||   ||||||||||||||||||| |||||||||| ||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 11944724 - 11944662
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggc 161  Q
    ||||||||||||||||||||||| ||| ||   ||||||| ||||||||||||||||||||||    
T  11944724 cgacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggc 11944662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 4786338 - 4786411
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    ||||||||||||||||||||||| ||||||   ||||||||| ||||||||||  |||||||| ||||| ||||    
T  4786338 cgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtc 4786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 195
Target Start/End: Complemental strand, 24669496 - 24669396
Alignment:
Q  95 tgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgtgtccatat 194  Q
    |||||||||||||||| | |||||||| ||||||   | |||| |||||||||||||| ||||| || ||||| |||| || || ||||||||||| |||    
T  24669496 tgttcgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgtccgtgtccgtat 24669397  T
Q  195 c 195  Q
    |    
T  24669396 c 24669396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 31109518 - 31109594
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||||| |||||||||| ||| | ||||||   ||||||||||||||||||||| |||||||| ||||| |||||||    
T  31109518 cgacactgacacatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgtccgt 31109594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 33405371 - 33405439
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacag 154  Q
    ||||| |||||| ||||||||||||||||||||||| | ||||   || ||||||||||||||||||||    
T  33405371 catgtgtcgtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattattaacag 33405439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 14134765 - 14134707
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    ||||||| |||||||||| ||||||||||| ||||||   |||||||||||||||||||    
T  14134765 tcgtgtttgacaccgacatatataattacactgaattatgtgattttctcaaattatta 14134707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 22652035 - 22651949
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    |||||||||||| | |||||| ||||||||   ||||||| ||||||||||| | |||||||| ||||| ||||||| || ||||||    
T  22652035 cgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 22651949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 27213601 - 27213539
Alignment:
Q  104 ccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtc 166  Q
    |||||||||||||||||| ||||||   ||||||||| ||||||||| |||||||||| ||||    
T  27213601 ccgacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtc 27213539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 29776085 - 29776019
Alignment:
Q  109 acatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    ||||||||||| | ||||||   ||||||||||||||||||| |||||||| | |||||||||||||    
T  29776085 acatataattatactgaattacgtgattttctcaaattattagcagtgtcgacttgtcaatgtccgt 29776019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 158
Target Start/End: Complemental strand, 11803316 - 11803259
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtc 158  Q
    ||||| ||||||||||||||| ||||||   ||||||||| |||||||||||||||||    
T  11803316 acaccaacacatataattacactgaattatgtgattttcttaaattattaacagtgtc 11803259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 34897149 - 34897084
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcg 159  Q
    |||| ||||| ||||||||||||||||| ||||||   ||||||||||||||||||| | ||||||    
T  34897149 gtgtccgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcg 34897084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 12985456 - 12985400
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    |||| ||||||||||| |||| |||||||||||||   |||||||||||||||||||    
T  12985456 gtgtccgacaccgacatatatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 29510306 - 29510390
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    |||||||||| | |||||| | |||||||  ||||||| ||||||||||| | |||||||| ||||| ||||||| || ||||||    
T  29510306 acaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 29510390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 185
Target Start/End: Original strand, 4673440 - 4673511
Alignment:
Q  114 taattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    |||||||| ||||||| |||||||| ||||||||||| | |||||||| ||||| |||| || || ||||||    
T  4673440 taattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccg 4673511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 8798838 - 8798889
Alignment:
Q  106 gacacatataattacattgaatttaatgattttctcaaattattaacagtgt 157  Q
    |||||||||||||| ||||||||   | ||||||||||||||||||||||||    
T  8798838 gacacatataattatattgaattatgttattttctcaaattattaacagtgt 8798889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 28384995 - 28385070
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||||||||||||||||||||| ||||||    |||||  ||| ||||||||| ||||||| |||||| |||||||    
T  28384995 gacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgtccgt 28385070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 3025617 - 3025559
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    |||||| |||||| ||||| |||||||||| ||||||   |||||||||||||||||||    
T  3025617 tcgtgtccgacactgacacctataattacactgaattatgtgattttctcaaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 20873135 - 20873041
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgt 186  Q
    |||||| |||||||||||| | |||||||| | ||||   ||||||| ||||||||||| |  ||||||| ||||| ||||||| || |||||||    
T  20873135 tcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccgt 20873041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 15816129 - 15816205
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||||||||||| |||||||||| | ||||   ||||||| |||||||||||   |||||||| ||||| |||||||    
T  15816129 cgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 15816205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 20679396 - 20679468
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    ||||||||||| |||||||||| |||| |   |||||||||||||||||||   |||||| ||||||| ||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgtc 20679468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 24362209 - 24362269
Alignment:
Q  106 gacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtc 166  Q
    |||||||||||||||| ||||||   ||||| ||||||||||||| | |||||||| ||||    
T  24362209 gacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtc 24362269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 25172698 - 25172762
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcat 163  Q
    ||||||||||||||||||||||||| || |   | ||||| ||||||||||| ||||||| ||||    
T  25172698 cgacaccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtcagcat 25172762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 39954282 - 39954346
Alignment:
Q  102 caccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtc 166  Q
    ||||| |||||||||||||| | ||||   ||||||||||||||||||| | |||||||| ||||    
T  39954282 caccgtcacatataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 8e-18; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 3966562 - 3966488
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtcc 173  Q
    ||||||||||||||||||||||| ||||||   ||||||||||||||||||| | |||||||||||||| |||||    
T  3966562 cgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtcc 3966488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 171
Target Start/End: Original strand, 28588662 - 28588746
Alignment:
Q  87 atgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgt 171  Q
    |||| |||||| |||||||||||| |||||||||| ||||||   ||||||||||||||||||| | |||||||| |||||||||    
T  28588662 atgtgtcgtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtcaatgt 28588746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 30502375 - 30502439
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    ||||| |||||| ||||||||||||||||||||||| |||||| | |||||||||||||||||||    
T  30502375 catgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattatta 30502439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 30542718 - 30542782
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    ||||| |||||| ||||||||||||||||||||||| |||||| | |||||||||||||||||||    
T  30542718 catgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattatta 30542782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 23012395 - 23012480
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    ||||| |||||| | ||||||||||||||||||||||| ||||  |||||||||||||||||||| || ||||||  ||||||||||    
T  23012395 catgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattattagca-tgtcggtgtgtcaatgtc 23012480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 26716170 - 26716097
Alignment:
Q  132 tgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgtgtccatatctgtgcgtcat 205  Q
    ||||||||||||||||||| |||||||||||||||||||||  | || ||||||||||| |||| |||| ||||    
T  26716170 tgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgtccgtgtccgtatcggtgcttcat 26716097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 26985910 - 26985837
Alignment:
Q  132 tgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgtgtccatatctgtgcgtcat 205  Q
    ||||||||||||||||||| |||||||||||||||||||||  | || ||||||||||| |||| |||| ||||    
T  26985910 tgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgtccgtgtccgtatcggtgcttcat 26985837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 16203795 - 16203871
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    ||||||||||||||||||||||| | ||||    |||||||||||||||||| |||||||||||||| | |||||||    
T  16203795 cgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgt 16203871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 26312835 - 26312727
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtcc-gtgtcc 190  Q
    |||||| ||||||||| ||||||||||||| |||||| | ||||||||||||||||||  | || ||||||| ||| ||||| | || ||||| ||||||    
T  26312835 tcgtgtccgacaccgatacatataattacactgaattaattgattttctcaaattatttgcggtatcggcatatcagtgtccatgtcgtgtccagtgtcc 26312736  T
Q  191 atatctgtg 199  Q
     ||||||||    
T  26312735 gtatctgtg 26312727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 32630735 - 32630807
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgt 171  Q
    |||||| |||||||||||||||||||||||  || ||||||||||||||||| | ||||| || |||||||||    
T  32630735 cgacactgacacatataattacattgaattatataattttctcaaattattatcggtgtcagcgtgtcaatgt 32630807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 21191051 - 21191142
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    |||| |||||||||||| | |||||||| ||||||   ||||||| ||||||||||| | |||||||||||||| ||||||| || ||||||    
T  21191051 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccg 21191142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 34276934 - 34276858
Alignment:
Q  95 tgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    |||||||||| |||| | ||||||||| ||||||| |||||||||| ||||||||||| |||||||  ||||||||||    
T  34276934 tgttcgacac-gacaaacataattacactgaattttatgattttcttaaattattaactgtgtcggtgtgtcaatgtc 34276858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 17925167 - 17925223
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    ||||||||||||||||||||| |||||||||||||   ||||||||| |||||||||    
T  17925167 gtgttcgacaccgacacatattattacattgaattatgtgattttcttaaattatta 17925223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 19429458 - 19429418
Alignment:
Q  132 tgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  19429458 tgattttctcaaattattaacattgtcggcatgtcaatgtc 19429418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 11685998 - 11685925
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    ||||||||||||||||||||||| | ||||    || ||||||||||||||| | |||||||||||||| ||||    
T  11685998 cgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtgtc 11685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 18421828 - 18421900
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtc 158  Q
    ||||| |||||| |||| |||||||||||||||||| || |||   ||||||||||||||||| | |||||||    
T  18421828 catgtgtcgtgtccgacgccgacacatataattacactggattatgtgattttctcaaattatcagcagtgtc 18421900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 30098386 - 30098310
Alignment:
Q  98 tcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccg 174  Q
    |||| |||||||  |||||||||||||||||   ||||||||||||||||||||| || ||| | ||||| ||||||    
T  30098386 tcgataccgacatctataattacattgaattatgtgattttctcaaattattaacggtttcgtcgtgtcagtgtccg 30098310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 39205939 - 39205879
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcg 159  Q
    ||||||| |||||||||||||||   ||||  |||||||||||||||||||| ||||||||    
T  39205939 cgacaccaacacatataattacacctaattatatgattttctcaaattattagcagtgtcg 39205879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 42029824 - 42029744
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtc 166  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||   ||||||||| || || ||||  |||||||| ||||    
T  42029824 catgtgtcgtgtccgacaccgatacatataattacattgaattatgtgattttctaaattttttaattgtgtcggcgtgtc 42029744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 6471889 - 6471940
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    ||||||| ||||||||||||||| ||||||   |||||||||||||||||||    
T  6471889 cgacacccacacatataattacactgaattatgtgattttctcaaattatta 6471940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 15086529 - 15086482
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaatta 147  Q
    ||||||||||||||||||||||||  |||  |||||||||||||||||    
T  15086529 gacaccgacacatataattacattacattatatgattttctcaaatta 15086482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 19820391 - 19820503
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtcc-gtgtccat 192  Q
    |||| |||||||||||| |||||||  | | ||||  |||||||||||||||||||| | |||||||  ||||| ||||||| || ||||| |||||| |    
T  19820391 gtgtccgacaccgacacttataattgtacttaatt--atgattttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgt 19820488  T
Q  193 atctgtgcgtcatag 207  Q
    ||| |||| ||||||    
T  19820489 atccgtgcttcatag 19820503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 22423812 - 22423863
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    ||||||||||| ||||||||| ||||||||   |||||||||||||||||||    
T  22423812 cgacaccgacatatataattatattgaattatgtgattttctcaaattatta 22423863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 41091257 - 41091316
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtc 158  Q
    ||||| ||||||||||||||||| ||||||   |||||||||||||| |||| |||||||    
T  41091257 cgacatcgacacatataattacactgaattatgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 6035541 - 6035469
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    ||||||||||| ||||||||||| ||||||  || | ||||||||||||||| | |||||||| ||||| ||||    
T  6035541 cgacaccgacaaatataattacactgaattatatta-tttctcaaattattagcggtgtcggcgtgtcagtgtc 6035469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 15874197 - 15874226
Alignment:
Q  94 gtgttcgacaccgacacatataattacatt 123  Q
    ||||||||||||||||||||||||||||||    
T  15874197 gtgttcgacaccgacacatataattacatt 15874226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 21814320 - 21814247
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    ||||||||||||||||||||||| || ||||  ||||||||| |||  |||| | |||||||| |||| |||||    
T  21814320 cgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccatgtc 21814247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 31084382 - 31084309
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    ||||| |||||| | |||||||||||||||   ||||||| ||||||||||| | |||||||| ||||| ||||    
T  31084382 cgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 32766951 - 32767004
Alignment:
Q  107 acacatataattacattgaatttaatgattttctcaaattattaacagtgtcgg 160  Q
    ||||||||||||||||||||||    |||||||||||||||||| | |||||||    
T  32766951 acacatataattacattgaattgtgcgattttctcaaattattagcggtgtcgg 32767004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 34879415 - 34879362
Alignment:
Q  93 cgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaatt 146  Q
    ||||| ||||| |||||||||| |||||| ||||||  ||||||||||||||||    
T  34879415 cgtgtccgacatcgacacatattattacactgaattatatgattttctcaaatt 34879362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 38749565 - 38749630
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtc 166  Q
    ||||| ||||||||||||||||||||||   | ||||| ||||||||||| | |||||| ||||||    
T  38749565 acaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgtcgacatgtc 38749630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 6247687 - 6247595
Alignment:
Q  93 cgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    ||||| |||||||||||| | |||||||| ||||||   ||||||| |||||||||||   |||||||| ||||| ||| ||| || ||||||    
T  6247687 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccg 6247595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 18592132 - 18592068
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcat 163  Q
    |||||||| |||||||||||||||||||||   | ||||||| ||| ||||| | ||||||||||    
T  18592132 cgacaccggcacatataattacattgaattatgtaattttcttaaaatattagcggtgtcggcat 18592068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 37411237 - 37411312
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtca 167  Q
    |||||||||||| ||||||||||||| ||| ||||||   ||||||||||||||||||| | ||||||||||||||    
T  37411237 tcgtgttcgacatcgacacatataatcacactgaattatgtgattttctcaaattattagcggtgtcggcatgtca 37411312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 100 - 185
Target Start/End: Complemental strand, 18276579 - 18276494
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    |||||||||||| ||||||||| |||||| | ||||||||||||||||||| | |||||||||| ||| |||| || || ||||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccg 18276494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 207
Target Start/End: Complemental strand, 23718082 - 23717977
Alignment:
Q  102 caccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgtgtccatatctgtgcg 201  Q
    |||||||||||||||||||| ||||||   ||| ||||||||||||||| | |||||||  ||||| ||||||| || ||||||||||  |||| ||||     
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtccgtgtctgtatccgtgct 23717983  T
Q  202 tcatag 207  Q
    ||||||    
T  23717982 tcatag 23717977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 207
Target Start/End: Complemental strand, 24105754 - 24105649
Alignment:
Q  102 caccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgtgtccatatctgtgcg 201  Q
    |||||||||||||||||||| ||||||   ||| ||||||||||||||| | |||||||  ||||| ||||||| || ||||||||||  |||| ||||     
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtccgtgtctgtatccgtgct 24105655  T
Q  202 tcatag 207  Q
    ||||||    
T  24105654 tcatag 24105649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 186
Target Start/End: Original strand, 30404837 - 30404937
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    ||||| |||||| |||| ||||||| | |||||||| ||||||   ||||||| ||||||||||||| |||||||| ||||| ||||||| || ||||||    
T  30404837 catgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccg 30404936  T
Q  186 t 186  Q
    |    
T  30404937 t 30404937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 30527599 - 30527653
Alignment:
Q  103 accgacacatataattacattgaatttaatgattttctcaaattattaacagtgt 157  Q
    ||||||||||||||||||| | ||||  |||||||||||||||||||||||||||    
T  30527599 accgacacatataattacactaaattatatgattttctcaaattattaacagtgt 30527653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 34691799 - 34691856
Alignment:
Q  93 cgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    ||||| ||||||||||||||||||||||| ||||||  |||||||| |||||||||||    
T  34691799 cgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattatta 34691856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 34714211 - 34714268
Alignment:
Q  93 cgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    ||||| ||||||||||||||||||||||| ||||||  |||||||| |||||||||||    
T  34714211 cgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattatta 34714268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 35449565 - 35449504
Alignment:
Q  106 gacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtca 167  Q
    |||||||||||||||| ||||||   |||||||||||||||||||||||||| ||| |||||    
T  35449565 gacacatataattacactgaattctgtgattttctcaaattattaacagtgttggcttgtca 35449504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 210
Target Start/End: Original strand, 20539674 - 20539786
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtcc-gtgtccatatctg 197  Q
    |||||||||||| | |||||||| | ||||  |||||||| ||||||||||| | |||||| | ||||| ||||||| || ||||| |||||| |||| |    
T  20539674 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatccg 20539773  T
Q  198 tgcgtcataggtt 210  Q
    ||| |||||||||    
T  20539774 tgcttcataggtt 20539786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 5367263 - 5367200
Alignment:
Q  87 atgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    |||| |||||| ||||||||||||||||||||||| ||||||   |||||| ||||||||||||    
T  5367263 atgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattatta 5367200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 18571043 - 18570980
Alignment:
Q  87 atgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    |||| ||||||||||||| ||||||||| |||||||||||||   | |||||||||||||||||    
T  18571043 atgtatcgtgttcgacactgacacatatgattacattgaattatgtcattttctcaaattatta 18570980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 18420436 - 18420502
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtca 167  Q
    |||||||||| ||||||| |||||||||   ||||||||||||||||||| |||||| ||| |||||    
T  18420436 acaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtca 18420502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 39279732 - 39279666
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtca 167  Q
    ||||||||||||||||||||| ||||||   ||||||||||| ||||||||| |||| ||| |||||    
T  39279732 acaccgacacatataattacactgaattatttgattttctcatattattaacggtgttggcgtgtca 39279666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 896275 - 896202
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtca 167  Q
    |||| |||| ||||||||||| ||||||||||| |   ||||||||||||| ||||| |||||||||| |||||    
T  896275 gtgtccgacgccgacacatatgattacattgaaatatgtgattttctcaaactattagcagtgtcggcgtgtca 896202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 4332981 - 4332919
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgt 165  Q
    |||||||||||||  |||||||||||||   |||||||| |||||||||| ||||||||||||||    
T  4332981 acaccgacacata--attacattgaattatgtgattttcccaaattattatcagtgtcggcatgt 4332919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 207
Target Start/End: Original strand, 19536391 - 19536507
Alignment:
Q  93 cgtgttcgacaccgacacatataattacattgaatttaatga-ttttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtcc-gtgtcc 190  Q
    ||||| |||||||||||| | |||||||| ||||||   ||| |||| |||||||||||   |||||||| ||||| ||||||| || ||||| ||||||    
T  19536391 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtcc 19536490  T
Q  191 atatctgtgcgtcatag 207  Q
     ||||||||| ||||||    
T  19536491 gtatctgtgcttcatag 19536507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 19614235 - 19614183
Alignment:
Q  106 gacacatataattacattgaatttaatgattttctcaaattattaacagtgtc 158  Q
    |||||||||||||||| ||||||||| ||||||  |||||||||| |||||||    
T  19614235 gacacatataattacactgaatttaaagatttttccaaattattagcagtgtc 19614183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 21616813 - 21616745
Alignment:
Q  107 acacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    ||||||||||||||| ||||||   ||||||||||||||||||| | |||||||| ||||  |||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgt 21616745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 34993975 - 34994011
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatt 128  Q
    ||||||||||||| |||||||||||||||||||||||    
T  34993975 tcgtgttcgacactgacacatataattacattgaatt 34994011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 37559036 - 37558960
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||||||||||| | |||||||||||||||   |||||||  |||||||||| | |||||||| ||||| |||||||    
T  37559036 cgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgt 37558960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 175
Target Start/End: Complemental strand, 15972939 - 15972856
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||||| |||||||||||| | |||||||| ||||||   | ||||| ||||||||||||  |||||||| ||||| |||||||    
T  15972939 tcgtgtccgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgt 15972856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 16069263 - 16069330
Alignment:
Q  108 cacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||| ||||||||| ||||||  |||||||| | ||||||||||| |||||||| ||||| |||||||    
T  16069263 cacaaataattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgt 16069330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 44860379 - 44860328
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    ||||||||||||||||||||||| ||||||    ||||||||||||||||||    
T  44860379 cgacaccgacacatataattacactgaattatgcgattttctcaaattatta 44860328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 1328039 - 1327976
Alignment:
Q  95 tgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcgg 160  Q
    |||| ||||||||||||||  |||| | ||||||| |||||||||||||||||||| | |||||||    
T  1328039 tgtttgacaccgacacata--attatactgaattttatgattttctcaaattattagcggtgtcgg 1327976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 21782832 - 21782886
Alignment:
Q  113 ataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtca 167  Q
    ||||||||| ||||||   ||||||||||||||||||| |||||||||| |||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtca 21782886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 160
Target Start/End: Complemental strand, 27084302 - 27084260
Alignment:
Q  118 tacattgaatttaatgattttctcaaattattaacagtgtcgg 160  Q
    |||||||||||  |||||||||||||||||||| |||||||||    
T  27084302 tacattgaattatatgattttctcaaattattagcagtgtcgg 27084260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 31284115 - 31284045
Alignment:
Q  92 tcgtgttcgacaccgacacata-taattacattgaatttaatgattttctcaaattattaacagtgtcggc 161  Q
    |||||| | ||||||||||||| |||||||| || |||   ||||||||||||||||||| ||||||||||    
T  31284115 tcgtgtccaacaccgacacataataattacaatggattatgtgattttctcaaattattagcagtgtcggc 31284045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 31808149 - 31808075
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcgg 160  Q
    ||||| |||||||| |||| |||||||||||||||| ||||||   ||||||| | ||||||||| | |||||||    
T  31808149 catgtgtcgtgttcaacactgacacatataattacactgaattatgtgattttgttaaattattagcggtgtcgg 31808075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 6045918 - 6045967
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    |||||||||||||||| ||| |||||||  |||||||| |||||||||||    
T  6045918 acaccgacacatataactactttgaattgtatgattttatcaaattatta 6045967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 18422027 - 18421946
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    ||||||||||||||||| | |||||||| ||||||   |||| || | ||||||||||  |||||||| ||||| |||||||    
T  18422027 gtgttcgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgt 18421946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 44605141 - 44605190
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    |||||||||||| |||||||||||||||   | |||||||||||||||||    
T  44605141 acaccgacacatgtaattacattgaattatgttattttctcaaattatta 44605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 207
Target Start/End: Original strand, 14996224 - 14996332
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttct-caaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgtgtccatatctgt 198  Q
    ||||||||||| | |||||||| | ||||  |||||||| | |||||||||| | |||||||| ||||| ||||||| || |||| | |||| |||| ||    
T  14996224 gacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtgtccgtgtcatgtctgcgtccgtatccgt 14996323  T
Q  199 gcgtcatag 207  Q
    || ||||||    
T  14996324 gcttcatag 14996332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 206
Target Start/End: Original strand, 20242722 - 20242834
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgtgtccata 193  Q
    |||| ||||||||||||||||||||||| ||||||   ||||||||| |||  ||||   |||||||| ||||| ||||| | || |||| ||| || ||    
T  20242722 gtgtccgacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtccatgtcgtgtctgtgcccgta 20242821  T
Q  194 tctgtgcgtcata 206  Q
    || |||| |||||    
T  20242822 tccgtgcttcata 20242834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 24975325 - 24975385
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcg 159  Q
    |||||||||| |||||| ||||| ||||||  | |||||||||||||||||| | ||||||    
T  24975325 cgacaccgacgcatatatttacactgaattatacgattttctcaaattattagcggtgtcg 24975385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 35056927 - 35056883
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaa 143  Q
    ||||||||||||||||||||||| ||||||  ||| |||||||||    
T  35056927 cgacaccgacacatataattacactgaattatatggttttctcaa 35056883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 37491856 - 37491900
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaa 144  Q
    ||||||||||||| ||||||||||||||| | | |||||||||||    
T  37491856 gacaccgacacatttaattacattgaattaagttattttctcaaa 37491900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 42205828 - 42205908
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    |||||| || ||||||||||||| ||||  || |||| | | |||||||||||||||||   |||| ||||||||||||||    
T  42205828 tcgtgtccggcaccgacacatatgattattttcaattaagtcattttctcaaattattattggtgttggcatgtcaatgtc 42205908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 3520345 - 3520415
Alignment:
Q  102 caccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||| | ||||| || ||||||||||    
T  3520345 caccgacacatataattacattgaattatatgattttctcaaatgattatcggtgtcagcgtgtcaatgtc 3520415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 7197292 - 7197370
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    |||| |||||||||||| | ||||||||||||||| ||||||||| | ||||||||| | |||||||| ||||||||||    
T  7197292 gtgtccgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgtcaatgtc 7197370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 1433513 - 1433437
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||||||||||||||||||||||   |||    ||||||||||||||||||||| |||||||| |||||||||||||    
T  1433513 cgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgt 1433437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 7438764 - 7438697
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtca 167  Q
    ||||||||||| | |||||||||||||||   ||||||| ||||||||||||| ||||||||||||||    
T  7438764 gacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtca 7438697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 20549855 - 20549789
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcgg 160  Q
    |||| ||||||||||||||||||||||| ||||||   ||||||||||||||||||| | |||||||    
T  20549855 gtgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcgg 20549789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 22602710 - 22602778
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtca 167  Q
    ||||||||||||||||||||||| ||||||   |||||||||||||| ||| || |||||||| |||||    
T  22602710 cgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtca 22602778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 27945100 - 27944989
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtcc-gtgtccatatctg 197  Q
    |||||||||||| | |||||||| ||||||   | |||||||||||||||||   |||||||| ||||| ||||||| || ||||| |||||| |||| |    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccg 27945001  T
Q  198 tgcgtcataggt 209  Q
    ||| ||||||||    
T  27945000 tgcttcataggt 27944989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 21138996 - 21139066
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    ||||||||||||||||||||||| | ||||  |||||||||||||||||||||| |||| | ||||||| ||||    
T  21138996 cgacaccgacacatataattacagt-aatt--atgattttctcaaattattaacggtgttgacatgtcagtgtc 21139066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 24339701 - 24339627
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtcc 173  Q
    |||||||||||| | |||||||| ||||||   ||||||| ||||||||||| | |||||||| |||||||||||    
T  24339701 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtcc 24339627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 32308179 - 32308105
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtcc 173  Q
    |||||| |||||||| ||||||| ||||||   ||||||||||||||||||| | |||||||| ||||| |||||    
T  32308179 cgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtcc 32308105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 6630912 - 6630985
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    ||||| ||||||||||||||||| |||||| | ||| |||||||||||||||   |||||||| ||||| ||||    
T  6630912 cgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 9482993 - 9482944
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattat 148  Q
    ||||||||||||||||||||||| ||||||   |||||||||||||||||    
T  9482993 cgacaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 15902879 - 15902794
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgt 186  Q
    ||||||||||||||||||||| | ||||   ||||||| |||||||||||   |||||||||||||| |||| || || |||||||    
T  15902879 acaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtccgt 15902794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 19206108 - 19206047
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggc 161  Q
    |||||||||||||||||||| | ||||||   ||||||||||||||||||| | ||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggc 19206047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 23948450 - 23948385
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgt 165  Q
    ||||| ||||||||| |||||||| |||| | ||||||| ||||||||||| |||||||| |||||    
T  23948450 gacactgacacatatgattacattcaattaattgattttttcaaattattatcagtgtcgacatgt 23948385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 26329382 - 26329455
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    |||| |||||||||||||||||| ||||||   || ||||||||||||||||||  ||||||| ||||| ||||    
T  26329382 cgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtc 26329455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 5548735 - 5548671
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcat 163  Q
    |||||| |||||||||||||||| ||||||   ||||||||||||||||| | | ||||||||||    
T  5548735 cgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtcggcat 5548671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 24146874 - 24146814
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcgg 160  Q
    |||||||||||||||||||| ||||||||   ||||||||| ||||||||| || ||||||    
T  24146874 gacaccgacacatataattatattgaattatgtgattttctaaaattattagcattgtcgg 24146814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 38134410 - 38134482
Alignment:
Q  103 accgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||||||||||| |||||||||||||   | ||||||||||||||||| | |||||  |||||| ||||||||    
T  38134410 accgacacatatgattacattgaattatgtcattttctcaaattattatcggtgtcaacatgtccatgtccgt 38134482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 43250046 - 43249966
Alignment:
Q  105 cgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    |||||| |||||||||| || |||   | ||||||||||||||||| | |||||||| ||||| ||||||| |||||||||    
T  43250046 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccg 43249966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 3142080 - 3142135
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattattaacagtg 156  Q
    |||||||||||||| |||||||||||||  ||||||| ||||| |||||| |||||    
T  3142080 acaccgacacatatgattacattgaattatatgatttactcaatttattagcagtg 3142135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 10377555 - 10377504
Alignment:
Q  110 catataattacattgaatttaatgattttctcaaattattaacagtgtcggc 161  Q
    |||||||||||| ||||||  |||||||||| | ||||||||||||||||||    
T  10377555 catataattacactgaattatatgattttcttatattattaacagtgtcggc 10377504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 16341555 - 16341496
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtc 158  Q
    |||||||| |||||||||||||| | ||||   ||||||||||||||||||| |||||||    
T  16341555 cgacaccggcacatataattacacttaattatgtgattttctcaaattattatcagtgtc 16341496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 175
Target Start/End: Complemental strand, 26733370 - 26733287
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||||| |||||||||||||| |||||| | ||||||   ||||||| ||||||||||| | |||||| | ||||| |||||||    
T  26733370 tcgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgt 26733287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 3721158 - 3721077
Alignment:
Q  93 cgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    ||||| ||||||||||||||||||||| | | ||||   ||||||||||||||||||| || |||||  |||||| |||||||    
T  3721158 cgtgtccgacaccgacacatataattatactaaattatgtgattttctcaaattattagca-tgtcgaaatgtcagtgtccgt 3721077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 21828407 - 21828481
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||| |||||||| ||||||| || |||   |||||||||||||||| |||| |||||||| ||||| |||||||    
T  21828407 acactgacacatacaattacaatggattatgtgattttctcaaattactaacggtgtcggcgtgtcagtgtccgt 21828481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 26022542 - 26022600
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    |||||||||||||||||||||||| ||||| ||||||  || | || ||||||||||||    
T  26022542 tcgtgttcgacaccgacacatatagttacactgaattagataacttgctcaaattatta 26022600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 29787383 - 29787445
Alignment:
Q  113 ataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    ||||||||| ||||||   ||||||||||||||||||| | |||||||| ||| |||||||||    
T  29787383 ataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgtccgt 29787445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 7328691 - 7328764
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    ||||||||||||||||||||||| | ||||   | ||||||||||||||||| |||| ||| | ||| ||||||    
T  7328691 cgacaccgacacatataattacactaaattatgttattttctcaaattattagcagtatcgacgtgttaatgtc 7328764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 23128663 - 23128712
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    |||||||||||||| |||||| ||||||  ||| ||||||||||||||||    
T  23128663 acaccgacacatatgattacactgaattatatggttttctcaaattatta 23128712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 24105702 - 24105629
Alignment:
Q  134 attttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgtgtccatatctgtgcgtcatag 207  Q
    ||||| ||||||||||| | |||||||| ||||| ||||||| || ||||||| ||| |||| |||| ||||||    
T  24105702 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgtatccgtatccgtgcttcatag 24105629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 25481968 - 25481887
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtcc 173  Q
    |||||| ||||||| |||| | |||||||| ||||||   ||||||| ||||||||||| | |||||||| ||||| |||||    
T  25481968 tcgtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtcc 25481887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 30813836 - 30813759
Alignment:
Q  134 attttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgtgtccatatctgtgcgtcataggttt 211  Q
    ||||||||||||||||| || ||||||  | ||| |||| ||||| |||  |||||| ||||||||| ||||||||||    
T  30813836 attttctcaaattattagcaatgtcggagtatcagtgtctgtctcgtgtatgtgtccgtatctgtgcttcataggttt 30813759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 48246825 - 48246886
Alignment:
Q  111 atataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    ||||||||||||||| ||   |||||||||||||||| ||||||||||| | ||||| ||||    
T  48246825 atataattacattgagttgtgtgattttctcaaattaataacagtgtcgacgtgtcattgtc 48246886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 21880224 - 21880160
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    ||||| |||||| |||||||||||| | |||||||| ||||||   | |||||||||||||||||    
T  21880224 catgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaattatta 21880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 35297672 - 35297724
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaa 151  Q
    ||||||| ||||||||||||| | ||||||   ||||||||||||||||||||    
T  35297672 cgacaccaacacatataattataatgaattatgtgattttctcaaattattaa 35297724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 9709885 - 9709803
Alignment:
Q  93 cgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    ||||| |||||||||||||||||||||||  |||||   ||||||||||||||||||| | |||| ||||||||| |||||||    
T  9709885 cgtgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgt 9709803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 36878533 - 36878447
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    ||||||||||||  ||||||||||| |||||||||| ||||||   ||||||||||||||||||| | |||||||| ||||| ||||    
T  36878533 catgtttcgtgtcagacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 36878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 6427409 - 6427333
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    ||||||| ||||||||||||||||||||||   ||||||||||||||||||| | |||| ||| ||||| |||||||    
T  6427409 cgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgt 6427333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 1864882 - 1864941
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcgg 160  Q
    ||||||||||||||||||||| ||||||   ||||||||||||||||||||| |||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcgg 1864941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 39130762 - 39130876
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtcc-gtgtccat 192  Q
    |||| ||||||||||||||||||||||| | ||||  || ||||||| |||||||||| |||||| || ||||||| ||| | || ||||| |||||| |    
T  39130762 gtgtccgacaccgacacatataattacactaaattatataattttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgt 39130861  T
Q  193 atctgtgcgtcatag 207  Q
    ||| |||| ||||||    
T  39130862 atccgtgcttcatag 39130876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 52903314 - 52903232
Alignment:
Q  93 cgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    ||||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||||| || ||||| ||| | |||||||    
T  52903314 cgtgtccgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgt 52903232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 21530761 - 21530681
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtc 166  Q
    ||||| |||||| |||||||||||| |||||||| |   ||||  |||||||||||||||||||||| |||||||| ||||    
T  21530761 catgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgtc 21530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 38078648 - 38078771
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctc--ttgtc 183  Q
    ||||| |||||| |||||||||||| | |||||||||||||||   ||||||| ||||||||||| | |||||| | ||||| ||| ||| ||   ||||    
T  38078648 catgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccggtgtc 38078747  T
Q  184 cgtgtccatatctgtgcgtcatag 207  Q
    ||||||| |||| |||| ||||||    
T  38078748 cgtgtccgtatccgtgcttcatag 38078771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 38503378 - 38503318
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcgg 160  Q
    |||||||||||||||||||||| |||| |  |||||||||||||||||||| | |||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcgg 38503318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 40181935 - 40181871
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtc 158  Q
    |||| ||||||||| ||||||||||||| ||||||   ||||||||||||||||||| |||||||    
T  40181935 gtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattagcagtgtc 40181871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 46348376 - 46348459
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||||| |||||||||||| | |||||||| | ||||  |||||||| ||||||||||| | |||||||| ||||| |||||||    
T  46348376 tcgtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 46348459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 37598897 - 37598816
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccg 174  Q
    |||||| |||||||||||| |||||||||| |||||||  ||||||| |||||||||||   |||||||| ||||| ||||||    
T  37598897 tcgtgtccgacaccgacacttataattacactgaattt-gtgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 15641063 - 15641116
Alignment:
Q  132 tgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||| || ||||||    
T  15641063 tgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccg 15641116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 27966008 - 27966045
Alignment:
Q  109 acatataattacattgaatttaatgattttctcaaatt 146  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  27966008 acatataattacactgaatttaatgattttctcaaatt 27966045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 44482289 - 44482240
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattat 148  Q
    ||||||||||||||||||||||| ||||||   |||||||||||||||||    
T  44482289 cgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 13436523 - 13436455
Alignment:
Q  93 cgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggc 161  Q
    ||||| ||||||| ||||||||||||||| ||||||   |||||| || ||||||||| ||||||||||    
T  13436523 cgtgtccgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgtcggc 13436455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 30847715 - 30847787
Alignment:
Q  94 gtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtc 166  Q
    |||||| |||| ||||||||| |||||||||||||   | ||||| ||||||||||| ||||||| |||||||    
T  30847715 gtgttcaacactgacacatatgattacattgaattatgtcattttttcaaattattagcagtgtcagcatgtc 30847787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 185
Target Start/End: Original strand, 398772 - 398851
Alignment:
Q  106 gacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    ||||| |||||||||| ||||||   ||||||| ||||||||||| | |||||||| ||||| ||||||| || ||||||    
T  398772 gacacctataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccg 398851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 2896122 - 2896197
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||||||||| |||||  |||| ||||||   ||||||||||||||||||| | |||||||| ||||| |||||||    
T  2896122 gacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 2896197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 7918211 - 7918262
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    |||||| |||||||||||||||| ||||||   |||||||||||||||||||    
T  7918211 cgacactgacacatataattacactgaattatgtgattttctcaaattatta 7918262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 13997940 - 13997869
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    ||||||||||||||||||||| ||||||   ||||||| | |||| |||||| |||||||| ||||| ||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgtc 13997869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 19562622 - 19562689
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtca 167  Q
    |||||| ||||||||||||||| |||| |    |||||||||||||||||| |||||||||| |||||    
T  19562622 gacacctacacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtca 19562689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 5927340 - 5927426
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    |||||| ||||| | |||||||||| ||||  |||||||| ||||||||||| ||||||  || ||||| ||||||| || ||||||    
T  5927340 cgacactgacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccg 5927426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 6612171 - 6612257
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    |||||||||||| | |||||||| ||||||   | ||||| ||||||||||||| || ||||| ||||| ||||||| || ||||||    
T  6612171 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccg 6612257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 14332635 - 14332693
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    |||||| ||||||||| ||||||||||||| | ||||   |||||||||||||||||||    
T  14332635 tcgtgtccgacaccgagacatataattacactaaattatgtgattttctcaaattatta 14332693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 29163374 - 29163448
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtc 166  Q
    |||||| ||||||||||||||||||||| ||||||||   ||||||||  ||||| ||| | |||||||| ||||    
T  29163374 tcgtgtccgacaccgacacatataattaaattgaattatgtgattttcctaaatttttagcggtgtcggcgtgtc 29163448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 25361945 - 25361896
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattat 148  Q
    |||||| |||||||||||||||| ||||||   |||||||||||||||||    
T  25361945 cgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 34712383 - 34712464
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctctt 180  Q
    |||||| |||||||||||||||| | ||||   | ||||||||||||||||| ||||| |||  ||| ||||||||| ||||    
T  34712383 cgacactgacacatataattacactaaattatgttattttctcaaattattagcagtgacggtgtgttaatgtccgtgtctt 34712464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 1486709 - 1486777
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtca 167  Q
    |||||||||||| |||||||||| ||||||   ||||||| ||||||||||| | ||||| || |||||    
T  1486709 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtca 1486777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 9629900 - 9629960
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcg 159  Q
    |||||||||||| |||||| ||| ||||||  |||||||| ||||||||||| | ||||||    
T  9629900 cgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcg 9629960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 19637839 - 19637799
Alignment:
Q  87 atgtttcgtgttcgacaccgacacatataattacattgaat 127  Q
    |||| |||||| |||||||||||||||| ||||||||||||    
T  19637839 atgtatcgtgtccgacaccgacacatatgattacattgaat 19637799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 20157350 - 20157410
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcg 159  Q
    |||||||||||||||| |||||| ||||||   ||||||||||| ||||||| | ||||||    
T  20157350 cgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcg 20157410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 190
Target Start/End: Original strand, 25098563 - 25098647
Alignment:
Q  107 acacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc-cgtctcttgtccgtgtcc 190  Q
    ||||||||||||||| ||||||   ||||||||||||||||| | | |||||||| ||||  ||||  |||| ||||||||||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattatcagcggtgtcggcttgtccttgtcgtgtctgttgtccgtgtcc 25098647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 31672889 - 31672969
Alignment:
Q  93 cgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtcc 173  Q
    ||||| ||||||||| || | |||||||| |||||| | ||||||| ||||||||||| | |||||||  ||||| |||||    
T  31672889 cgtgtccgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtcc 31672969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 34371772 - 34371728
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaa 143  Q
    ||||||||||||||||||||||| ||||||   ||||||||||||    
T  34371772 cgacaccgacacatataattacactgaattatgtgattttctcaa 34371728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 38075970 - 38076030
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcg 159  Q
    |||||||||||||||| |||||| ||| ||   |||||| |||||||||||| ||||||||    
T  38075970 cgacaccgacacatatgattacactgacttatgtgatttactcaaattattagcagtgtcg 38076030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 42359449 - 42359525
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||||||||||| | |||||||| |||||||  ||||||| |||||||||||   ||||| || ||||| |||||||    
T  42359449 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgt 42359525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 455 - 538
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||||| |||||||||||| | |||||||| |||||||  ||||||| ||||||||||| |||||||||| | ||| |||||||    
T  455 tcgtgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgt 538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 20231 - 20120
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtcc-gtgtccatatctg 197  Q
    |||||| ||||| | |||||||| ||||||   ||||||| ||||||||||| | |||||||| ||||| ||||||| || ||||| |||||| ||||||    
T  20231 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctg 20132  T
Q  198 tgcgtcataggt 209  Q
    ||| ||||||||    
T  20131 tgcttcataggt 20120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 9747 - 9814
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtc 166  Q
    ||||||||||||||||||||||| |||||| | |||||||||||||||||||   | |||||||||||    
T  9747 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagtggcgtcggcatgtc 9814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 135312 - 135373
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcgg 160  Q
    |||||||||||||||||||||||  |||||   ||||||||||||||||||| |||||||||    
T  135312 cgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcgg 135373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 1716 - 1636
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtc 166  Q
    ||||| |||||| |||||||||||| |||||||| |   ||||  |||||||||||||||||||||| |||||||| ||||    
T  1716 catgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgtc 1636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 28907 - 28847
Alignment:
Q  101 acaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggc 161  Q
    ||||||||||||||||||||||||||||    |||||||| ||||||||||| ||||||||    
T  28907 acaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtcggc 28847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000007; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 3712516 - 3712560
Alignment:
Q  106 gacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  3712516 gacacatataattacattgaattacatgattttctcaaattatta 3712560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 40742650 - 40742574
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    ||||| ||||||||||||||||| |  |||  |||||||||||||||||||||  |||||||| | |||||||||||    
T  40742650 cgacatcgacacatataattacactagattatatgattttctcaaattattaatggtgtcggcgtttcaatgtccgt 40742574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 12628618 - 12628693
Alignment:
Q  132 tgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgtgtccatatctgtgcgtcatag 207  Q
    ||||||| ||||||||||||| |||||||||||||| |||| || || ||||||| ||| |||| |||| ||||||    
T  12628618 tgattttttcaaattattaactgtgtcggcatgtcagtgtcagtgtcatgtccgtatccgtatccgtgcttcatag 12628693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 35952617 - 35952684
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtc 166  Q
    |||||| || ||||||||||||||||||||  |||||||| ||||||||||| ||||| |||| ||||    
T  35952617 cgacactgatacatataattacattgaattatatgattttatcaaattattagcagtggcggcgtgtc 35952684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 18743906 - 18743860
Alignment:
Q  132 tgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctc 178  Q
    ||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  18743906 tgattttatcaaattattaacaatgtcggcatgtcagtgtccgtctc 18743860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 35723384 - 35723458
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatg-attttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    |||||| |||||||||||||||||||||||   || ||||||||||||||||| | |||||||| ||||| ||||    
T  35723384 cgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgtc 35723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 185
Target Start/End: Original strand, 23292979 - 23293072
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    |||||| |||||||||||| | |||||| | ||||||   ||||||| ||||||||||| | |||||||| ||||| ||||||| || ||||||    
T  23292979 tcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccg 23293072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 8423711 - 8423779
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcgg 160  Q
    |||||| |||||||||||  |||||||||| ||||||   ||||||||||||||||||| | |||||||    
T  8423711 tcgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtcgg 8423779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 13783340 - 13783264
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||||||| |||||||||||||| |||||||  |||| ||||||||| |||| | |||||||  ||||| |||||||    
T  13783340 cgacaccggcacatataattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgtccgt 13783264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 5775359 - 5775410
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaa 151  Q
    |||||||||||||||||||||| | ||||   ||||||||||||||||||||    
T  5775359 gacaccgacacatataattacacttaattatgtgattttctcaaattattaa 5775410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 185
Target Start/End: Complemental strand, 21945575 - 21945476
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    ||||| || ||| |||||||||||| | |||||||| ||||||   | ||||| ||||||||||| | |||||||||||||| |||| || || ||||||    
T  21945575 catgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccg 21945476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 159
Target Start/End: Original strand, 22440609 - 22440660
Alignment:
Q  108 cacatataattacattgaatttaatgattttctcaaattattaacagtgtcg 159  Q
    |||||||||||||| ||||||   ||||||||||||||||||||| ||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgtcg 22440660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 40613504 - 40613441
Alignment:
Q  104 ccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtca 167  Q
    |||||||||||||||||| ||||||   ||||||||||||| ||||| | |||||||| |||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 48139336 - 48139253
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaat 169  Q
    ||||| ||||||  |||| | ||||||||||||||||| ||||    |||| |||||||||||||||||||||| | |||||||    
T  48139336 catgtgtcgtgtctgacatcaacacatataattacattaaattatgagattatctcaaattattaacagtgtcgacgtgtcaat 48139253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 190
Target Start/End: Complemental strand, 49431092 - 49430993
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttct-caaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgtgtcc 190  Q
    |||||| |||||||||||| | |||||||| ||||||   ||||||| | |||||||||| | |||||||| ||||| ||||||  || |||||||||||    
T  49431092 tcgtgtccgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccgagtcgtgtccgtgtcc 49430993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 903971 - 903905
Alignment:
Q  109 acatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    ||||||||||||| ||||||   ||||||||||||||||||||| ||| |||  ||||| |||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaacggtgccggtgtgtcagtgtccgt 903905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 7214523 - 7214573
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    ||||||||| |||||||||||||| ||||   |||||||||||||||||||    
T  7214523 gacaccgacgcatataattacattaaattatgtgattttctcaaattatta 7214573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 33950194 - 33950144
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    ||||||||||||||| |||||||| ||||   |||||||||||||||||||    
T  33950194 gacaccgacacatatgattacattaaattatgtgattttctcaaattatta 33950144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 44081584 - 44081630
Alignment:
Q  106 gacacatataattacattgaatttaatgattttctcaaattattaac 152  Q
    |||||||||||||||||| ||||  |||||||| |||||||||||||    
T  44081584 gacacatataattacattaaattatatgattttttcaaattattaac 44081630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 54580016 - 54580074
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    |||||| |||||||||||| |||||||||| ||||||   ||||||| |||||||||||    
T  54580016 tcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattatta 54580074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 15029824 - 15029751
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    ||||||| ||||||||||||||| ||||||   |||| || ||||||||||| ||||||| || ||||| ||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtc 15029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 21539879 - 21539940
Alignment:
Q  111 atataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtc 172  Q
    ||||||||||| | ||||  |||||||||| ||||||||||  |||||||||||||| ||||    
T  21539879 atataattacactaaattatatgattttcttaaattattaatggtgtcggcatgtcagtgtc 21539940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 40179623 - 40179688
Alignment:
Q  86 catgtttcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaa 151  Q
    ||||| |||||| |||||||||| |||||||||||| ||||||   ||||||| ||||| ||||||    
T  40179623 catgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactattaa 40179688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 56257978 - 56257933
Alignment:
Q  113 ataattacattgaatttaatgattttctcaaattattaacagtgtc 158  Q
    ||||||||| ||||||  |||||||||||||||||||| |||||||    
T  56257978 ataattacactgaattatatgattttctcaaattattagcagtgtc 56257933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 207
Target Start/End: Original strand, 3947766 - 3947874
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgtgtccatatctgt 198  Q
    |||||| ||||| | |||||||| ||||||    |||||| ||||||||||| | |||||||||||||  |||| || |  ||||||||||| ||||||     
T  3947766 cgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcggcatgtccgtgtctgtgtggtgtccgtgtccgtatctga 3947865  T
Q  199 gcgtcatag 207  Q
    || ||||||    
T  3947866 gcttcatag 3947874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 9996898 - 9996838
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcgg 160  Q
    |||||||| ||||||||||| | ||||||   ||||||||||||||||||  |||||||||    
T  9996898 gacaccgagacatataattatactgaattatgtgattttctcaaattattgtcagtgtcgg 9996838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 26504303 - 26504359
Alignment:
Q  103 accgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcg 159  Q
    ||||||||||||||||||| |||| |   ||||||||| ||||||||| ||||||||    
T  26504303 accgacacatataattacactgaactatttgattttcttaaattattagcagtgtcg 26504359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 185
Target Start/End: Complemental strand, 46742 - 46655
Alignment:
Q  98 tcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    ||||||||||||  | |||||||| ||||||   ||||||| ||||||||||||| |||||||| ||||| ||||||| || ||||||    
T  46742 tcgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccg 46655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 166
Target Start/End: Complemental strand, 70344 - 70270
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtc 166  Q
    |||||| |||||||||||| |||||||||| ||||||   | ||||| ||||||||||||| |||||| ||||||    
T  70344 tcgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtcgacatgtc 70270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 240022 - 240072
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattatta 150  Q
    ||||||||||||||| |||||||||||||  || |||||||||||||||||    
T  240022 gacaccgacacatatgattacattgaattatattattttctcaaattatta 240072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 8864 - 8771
Alignment:
Q  92 tcgtgttcgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    |||||| |||||||||||| | |||||||| | |||   |||||||| ||||||||||| | |||||||| ||||| ||||||| || ||||||    
T  8864 tcgtgtccgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 192284 - 192345
Alignment:
Q  134 attttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgtgtccatatc 195  Q
    ||||||||||||||||||| |||||||| ||||| ||||||| || |||| |||||| ||||    
T  192284 attttctcaaattattaacggtgtcggcgtgtcagtgtccgtatcgtgtctgtgtccgtatc 192345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 23479 - 23371
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccgtgtccatatctgt 198  Q
    |||||||||||| |||||||||| ||||||   ||||||| |  | |||||| | |||||||| ||||| |||| || || ||||||||||| |||| ||    
T  23479 cgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgtgtccgtatccgt 23380  T
Q  199 gcgtcatag 207  Q
    || ||||||    
T  23379 gcttcatag 23371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 21098 - 21026
Alignment:
Q  103 accgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    ||||||||||||||||| |  || ||   ||||||||||||||||||||| ||||| |||||||| |||||||    
T  21098 accgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgt 21026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 263372 - 263448
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgt 175  Q
    |||||| ||||| |||||||||| ||||||   || |||||||||||||||| |||||| | ||||||| |||||||    
T  263372 cgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgt 263448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 225274 - 225354
Alignment:
Q  105 cgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtcaatgtccgtctcttgtccg 185  Q
    |||||| ||||||||||||| |||   | ||||||||||||||||| | |||||||| ||||| ||||||| || ||||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 225354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 6371 - 6312
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtc 158  Q
    ||||||||||||||||||||||||||||||     ||||| ||||||||||| |||||||    
T  6371 cgacaccgacacatataattacattgaattatgcaattttgtcaaattattagcagtgtc 6312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 9957 - 9890
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtc 166  Q
    ||||||||||||||||||||||| || |||| |||||||||| |||  |||| | |||||||| ||||    
T  9957 cgacaccgacacatataattacactgcattttatgattttctaaaaaaattagctgtgtcggcgtgtc 9890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 90901 - 90850
Alignment:
Q  100 gacaccgacacatataattacattgaatttaatgattttctcaaattattaa 151  Q
    |||| ||||| ||||||||||| ||||||  |||||||||||||||||||||    
T  90901 gacatcgacatatataattacactgaattatatgattttctcaaattattaa 90850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 99952 - 99885
Alignment:
Q  99 cgacaccgacacatataattacattgaatttaatgattttctcaaattattaacagtgtcggcatgtc 166  Q
    ||||||| ||||||||||||||||||||||   | ||||||| ||||||||| | |||||| ||||||    
T  99952 cgacaccaacacatataattacattgaattatgttattttctaaaattattatcggtgtcgacatgtc 99885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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