View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13045_high_5 (Length: 261)

Name: NF13045_high_5
Description: NF13045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13045_high_5
NF13045_high_5
[»] scaffold0041 (2 HSPs)
scaffold0041 (30-240)||(27221-27431)
scaffold0041 (28-107)||(27546-27625)
[»] chr8 (48 HSPs)
chr8 (30-240)||(5035114-5035324)
chr8 (30-177)||(34992163-34992312)
chr8 (30-175)||(41859310-41859457)
chr8 (30-177)||(32536708-32536857)
chr8 (30-147)||(5034898-5035016)
chr8 (37-177)||(37639718-37639860)
chr8 (29-147)||(34992014-34992133)
chr8 (30-177)||(38023624-38023773)
chr8 (30-177)||(41859995-41860144)
chr8 (34-177)||(32537387-32537529)
chr8 (28-78)||(1365827-1365877)
chr8 (30-78)||(61454-61502)
chr8 (116-177)||(38024430-38024492)
chr8 (30-67)||(44098432-44098469)
chr8 (88-158)||(788084-788151)
chr8 (113-169)||(10501822-10501877)
chr8 (30-78)||(25876521-25876569)
chr8 (30-78)||(39254787-39254835)
chr8 (90-160)||(7818534-7818604)
chr8 (90-160)||(10806008-10806078)
chr8 (29-79)||(27918046-27918096)
chr8 (90-160)||(39852759-39852829)
chr8 (90-159)||(38778752-38778821)
chr8 (29-78)||(42345165-42345214)
chr8 (30-147)||(43924490-43924607)
chr8 (30-78)||(62240-62288)
chr8 (38-102)||(37640538-37640601)
chr8 (30-78)||(39255752-39255800)
chr8 (30-78)||(44751608-44751656)
chr8 (31-78)||(28090658-28090705)
chr8 (29-64)||(32536946-32536981)
chr8 (44-147)||(35943770-35943873)
chr8 (29-136)||(36936639-36936746)
chr8 (59-160)||(43591036-43591137)
chr8 (90-160)||(16889255-16889325)
chr8 (90-160)||(16889784-16889854)
chr8 (90-160)||(33114144-33114214)
chr8 (29-63)||(38023857-38023891)
chr8 (90-160)||(39852214-39852284)
chr8 (90-160)||(40309456-40309526)
chr8 (44-158)||(40449485-40449599)
chr8 (29-79)||(41092171-41092221)
chr8 (90-160)||(44062045-44062115)
chr8 (30-76)||(44752572-44752618)
chr8 (28-78)||(44835429-44835479)
chr8 (29-125)||(36936371-36936467)
chr8 (30-78)||(42346560-42346608)
chr8 (37-101)||(43924995-43925059)
[»] chr7 (48 HSPs)
chr7 (32-240)||(7677647-7677855)
chr7 (29-240)||(38072128-38072340)
chr7 (34-240)||(4261209-4261416)
chr7 (30-177)||(17145622-17145772)
chr7 (30-143)||(38779498-38779611)
chr7 (30-177)||(668179-668328)
chr7 (30-177)||(38071898-38072047)
chr7 (30-177)||(41194513-41194659)
chr7 (30-177)||(37864206-37864355)
chr7 (30-177)||(4261495-4261644)
chr7 (30-177)||(669002-669151)
chr7 (34-177)||(7677421-7677566)
chr7 (30-146)||(38778854-38778971)
chr7 (30-111)||(37468972-37469053)
chr7 (30-147)||(17145802-17145920)
chr7 (71-177)||(32859274-32859380)
chr7 (30-87)||(37468910-37468967)
chr7 (29-141)||(24322288-24322400)
chr7 (44-147)||(42607095-42607198)
chr7 (30-169)||(41195275-41195414)
chr7 (30-128)||(44909309-44909407)
chr7 (44-121)||(40257759-40257836)
chr7 (30-122)||(27599211-27599303)
chr7 (30-134)||(27600039-27600143)
chr7 (44-147)||(40257594-40257697)
chr7 (90-160)||(27855625-27855695)
chr7 (30-140)||(29315249-29315359)
chr7 (31-64)||(668420-668453)
chr7 (37-78)||(20890206-20890247)
chr7 (30-79)||(29006347-29006396)
chr7 (69-175)||(33323807-33323915)
chr7 (44-147)||(6729412-6729515)
chr7 (35-78)||(42455040-42455083)
chr7 (30-77)||(45887981-45888028)
chr7 (30-77)||(47331954-47332001)
chr7 (90-160)||(4895038-4895108)
chr7 (59-145)||(20900464-20900550)
chr7 (90-160)||(24043999-24044069)
chr7 (90-160)||(32499829-32499898)
chr7 (90-160)||(36682895-36682965)
chr7 (90-160)||(46815018-46815088)
chr7 (90-160)||(47814031-47814101)
chr7 (30-79)||(29007198-29007247)
chr7 (30-63)||(37864092-37864125)
chr7 (30-79)||(41224842-41224891)
chr7 (44-161)||(44541002-44541119)
chr7 (88-144)||(8464445-8464501)
chr7 (37-77)||(45887286-45887326)
[»] chr3 (64 HSPs)
chr3 (35-240)||(36750050-36750256)
chr3 (30-240)||(52492116-52492327)
chr3 (30-177)||(36750337-36750485)
chr3 (30-177)||(19132711-19132860)
chr3 (34-177)||(32490094-32490239)
chr3 (31-185)||(38922744-38922900)
chr3 (31-177)||(45242067-45242215)
chr3 (28-177)||(38923564-38923715)
chr3 (30-147)||(19132563-19132681)
chr3 (29-177)||(45242886-45243036)
chr3 (30-177)||(41755499-41755648)
chr3 (30-177)||(41756331-41756480)
chr3 (30-177)||(44687062-44687211)
chr3 (32-177)||(3970994-3971141)
chr3 (30-147)||(32489946-32490064)
chr3 (30-177)||(3971801-3971950)
chr3 (30-177)||(3997928-3998077)
chr3 (30-177)||(44686255-44686403)
chr3 (32-177)||(3998740-3998887)
chr3 (64-177)||(45500507-45500620)
chr3 (30-177)||(52491891-52492035)
chr3 (64-168)||(8436574-8436678)
chr3 (65-168)||(8440119-8440222)
chr3 (29-77)||(31556217-31556265)
chr3 (88-177)||(8653622-8653710)
chr3 (90-160)||(8427276-8427346)
chr3 (30-76)||(17226968-17227014)
chr3 (88-177)||(11267588-11267676)
chr3 (28-77)||(31556186-31556235)
chr3 (29-64)||(38923437-38923472)
chr3 (29-64)||(45242307-45242342)
chr3 (29-71)||(17227955-17227997)
chr3 (90-160)||(25025234-25025304)
chr3 (90-160)||(31014880-31014950)
chr3 (90-160)||(47737629-47737699)
chr3 (30-79)||(14667297-14667345)
chr3 (30-79)||(37105076-37105125)
chr3 (30-79)||(49756275-49756324)
chr3 (30-79)||(49757181-49757230)
chr3 (30-78)||(39901846-39901894)
chr3 (31-79)||(42145277-42145325)
chr3 (30-78)||(43638078-43638126)
chr3 (29-64)||(3971233-3971268)
chr3 (29-64)||(3998613-3998648)
chr3 (61-136)||(8652841-8652916)
chr3 (29-64)||(41755729-41755764)
chr3 (130-177)||(50305167-50305214)
chr3 (90-160)||(3944955-3945025)
chr3 (90-160)||(8427699-8427769)
chr3 (90-160)||(19555879-19555949)
chr3 (90-160)||(31014397-31014467)
chr3 (90-160)||(37374875-37374945)
chr3 (90-160)||(41875572-41875642)
chr3 (90-160)||(42356765-42356835)
chr3 (90-160)||(44868574-44868644)
chr3 (90-160)||(48219191-48219261)
chr3 (90-160)||(49752333-49752403)
chr3 (90-160)||(49752866-49752936)
chr3 (90-160)||(50687664-50687734)
chr3 (90-160)||(55281895-55281965)
chr3 (30-78)||(30847853-30847901)
chr3 (29-101)||(38336943-38337015)
chr3 (37-101)||(38337454-38337518)
chr3 (90-158)||(42356296-42356364)
[»] chr5 (37 HSPs)
chr5 (34-185)||(33001936-33002087)
chr5 (30-177)||(8040195-8040344)
chr5 (30-177)||(15183916-15184065)
chr5 (30-177)||(33002715-33002864)
chr5 (30-175)||(8204120-8204267)
chr5 (29-177)||(686416-686565)
chr5 (31-177)||(687247-687395)
chr5 (30-132)||(36626576-36626678)
chr5 (30-157)||(12190078-12190206)
chr5 (30-177)||(15183088-15183238)
chr5 (30-147)||(8040374-8040492)
chr5 (30-141)||(33283960-33284071)
chr5 (29-77)||(39950403-39950451)
chr5 (190-240)||(33002584-33002634)
chr5 (34-141)||(33283169-33283276)
chr5 (87-168)||(42518809-42518891)
chr5 (29-140)||(16970971-16971082)
chr5 (29-66)||(39950444-39950481)
chr5 (30-78)||(13654933-13654981)
chr5 (29-64)||(686667-686702)
chr5 (90-160)||(3958090-3958160)
chr5 (29-79)||(4608589-4608639)
chr5 (60-109)||(33685775-33685824)
chr5 (35-76)||(39167442-39167483)
chr5 (30-78)||(26688166-26688214)
chr5 (30-78)||(26957897-26957945)
chr5 (30-77)||(2319266-2319313)
chr5 (36-79)||(4607470-4607513)
chr5 (29-64)||(15183779-15183814)
chr5 (90-160)||(3739060-3739130)
chr5 (44-102)||(4789534-4789592)
chr5 (90-160)||(28075925-28075995)
chr5 (90-160)||(42408521-42408591)
chr5 (29-78)||(7625472-7625521)
chr5 (29-78)||(13655660-13655709)
chr5 (29-78)||(14553666-14553715)
chr5 (88-144)||(38064835-38064891)
[»] chr4 (76 HSPs)
chr4 (30-185)||(39523164-39523319)
chr4 (30-177)||(11417687-11417836)
chr4 (28-185)||(38143628-38143787)
chr4 (29-177)||(10424122-10424272)
chr4 (30-177)||(10424958-10425107)
chr4 (30-177)||(21166274-21166423)
chr4 (30-177)||(29651231-29651380)
chr4 (29-177)||(36865616-36865766)
chr4 (30-177)||(26611182-26611331)
chr4 (28-177)||(38694850-38695004)
chr4 (30-147)||(11417867-11417985)
chr4 (35-177)||(26610350-26610495)
chr4 (30-177)||(45230365-45230514)
chr4 (30-177)||(45235859-45236008)
chr4 (30-147)||(31836390-31836508)
chr4 (27-177)||(21165444-21165596)
chr4 (31-177)||(29650416-29650564)
chr4 (30-147)||(9939301-9939419)
chr4 (29-177)||(31835147-31835297)
chr4 (31-147)||(36864818-36864935)
chr4 (30-177)||(39522375-39522524)
chr4 (29-147)||(38694701-38694820)
chr4 (44-177)||(36451327-36451461)
chr4 (30-175)||(9939125-9939269)
chr4 (44-177)||(25970120-25970250)
chr4 (48-147)||(38143506-38143606)
chr4 (68-185)||(11806129-11806244)
chr4 (64-177)||(17648044-17648158)
chr4 (47-177)||(23383327-23383457)
chr4 (44-171)||(36450742-36450871)
chr4 (30-178)||(25970701-25970851)
chr4 (29-122)||(30808620-30808713)
chr4 (190-240)||(39522605-39522655)
chr4 (30-79)||(47377597-47377646)
chr4 (30-78)||(47198605-47198653)
chr4 (35-78)||(3848578-3848621)
chr4 (60-146)||(35428091-35428177)
chr4 (29-78)||(25371545-25371594)
chr4 (30-79)||(37275088-37275137)
chr4 (30-83)||(47376852-47376905)
chr4 (88-158)||(5825392-5825459)
chr4 (30-130)||(38014870-38014970)
chr4 (35-78)||(3847891-3847934)
chr4 (29-64)||(10424385-10424420)
chr4 (29-64)||(21166136-21166171)
chr4 (29-64)||(29650655-29650690)
chr4 (29-64)||(31836220-31836255)
chr4 (29-64)||(45235732-45235767)
chr4 (44-134)||(45330579-45330669)
chr4 (36-78)||(55159186-55159228)
chr4 (88-136)||(12589345-12589393)
chr4 (30-78)||(30478309-30478357)
chr4 (30-78)||(42544488-42544536)
chr4 (30-78)||(47199395-47199443)
chr4 (30-78)||(48013317-48013365)
chr4 (29-64)||(26611055-26611090)
chr4 (90-160)||(199059-199129)
chr4 (37-79)||(11680283-11680325)
chr4 (37-79)||(11688562-11688604)
chr4 (90-160)||(20075585-20075655)
chr4 (35-77)||(25370511-25370553)
chr4 (90-160)||(31876848-31876918)
chr4 (30-136)||(46765110-46765216)
chr4 (90-160)||(48781542-48781612)
chr4 (90-160)||(52597667-52597737)
chr4 (90-160)||(55815885-55815955)
chr4 (30-79)||(23425206-23425255)
chr4 (30-79)||(28684231-28684280)
chr4 (31-139)||(52758648-52758757)
chr4 (113-160)||(20822706-20822754)
chr4 (30-74)||(23865321-23865365)
chr4 (30-122)||(45331409-45331501)
chr4 (71-159)||(51412637-51412724)
chr4 (30-78)||(52757813-52757861)
chr4 (74-142)||(53535835-53535903)
chr4 (30-78)||(55160067-55160114)
[»] chr6 (33 HSPs)
chr6 (29-185)||(33480519-33480677)
chr6 (28-177)||(22579933-22580084)
chr6 (32-177)||(3542816-3542963)
chr6 (28-177)||(15083217-15083368)
chr6 (30-177)||(33018167-33018316)
chr6 (30-147)||(3542993-3543111)
chr6 (30-132)||(7193338-7193440)
chr6 (27-177)||(33479693-33479846)
chr6 (35-177)||(15082402-15082546)
chr6 (34-173)||(22587213-22587354)
chr6 (37-147)||(33018346-33018457)
chr6 (30-147)||(7193508-7193626)
chr6 (34-107)||(22582450-22582523)
chr6 (28-78)||(7531827-7531877)
chr6 (29-83)||(24126713-24126767)
chr6 (30-79)||(24125972-24126021)
chr6 (29-64)||(15082638-15082673)
chr6 (29-64)||(22580596-22580631)
chr6 (29-64)||(22587082-22587117)
chr6 (29-64)||(33479938-33479973)
chr6 (44-134)||(25067794-25067884)
chr6 (51-141)||(29290144-29290234)
chr6 (30-78)||(7532440-7532488)
chr6 (30-78)||(9574571-9574619)
chr6 (30-78)||(14337557-14337605)
chr6 (30-140)||(1035341-1035451)
chr6 (90-160)||(6032709-6032779)
chr6 (90-160)||(13944350-13944420)
chr6 (36-78)||(26227408-26227450)
chr6 (90-160)||(30610771-30610841)
chr6 (90-160)||(30611301-30611371)
chr6 (30-78)||(7158435-7158483)
chr6 (30-78)||(7159341-7159389)
[»] chr1 (62 HSPs)
chr1 (44-185)||(6075988-6076127)
chr1 (30-177)||(193850-193997)
chr1 (30-177)||(16270207-16270357)
chr1 (30-147)||(23440795-23440913)
chr1 (29-177)||(43737728-43737878)
chr1 (30-175)||(48972346-48972493)
chr1 (30-177)||(51974437-51974586)
chr1 (30-157)||(9948807-9948935)
chr1 (30-177)||(23440617-23440765)
chr1 (29-177)||(16271047-16271197)
chr1 (30-175)||(50826992-50827138)
chr1 (30-147)||(43737908-43738026)
chr1 (29-177)||(51975126-51975276)
chr1 (30-177)||(9947995-9948144)
chr1 (30-185)||(48971705-48971862)
chr1 (54-177)||(12925897-12926020)
chr1 (28-185)||(38930310-38930469)
chr1 (48-177)||(47334217-47334347)
chr1 (54-177)||(31390726-31390847)
chr1 (44-177)||(6076767-6076901)
chr1 (54-177)||(20794313-20794436)
chr1 (65-177)||(17050488-17050600)
chr1 (32-177)||(38931145-38931293)
chr1 (30-178)||(47334798-47334948)
chr1 (59-124)||(27888700-27888765)
chr1 (190-240)||(6076636-6076686)
chr1 (65-129)||(40649516-40649580)
chr1 (63-144)||(46133726-46133807)
chr1 (30-78)||(51987827-51987875)
chr1 (30-169)||(194610-194749)
chr1 (30-79)||(1012547-1012596)
chr1 (29-78)||(8560838-8560887)
chr1 (30-78)||(35616775-35616823)
chr1 (30-78)||(51988464-51988512)
chr1 (29-64)||(16270900-16270935)
chr1 (29-64)||(38930574-38930609)
chr1 (90-160)||(7219068-7219138)
chr1 (88-177)||(27418221-27418311)
chr1 (61-151)||(41465267-41465357)
chr1 (90-160)||(51247888-51247958)
chr1 (90-160)||(51248439-51248509)
chr1 (111-168)||(13536362-13536418)
chr1 (29-78)||(37874063-37874112)
chr1 (31-139)||(49611498-49611607)
chr1 (30-134)||(11032163-11032267)
chr1 (88-158)||(27420214-27420282)
chr1 (89-160)||(37725438-37725509)
chr1 (57-136)||(38618257-38618336)
chr1 (29-64)||(51974978-51975013)
chr1 (29-75)||(35615766-35615812)
chr1 (90-160)||(41563748-41563818)
chr1 (30-140)||(45064686-45064796)
chr1 (30-76)||(48869769-48869815)
chr1 (90-160)||(49533803-49533873)
chr1 (88-146)||(50267620-50267678)
chr1 (64-146)||(51977130-51977212)
chr1 (30-79)||(1013471-1013520)
chr1 (29-78)||(49610705-49610754)
chr1 (37-77)||(14924681-14924721)
chr1 (37-77)||(14925343-14925383)
chr1 (30-78)||(37822472-37822520)
chr1 (69-159)||(42645960-42646047)
[»] chr2 (37 HSPs)
chr2 (30-177)||(4479603-4479750)
chr2 (30-177)||(21471853-21472002)
chr2 (30-143)||(14573261-14573374)
chr2 (30-177)||(21471017-21471166)
chr2 (30-177)||(38834387-38834536)
chr2 (30-147)||(37547998-37548116)
chr2 (29-147)||(13134317-13134436)
chr2 (30-132)||(14573945-14574047)
chr2 (30-147)||(38834566-38834684)
chr2 (30-78)||(33433160-33433208)
chr2 (25-169)||(4478846-4478990)
chr2 (30-66)||(1164788-1164824)
chr2 (30-78)||(5276465-5276513)
chr2 (29-145)||(30544726-30544842)
chr2 (90-160)||(11256696-11256766)
chr2 (90-160)||(20244127-20244197)
chr2 (44-158)||(36391592-36391706)
chr2 (30-78)||(19521917-19521965)
chr2 (44-136)||(36390971-36391063)
chr2 (48-128)||(36476696-36476776)
chr2 (31-78)||(16649705-16649752)
chr2 (55-110)||(30486909-30486964)
chr2 (90-160)||(11256176-11256246)
chr2 (29-79)||(16426552-16426602)
chr2 (90-160)||(17918641-17918711)
chr2 (90-160)||(28224344-28224414)
chr2 (90-160)||(33847933-33848003)
chr2 (90-160)||(39476575-39476645)
chr2 (90-160)||(39477281-39477351)
chr2 (30-76)||(41042542-41042588)
chr2 (30-76)||(45139692-45139738)
chr2 (29-62)||(17069120-17069153)
chr2 (30-79)||(30545434-30545483)
chr2 (29-78)||(37157521-37157570)
chr2 (29-134)||(37546508-37546613)
chr2 (30-79)||(40992222-40992271)
chr2 (46-122)||(37545692-37545768)
[»] scaffold0311 (1 HSPs)
scaffold0311 (30-177)||(58-208)
[»] scaffold0332 (1 HSPs)
scaffold0332 (30-172)||(9162-9306)
[»] scaffold0700 (1 HSPs)
scaffold0700 (62-168)||(5351-5457)
[»] scaffold0155 (1 HSPs)
scaffold0155 (29-79)||(17338-17388)
[»] scaffold0007 (1 HSPs)
scaffold0007 (90-160)||(11325-11395)
[»] scaffold2003 (1 HSPs)
scaffold2003 (88-141)||(649-702)


Alignment Details
Target: scaffold0041 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 27221 - 27431
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27221 ggtgccatttaatttgggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacacattcttatcatactctctc 27320  T
Q  130 aacactaaattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgttaacaagttttcc 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  27321 aacactaaattattttttacactatcttccaccctctctctttcatgttctcatactaaatttgtttgatccttgaaaatggtacgctaacaagttttcc 27420  T
Q  230 ggcagcaacca 240  Q
    |||||||||||    
T  27421 ggcagcaacca 27431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 27625 - 27546
Alignment:
Q  28 ttggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaa 107  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  27625 ttggtgccatttaatttggaaaaggagagttttttcccaccatgggaaagttgatcatatccattagattaaatgaggaa 27546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 30 - 240
Target Start/End: Complemental strand, 5035324 - 5035114
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5035324 ggtgccatttaatttgggaaaggagagttcttttccaccataggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 5035225  T
Q  130 aacactaaattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgttaacaagttttcc 229  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  5035224 aacactaaattatgttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttcc 5035125  T
Q  230 ggcagcaacca 240  Q
    |||||||||||    
T  5035124 ggcagcaacca 5035114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 34992312 - 34992163
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  34992312 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 34992213  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || |||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  34992212 aaccactaaattatttttttatactatctttcacactctctctttcatgt 34992163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 30 - 175
Target Start/End: Original strand, 41859310 - 41859457
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | |||| ||||||||||||||    
T  41859310 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccgttagattaaatgaagaacatattcatatcatactctctc 41859409  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcat 175  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||    
T  41859410 aaccactagattatttttttatactatctttcacactctctctttcat 41859457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 32536708 - 32536857
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| ||||||||||||||    
T  32536708 ggtgccatttaatttaggaaatgagagttctttcccaccatgggaaagttgatcatgtccattagattaaatggggaacatattcctatcatactctctc 32536807  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  32536808 aaccactagattatttttttatactatctttcacactctctctttcatgt 32536857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 5034898 - 5035016
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| | |||| ||||||||||||||    
T  5034898 ggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagttgatcatgtccattagattgaatgaggaacatattcatatcatactctctc 5034997  T
Q  130 aa-cactaaattatttttt 147  Q
    || ||||| ||||||||||    
T  5034998 aaccactagattatttttt 5035016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 37 - 177
Target Start/End: Original strand, 37639718 - 37639860
Alignment:
Q  37 tttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaa-cact 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| | |||| ||| |||||||||||| ||||    
T  37639718 tttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatattcattagattaaatgaggaacatattcctatgatactctctcaaccact 37639817  T
Q  136 aaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    | |||| ||||||| |||||||| ||| |||||||||||||||    
T  37639818 agattatttttttatactatctttcacactctctctttcatgt 37639860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 34992014 - 34992133
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    |||||||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||| | |||  |||||||||||||    
T  34992014 tggtgccatttaatttgggaaacgagagttattttccaccatggaaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctct 34992113  T
Q  129 caa-cactaaattatttttt 147  Q
    ||| ||||||||||||||||    
T  34992114 caaccactaaattatttttt 34992133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 38023624 - 38023773
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||| ||||||||||||||||||||| |||||| ||| ||||| |||||||||||||| ||||||||||||||||||| | |||  ||||||||||||||    
T  38023624 ggtgtcatttaatttgggaaaggagaattcttttccatcatggaaaagttgatcatgttcattagattaaatgaggaacatatttctatcatactctctc 38023723  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  38023724 aaccactagattatttttttatactatctttcacactctctctttcatgt 38023773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 41860144 - 41859995
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||| |||||| |||   || |||| |||||||||||||||||||||||||||||||||| | |||  ||||||||| ||||    
T  41860144 ggtgccatttaatttgggaaagaagagttattttttactatggaaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactttctc 41860045  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  41860044 aaccactatattatttttttatactatctttcacactctctctttcatgt 41859995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 34 - 177
Target Start/End: Complemental strand, 32537529 - 32537387
Alignment:
Q  34 ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaa-c 132  Q
    ||||||||||||||||| ||||||||||| |||   || ||||||| ||||||||||||| ||||||| ||||| | ||||||||||||||||||||| |    
T  32537529 ccatttaatttgggaaatgagagttcttttcca---tgagaaagttaatcatgtccattatattaaataaggaacatattcttatcatactctctcaacc 32537433  T
Q  133 actaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    |||| |||| ||||||| |||||||| | | |||||||||||||||    
T  32537432 actagattatttttttatactatctttcgcactctctctttcatgt 32537387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 1365827 - 1365877
Alignment:
Q  28 ttggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  1365827 ttggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt 1365877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 61454 - 61502
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  61454 ggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt 61502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 38024492 - 38024430
Alignment:
Q  116 tatcatactctctcaac-actaaattattttttacactatcttccaccctctctctttcatgt 177  Q
    ||||||||||||||||| |||| ||||||||||| |||||||| ||| |||||||||||||||    
T  38024492 tatcatactctctcaaccactagattattttttatactatctttcacactctctctttcatgt 38024430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 44098469 - 44098432
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccac 67  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44098469 ggtgccatttaatttgggaaaggagagttctttcccac 44098432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 158
Target Start/End: Original strand, 788084 - 788151
Alignment:
Q  88 ccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttc 158  Q
    ||||||||| |||||||||| ||||| ||||| ||| |||||||||||||   ||||||||||||||||||    
T  788084 ccattagatcaaatgaggaacacattattatcctaccctctcaacactaa---attttttacactatcttc 788151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 169
Target Start/End: Complemental strand, 10501877 - 10501822
Alignment:
Q  113 tcttatcatactctctcaacactaaattattttttacactatcttccaccctctctc 169  Q
    ||||||||||||| |||||||||| |||||||||||||||||| || ||||||||||    
T  10501877 tcttatcatactc-ctcaacactagattattttttacactatcatcaaccctctctc 10501822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 25876521 - 25876569
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||||||||||||||||||| ||| || |||||||||||||||||||    
T  25876521 ggtgccatttaatttgggaaagaagatttttttcccaccatgggaaagt 25876569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 39254787 - 39254835
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||| ||||||||||||||||||||| |||||||||||||| |||||||    
T  39254787 ggtggcatttaatttgggaaaggagacttctttcccaccataggaaagt 39254835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 7818534 - 7818604
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||||||| |||||||||||||| ||| || || |||||||||||||    
T  7818534 attagattaagtgaagaacatattcttatcatgctctctcaacactagatttttcttcacactatcttcca 7818604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 10806008 - 10806078
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||||||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  10806008 attagattaaatgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 10806078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 27918096 - 27918046
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    ||||||| |||||||||||||| |||| || ||||||||||||||||||||    
T  27918096 tggtgccgtttaatttgggaaatgagacttttttcccaccatgggaaagtt 27918046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 39852829 - 39852759
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||||| ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  39852829 attagattaagtgaagaatatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 39852759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 38778821 - 38778752
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcc 159  Q
    |||||||||| ||| ||||| ||| ||| |||||||||||||||||| ||| || || ||||||||||||    
T  38778821 attagattaagtgaagaatatatttttaacatactctctcaacactagatttttcttcacactatcttcc 38778752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 42345165 - 42345214
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    ||||||||||||||||||||||| | | |||||||||| |||||||||||    
T  42345165 tggtgccatttaatttgggaaagtaaacttctttcccatcatgggaaagt 42345214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 43924490 - 43924607
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||| ||||||||||||||||||  |||| |||||||||||||||||| | ||  || || |||||||||||   ||| | ||| ||||||||  | |||    
T  43924490 ggtggcatttaatttgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcataaacactc 43924589  T
Q  130 aacactaaattatttttt 147  Q
    ||||| ||||| ||||||    
T  43924590 aacaccaaattttttttt 43924607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 62288 - 62240
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||| ||||||||||| ||||||||| |||||||||||||| |||||||    
T  62288 ggtgacatttaatttgagaaaggagacttctttcccaccataggaaagt 62240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 37640601 - 37640538
Alignment:
Q  38 ttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatg 102  Q
    ||||||||||||||||||||| |||  ||| ||||| |||||||||||||  |||||||||||||    
T  37640601 ttaatttgggaaaggagagtttttttacactatggg-aagttgatcatgtttattagattaaatg 37640538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 39255800 - 39255752
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||| ||||||| |||||||| |||| ||||||||||||||||||||||    
T  39255800 ggtggcatttaacttgggaaatgagacttctttcccaccatgggaaagt 39255752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 44751608 - 44751656
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||| ||||||| ||||||||||||| |||||||||| |||||||||||    
T  44751608 ggtggcatttaacttgggaaaggagacttctttcccatcatgggaaagt 44751656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 28090658 - 28090705
Alignment:
Q  31 gtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    ||||||||||||||||||||| | | |||||||||| |||||||||||    
T  28090658 gtgccatttaatttgggaaagtaaacttctttcccatcatgggaaagt 28090705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 32536981 - 32536946
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    |||||||||||||||||| |||||||||||||||||    
T  32536981 tggtgccatttaatttggaaaaggagagttctttcc 32536946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 147
Target Start/End: Complemental strand, 35943873 - 35943770
Alignment:
Q  44 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattatt 143  Q
    |||||||||||| || |||||||| |||| ||||||  || ||||| || ||| ||||||| || ||| |||||||||  | | |||||||| |||||||    
T  35943873 tgggaaaggagaattgtttcccactatggaaaagtttttcttgtcccttggatcaaatgagaaacacaatcttatcatggtttatcaacacttaattatt 35943774  T
Q  144 tttt 147  Q
    ||||    
T  35943773 tttt 35943770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 36936746 - 36936639
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    ||||||| ||||||||||||||| | | || ||||||| |||||||||||  ||  |  |||||||||| ||| | ||||||| | ||||||||||| ||    
T  36936746 tggtgccgtttaatttgggaaagcaaacttttttcccatcatgggaaagtaaattttaaccattagattcaataaagaatacacttttatcatactccct 36936647  T
Q  129 caacacta 136  Q
    ||| ||||    
T  36936646 caatacta 36936639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 43591036 - 43591137
Alignment:
Q  59 ctttcccaccatgggaaagttga--tca-tgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatc 155  Q
    |||||||||||||||||||||||  ||| ||   |||||||||||||| ||| | ||||||| |||  ||||||||||||| ||| || || ||||||||    
T  43591036 ctttcccaccatgggaaagttgaattcaatg---attagattaaatgaagaacatattcttaacatgatctctcaacactagatttttcttcacactatc 43591132  T
Q  156 ttcca 160  Q
    |||||    
T  43591133 ttcca 43591137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 16889255 - 16889325
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||||||| |||| ||||||||| ||| || || |||||||||||||    
T  16889255 attagattaagtgaagaacatattcttatcatgctctttcaacactagatttttcttcacactatcttcca 16889325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 16889854 - 16889784
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  16889854 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 16889784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 33114214 - 33114144
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  33114214 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 33114144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 38023891 - 38023857
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttc 63  Q
    |||||| ||||||||||||||||||||||||||||    
T  38023891 tggtgctatttaatttgggaaaggagagttctttc 38023857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 39852214 - 39852284
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| ||| |||||||||| ||| ||||| |||||||||||||    
T  39852214 attagattaagtgaagaacatattcttaacatgctccctcaacactagattttttttcacactatcttcca 39852284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 40309526 - 40309456
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  40309526 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 40309456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 158
Target Start/End: Original strand, 40449485 - 40449599
Alignment:
Q  44 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattatt 143  Q
    |||||||| |||||| ||||| ||||||| |||||  ||  |  |||||| |||||||||||||  || ||||||  || || |||||||||| ||||||    
T  40449485 tgggaaagcagagttgtttcctaccatggaaaagtaaattttaaccattaaattaaatgaggaacgcactcttattttattccctcaacactagattatt 40449584  T
Q  144 ttttacactatcttc 158  Q
    |  ||||||||||||    
T  40449585 tcctacactatcttc 40449599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 41092171 - 41092221
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    ||||||||||||||||||||||||   ||| ||||||||||||| ||||||    
T  41092171 tggtgccatttaatttgggaaaggcttgttttttcccaccatggaaaagtt 41092221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 44062045 - 44062115
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  44062045 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 44062115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 44752618 - 44752572
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaa 76  Q
    |||| ||||||| ||||||||||||| |||||||||||||| |||||    
T  44752618 ggtggcatttaacttgggaaaggagacttctttcccaccataggaaa 44752572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 44835479 - 44835429
Alignment:
Q  28 ttggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    ||||||||||||||||||| |||| | | |||||||||| |||||||||||    
T  44835479 ttggtgccatttaatttggaaaagcaaacttctttcccatcatgggaaagt 44835429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 36936467 - 36936371
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactc 125  Q
    ||||||| ||||||||||||||| | | || ||||||| |||||||||||  ||  |  |||||||||| ||| | ||||||| | |||||||||||    
T  36936467 tggtgccgtttaatttgggaaagcaaacttttttcccatcatgggaaagtaaattttaaccattagattcaataaagaatacacttttatcatactc 36936371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 42346608 - 42346560
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||||||||||||||||||| | | |||||| ||| |||||||||||    
T  42346608 ggtgccatttaatttgggaaagcaaacttcttttccatcatgggaaagt 42346560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 43925059 - 43924995
Alignment:
Q  37 tttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaat 101  Q
    ||||||||||||||||  |||| |||||||||||| ||||||| ||  || || |||||||||||    
T  43925059 tttaatttgggaaagggaagttgtttcccaccatgagaaagttaattttgaccgttagattaaat 43924995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 32 - 240
Target Start/End: Complemental strand, 7677855 - 7677647
Alignment:
Q  32 tgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  7677855 tgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgttcattagattaaatgaggaacacattcttatcatattctctcaa 7677756  T
Q  132 cactaaattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgttaacaagttttccgg 231  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  7677755 cactaaattattttttacaatatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgctaacaagttttccga 7677656  T
Q  232 cagcaacca 240  Q
    |||||||||    
T  7677655 cagcaacca 7677647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 29 - 240
Target Start/End: Complemental strand, 38072340 - 38072128
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38072340 tggtgccatttaatttgggaaatgagagttcttttccaccatgggaaagttgatcatgtccattagattaaatgatgaatacattcttatcatactctct 38072241  T
Q  129 caac-actaaattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgttaacaagtttt 227  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38072240 caaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgctaacaagtttt 38072141  T
Q  228 ccggcagcaacca 240  Q
    |||||||||||||    
T  38072140 ccggcagcaacca 38072128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 4261209 - 4261416
Alignment:
Q  34 ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaac- 132  Q
    ||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4261209 ccatttaatttaggaaaggagagttcttttctaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacc 4261308  T
Q  133 actaaattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgttaacaagttttccggc 232  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||    
T  4261309 actagattattttttacactatcttccaacctctctctttcatgttctcacactatatttgtttgatccttgaaaatggtatgctaacaagttttccggc 4261408  T
Q  233 agcaacca 240  Q
    ||||||||    
T  4261409 agcaacca 4261416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 17145622 - 17145772
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  17145622 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 17145721  T
Q  130 aa-cactaaatta--ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| ||||  ||||||| |||||||| ||| |||||||||||||||    
T  17145722 aaccactagattattttttttatactatctttcacactctctctttcatgt 17145772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 30 - 143
Target Start/End: Complemental strand, 38779611 - 38779498
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  38779611 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatattcttataatactctctc 38779512  T
Q  130 aacactaaattatt 143  Q
    ||||||| ||||||    
T  38779511 aacactagattatt 38779498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 668179 - 668328
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| ||||||||||||||    
T  668179 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaagaacatattcctatcatactctctc 668278  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||| | |||| ||||||| |||||||| ||| |||||||||||||||    
T  668279 aaccaccagattatttttttatactatctttcacactctctctttcatgt 668328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 38071898 - 38072047
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  38071898 ggtgccatttaatttaggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 38071997  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  38071998 aaccactagattatttttttatactatctttcacactctctctttcatgt 38072047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 41194513 - 41194659
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| ||    
T  41194513 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttaatcatgtccattaaatt-aatgaggaacatattcttatcatactctttc 41194611  T
Q  130 aacactaaattattttttacactatcttccaccctctctctttcatgt 177  Q
     |||||||||||||||||| | |||||| || | ||||||||||||||    
T  41194612 cacactaaattattttttatattatctttcatcatctctctttcatgt 41194659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 37864355 - 37864206
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||| ||||||||||||||    
T  37864355 ggtgccatttaatttgggaaataagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctctc 37864256  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  37864255 aaccactagattatttttttatactatctttcacactctctctttcatgt 37864206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 4261644 - 4261495
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||  ||||||||||||||    
T  4261644 ggtgccatttaatttaggaaaggagagttctttcccaccatgggaaagttgatcatctccattagattaaatgaggaacatatttctatcatactctctc 4261545  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || || || |||| ||||||| |||||||| ||| |||||||||||||||    
T  4261544 aaccattagattatttttttatactatctttcacactctctctttcatgt 4261495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 669151 - 669002
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||| |||||||||| |||||||||| | |||| ||||||||||||||    
T  669151 ggtgccatttaatttgggaaatgagagttttttcccaccataggaaagttgatcatatccattagatcaaatgaggaacatattcctatcatactctctc 669052  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  669051 aaccactagattatttttttatactatctttcacactctctctttcatgt 669002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 34 - 177
Target Start/End: Original strand, 7677421 - 7677566
Alignment:
Q  34 ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaa-c 132  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||| | |||  |||||||||||||||| |    
T  7677421 ccatttaatttgggaaaggagaattctttcccaccatgaaaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaacc 7677520  T
Q  133 actaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    ||||||||| ||||||| ||||||||  || |||||||||||||||    
T  7677521 actaaattatttttttatactatcttttacactctctctttcatgt 7677566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 38778854 - 38778971
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  | |||| ||||||||||||||    
T  38778854 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggagcatattcctatcatactctctc 38778953  T
Q  130 aa-cactaaattattttt 146  Q
    || ||||| |||||||||    
T  38778954 aaccactagattattttt 38778971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 37469053 - 37468972
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaataca 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37469053 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaataca 37468972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 17145920 - 17145802
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||  || | |||| ||||||||||||||    
T  17145920 ggtgccatttaatttgggaaaggagagttcttttttactatgggaaagttgatcatgtccattagattaaatgaataacatattcctatcatactctctc 17145821  T
Q  130 aa-cactaaattatttttt 147  Q
    || ||||| ||||||||||    
T  17145820 aaccactagattatttttt 17145802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 32859274 - 32859380
Alignment:
Q  71 gggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttccaccctctctct 170  Q
    ||||||||||||  | | |||||||||||||| |||| ||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  32859274 gggaaagttgatagtatgcattagattaaatgtggaacacattcttatactactctctcaacattaaattattttttacactatcttccaccctctcact 32859373  T
Q  171 ttcatgt 177  Q
    |||||||    
T  32859374 ttcatgt 32859380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 37468910 - 37468967
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgt 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37468910 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgt 37468967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 141
Target Start/End: Complemental strand, 24322400 - 24322288
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    ||||||||||||||||||||||||  |||| | |||||||||||||||| |  |  || || |||||| |||||||||| ||||| ||||||||||||||    
T  24322400 tggtgccatttaatttgggaaaggttagttttatcccaccatgggaaaggtttttttgaccgttagatcaaatgaggaacacatttttatcatactctct 24322301  T
Q  129 caacactaaatta 141  Q
    || ||||| ||||    
T  24322300 catcactagatta 24322288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 147
Target Start/End: Original strand, 42607095 - 42607198
Alignment:
Q  44 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattatt 143  Q
    ||||||||| || || ||||||||||||||||||||| |  |||||||||||| ||||||| || ||| |||||||||  ||| ||||||||  ||||||    
T  42607095 tgggaaaggggaattgtttcccaccatgggaaagttgtttttgtccattagatcaaatgagaaacacaatcttatcatgatctatcaacacttgattatt 42607194  T
Q  144 tttt 147  Q
    ||||    
T  42607195 tttt 42607198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 41195414 - 41195275
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatac--attcttatcatactctc 127  Q
    |||||||||||||||||||||| | | |||||||||| ||||| |||||  |||    |||||||||| || |||||| |   ||| |||||||||||||    
T  41195414 ggtgccatttaatttgggaaagcaaacttctttcccatcatggaaaagtaaatctcaaccattagattcaa-gaggaacattgatt-ttatcatactctc 41195317  T
Q  128 tcaacactaaattattttttacactatcttccaccctctctc 169  Q
    || |||||| ||||||||||| |||||||| || ||||||||    
T  41195316 tccacactagattattttttatactatctttcatcctctctc 41195275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 44909407 - 44909309
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    |||||| ||||||||||||||||  |||| |||||||||||||||||| |  |  || || || ||| |||||||||||||||| | ||||||||||||    
T  44909407 ggtgccgtttaatttgggaaaggtaagttttttcccaccatgggaaaggtttttttggccgttggatcaaatgaggaatacattttaatcatactctct 44909309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 40257836 - 40257759
Alignment:
Q  44 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcat 121  Q
    ||||||| | ||||| |||||||||||| |||||||| |  |||||||||||| ||||||| || |||||||||||||    
T  40257836 tgggaaatgggagttgtttcccaccatgagaaagttgtttttgtccattagatcaaatgagaaacacattcttatcat 40257759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 27599211 - 27599303
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcata 122  Q
    |||| |||||||  ||||||||| ||||| |||||||||||||||||||| |   || |||||||||||| | | ||| ||||||||||||||    
T  27599211 ggtggcatttaaaatgggaaaggggagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaacacattcttatcata 27599303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 134
Target Start/End: Complemental strand, 27600143 - 27600039
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||| |||||||  ||||||||| ||||| |||||||||||||||||||| |   || ||| |||||||| | | ||| ||||||||||||||  |||||    
T  27600143 ggtggcatttaaaatgggaaaggggagttgtttcccaccatgggaaagttaaatttgaccactagattaagtaatgaacacattcttatcatagactctc 27600044  T
Q  130 aacac 134  Q
    |||||    
T  27600043 aacac 27600039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 147
Target Start/End: Original strand, 40257594 - 40257697
Alignment:
Q  44 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattatt 143  Q
    ||||||| ||||||| ||| | ||||||| ||||||  |  |||||||||||| ||||||| || |||||||||||||  ||| ||||||||  ||||||    
T  40257594 tgggaaatgagagttgttttcgaccatggaaaagttatttttgtccattagatcaaatgagaaacacattcttatcatgatctatcaacacttgattatt 40257693  T
Q  144 tttt 147  Q
    ||||    
T  40257694 tttt 40257697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 27855625 - 27855695
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||||||| |||||||||||||| ||| || || |||||||||||||    
T  27855625 attagattaagtgaagaacatattcttatcatgctctctcaacactagatttttcttcacactatcttcca 27855695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 29315359 - 29315249
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||| ||||||||||||||||   |||| ||||||| |||||||||||   |  |  |||||||||  ||||| ||||||| ||||||||||||| |||    
T  29315359 ggtgcaatttaatttgggaaagactagttttttcccatcatgggaaagtaagttttaaccattagatctaatgaagaatacactcttatcatactccctc 29315260  T
Q  130 aacactaaatt 140  Q
    |||||| ||||    
T  29315259 aacactcaatt 29315249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 668453 - 668420
Alignment:
Q  31 gtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||||||||||||||||||||||||||||||||    
T  668453 gtgccatttaatttgggaaaggagagttctttcc 668420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 20890206 - 20890247
Alignment:
Q  37 tttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  20890206 tttaatttgggaaaggacagttttttcccaccatgggaaagt 20890247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 29006347 - 29006396
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    |||||||||||||||||||||||   ||| ||||||||||||||||||||    
T  29006347 ggtgccatttaatttgggaaaggcttgttttttcccaccatgggaaagtt 29006396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 33323915 - 33323807
Alignment:
Q  69 atgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattatt--ttttacactatcttccaccctct 166  Q
    |||| ||| ||||| |||||  ||||||||||||||||| | ||||||||    ||||| |||||||| ||||||  |||||||||||||| ||  ||||    
T  33323915 atggaaaaattgattatgtctgttagattaaatgaggaacatattcttattccgctctcacaacactatattatttattttacactatctttcattctct 33323816  T
Q  167 ctctttcat 175  Q
    |||||||||    
T  33323815 ctctttcat 33323807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 147
Target Start/End: Original strand, 6729412 - 6729515
Alignment:
Q  44 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattatt 143  Q
    |||||||||||| || ||| |||| |||||||||||  || ||||| || ||| ||||||| || ||| |||||||||  | | |||||||| |||||||    
T  6729412 tgggaaaggagaattgttttccactatgggaaagtttttcttgtcccttggatcaaatgagaaacacaatcttatcatggtttatcaacacttaattatt 6729511  T
Q  144 tttt 147  Q
    ||||    
T  6729512 tttt 6729515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 42455040 - 42455083
Alignment:
Q  35 catttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    ||||||||||||||||||||| |||||| | |||||||||||||    
T  42455040 catttaatttgggaaaggagacttcttttctaccatgggaaagt 42455083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 45888028 - 45887981
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 77  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  45888028 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 45887981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 47332001 - 47331954
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 77  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  47332001 ggtgacatttaatttgggaaaggctagttttttcccaccatgggaaag 47331954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 4895108 - 4895038
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  4895108 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 4895038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 145
Target Start/End: Original strand, 20900464 - 20900550
Alignment:
Q  59 ctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattatttt 145  Q
    |||||||| |||||||||||| ||  || || |||||| |||| | ||| ||||| |||| |||||||||| |||||||||| ||||    
T  20900464 ctttcccatcatgggaaagtttatattgacctttagatcaaatcaagaacacatttttataatactctctccacactaaattttttt 20900550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 24044069 - 24043999
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  24044069 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 24043999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 32499898 - 32499829
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| ||||| |||||||||||||    
T  32499898 attagattaagtgaagaacatattcttaacatgctctctcaacactagatt-tttttcacactatcttcca 32499829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 36682895 - 36682965
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  36682895 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 36682965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 46815088 - 46815018
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||||||| ||| | ||||||| ||| ||||||||||| || ||| || || |||||||||||||    
T  46815088 attagattaaatgaagaacatattcttaacatgctctctcaacattagatttttcttaacactatcttcca 46815018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 47814031 - 47814101
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  47814031 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 47814101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 29007247 - 29007198
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    |||| ||||||||||||||||||   ||| ||||||||||||||||||||    
T  29007247 ggtgtcatttaatttgggaaaggcttgttttttcccaccatgggaaagtt 29007198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 37864092 - 37864125
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttc 63  Q
    |||||||||||||||||||||||| |||||||||    
T  37864092 ggtgccatttaatttgggaaaggaaagttctttc 37864125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 41224891 - 41224842
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    |||||||||||||||||||||||    || ||||||||||||||||||||    
T  41224891 ggtgccatttaatttgggaaaggcttattttttcccaccatgggaaagtt 41224842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 161
Target Start/End: Original strand, 44541002 - 44541119
Alignment:
Q  44 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattatt 143  Q
    ||||||||||||||| ||||||||||||  ||| ||| |  | | |||||||| |||| || || ||| |||||||||   || |||||||| |||||||    
T  44541002 tgggaaaggagagttgtttcccaccatgaaaaaattgtttttattcattagatcaaataagaaacacaatcttatcatggcctatcaacacttaattatt 44541101  T
Q  144 ttttacactatcttccac 161  Q
    ||| ||  ||||||||||    
T  44541102 tttcactttatcttccac 44541119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 8464445 - 8464501
Alignment:
Q  88 ccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattt 144  Q
    |||||||||||| ||| || |||| ||||||||||| ||| |||||||| |||||||    
T  8464445 ccattagattaattgaagagtacaatcttatcatacactcccaacactatattattt 8464501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 45887286 - 45887326
Alignment:
Q  37 tttaatttgggaaaggagagttctttcccaccatgggaaag 77  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  45887286 tttaatttgggaaaggctagttttttcccaccatgggaaag 45887326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 179; Significance: 1e-96; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 35 - 240
Target Start/End: Original strand, 36750050 - 36750256
Alignment:
Q  35 catttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaac-a 133  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  36750050 catttaatttgggaaaggagagttcttttccaccatggaaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacca 36750149  T
Q  134 ctaaattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgttaacaagttttccggca 233  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36750150 ctagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgctaacaagttttccggca 36750249  T
Q  234 gcaacca 240  Q
    |||||||    
T  36750250 gcaacca 36750256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 30 - 240
Target Start/End: Complemental strand, 52492327 - 52492116
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||| |||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  52492327 ggtgtcatttaatttgggaaatgagagttcttttccaccatggaaaagttgttcatgtccattagattaaatgaggaatacattcttatcatactctctc 52492228  T
Q  130 aac-actaaattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgttaacaagttttc 228  Q
    ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52492227 aaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgctaacaagttttc 52492128  T
Q  229 cggcagcaacca 240  Q
    ||||||||||||    
T  52492127 cggcagcaacca 52492116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 36750485 - 36750337
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||||||||||||||    
T  36750485 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgttcattagattaaatgaggaacatatttctatcatactctctc 36750386  T
Q  130 aa-cactaaattattttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| ||||||||||| |||||||| ||| |||||||||||||||    
T  36750385 aaccactagattattttttatactatctttcacactctctctttcatgt 36750337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 19132860 - 19132711
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  19132860 ggtgccatttaatttgggaaaggaaagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcttatcatactctctc 19132761  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||  |||| ||||||| | |||||| |||  ||||||||||||||    
T  19132760 aaccactggattatttttttatattatctttcacattctctctttcatgt 19132711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 34 - 177
Target Start/End: Complemental strand, 32490239 - 32490094
Alignment:
Q  34 ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaa-c 132  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||| |||||||||||||||| |    
T  32490239 ccatttaatttgggaaaggagagttctttcccaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaacc 32490140  T
Q  133 actaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    |||| |||| ||||||| |||||||| ||| ||| |||||||||||    
T  32490139 actagattatttttttatactatctttcacactccctctttcatgt 32490094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 31 - 185
Target Start/End: Original strand, 38922744 - 38922900
Alignment:
Q  31 gtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctca 130  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| || | |||| |||||||||||||||    
T  38922744 gtgccatttaatttgggaaaggagagttatttcctaccatgggaaagttgatcatatccattagattaaatgagaaacatattcctatcatactctctca 38922843  T
Q  131 a-cactaaatta-ttttttacactatcttccaccctctctctttcatgttctcacac 185  Q
    | ||||| |||| ||||||| |||||||| ||| ||||||||||||||| |||||||    
T  38922844 accactagattatttttttatactatctttcacactctctctttcatgtcctcacac 38922900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 31 - 177
Target Start/End: Original strand, 45242067 - 45242215
Alignment:
Q  31 gtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctca 130  Q
    |||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||    
T  45242067 gtgccatttaatttgggaaatgagagttcttttccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctca 45242166  T
Q  131 a-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    | ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  45242167 accactagattatttttttatactatctttcacactctctctttcatgt 45242215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 177
Target Start/End: Complemental strand, 38923715 - 38923564
Alignment:
Q  28 ttggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctc 127  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| | |||  ||||||||||||    
T  38923715 ttggtgccatttaatttgggaaatgagagttctttcccaccatggaaaagttgataatgttcattagattaaatgaggaacatatttctatcatactctc 38923616  T
Q  128 tcaa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    |||| ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  38923615 tcaaccactagattatttttttatactatctttcacactctctctttcatgt 38923564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 19132563 - 19132681
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  19132563 ggtgccatttaatttgggaaaggagagttctttcctactatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 19132662  T
Q  130 aa-cactaaattatttttt 147  Q
    || ||||| ||||||||||    
T  19132663 aaccactagattatttttt 19132681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 29 - 177
Target Start/End: Complemental strand, 45243036 - 45242886
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| || |||||||||||||||||| | |||| |||||||||||||    
T  45243036 tggtgccatttaatttgggaaagaagagttcttttccaccatgggaaagttgatcatatctattagattaaatgaggaacatattcctatcatactctct 45242937  T
Q  129 caa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    ||| ||||| |||| ||||||| | |||||| ||| |||||||||||||||    
T  45242936 caaccactagattatttttttatattatctttcacactctctctttcatgt 45242886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 41755499 - 41755648
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||| |||||||||||||||||||||||| |||||||||||| |||| |||||||||| ||||||||||||||||||| | |||  ||||||||||||||    
T  41755499 ggtgtcatttaatttgggaaaggagagttttttcccaccatgagaaaattgatcatgttcattagattaaatgaggaacatatttctatcatactctctc 41755598  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  41755599 aaccactatattatttttttatactatctttcacactctctctttcatgt 41755648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 41756480 - 41756331
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||| ||||||| || ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  41756480 ggtgtcatttaagttaggaaaggagagttctttcccatcatgggaaagttgatcatgttcattagattaaatgaggaacatattcctatcatactctctc 41756381  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || || || |||| ||||||| |||||||| ||| |||||||||||||||    
T  41756380 aaccattagattatttttttatactatctttcacactctctctttcatgt 41756331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 44687211 - 44687062
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| | ||||||||||||||||||| | |||| ||||||||||||||    
T  44687211 ggtgccatttaatttgggaaaggagaattcttttccaccatggaaaagttgatcatattcattagattaaatgaggaaaatattcctatcatactctctc 44687112  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || || || |||| ||||||| |||||||| ||| |||||||||||||||    
T  44687111 aaccattagattatttttttatactatctttcacactctctctttcatgt 44687062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 177
Target Start/End: Original strand, 3970994 - 3971141
Alignment:
Q  32 tgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaa 131  Q
    ||||||||||||||||||| ||||||| |||  |||||||| |||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||    
T  3970994 tgccatttaatttgggaaatgagagttttttttcaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaa 3971093  T
Q  132 -cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
     ||||  |||| ||||||| |||||||| ||| |||||||||||||||    
T  3971094 ccacttgattatttttttatactatctttcacactctctctttcatgt 3971141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 32489946 - 32490064
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||| | |||  ||||||||||||||    
T  32489946 ggtgccatttaatttgggaaaggagaattcttttccaccatgggaaagttgatcatgtccattagattaaataaggaacatatttctatcatactctctc 32490045  T
Q  130 aa-cactaaattatttttt 147  Q
    || |||| |||||||||||    
T  32490046 aaccactgaattatttttt 32490064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 3971950 - 3971801
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||| ||||| || ||||||||||||  ||||||||||||||||| ||||||||||||||||||||| | |||  ||||||||||||||    
T  3971950 ggtgccatttaatttaggaaatgaaagttctttcccatgatgggaaagttgatcatatccattagattaaatgaggaacatatttctatcatactctctc 3971851  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  3971850 aaccactagattatttttttatactatctttcacactctctctttcatgt 3971801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 3997928 - 3998077
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||| ||||| || ||||||||||||  ||||||||||||||||| ||||||||||||||||||||| | |||  ||||||||||||||    
T  3997928 ggtgccatttaatttaggaaatgaaagttctttcccatgatgggaaagttgatcatatccattagattaaatgaggaacatatttctatcatactctctc 3998027  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  3998028 aaccactagattatttttttatactatctttcacactctctctttcatgt 3998077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 44686255 - 44686403
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||| ||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||| || | |||| ||||||||||||||    
T  44686255 ggtgccatttaatttggaaaaggagagtttttttc-accatgagaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctctc 44686353  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  44686354 aaccactagattatttttttatactatctttcacactctctctttcatgt 44686403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 177
Target Start/End: Complemental strand, 3998887 - 3998740
Alignment:
Q  32 tgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaa 131  Q
    ||||||||||||||||||| ||||||| |||  |||||||| |||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||    
T  3998887 tgccatttaatttgggaaatgagagttttttttcaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaa 3998788  T
Q  132 -cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
     ||||  |||| ||||||| ||||||||  || |||||||||||||||    
T  3998787 ccacttgattatttttttatactatcttttacactctctctttcatgt 3998740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 45500507 - 45500620
Alignment:
Q  64 ccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttccaccc 163  Q
    |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||  |||||||||||||||| |||||| |||   |||||||||||||    
T  45500507 ccacaatgggaaagttgattatgtccattagattaaatgaggaacacattcttattctactctctcaacactagattattgttttatctatcttccaccc 45500606  T
Q  164 tctctctttcatgt 177  Q
    ||||||||||||||    
T  45500607 tctctctttcatgt 45500620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 52491891 - 52492035
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||     ||| |||||||||||||||||||||||||||| ||||| | |||  ||||||||||||||    
T  52491891 ggtgccatttaatttgggaaaggagagttctttcc-----tggaaaagttgatcatgtccattagattaaataaggaacatatttctatcatactctctc 52491985  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  52491986 aaccactagattatttttttatactatctttcacactctctctttcatgt 52492035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 8436678 - 8436574
Alignment:
Q  64 ccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttccaccc 163  Q
    ||||||||  ||||||||| |||| |||| ||||||||| |||| ||||| ||||  |||| |||||||| || |||||||||||||||||||||||| |    
T  8436678 ccaccatgaaaaagttgataatgtgcatttgattaaatgtggaacacatttttatactactttctcaacattagattattttttacactatcttccactc 8436579  T
Q  164 tctct 168  Q
    |||||    
T  8436578 tctct 8436574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 168
Target Start/End: Complemental strand, 8440222 - 8440119
Alignment:
Q  65 caccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttccaccct 164  Q
    |||||||  ||||||||| |||| |||| ||||||||| |||| ||||| ||||  ||||||||||||| || |||||||||||||||||||| ||| ||    
T  8440222 caccatgaaaaagttgataatgtgcatttgattaaatgtggaacacattattatactactctctcaacattagattattttttacactatctttcactct 8440123  T
Q  165 ctct 168  Q
    ||||    
T  8440122 ctct 8440119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 31556265 - 31556217
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 77  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31556265 tggtgccatttaatttgggaaaggagagttctttcccatcatgggaaag 31556217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 177
Target Start/End: Complemental strand, 8653710 - 8653622
Alignment:
Q  88 ccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttccaccctctctctttcatgt 177  Q
    ||||| ||| ||||||| || ||| |||||||||| || |||||||||| || ||||| ||||||||||||| |||||||||||||||||    
T  8653710 ccatttgatcaaatgagaaacacactcttatcatattccctcaacactagatcattttctacactatcttcc-ccctctctctttcatgt 8653622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 8427276 - 8427346
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||||||| ||| | ||||||||||| |||||||||||||| ||| || || |||||||||||||    
T  8427276 attagattaaatgaagaacatattcttatcatgctctctcaacactagatttttcttcacactatcttcca 8427346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 17226968 - 17227014
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaa 76  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||    
T  17226968 ggtggcatttaatttgggaaaggagatttctttcccaccatgggaaa 17227014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 177
Target Start/End: Complemental strand, 11267676 - 11267588
Alignment:
Q  88 ccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttccaccctctctctttcatgt 177  Q
    |||||||||||||| | ||  | | |||||||||||||  ||| ||||| |||||||||||||||||||||| ||||||||||| |||||    
T  11267676 ccattagattaaataaagagcatactcttatcatactccatcaccactatattattttttacactatcttcc-ccctctctcttccatgt 11267588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 31556186 - 31556235
Alignment:
Q  28 ttggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 77  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||||||    
T  31556186 ttggtgccatttaatttggaaaaggagagttctttcccatgatgggaaag 31556235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 38923437 - 38923472
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  38923437 tggtgccatttaatttgggaaaggagagttctttcc 38923472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 45242342 - 45242307
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  45242342 tggtgccatttaatttgggaaaggagagttctttcc 45242307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 17227997 - 17227955
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatg 71  Q
    ||||| ||||||||||||||||||||| |||||||||||||||    
T  17227997 tggtggcatttaatttgggaaaggagacttctttcccaccatg 17227955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 25025234 - 25025304
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| ||||| |||||||||||||    
T  25025234 attagattaagtgaagaacatattcttaacatgctctctcaacactagattttttttcacactatcttcca 25025304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 31014950 - 31014880
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||||||| || || |||||||||||||    
T  31014950 attagattaagtgaagaacatattcttaccatgctctctcaacactaaatttttcttcacactatcttcca 31014880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 47737699 - 47737629
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||||||| |||||||||||||| ||| || || |||||||||||||    
T  47737699 attagattaagtgaagaacatattcttatcatgctctctcaacactagatttttcttcacactatcttcca 47737629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 14667297 - 14667345
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    |||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  14667297 ggtgccgtttaatttgggaaaggaga-ttttttcccaccatgggaaagtt 14667345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 37105125 - 37105076
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    |||||| |||||||||||||| |||| || ||||||||||||||||||||    
T  37105125 ggtgccgtttaatttgggaaacgagacttttttcccaccatgggaaagtt 37105076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 49756275 - 49756324
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    ||||||||||||||||| ||||||  ||| ||||||||||||||||||||    
T  49756275 ggtgccatttaatttggaaaaggaatgttatttcccaccatgggaaagtt 49756324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 49757230 - 49757181
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    |||||| ||||||||||||||||||| || ||||| ||||||||||||||    
T  49757230 ggtgccgtttaatttgggaaaggagacttttttcctaccatgggaaagtt 49757181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 39901846 - 39901894
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||| |||||  ||||||| |||||||||||||||||||||||||||    
T  39901846 ggtgccgtttaacctgggaaatgagagttctttcccaccatgggaaagt 39901894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 42145325 - 42145277
Alignment:
Q  31 gtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    ||||||||||||||||||||||||| || ||| ||||||| ||||||||    
T  42145325 gtgccatttaatttgggaaaggagactttttttccaccataggaaagtt 42145277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 43638126 - 43638078
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||||||||||||||||||| | | |||||||||| |||||||||||    
T  43638126 ggtgccatttaatttgggaaagtaaacttctttcccatcatgggaaagt 43638078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 3971268 - 3971233
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||| ||||||||||||||||||||||||||||||    
T  3971268 tggtgtcatttaatttgggaaaggagagttctttcc 3971233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 3998613 - 3998648
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||| ||||||||||||||||||||||||||||||    
T  3998613 tggtgtcatttaatttgggaaaggagagttctttcc 3998648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 136
Target Start/End: Original strand, 8652841 - 8652916
Alignment:
Q  61 ttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacacta 136  Q
    ||||||||||||||||||  ||  |  ||||| |||||||||||||| ||||| | ||| ||||||||||||||||    
T  8652841 ttcccaccatgggaaagtaaattttcaccatttgattaaatgaggaacacattttaatcctactctctcaacacta 8652916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 41755764 - 41755729
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||||||||||||||||||||||||||| ||||||    
T  41755764 tggtgccatttaatttgggaaaggagagtactttcc 41755729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 50305214 - 50305167
Alignment:
Q  130 aacactaaattattttttacactatcttccaccctctctctttcatgt 177  Q
    ||||||| |||||| ||||| ||||||||||||||||||||| |||||    
T  50305214 aacactatattattctttacgctatcttccaccctctctcttccatgt 50305167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 3944955 - 3945025
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  3944955 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 3945025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 8427769 - 8427699
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  8427769 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 8427699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 19555949 - 19555879
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  19555949 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 19555879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 31014397 - 31014467
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| |||  ||||||||||||||||| || || |||||||||||||    
T  31014397 attagattaagtgaagaacatattcttaacatgttctctcaacactaaatttttcttcacactatcttcca 31014467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 37374875 - 37374945
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  37374875 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 37374945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 41875642 - 41875572
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  41875642 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 41875572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 42356835 - 42356765
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    ||||||||||||||  |||| |||| || ||| |||||||||||||| ||| || || |||||||||||||    
T  42356835 attagattaaatgaataatatattcctagcattctctctcaacactagatttttcttcacactatcttcca 42356765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 44868644 - 44868574
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  44868644 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttaacactatcttcca 44868574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 48219261 - 48219191
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||||| ||||||| ||| |||||||||||||| | | || || |||||||||||||    
T  48219261 attagattaagtgatgaatatattcttaacatgctctctcaacactagacttttcttcacactatcttcca 48219191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 49752333 - 49752403
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  49752333 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 49752403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 49752936 - 49752866
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||||| ||| ||| ||| |||||||||||||| ||| || || |||||||||||||    
T  49752936 attagattaagtgaagaatatatttttaacatgctctctcaacactagatttttcttcacactatcttcca 49752866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 50687734 - 50687664
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  50687734 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 50687664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 55281895 - 55281965
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  55281895 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 55281965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 30847901 - 30847853
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||||||||||||||||||| | | ||| |||||| |||||||||||    
T  30847901 ggtgccatttaatttgggaaagcaaacttccttcccatcatgggaaagt 30847853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 38336943 - 38337015
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaat 101  Q
    ||||| ||||||||||||| ||||  |||| |||||||||||||||||| | ||  || || |||||||||||    
T  38336943 tggtggcatttaatttggggaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaat 38337015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 38337518 - 38337454
Alignment:
Q  37 tttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaat 101  Q
    ||||||||||||||||  |||| |||||||||||||||||| | ||  || || |||||||||||    
T  38337518 tttaatttgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaat 38337454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 42356296 - 42356364
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttc 158  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||    
T  42356296 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttc 42356364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 8e-76; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 34 - 185
Target Start/End: Original strand, 33001936 - 33002087
Alignment:
Q  34 ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaaca 133  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33001936 ccatttaatttgggaaaggagagttctttcccaccatggaaaagttgatcatgtccattagattaaatgaggaatacattcttatcatattctctcaaca 33002035  T
Q  134 ctaaattattttttacactatcttccaccctctctctttcatgttctcacac 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33002036 ctaaattattttttacactatcttccaccctctctctttcatgttctcacac 33002087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 8040195 - 8040344
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8040195 ggtgccatttaatttgggaaaggacagttctttcccatcgtgggaaagttgatcatgtccattagattaaatgaggaatatattcttatcatactctctc 8040294  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  8040295 aaccactacattatttttttatactatctttcacactctctctttcatgt 8040344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 15184065 - 15183916
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  15184065 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 15183966  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| |||||||  ||||||| ||| |||||||||||||||    
T  15183965 aaccactagattatttttttatgctatctttcacactctctctttcatgt 15183916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 33002864 - 33002715
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  33002864 ggtgtcatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 33002765  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  33002764 aaccactagattatttttttatactatctttcacactctctctttcatgt 33002715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 30 - 175
Target Start/End: Original strand, 8204120 - 8204267
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||| ||||    
T  8204120 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactatctc 8204219  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcat 175  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||    
T  8204220 aaccactagattatttttttatactatctttcacactctctctttcat 8204267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 29 - 177
Target Start/End: Original strand, 686416 - 686565
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||    
T  686416 tggtgccatttaatttgggaaaggagagtt-tttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatattcctatcatattctct 686514  T
Q  129 caa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    ||| ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  686515 caaccactagattatttttttatactatctttcacactctctctttcatgt 686565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 31 - 177
Target Start/End: Complemental strand, 687395 - 687247
Alignment:
Q  31 gtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctca 130  Q
    |||||||||||||||||||||||||||||||| |||| |||| ||||||||| |||||||||||||||||||||||| | |||| |||||||||||||||    
T  687395 gtgccatttaatttgggaaaggagagttcttttccactatggaaaagttgattatgtccattagattaaatgaggaacatattcctatcatactctctca 687296  T
Q  131 a-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    | |||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  687295 atcactaaattatttttttatactatctttcacactctctctttcatgt 687247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 36626678 - 36626576
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||| |||||||||||||||||||    
T  36626678 ggtgccatttaatttgggaaatgagagttctttcccaccatgggaaagttgatcatgtccgttatattaaataaggaatatattcttatcatactctctc 36626579  T
Q  130 aac 132  Q
    |||    
T  36626578 aac 36626576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 12190206 - 12190078
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||  ||||||||||||||    
T  12190206 ggtgccatttaatttgggaaaagagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctc 12190107  T
Q  130 aa-cactaaattattttttacactatctt 157  Q
    || || || ||||||||||| | ||||||    
T  12190106 aatcattagattattttttatattatctt 12190078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 15183088 - 15183238
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttc-tttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    |||||||||||||||||||||||||||||  ||||||| |||| ||||||||||||||||||||||||||||||||||| | |||  |||||||||||||    
T  15183088 ggtgccatttaatttgggaaaggagagtttatttcccatcatgagaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctct 15183187  T
Q  129 caa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    ||| ||||| |||| ||||||| |||||||| ||| ||||| |||||||||    
T  15183188 caaccactagattatttttttatactatctttcacactctcactttcatgt 15183238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 8040492 - 8040374
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||| | |||||||||||| |||||||||| |||||||||||||||||||||  |||| | |||  ||||||||||||||    
T  8040492 ggtgccatttaatttgggaaaggaaatttctttcccaccgtgggaaagttaatcatgtccattagattaaatagggaacatatttctatcatactctctc 8040393  T
Q  130 aa-cactaaattatttttt 147  Q
    || ||||| ||||||||||    
T  8040392 aaccactagattatttttt 8040374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 33284071 - 33283960
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||  |||| | |||||||||||||||| |  |  || || |||||| |||||||||| ||||| |||||||||||||||    
T  33284071 ggtgccatttaatttgggaaaggttagttttatcccaccatgggaaaggtttttttgaccgttagatcaaatgaggaacacatttttatcatactctctc 33283972  T
Q  130 aacactaaatta 141  Q
    | ||||||||||    
T  33283971 atcactaaatta 33283960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 39950403 - 39950451
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39950403 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 39950451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 33002584 - 33002634
Alignment:
Q  190 tttgtttgatccttgaaaatggtacgttaacaagttttccggcagcaacca 240  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33002584 tttgtttgatccttgaaaatggtacgctaacaagttttccggcagcaacca 33002634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 141
Target Start/End: Original strand, 33283169 - 33283276
Alignment:
Q  34 ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaaca 133  Q
    |||||||||||||||||||  |||| | ||||| |||||||||| |  |  || ||||||||| |||||||||| ||||| |||||||||||||||| ||    
T  33283169 ccatttaatttgggaaaggttagttttatcccatcatgggaaaggtttttttgaccattagatcaaatgaggaacacatttttatcatactctctcatca 33283268  T
Q  134 ctaaatta 141  Q
    ||| ||||    
T  33283269 ctagatta 33283276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 168
Target Start/End: Original strand, 42518809 - 42518891
Alignment:
Q  87 tccattagattaaatgaggaatacattcttatcatactctctcaacactaaattatt-ttttacactatcttccaccctctct 168  Q
    |||||||||||||||||| || | ||||||||| |||| |||||||||||||||||| ||||| ||||| || ||||||||||    
T  42518809 tccattagattaaatgagaaacaaattcttatcgtactatctcaacactaaattattgttttatactatttttcaccctctct 42518891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 140
Target Start/End: Complemental strand, 16971082 - 16970971
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    |||||||||||||||||||||||   |||| ||||||| |||||||||||   |  |  |||||||||  ||||| ||||||| ||||||||||||| ||    
T  16971082 tggtgccatttaatttgggaaagactagttttttcccatcatgggaaagtaagttttaaccattagatctaatgaagaatacactcttatcatactccct 16970983  T
Q  129 caacactaaatt 140  Q
    ||||||| ||||    
T  16970982 caacactcaatt 16970971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 39950481 - 39950444
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttccca 66  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39950481 tggtgccatttaatttgggaaaggagagttctttccca 39950444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 13654933 - 13654981
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||| ||||||||||||||||||||| |||||||||||||| |||||||    
T  13654933 ggtgacatttaatttgggaaaggagacttctttcccaccataggaaagt 13654981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 686702 - 686667
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  686702 tggtgccatttaatttgggaaaggagagttctttcc 686667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 3958160 - 3958090
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||| ||| |||||||||||||||||||||| || || |||||||||||||    
T  3958160 attagattaagtgaagaacatatttttaacatactctctcaacactaaatttttcttcacactatcttcca 3958090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 4608639 - 4608589
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    |||||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  4608639 tggtgccatttaatctgggaaaggaatgttatttcccaccatgggaaagtt 4608589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 33685775 - 33685824
Alignment:
Q  60 tttcccaccatgggaaagttgatcatgtccattagattaaatgaggaata 109  Q
    ||||||||||||  ||||||||| |||||||||||||||||||| |||||    
T  33685775 tttcccaccatgtaaaagttgattatgtccattagattaaatgaagaata 33685824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 39167483 - 39167442
Alignment:
Q  35 catttaatttgggaaaggagagttctttcccaccatgggaaa 76  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  39167483 catttaatttgggaaaggagacttctttcccatcatgggaaa 39167442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 26688166 - 26688214
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||||||||||||||||||| | | |||||||||| |||||||||||    
T  26688166 ggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 26688214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 26957897 - 26957945
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||||||||||||||||||| | | |||||||||| |||||||||||    
T  26957897 ggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 26957945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 2319266 - 2319313
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 77  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  2319266 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 2319313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 4607470 - 4607513
Alignment:
Q  36 atttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    |||||||||||||||| ||| || ||||||||||||||||||||    
T  4607470 atttaatttgggaaagtagacttttttcccaccatgggaaagtt 4607513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 15183779 - 15183814
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||||||||| ||||||||||||||||||||||||    
T  15183779 tggtgccatttgatttgggaaaggagagttctttcc 15183814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 3739060 - 3739130
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| |||  |||| ||||||| |||||||||||||||||| ||| || || ||| |||||||||    
T  3739060 attagattaagtgaaaaatatattcttaacatactctctcaacactagatttttcttcacaatatcttcca 3739130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 4789534 - 4789592
Alignment:
Q  44 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatg 102  Q
    ||||||||| ||||| ||||||||||||||||||||  || || ||||||||| |||||    
T  4789534 tgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagatcaaatg 4789592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 28075995 - 28075925
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| |||  |||| ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  28075995 attagattaagtgaaaaatatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 28075925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 42408591 - 42408521
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  42408591 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 42408521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 7625472 - 7625521
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    ||||| ||||||||||||||||| | | |||||||||| |||||||||||    
T  7625472 tggtgtcatttaatttgggaaagcaaacttctttcccatcatgggaaagt 7625521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 13655709 - 13655660
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    ||||| |||||||||||||||| |||| ||||||||||  ||||||||||    
T  13655709 tggtggcatttaatttgggaaaagagacttctttcccattatgggaaagt 13655660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 14553666 - 14553715
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    ||||||||||||||||||||||| | | |||||| ||| |||||||||||    
T  14553666 tggtgccatttaatttgggaaagcaaacttcttttccatcatgggaaagt 14553715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 38064891 - 38064835
Alignment:
Q  88 ccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattt 144  Q
    |||||||||||| ||| || |||| ||||||||||| ||| |||||||| |||||||    
T  38064891 ccattagattaattgaagagtacaatcttatcatacactcccaacactatattattt 38064835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 30 - 185
Target Start/End: Complemental strand, 39523319 - 39523164
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  39523319 ggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagttgatcatgtccattagattaaatgaggaatacatctttaccatactctctc 39523220  T
Q  130 aacactaaattattttttacactatcttccaccctctctctttcatgttctcacac 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39523219 aacactaaattattttttacactatcttccaccctctctctttcatgttctcacac 39523164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 11417687 - 11417836
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  11417687 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 11417786  T
Q  130 aa-cactaaattat-tttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| ||||| |||||| |||||||| ||| |||||||||||||||    
T  11417787 aaccactagattatatttttatactatctttcacactctctctttcatgt 11417836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 38143787 - 38143628
Alignment:
Q  28 ttggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctc 127  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||| ||||||||||||    
T  38143787 ttggtaccatttaatttgggaaatgagagttctttcccaccatgggaaagttggtcatgtccattagattaaatgaggaacatattcctatcatactctc 38143688  T
Q  128 tcaa-cactaaatta-ttttttacactatcttccaccctctctctttcatgttctcacac 185  Q
    |||| ||||| |||| ||||||| |||||||| ||| ||||||||||||||| |||||||    
T  38143687 tcaaccactagattatttttttatactatctttcacactctctctttcatgtcctcacac 38143628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 29 - 177
Target Start/End: Original strand, 10424122 - 10424272
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||  |||||||||||||    
T  10424122 tggtgccatttaatttgggaaaggagagttctttcccaccataggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctct 10424221  T
Q  129 caa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    ||| ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  10424222 caaccactagattatttttttatactatctttcacactctctctttcatgt 10424272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 10425107 - 10424958
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||    
T  10425107 ggtgccatttaatttaggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggaatatattcctatcatactctctc 10425008  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| | |||||| ||| |||||||||||||||    
T  10425007 aaccactagattatttttttatattatctttcacactctctctttcatgt 10424958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 21166423 - 21166274
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  21166423 ggtgccatttaatttgagaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 21166324  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  21166323 aaccactagattatttttttatactatctttcacactctctctttcatgt 21166274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 29651380 - 29651231
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| | |||| ||||||||||||||    
T  29651380 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatctattagattaaatgaggaacatattcctatcatactctctc 29651281  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  29651280 aaccactagattatttttttatactatctttcacactctctctttcatgt 29651231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 177
Target Start/End: Complemental strand, 36865766 - 36865616
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| |||||||||||||    
T  36865766 tggtgacatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctct 36865667  T
Q  129 caa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    ||| ||||| |||| ||||||| ||||||||  || |||||||||||||||    
T  36865666 caaccactagattatttttttatactatcttttacactctctctttcatgt 36865616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 26611331 - 26611182
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  26611331 ggtgtcatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 26611232  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| ||||||||  || |||||||||||||||    
T  26611231 aaccactagattatttttttatactatcttttacactctctctttcatgt 26611182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 177
Target Start/End: Complemental strand, 38695004 - 38694850
Alignment:
Q  28 ttggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctc 127  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| | |||| ||||||||||||    
T  38695004 ttggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagttgatcatgtctattagattaaatgaggaaaatattcatatcatactctc 38694905  T
Q  128 tcaac-actaaattatttttt---ac-actatcttccaccctctctctttcatgt 177  Q
    ||||| |||| ||||||||||   || |||||||| ||| |||||||||||||||    
T  38694904 tcaaccactagattatttttttatactactatctttcacactctctctttcatgt 38694850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 11417985 - 11417867
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  11417985 ggtgtcatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 11417886  T
Q  130 aa-cactaaattatttttt 147  Q
    || ||||| ||||||||||    
T  11417885 aaccactagattatttttt 11417867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 35 - 177
Target Start/End: Original strand, 26610350 - 26610495
Alignment:
Q  35 catttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaa-ca 133  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||| |||||||||||||||| ||    
T  26610350 catttaatttgggaaatgagagttctttcccaccatgggaaaattgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaacca 26610449  T
Q  134 ctaaatta--ttttttacactatcttccaccctctctctttcatgt 177  Q
    ||| ||||  ||||||| |||||||| ||| |||||||||||||||    
T  26610450 ctagattattttttttatactatctttcacactctctctttcatgt 26610495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 45230365 - 45230514
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||| | |||| ||||||||||||||    
T  45230365 ggtgccatttaattcgggaaaagagagttctttcccaccatgggaaagttgatcatattcattagattaaatgaggaacatattcctatcatactctctc 45230464  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  45230465 aaccactagattatttttttatactatctttcacactctctctttcatgt 45230514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 45236008 - 45235859
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||  ||||||| ||||||    
T  45236008 ggtgccatttaatttggaaaaggagagttctttcccaccatgggaaagttaatcatgtccattagattaaatgaggaacatatttctatcatattctctc 45235909  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  45235908 aaccactagattatttttttatactatctttcacactctctctttcatgt 45235859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 31836508 - 31836390
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||  ||||||||||||||    
T  31836508 ggtgccatttaatttgagaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctc 31836409  T
Q  130 aa-cactaaattatttttt 147  Q
    || ||||| ||||||||||    
T  31836408 aaccactagattatttttt 31836390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 21165444 - 21165596
Alignment:
Q  27 gttggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactct 126  Q
    ||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||| |||||||||||||| | |||  |||||||||||    
T  21165444 gttggtgccatttaatttgggaaagaatagttctttcccaccatgagaaagttgatcatgtccatttgattaaatgaggaacatatttctatcatactct 21165543  T
Q  127 ctcaa-cactaaatt-attttttacactatcttccaccctctctctttcatgt 177  Q
    ||||| ||||| ||| |||||||| |||||||| |||  ||||||||||||||    
T  21165544 ctcaaccactagattaattttttatactatctttcacagtctctctttcatgt 21165596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 177
Target Start/End: Original strand, 29650416 - 29650564
Alignment:
Q  31 gtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctca 130  Q
    |||||||||||||||||||| ||||||||||| ||| | |||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||    
T  29650416 gtgccatttaatttgggaaatgagagttcttttccatcttgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctca 29650515  T
Q  131 a-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    | ||||| |||| ||||||| |||||||| ||| |||||| ||||||||    
T  29650516 accactagattatttttttatactatctttcacactctctttttcatgt 29650564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 9939419 - 9939301
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  9939419 ggtgccatttaatttgagaaaggggagttctttcccaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 9939320  T
Q  130 aa-cactaaattatttttt 147  Q
    || ||||| ||||||||||    
T  9939319 aaccactatattatttttt 9939301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 29 - 177
Target Start/End: Original strand, 31835147 - 31835297
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    |||||||||||||||||  |||| | |||||||||||||||| ||||||||||| ||||||||||||||||| |||||| | |||| |||||||||||||    
T  31835147 tggtgccatttaatttgaaaaagtatagttctttcccaccataggaaagttgattatgtccattagattaaacgaggaacatattcctatcatactctct 31835246  T
Q  129 caa-cactaaattat-tttttacactatcttccaccctctctctttcatgt 177  Q
    ||| ||||| ||||| |||||| |||||||| ||| |||||||||||||||    
T  31835247 caaccactagattatctttttatactatctttcacactctctctttcatgt 31835297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 147
Target Start/End: Original strand, 36864818 - 36864935
Alignment:
Q  31 gtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctca 130  Q
    |||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| || | |||| |||||||||||||||    
T  36864818 gtgctatttaatttgggaaaggagagttctttctcaccatgagaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctctca 36864917  T
Q  131 a-cactaaattatttttt 147  Q
    | ||||| ||||||||||    
T  36864918 accactagattatttttt 36864935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 39522375 - 39522524
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||| ||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||    
T  39522375 ggtgtcatttaatttgggaaaggatagttctttttcaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctctc 39522474  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| | | ||| |||||||||||    
T  39522475 aaccactagattatttttttatactatctttcgcactccctctttcatgt 39522524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 38694701 - 38694820
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||| | ||||||||||||||||||| | |||| |||||||||||||    
T  38694701 tggtgccatttaatttggaaaaggagagttctttcccagcatggaaaagttgatcatattcattagattaaatgaggaacatattcctatcatactctct 38694800  T
Q  129 caa-cactaaattatttttt 147  Q
    ||| ||||| ||||||||||    
T  38694801 caaccactagattatttttt 38694820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 36451461 - 36451327
Alignment:
Q  44 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattatt 143  Q
    ||||||||  ||||| |||| |||||||| ||||||||| ||||||||||||||||||||  || | || |||||| |||||||||||||||| ||||||    
T  36451461 tgggaaagaggagttgtttctcaccatggaaaagttgattatgtccattagattaaatgaaaaacaaatccttatcctactctctcaacactagattatt 36451362  T
Q  144 -ttttacactatcttccaccctctctctttcatgt 177  Q
     ||||||||||||||||||| ||||||||||||||    
T  36451361 gttttacactatcttccaccatctctctttcatgt 36451327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 175
Target Start/End: Original strand, 9939125 - 9939269
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||| ||||||||||||||||| ||||||||||    | |||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||    
T  9939125 ggtgtcatttaatttgggaaagtagagttcttt---tctatgggaaagttgatcatgtccattagattaaatgagaaacatattcttatcatactctctc 9939221  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcat 175  Q
    || ||||| |||| ||||||| |||||||| |||  ||||||||||||    
T  9939222 aaccactagattatttttttatactatctttcacattctctctttcat 9939269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 25970120 - 25970250
Alignment:
Q  44 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattatt 143  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||| || | ||  ||||||||||||||   ||||| ||||||    
T  25970120 tgggaaaggggagttgtttcccaccatgggaaagttgat-atgtccattagattaaatgagaaacaaatctttatcatactctct---cactagattatt 25970215  T
Q  144 -ttttacactatcttccaccctctctctttcatgt 177  Q
     ||||||||||||||||||| ||||||||||||||    
T  25970216 gttttacactatcttccaccatctctctttcatgt 25970250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 38143506 - 38143606
Alignment:
Q  48 aaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaa-cactaaattattttt 146  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||| ||||| |||||||||    
T  38143506 aaaggagagttcttttccaccataggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattattttt 38143605  T
Q  147 t 147  Q
    |    
T  38143606 t 38143606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 11806129 - 11806244
Alignment:
Q  68 catgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttccaccctctc 167  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||  |||||||||||| |||  | ||  |||||    
T  11806129 catgggaaagttaatcatgtccattagattaaatgaggaacacatttttatcctactctctcaacactagtttattttttacattattattca--ctctc 11806226  T
Q  168 tctttcatgttctcacac 185  Q
    ||||||||||||||||||    
T  11806227 tctttcatgttctcacac 11806244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 17648158 - 17648044
Alignment:
Q  64 ccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattatt-ttttacactatcttccacc 162  Q
    |||| ||| |||||||||| || ||||||||||||||| || |||| ||||||||| |||||||||||||||| |||||| ||||||||||||||||| |    
T  17648158 ccactatgtgaaagttgattatatccattagattaaataagaaataaattcttatcttactctctcaacactatattattgttttacactatcttccatc 17648059  T
Q  163 ctctctctttcatgt 177  Q
    |||||||||||||||    
T  17648058 ctctctctttcatgt 17648044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 23383327 - 23383457
Alignment:
Q  47 gaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttt 146  Q
    |||||||||||| |||||||||||||||||||| ||  | |||||| ||| |||||| ||| ||| |||||||||||||  |||| |||| |||| ||||    
T  23383327 gaaaggagagttgtttcccaccatgggaaagttaattttatccattcgatcaaatgaagaacacactcttatcatactccatcaatactagattaatttt 23383426  T
Q  147 tacactatcttccaccctctctctttcatgt 177  Q
    ||||||||||||||||||||||||| |||||    
T  23383427 tacactatcttccaccctctctcttccatgt 23383457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 36450742 - 36450871
Alignment:
Q  44 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctca-acactaaattat 142  Q
    ||||||||| ||||| ||| ||||||||||||||||||| ||||||||| ||||||||||| || | ||  ||||| |||||||||| |||||| ||| |    
T  36450742 tgggaaaggggagttgttttccaccatgggaaagttgattatgtccattggattaaatgagtaacaaatctttatcctactctctcatacactagattgt 36450841  T
Q  143 t-ttttacactatcttccaccctctctctt 171  Q
    | ||||||||||||||||||| ||||||||    
T  36450842 tgttttacactatcttccaccatctctctt 36450871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 178
Target Start/End: Complemental strand, 25970851 - 25970701
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||| |||||| | ||||||| | ||||| |||||||||||| |||||||||| |||||||||  |||||||||| || | ||  ||||| |||||||||    
T  25970851 ggtggcatttagtatgggaaaagggagttgtttcccaccatgagaaagttgattatgtccattgaattaaatgagtaacaaatctttatcctactctctc 25970752  T
Q  130 a-acactaaattatt-ttttacactatcttccaccctctctctttcatgtt 178  Q
    | |||||| ||| || ||||||||||||||||||| |||||||||| ||||    
T  25970751 atacactagattgttgttttacactatcttccaccatctctctttcttgtt 25970701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 30808620 - 30808713
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcata 122  Q
    ||||| |||||||  ||||||||||||||| |||||||||||||||||||| |   || |||||||||||| | | ||||||||||||||||||    
T  30808620 tggtggcatttaaaatgggaaaggagagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaatacattcttatcata 30808713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 39522655 - 39522605
Alignment:
Q  190 tttgtttgatccttgaaaatggtacgttaacaagttttccggcagcaacca 240  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  39522655 tttgtttgatccttgaaaatggtacgctaacaagtttttcggcagcaacca 39522605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 47377646 - 47377597
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  47377646 ggtgccatttaatttgggaaaggggagttgtttcccaccatgggaaagtt 47377597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 47198605 - 47198653
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  47198605 ggtgacatttaatttgggaaaggagacttctttcccaccatgggaaagt 47198653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 3848621 - 3848578
Alignment:
Q  35 catttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  3848621 catttaatttgggaaaggagacttctttcccaccatgggaaagt 3848578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 146
Target Start/End: Complemental strand, 35428177 - 35428091
Alignment:
Q  60 tttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttt 146  Q
    |||||||| |||||||||||| ||||| |||| ||||  ||| | ||| ||||| ||||||| ||| ||||||||||||||||||||    
T  35428177 tttcccactatgggaaagttgttcatgaccatcagatctaattaagaacacatttttatcatgctccctcaacactaaattattttt 35428091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 25371594 - 25371545
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| ||||||    
T  25371594 tggtgacatttaatttgggaaaggagacttctttcccaccatgagaaagt 25371545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 37275088 - 37275137
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    |||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  37275088 ggtgccgtttaatttgggaaaggagacttctttcccaccatgagaaagtt 37275137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 47376852 - 47376905
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatc 83  Q
    |||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  47376852 ggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaagttgatc 47376905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 158
Target Start/End: Original strand, 5825392 - 5825459
Alignment:
Q  88 ccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttc 158  Q
    ||||||||| |||||||||| ||||| ||||| ||||||||||||||||    ||||||||||||||||||    
T  5825392 ccattagatcaaatgaggaacacattattatcctactctctcaacacta---gattttttacactatcttc 5825459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 38014970 - 38014870
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||| ||||||||||||||||  |||| || ||||||||||||||| |  |  || || |||||| |||||||||| ||||| | |||||||||||||    
T  38014970 ggtgccgtttaatttgggaaaggctagtttttccccaccatgggaaaggtttttttgaccgttagatcaaatgaggaacacattttaatcatactctctc 38014871  T
Q  130 a 130  Q
    |    
T  38014870 a 38014870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 3847891 - 3847934
Alignment:
Q  35 catttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  3847891 catttaatttgggaaaggagacttttttcccaccatgggaaagt 3847934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 10424420 - 10424385
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  10424420 tggtgccatttaatttgggaaaggagagttctttcc 10424385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 21166136 - 21166171
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  21166136 tggtgccatttaatttgggaaaggagagttctttcc 21166171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 29650690 - 29650655
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  29650690 tggtgccatttaatttgggaaaggagagttctttcc 29650655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 31836220 - 31836255
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  31836220 tggtgccatttaatttgggaaaggagagttctttcc 31836255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 45235732 - 45235767
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  45235732 tggtgccatttaatttgggaaaggagagttctttcc 45235767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 45330579 - 45330669
Alignment:
Q  44 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacac 134  Q
    ||||||||| ||||| ||||||||||||| |||||| |   || ||| |||||||| | | ||||||||||||||||||  ||||||||||    
T  45330579 tgggaaaggggagttgtttcccaccatggaaaagttaaatttgaccactagattaagtaatgaatacattcttatcatagactctcaacac 45330669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 55159186 - 55159228
Alignment:
Q  36 atttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  55159186 atttaatttgggaaaggagacttctttcctaccatgggaaagt 55159228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 12589345 - 12589393
Alignment:
Q  88 ccattagattaaatgaggaatacattcttatcatactctctcaacacta 136  Q
    |||||||||||||||| |||||||||| |||||||||| ||||| ||||    
T  12589345 ccattagattaaatgaagaatacattcatatcatactccctcaatacta 12589393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 30478309 - 30478357
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||||||||||||||||||| | | |||||||||| |||||||||||    
T  30478309 ggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 30478357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 42544488 - 42544536
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||||||||||||||||||| ||| || ||||||||||||| |||||    
T  42544488 ggtgccatttaatttgggaaagaagacttttttcccaccatggaaaagt 42544536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 47199443 - 47199395
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||| |||||||||||||||| |||| |||||||||||||| |||||||    
T  47199443 ggtggcatttaatttgggaaaagagacttctttcccaccataggaaagt 47199395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 48013317 - 48013365
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||||||||||||||||||| | | |||||||||| |||||||||||    
T  48013317 ggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 48013365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 26611055 - 26611090
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    |||||||||||||||||||||| |||||||||||||    
T  26611055 tggtgccatttaatttgggaaatgagagttctttcc 26611090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 199059 - 199129
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  199059 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 199129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 79
Target Start/End: Original strand, 11680283 - 11680325
Alignment:
Q  37 tttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    ||||||||||||||||  |||| ||||||||||||||||||||    
T  11680283 tttaatttgggaaaggttagttttttcccaccatgggaaagtt 11680325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 79
Target Start/End: Original strand, 11688562 - 11688604
Alignment:
Q  37 tttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    ||||||||||||||||  |||| ||||||||||||||||||||    
T  11688562 tttaatttgggaaaggttagttttttcccaccatgggaaagtt 11688604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 20075585 - 20075655
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  20075585 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 20075655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 25370511 - 25370553
Alignment:
Q  35 catttaatttgggaaaggagagttctttcccaccatgggaaag 77  Q
    ||||||||||||||||||  |||| ||||||||||||||||||    
T  25370511 catttaatttgggaaaggctagttttttcccaccatgggaaag 25370553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 31876848 - 31876918
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  31876848 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 31876918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 46765216 - 46765110
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||| |||||||||||||||||   |||| ||||||||||||||||||    |     |||||||||||||||| ||||||| || |||||||||| |||    
T  46765216 ggtggcatttaatttgggaaagactagttttttcccaccatgggaaagcaagtttcaaccattagattaaatgaagaatacagtcatatcatactccctc 46765117  T
Q  130 aacacta 136  Q
    || ||||    
T  46765116 aatacta 46765110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 48781542 - 48781612
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||||| ||||||| ||| || | ||||||||||||| || || |||||||||||||    
T  48781542 attagattaagtgatgaatatattcttaacatgctttttcaacactaaatttttcttcacactatcttcca 48781612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 52597737 - 52597667
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  52597737 attagattaagtgaagaacatattcttaccatgctctctcaacactagatttttcttcacactatcttcca 52597667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 55815885 - 55815955
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||||||| |||||| ||||||| ||| || || |||||||||||||    
T  55815885 attagattaagtgaagaacatattcttatcatgctctcttaacactagatttttcttcacactatcttcca 55815955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 23425255 - 23425206
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    |||| |||||| | |||||| |||||||| ||||||||||||||||||||    
T  23425255 ggtggcatttagtatgggaatggagagttgtttcccaccatgggaaagtt 23425206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 28684280 - 28684231
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    |||| ||||||||||||||||||||| || ||||| ||||| ||||||||    
T  28684280 ggtgacatttaatttgggaaaggagacttttttcctaccataggaaagtt 28684231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 52758757 - 52758648
Alignment:
Q  31 gtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt-gatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||| |  |||| |||| || |||||||||||| | |  || ||||||||||||||  |||| ||| | ||| |||| ||||||    
T  52758757 gtgccatttaatttgggaaatgctagttttttctcatcatgggaaagttagtttttggccattagattaaatagggaacacaattttaccatagtctctc 52758658  T
Q  130 aacactaaat 139  Q
    |||| |||||    
T  52758657 aacattaaat 52758648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 160
Target Start/End: Complemental strand, 20822754 - 20822706
Alignment:
Q  113 tcttatcatactctctc-aacactaaattattttttacactatcttcca 160  Q
    ||||||| ||||||||  ||||||| |||||||||||||||||||||||    
T  20822754 tcttatcgtactctctttaacactatattattttttacactatcttcca 20822706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 23865365 - 23865321
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatggga 74  Q
    |||||| ||||||||| ||||||||| || |||||||||||||||    
T  23865365 ggtgccgtttaatttgtgaaaggagacttgtttcccaccatggga 23865321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 45331501 - 45331409
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcata 122  Q
    |||| |||||||  || |||||| ||||| |||||||||||| ||||||| |   || |||||||||||| | | ||| ||||||||||||||    
T  45331501 ggtggcatttaaaatgagaaaggggagttgtttcccaccatgagaaagttaaatttgaccattagattaagtaatgaacacattcttatcata 45331409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 51412637 - 51412724
Alignment:
Q  71 gggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcc 159  Q
    ||||||||||||  |  ||||| |||||||| ||||  ||| |||||||||  |||||||||||| |||| ||||| ||||||||||||    
T  51412637 gggaaagttgattttagccatttgattaaataaggagcacactcttatcatgttctctcaacactgaatt-tttttcacactatcttcc 51412724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 52757813 - 52757861
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||||||||||||||||||| ||| || |||||| |||| |||||||    
T  52757813 ggtgccatttaatttgggaaagaagacttttttccctccataggaaagt 52757861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 53535903 - 53535835
Alignment:
Q  74 aaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattat 142  Q
    ||||||||| || |||||||||||||||||  |||| ||| ||||| ||||| || ||||||| |||||    
T  53535903 aaagttgattatatccattagattaaatgaaaaatatattgttatcttactcacttaacactagattat 53535835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 55160114 - 55160067
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||||||    
T  55160114 ggtggcatttaatttgggaaaggagactt-tttctcaccatgggaaagt 55160067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 4e-56; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 29 - 185
Target Start/End: Complemental strand, 33480677 - 33480519
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||    
T  33480677 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 33480578  T
Q  129 caa-cactaaatta-ttttttacactatcttccaccctctctctttcatgttctcacac 185  Q
    ||| ||||| |||| ||||||| |||||||| ||| ||||||||||||||||| |||||    
T  33480577 caaccactagattatttttttatactatctttcacactctctctttcatgttcccacac 33480519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 22579933 - 22580084
Alignment:
Q  28 ttggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctc 127  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||    
T  22579933 ttggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctc 22580032  T
Q  128 tcaa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    |||| ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  22580033 tcaatcactagattatttttttatactatctttcacactctctctttcatgt 22580084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 177
Target Start/End: Original strand, 3542816 - 3542963
Alignment:
Q  32 tgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaa 131  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||    
T  3542816 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaacatattcctatcatactctctcaa 3542915  T
Q  132 -cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
     ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  3542916 ccactagattatttttttaaactatctttcacactctctctttcatgt 3542963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 28 - 177
Target Start/End: Complemental strand, 15083368 - 15083217
Alignment:
Q  28 ttggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctc 127  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||| | |||| ||||||||||||    
T  15083368 ttggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagttgatcatatctattagattaaatgaggaacatattcctatcatactctc 15083269  T
Q  128 tcaa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    |||| ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  15083268 tcaaccactagattatttttttatactatctttcacactctctctttcatgt 15083217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 33018167 - 33018316
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||    
T  33018167 ggtgccatttaatttgggaaaggagagttctttcccatcattggaaagttgatcatgtccattagattaaatgaggaacatatttttatcatactctctc 33018266  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || || || |||| ||||||| |||||||| ||| |||||||||||||||    
T  33018267 aaccattagattatttttttatactatctttcacactctctctttcatgt 33018316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 3543111 - 3542993
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  3543111 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 3543012  T
Q  130 aa-cactaaattatttttt 147  Q
    || ||||| ||||||||||    
T  3543011 aaccactagattatttttt 3542993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 7193338 - 7193440
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||    
T  7193338 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatctccattagattaaatgaggaacatattcttatcatactctctc 7193437  T
Q  130 aac 132  Q
    |||    
T  7193438 aac 7193440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 33479693 - 33479846
Alignment:
Q  27 gttggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactct 126  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||  |||||||||||    
T  33479693 gttgatgccatttaatttgggaaaggagagttatttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactct 33479792  T
Q  127 ctcaa-cactaaatta--ttttttacactatcttccaccctctctctttcatgt 177  Q
    ||||| ||||| ||||  ||||||| |||||||| ||| |||||| ||||||||    
T  33479793 ctcaaccactagattattttttttatactatctttcacactctctatttcatgt 33479846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 35 - 177
Target Start/End: Original strand, 15082402 - 15082546
Alignment:
Q  35 catttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaa-ca 133  Q
    |||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||| ||    
T  15082402 catttaatttgggaaatgagagttcttttccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaacca 15082501  T
Q  134 ctaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    ||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  15082502 ctagattatttttttatactatctttcacactctctctttcatgt 15082546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 22587354 - 22587213
Alignment:
Q  34 ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaa-c 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||  ||| |||||| ||||| |    
T  22587354 ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctattatactcactcaatc 22587255  T
Q  133 actaaatta-ttttttacactatcttccaccctctctctttc 173  Q
    |||| |||| ||||||| |||||||| ||| |||||||||||    
T  22587254 actagattatttttttatactatctttcacactctctctttc 22587213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 37 - 147
Target Start/End: Complemental strand, 33018457 - 33018346
Alignment:
Q  37 tttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaa-cact 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||| ||||    
T  33018457 tttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaaccact 33018358  T
Q  136 aaattatttttt 147  Q
    | ||||||||||    
T  33018357 agattatttttt 33018346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 7193626 - 7193508
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||| ||||| |||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||| |||  ||||||||||||||    
T  7193626 ggtgccatttaatttgagaaagtagagttcttttccatcatgggaaagttgatcatatccattagattaaatgaggaatatatttctatcatactctctc 7193527  T
Q  130 aa-cactaaattatttttt 147  Q
    || ||||| ||||||||||    
T  7193526 aaccactagattatttttt 7193508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 22582523 - 22582450
Alignment:
Q  34 ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22582523 ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaa 22582450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 7531827 - 7531877
Alignment:
Q  28 ttggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||| ||||||||||||||||||||| |||||||| |||||||||||||    
T  7531827 ttggtggcatttaatttgggaaaggagacttctttcctaccatgggaaagt 7531877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 24126767 - 24126713
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatc 83  Q
    ||||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  24126767 tggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaagttgatc 24126713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 24125972 - 24126021
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||||||    
T  24125972 ggtggcatttaatttgggaaaggggagttgtttcccaccatgggaaagtt 24126021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 15082673 - 15082638
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  15082673 tggtgccatttaatttgggaaaggagagttctttcc 15082638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 22580596 - 22580631
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  22580596 tggtgccatttaatttgggaaaggagagttctttcc 22580631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 22587082 - 22587117
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  22587082 tggtgccatttaatttgggaaaggagagttctttcc 22587117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 33479973 - 33479938
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  33479973 tggtgccatttaatttgggaaaggagagttctttcc 33479938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 25067884 - 25067794
Alignment:
Q  44 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacac 134  Q
    |||||||||| | || ||||||||||| ||||||||| |  |||||||| ||| |||| || |||||| |||||| ||| |||||||||||    
T  25067884 tgggaaaggatatttgtttcccaccataggaaagttgtttttgtccattggatcaaataagaaatacaatcttattatagtctctcaacac 25067794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 141
Target Start/End: Original strand, 29290144 - 29290234
Alignment:
Q  51 ggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaatta 141  Q
    |||||||| |||||||||||||||||||| ||  |  ||||  |||||||| | ||||||| |||||||||||||  ||||||||| ||||    
T  29290144 ggagagttgtttcccaccatgggaaagttaatgttaaccatgggattaaataaagaatacactcttatcatactccttcaacactagatta 29290234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 7532488 - 7532440
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||| ||||||||||||||||||||| ||||||  ||||||||||||||    
T  7532488 ggtggcatttaatttgggaaaggagacttctttttcaccatgggaaagt 7532440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 9574619 - 9574571
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||| ||||||| ||||||||||||| |||||||||||||| |||||||    
T  9574619 ggtggcatttaacttgggaaaggagacttctttcccaccataggaaagt 9574571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 14337605 - 14337557
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||||||||||||||||||| | | |||||||||| |||||||||||    
T  14337605 ggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 14337557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 1035451 - 1035341
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||| |||||  | || ||||||| |||||||||| |  |  || || |||||| ||||||| || ||||| | |||||||||||||    
T  1035451 ggtgccatttaatttggaaaaggttaattttttcccatcatgggaaagatttttttgaccgttagatcaaatgagaaacacattttaatcatactctctc 1035352  T
Q  130 aacactaaatt 140  Q
    |  ||||||||    
T  1035351 attactaaatt 1035341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 6032779 - 6032709
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  6032779 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 6032709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 13944350 - 13944420
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||||||| ||| | ||||||| |||  ||||||||||||| ||| || || |||||||||||||    
T  13944350 attagattaaatgaagaacatattcttaacatgatctctcaacactagatttttcttcacactatcttcca 13944420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 26227450 - 26227408
Alignment:
Q  36 atttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    ||||||||||||||| |||| |||||| |||||||||||||||    
T  26227450 atttaatttgggaaatgagacttcttttccaccatgggaaagt 26227408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 30610771 - 30610841
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  30610771 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttgacactatcttcca 30610841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 30611371 - 30611301
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  30611371 attagattaactgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 30611301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 7158435 - 7158483
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||||||||||||||||||| | | ||| |||||| |||||||||||    
T  7158435 ggtgccatttaatttgggaaagcaaacttcattcccatcatgggaaagt 7158483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 7159389 - 7159341
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||||||||||||||||||| | | || ||||||| |||||||||||    
T  7159389 ggtgccatttaatttgggaaagcaaacttttttcccatcatgggaaagt 7159341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 4e-56; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 6075988 - 6076127
Alignment:
Q  44 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattatt 143  Q
    ||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  6075988 tgggaaaggagagttcttttctaccatgagaaagttgatcatgtccattagattaaatgaggaatacatttttatcatagtctctcaacactaaattatt 6076087  T
Q  144 ttttacactatcttccaccctctctctttcatgttctcacac 185  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  6076088 ttttacactatcttcca--ctctctctttcatgttctcacac 6076127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 193850 - 193997
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||| | |||||||||||||||||||    
T  193850 ggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagttaatcatgtccattaaattaaatgaggaacatattcttatcatactctctc 193949  T
Q  130 aacactaaattattttttacactatcttccaccctctctctttcatgt 177  Q
     |||||| ||||||||||| | |||||| || | ||||||||||||||    
T  193950 cacactagattattttttatattatctttcatcatctctctttcatgt 193997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 16270207 - 16270357
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  16270207 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 16270306  T
Q  130 aa-cactaaatta--ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| ||||  ||||||| |||||||| ||| ||| |||||||||||    
T  16270307 aaccactagattattttttttatactatctttcacactccctctttcatgt 16270357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 23440913 - 23440795
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  23440913 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatattcctatcatactctctc 23440814  T
Q  130 aa-cactaaattatttttt 147  Q
    || ||||| ||||||||||    
T  23440813 aaccactagattatttttt 23440795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 29 - 177
Target Start/End: Original strand, 43737728 - 43737878
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  43737728 tggtgccatttaatttgggaaagtagagttatttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatatttttatcatactctct 43737827  T
Q  129 caa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    ||| ||||| |||| |||||||||||||||| |||  ||||||||| ||||    
T  43737828 caaccactagattatttttttacactatctttcacattctctctttgatgt 43737878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 30 - 175
Target Start/End: Complemental strand, 48972493 - 48972346
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || | |||| ||||||||||||||    
T  48972493 ggtgccatttaatttgggaaaggagagttctttcccaccatggaaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctctc 48972394  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcat 175  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||    
T  48972393 aaccactagattatttttttatactatctttcacactctctctttcat 48972346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 51974437 - 51974586
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| | |||| ||||||||||||||    
T  51974437 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtctattagattaaatgaagaacatattcctatcatactctctc 51974536  T
Q  130 aac-actaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    ||| |||| |||| ||||||| |||||||| |||  ||||||||||||||    
T  51974537 aactactagattatttttttatactatctttcacattctctctttcatgt 51974586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 9948935 - 9948807
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||| ||    
T  9948935 ggtgccatttaatttaggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctatc 9948836  T
Q  130 aa-cactaaattattttttacactatctt 157  Q
    || ||||| ||||||||||| ||||||||    
T  9948835 aaccactagattattttttatactatctt 9948807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 23440617 - 23440765
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||||||||||||||| || |||| ||||||||| ||||||||||||||||||||| || | |||| ||||||||||||||    
T  23440617 ggtgccatttaatttgggaaaggagagttctttccaactatggaaaagttgattatgtccattagattaaatgagaaacatattcctatcatactctctc 23440716  T
Q  130 aa-cactaaattattttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| ||||||||||| |||||||| ||| |||||||||||||||    
T  23440717 aaccactagattattttttatactatctttcacactctctctttcatgt 23440765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 29 - 177
Target Start/End: Complemental strand, 16271197 - 16271047
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    |||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||    
T  16271197 tggtgccatttaatttaggaaaggagagttctttctcatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 16271098  T
Q  129 caa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    ||| ||||| |||| ||||||| ||||| || ||| |||||||||||||||    
T  16271097 caaccactagattatttttttatactatatttcacactctctctttcatgt 16271047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 30 - 175
Target Start/End: Complemental strand, 50827138 - 50826992
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || | ||| |||||||||||||||    
T  50827138 ggtgccatttaatttgagaaaggagagtt-tttcccaccatgggaaagttgatcatgtccattagattaaatgagaaacatatttttatcatactctctc 50827040  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcat 175  Q
    || |||||||||| ||||||| | |||||| ||| |||||||||||||    
T  50827039 aaccactaaattatttttttatagtatctttcacactctctctttcat 50826992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 43738026 - 43737908
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||| ||||||| ||||||    
T  43738026 ggtgccatttaatttgggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatattctctc 43737927  T
Q  130 aa-cactaaattatttttt 147  Q
    || ||||| ||||||||||    
T  43737926 aaccactagattatttttt 43737908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 29 - 177
Target Start/End: Complemental strand, 51975276 - 51975126
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||| |||||||||||||||||| | |||| |||||||||||||    
T  51975276 tggtgccatttaatttgggaaaggagagttctttttcactatgggaaagttgatcatgtcaattagattaaatgaggaacatattcctatcatactctct 51975177  T
Q  129 caa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
     || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  51975176 taaccactagattatttttttatactatctttcacactctctctttcatgt 51975126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 9947995 - 9948144
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||| | |||||||||||||||||| |||||||||||| | ||||||||||||||||||| | |||| ||||||||||||||    
T  9947995 ggtgccatttaatttgggaaagaaaagttctttcccaccatggaaaagttgatcatattcattagattaaatgaggaacatattcctatcatactctctc 9948094  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  9948095 aaccactagattatttttttatactatctttcacactctctctttcatgt 9948144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 30 - 185
Target Start/End: Original strand, 48971705 - 48971862
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||| |  |||||||||||||||||| | |||| ||||||||||||||    
T  48971705 ggtgtcatttaatttgggaaaggagagttctttcccacaatgagaaagttgatcatataaattagattaaatgaggaacatattcctatcatactctctc 48971804  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgttctcacac 185  Q
    || ||||| |||| ||||||| |||||||| ||| ||||||||||||||||| |||||    
T  48971805 aaccactatattatttttttatactatctttcacactctctctttcatgttcccacac 48971862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 54 - 177
Target Start/End: Original strand, 12925897 - 12926020
Alignment:
Q  54 gagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacacta 153  Q
    ||||| ||| ||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||  ||||||||||||| || ||||||||||||||||    
T  12925897 gagtttttttccaccatagaaaagttgataatgtccattagattaaatgtggaatacattcttatactactctctcaacattagattattttttacacta 12925996  T
Q  154 tcttccaccctctctctttcatgt 177  Q
    ||||||||||||||||||||||||    
T  12925997 tcttccaccctctctctttcatgt 12926020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 38930310 - 38930469
Alignment:
Q  28 ttggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctc 127  Q
    |||||| ||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||||||| ||||||| ||||| | |||| ||||||||||||    
T  38930310 ttggtgtcatttaatttgggaaaggaaagttctttttcaccatgggaaagttgatcatatccattaaattaaataaggaacatattcctatcatactctc 38930409  T
Q  128 tcaa-cactaaatta-ttttttacactatcttccaccctctctctttcatgttctcacac 185  Q
    |||| ||||| |||| ||||||| |||||||| ||| ||||||||||||||||| |||||    
T  38930410 tcaaccactagattatttttttatactatctttcacactctctctttcatgttcccacac 38930469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 47334217 - 47334347
Alignment:
Q  48 aaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattatt-ttt 146  Q
    ||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||| || | || |||||| |||||||||||||||| |||||| |||    
T  47334217 aaaggggagttgtttcccacaatgggaaagttgattatgtccattagattaaatgagaaacaaatccttatcctactctctcaacactagattattgttt 47334316  T
Q  147 tacactatcttccaccctctctctttcatgt 177  Q
    |||||||||||||||| ||||||||||||||    
T  47334317 tacactatcttccaccatctctctttcatgt 47334347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 54 - 177
Target Start/End: Complemental strand, 31390847 - 31390726
Alignment:
Q  54 gagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacacta 153  Q
    ||||||||||||||||||||||||||||| ||||||||| || ||||||||||| ||||| ||||| ||||||||||||| || ||||||||||||||||    
T  31390847 gagttctttcccaccatgggaaagttgattatgtccattggaataaatgaggaacacatttttatcctactctctcaacattagattattttttacacta 31390748  T
Q  154 tcttccaccctctctctttcatgt 177  Q
    |||| ||  |||||||||||||||    
T  31390747 tctttca--ctctctctttcatgt 31390726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 6076901 - 6076767
Alignment:
Q  44 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaa-cactaaattat 142  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||| || | |||| |||||||||||||||| || || |||||    
T  6076901 tgggaaatgagagttctttcccactatggaaaagttgatcatgtccattatattaaatgagtaacatattcctatcatactctctcaaccaatagattat 6076802  T
Q  143 tttttacactatcttccaccctctctctttcatgt 177  Q
    |||||| |||||||| ||| |||||||||||||||    
T  6076801 tttttatactatctttcacactctctctttcatgt 6076767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 54 - 177
Target Start/End: Original strand, 20794313 - 20794436
Alignment:
Q  54 gagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacacta 153  Q
    ||||| ||| ||||||| ||||||||||| |||| |||||||||||||| |||| ||||||||||   |||||||||||| || ||||||||||||||||    
T  20794313 gagtttttttccaccataggaaagttgataatgtgcattagattaaatgtggaacacattcttatatcactctctcaacattagattattttttacacta 20794412  T
Q  154 tcttccaccctctctctttcatgt 177  Q
    | ||||||||||||||||||||||    
T  20794413 ttttccaccctctctctttcatgt 20794436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 65 - 177
Target Start/End: Original strand, 17050488 - 17050600
Alignment:
Q  65 caccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttccaccct 164  Q
    |||||||||||||||||| |||| |||||||||||||  || | ||||||||||  ||||||||||| | || |||||||||||||||||||||||||||    
T  17050488 caccatgggaaagttgataatgttcattagattaaatatggtacacattcttatactactctctcaatattagattattttttacactatcttccaccct 17050587  T
Q  165 ctctctttcatgt 177  Q
    |||||||||||||    
T  17050588 ctctctttcatgt 17050600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 177
Target Start/End: Complemental strand, 38931293 - 38931145
Alignment:
Q  32 tgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaa 131  Q
    |||||||||||||||||||| |||||||||| | |||||||||||||||||||| ||||||| ||||||| || || | |||  ||||||||||||||||    
T  38931293 tgccatttaatttgggaaagaagagttcttttctaccatgggaaagttgatcatatccattaaattaaataagaaacatatttctatcatactctctcaa 38931194  T
Q  132 -cactaaatta--ttttttacactatcttccaccctctctctttcatgt 177  Q
     ||||| ||||  ||||||| | |||||| ||| |||||||||||||||    
T  38931193 ccactatattattttttttatattatctttcacactctctctttcatgt 38931145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 178
Target Start/End: Complemental strand, 47334948 - 47334798
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||| |||||| | ||||||| | ||||| ||||||||||| ||||||||||| ||||||||| ||||||||||| || | ||  ||||| |||||||||    
T  47334948 ggtggcatttagtatgggaaaagggagttgtttcccaccataggaaagttgattatgtccattggattaaatgagtaacaaatctttatcctactctctc 47334849  T
Q  130 a-acactaaattatt-ttttacactatcttccaccctctctctttcatgtt 178  Q
    | |||||| ||  || ||||||||||||||||||| |||||||||| ||||    
T  47334848 atacactatatcgttgttttacactatcttccaccatctctctttcttgtt 47334798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 27888700 - 27888765
Alignment:
Q  59 ctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatact 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||    
T  27888700 ctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatact 27888765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 6076636 - 6076686
Alignment:
Q  190 tttgtttgatccttgaaaatggtacgttaacaagttttccggcagcaacca 240  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6076636 tttgtttgatccttgaaaatggtacattaacaagttttccggcagcaacca 6076686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 40649580 - 40649516
Alignment:
Q  65 caccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||| ||||||||||||||||||| |||| ||||||||||  |||||||||    
T  40649580 caccatgggaaagttgataatgtccattagattaaatgtggaacacattcttatactactctctc 40649516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 46133726 - 46133807
Alignment:
Q  63 cccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattt 144  Q
    ||||||||||||||||  || |||||||| ||||||||||||||  ||||||||||  ||||||||||||| || |||||||    
T  46133726 cccaccatgggaaagtgaattatgtccatcagattaaatgaggagcacattcttatactactctctcaacattagattattt 46133807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 51987827 - 51987875
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  51987827 ggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt 51987875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 194749 - 194610
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgagga--atacattcttatcatactctc 127  Q
    |||||||||||||||||||||| | | |||||||||| |||||||||||  |||    |||||||||| || |||||  ||  ||| |||||||||| ||    
T  194749 ggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagtaaatctcaaccattagattcaa-gaggaacattgatt-ttatcatactatc 194652  T
Q  128 tcaacactaaattattttttacactatcttccaccctctctc 169  Q
    || |||||| ||||||||||| |||||||| || ||||||||    
T  194651 tctacactagattattttttatactatctttcatcctctctc 194610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 1012547 - 1012596
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    |||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  1012547 ggtgccgtttaatttgggaaaggagatttttttcccaccatgggaaagtt 1012596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 8560838 - 8560887
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||||    
T  8560838 tggtgacatttaatttgggaaaggagacttctttcccatcatgggaaagt 8560887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 35616823 - 35616775
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  35616823 ggtggcatttaacttgggaaaggagacttctttcccaccatgggaaagt 35616775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 51988512 - 51988464
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||| ||||||||||||||||||||| |||||| |||||||||||||||    
T  51988512 ggtggcatttaatttgggaaaggagacttcttttccaccatgggaaagt 51988464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 16270900 - 16270935
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  16270900 tggtgccatttaatttgggaaaggagagttctttcc 16270935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 38930609 - 38930574
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  38930609 tggtgccatttaatttgggaaaggagagttctttcc 38930574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 7219068 - 7219138
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||||||| ||||| ||||||| ||| || ||||||||||| ||| || || |||||||||||||    
T  7219068 attagattaaatgaagaatatattcttaacatgctttctcaacactagatttttcttcacactatcttcca 7219138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 177
Target Start/End: Original strand, 27418221 - 27418311
Alignment:
Q  88 ccattagattaaatgaggaatacattcttatcatactctctc-aacactaaattattttttacactatcttccaccctctctctttcatgt 177  Q
    ||||||||| |||||| ||  ||| |||| | |||||||||| ||||||| |||||||| ||||||||||||||   ||||||||||||||    
T  27418221 ccattagatcaaatgaagagcacactcttgttatactctctcgaacactatattattttatacactatcttccataatctctctttcatgt 27418311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 151
Target Start/End: Original strand, 41465267 - 41465357
Alignment:
Q  61 ttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacac 151  Q
    ||||||||||||||||||| ||  || |  |||||| |||| |||||||||||||||| |||||||||  |||||| ||| | ||||||||    
T  41465267 ttcccaccatgggaaagtttattttgacatttagatcaaatcaggaatacattcttataatactctcttcacactagattttcttttacac 41465357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 51247888 - 51247958
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||||| ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  51247888 attagattaagtgaagaatatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 51247958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 51248509 - 51248439
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| |||||||||||||||||| ||| || || |||||||||||||    
T  51248509 attagattaagtgaagaacatattcttaacatactctctcaacactagatttttcttcacactatcttcca 51248439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 13536362 - 13536418
Alignment:
Q  111 attcttatcatactctctcaacactaaattattttttacactatcttccaccctctct 168  Q
    |||||||||||||||  |||| |||| |||||||||||||||||||||| ||||||||    
T  13536362 attcttatcatactccatcaatactatattattttttacactatcttcc-ccctctct 13536418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 37874063 - 37874112
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    ||||| ||||||| |||||||| |||| ||||||||||||||||||||||    
T  37874063 tggtgacatttaacttgggaaatgagacttctttcccaccatgggaaagt 37874112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 49611607 - 49611498
Alignment:
Q  31 gtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt-gatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||  |||| ||||||| ||||||||| || | |  || ||||||||||||||  |||| ||| | ||| |||  ||||||    
T  49611607 gtgccatttaatttgggaaaggctagttttttcccatcatgggaaaattagtttttggccattagattaaatagggaacacaattttaccatggtctctc 49611508  T
Q  130 aacactaaat 139  Q
    ||||||||||    
T  49611507 aacactaaat 49611498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 134
Target Start/End: Complemental strand, 11032267 - 11032163
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||| |||||||  ||||||||| || |  ||||||||||||||||||||||   || |||||||||||| | | ||| |||||||||||||   |||||    
T  11032267 ggtggcatttaacatgggaaaggggaatagtttcccaccatgggaaagttgaatttgaccattagattaagtaatgaacacattcttatcatggactctc 11032168  T
Q  130 aacac 134  Q
    |||||    
T  11032167 aacac 11032163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 158
Target Start/End: Complemental strand, 27420282 - 27420214
Alignment:
Q  88 ccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttc 158  Q
    ||||||||| |||||||||| ||||| | |||||||||||| ||||||| ||  ||||| |||||||||||    
T  27420282 ccattagatcaaatgaggaacacattttaatcatactctctaaacactagat--tttttcacactatcttc 27420214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 37725438 - 37725509
Alignment:
Q  89 cattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    ||||||||||| ||| ||| | ||||||| |||||||||||||||||| ||| || || ||||||| |||||    
T  37725438 cattagattaagtgaagaacatattcttaacatactctctcaacactagatttttcttcacactattttcca 37725509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 136
Target Start/End: Original strand, 38618257 - 38618336
Alignment:
Q  57 ttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacacta 136  Q
    ||||||||||||||||||||||| |   || |||||||||||| |   ||| ||||||||||||||  ||||||||||||    
T  38618257 ttctttcccaccatgggaaagttaagtttgaccattagattaagtagtgaacacattcttatcatagactctcaacacta 38618336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 51974978 - 51975013
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcc 64  Q
    |||||||||||||||||||||||||| |||||||||    
T  51974978 tggtgccatttaatttgggaaaggagggttctttcc 51975013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 35615766 - 35615812
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaa 75  Q
    ||||| ||||||| |||| |||||||| |||||||||||||||||||    
T  35615766 tggtggcatttaacttggaaaaggagacttctttcccaccatgggaa 35615812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 41563818 - 41563748
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  41563818 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 41563748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 45064686 - 45064796
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||   |||| ||||||| |||||||||||   |  |  |||||||||  ||| | ||||| | ||||||||||||| |||    
T  45064686 ggtgccatttaatttgggaaagattagttttttcccatcatgggaaagtaagttttaaccattagatctaattaagaatatactcttatcatactccctc 45064785  T
Q  130 aacactaaatt 140  Q
    |||||| ||||    
T  45064786 aacactcaatt 45064796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 48869769 - 48869815
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaa 76  Q
    |||| ||||||| ||||||||||||| |||||| |||||||||||||    
T  48869769 ggtgacatttaacttgggaaaggagacttcttttccaccatgggaaa 48869815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 49533803 - 49533873
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  49533803 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 49533873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 50267620 - 50267678
Alignment:
Q  88 ccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttt 146  Q
    ||||||||| |||||| || || |||||||||||| |||||| |||||| |||||||||    
T  50267620 ccattagatcaaatgaagactatattcttatcatattctctccacactatattattttt 50267678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 146
Target Start/End: Complemental strand, 51977212 - 51977130
Alignment:
Q  64 ccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttt 146  Q
    |||| |||||||||||| ||||| |||| ||||  ||| | ||||||||| |||| || ||| ||||||| ||||||||||||    
T  51977212 ccactatgggaaagttgttcatgaccatcagatctaattaagaatacatttttattatgctccctcaacattaaattattttt 51977130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 1013520 - 1013471
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    |||| |||||||||||||||||||  ||| ||| ||||||||||||||||    
T  1013520 ggtgtcatttaatttgggaaaggaatgttattttccaccatgggaaagtt 1013471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 49610705 - 49610754
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    ||||||||||| ||||||||||| ||| || |||||| ||||||||||||    
T  49610705 tggtgccattttatttgggaaagaagacttttttccctccatgggaaagt 49610754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 14924681 - 14924721
Alignment:
Q  37 tttaatttgggaaaggagagttctttcccaccatgggaaag 77  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  14924681 tttaatttgggaaagggaagttgtttcccaccatgggaaag 14924721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 14925383 - 14925343
Alignment:
Q  37 tttaatttgggaaaggagagttctttcccaccatgggaaag 77  Q
    ||||||||||| ||||| |||| ||||||||||||||||||    
T  14925383 tttaatttggggaaggaaagttgtttcccaccatgggaaag 14925343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 37822472 - 37822520
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||| |||||||  |||||||||| |||||||||||||||||| |||||    
T  37822472 ggtgtcatttaacctgggaaaggaaagttctttcccaccatggaaaagt 37822520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 42646047 - 42645960
Alignment:
Q  69 atgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcc 159  Q
    ||||||||||||||| |  ||||| |||||||| | || |||| |||||||||  |||||||||||| |   |||||| ||||||||||||    
T  42646047 atgggaaagttgatcttagccatttgattaaataaagagtacactcttatcatgttctctcaacactga---atttttcacactatcttcc 42645960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 3e-54; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 4479750 - 4479603
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  4479750 ggtgccatttaatttgggaaaggagagttctttctcaccatgggaaagttaatcatgtccattagattaaatgaggaacatattcttatcatactctctc 4479651  T
Q  130 aacactaaattattttttacactatcttccaccctctctctttcatgt 177  Q
     |||||||||||||||||| | |||||| || | ||||||||||||||    
T  4479650 cacactaaattattttttatattatctttcatcatctctctttcatgt 4479603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 21472002 - 21471853
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||    
T  21472002 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctctc 21471903  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  21471902 aaccactagattatttttttatactatctttcacactctctctttcatgt 21471853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 30 - 143
Target Start/End: Original strand, 14573261 - 14573374
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  14573261 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatatttttatcatactctctc 14573360  T
Q  130 aacactaaattatt 143  Q
    ||||||| ||||||    
T  14573361 aacactagattatt 14573374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 21471017 - 21471166
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| ||||||||||||||    
T  21471017 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaagaacatattcctatcatactctctc 21471116  T
Q  130 a-acactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    |  ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  21471117 agccactagattatttttttatactatctttcacactctctctttcatgt 21471166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 38834387 - 38834536
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||    
T  38834387 ggtgccatttaatttgggaaaggagggtactttcccaccacgggaaagttgatcatgtccattagattaaatgaggaacatatttttatcatactctctc 38834486  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  38834487 aaccactagattatttttttatactatctttcacactctctctttcatgt 38834536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 37547998 - 37548116
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  37547998 ggtgccatttaatttgggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 37548097  T
Q  130 aa-cactaaattatttttt 147  Q
    || ||||| ||||||||||    
T  37548098 aaccactagattatttttt 37548116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 13134317 - 13134436
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| | |||  ||||||||||| |    
T  13134317 tggtgccatttaatttgggaaaggagagttctttcccaccataggaaagttgatcatgtccattaaattaaatgaggaacatatttctatcatactctat 13134416  T
Q  129 caa-cactaaattatttttt 147  Q
    ||| ||||| ||||||||||    
T  13134417 caaccactagattatttttt 13134436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 14574047 - 14573945
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||| || | |||| ||||||||||||||    
T  14574047 ggtgccatttaatttgggaaaggagagttctttcccaccataagaaagttgatcatatccattagattaaatgagaaacatattcctatcatactctctc 14573948  T
Q  130 aac 132  Q
    |||    
T  14573947 aac 14573945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 38834684 - 38834566
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||| ||| | |||  ||||||||||||||    
T  38834684 ggtgccatttaatttgggaaaggagagttttttcctaccgtgggaaagttgatcatgtccattagattaaatgaagaacatatttctatcatactctctc 38834585  T
Q  130 aa-cactaaattatttttt 147  Q
    || ||||| ||||||||||    
T  38834584 aaccactagattatttttt 38834566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 33433208 - 33433160
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  33433208 ggtgccgtttaatttgagaaaggagagttctttcccaccatgggaaagt 33433160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 169
Target Start/End: Original strand, 4478846 - 4478990
Alignment:
Q  25 gtgttggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatac--attcttatcata 122  Q
    |||| |||||||||||||||||||||| | | |||||||||| |||||||||||  |||    |||||| ||| || |||||| |   ||| ||||||||    
T  4478846 gtgtaggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagtaaatctcaaccattatattcaa-gaggaacattgatt-ttatcata 4478943  T
Q  123 ctctctcaacactaaattattttttacactatcttccaccctctctc 169  Q
    ||||||| |||||| ||||||||||| |||||||| || ||||||||    
T  4478944 ctctctccacactagattattttttatactatctttcatcctctctc 4478990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 1164824 - 1164788
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttccca 66  Q
    |||||||||||||||||||||||||||||||||||||    
T  1164824 ggtgccatttaatttgggaaaggagagttctttccca 1164788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 5276465 - 5276513
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  5276465 ggtggcatttaacttgggaaaggagacttctttcccaccatgggaaagt 5276513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 30544726 - 30544842
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    |||||||||||||||||||||| |  |||| |||||||  ||||||||||||||  |  ||||| |||||||| | || |||| | |||||||  ||||     
T  30544726 tggtgccatttaatttgggaaatggaagttgtttcccatgatgggaaagttgattttagccatttgattaaataaagagtacactattatcatgttctca 30544825  T
Q  129 caacactaaattatttt 145  Q
    ||||||| |||||||||    
T  30544826 caacactgaattatttt 30544842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 11256766 - 11256696
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||||| ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  11256766 attagattaagtgaagaatatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 11256696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 20244197 - 20244127
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||||||| || || |||||||||||||    
T  20244197 attagattaagtgaagaacatattcttaacatgctctctcaacactaaatttttcttcacactatcttcca 20244127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 158
Target Start/End: Complemental strand, 36391706 - 36391592
Alignment:
Q  44 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattatt 143  Q
    ||||||||| ||||| ||| |||||||||||||||  ||  |  |||||| |||||||||||||  || ||||||  || || |||||||||| ||||||    
T  36391706 tgggaaaggggagttgttttccaccatgggaaagtaaattttaaccattaaattaaatgaggaacgcactcttattttattccctcaacactagattatt 36391607  T
Q  144 ttttacactatcttc 158  Q
    |  ||||||||||||    
T  36391606 tcctacactatcttc 36391592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 19521965 - 19521917
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    |||||||||||||||||||||| | | |||||||||| |||||||||||    
T  19521965 ggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 19521917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 36390971 - 36391063
Alignment:
Q  44 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacacta 136  Q
    |||||||||  |||| |||||||||||||||||||  ||  |  ||||||||| |||||||||| ||||| | ||| || |||||||||||||    
T  36390971 tgggaaagggaagttgtttcccaccatgggaaagtaaattttaaccattagatcaaatgaggaacacattttaatcctattctctcaacacta 36391063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 36476776 - 36476696
Alignment:
Q  48 aaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    ||||| ||||||||||||| |||||||||| |  || || |||||||||||||| ||||| ||| | |||||||| |||||    
T  36476776 aaaggggagttctttcccatcatgggaaagattttcttgaccattagattaaataaggaacacaattttatcatagtctct 36476696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 16649705 - 16649752
Alignment:
Q  31 gtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    ||||||||||||||||||||| | | |||||||||| |||||||||||    
T  16649705 gtgccatttaatttgggaaagtaaacttctttcccatcatgggaaagt 16649752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 30486964 - 30486909
Alignment:
Q  55 agttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatac 110  Q
    |||| ||||||||||||||||||||||| |||| |||| ||| |||||| ||||||    
T  30486964 agttttttcccaccatgggaaagttgattatgtgcattggatcaaatgaagaatac 30486909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 11256176 - 11256246
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  11256176 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 11256246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 16426552 - 16426602
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    ||||||||||||||||||||||||   ||| ||||||||||||| ||||||    
T  16426552 tggtgccatttaatttgggaaaggcttgttttttcccaccatggaaaagtt 16426602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 17918711 - 17918641
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  17918711 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 17918641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 28224414 - 28224344
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| |||  ||||||||||||||||| || || |||||||||||||    
T  28224414 attagattaagtgaagaacatattcttaacatgttctctcaacactaaatttttcttcacactatcttcca 28224344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 33847933 - 33848003
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  33847933 attagattaagtgaagaacatattcttaacatgctctctcaacactatatttttcttcacactatcttcca 33848003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 39476575 - 39476645
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||||| ||||||| |||  ||||||||||||| ||| || || |||||||||||||    
T  39476575 attagattaagtgaagaatatattcttaacatgatctctcaacactagatttttcttcacactatcttcca 39476645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 39477351 - 39477281
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  39477351 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 39477281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 41042542 - 41042588
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaa 76  Q
    |||| ||||||||||| ||||||||  ||||||||||||||||||||    
T  41042542 ggtggcatttaatttgagaaaggaggcttctttcccaccatgggaaa 41042588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 45139692 - 45139738
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaa 76  Q
    |||| ||||||||||||||||||||| |||||| ||| |||||||||    
T  45139692 ggtggcatttaatttgggaaaggagacttcttttccatcatgggaaa 45139738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 17069120 - 17069153
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttcttt 62  Q
    ||||||||||||||||| ||||||||||||||||    
T  17069120 tggtgccatttaatttgagaaaggagagttcttt 17069153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 30545483 - 30545434
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    |||||||||||||||||||||||  |||| |||||||  |||||||||||    
T  30545483 ggtgccatttaatttgggaaagggaagttgtttcccatgatgggaaagtt 30545434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 37157521 - 37157570
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 78  Q
    ||||||||||||||||||||||| | | |||||||||| ||| |||||||    
T  37157521 tggtgccatttaatttgggaaagcaaacttctttcccatcataggaaagt 37157570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 37546613 - 37546508
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctct 128  Q
    ||||| |||||||  ||||||||| ||||| ||||||| |||||||||||| |   || ||| |||||||| | | ||| ||||||||||| ||  ||||    
T  37546613 tggtggcatttaaaatgggaaaggggagttgtttcccatcatgggaaagttaaatttgaccactagattaagtaacgaacacattcttatcgtagactct 37546514  T
Q  129 caacac 134  Q
    ||||||    
T  37546513 caacac 37546508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 40992222 - 40992271
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    |||||||||||||||||||||||   ||| ||||| ||||||||||||||    
T  40992222 ggtgccatttaatttgggaaaggtttgttttttcctaccatgggaaagtt 40992271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 37545692 - 37545768
Alignment:
Q  46 ggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcata 122  Q
    |||||||  |||| |||||||||||||||||||| |   || |||||||||||| | | ||| ||||||||||||||    
T  37545692 ggaaagggaagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaacacattcttatcata 37545768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 208 - 58
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| | |||| ||||||||||||||    
T  208 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgattatgttcattagattaaatgaggaacatattcctatcatactctctc 109  T
Q  130 aa-cactaaatta--ttttttacactatcttccaccctctctctttcatgt 177  Q
    || ||||| ||||  ||||||| |||||||| ||| |||||||||||||||    
T  108 aaccactagattattttttttatactatctttcacactctctctttcatgt 58  T

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Target: scaffold0332 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 9306 - 9162
Alignment:
Q  30 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 129  Q
    |||| |||||||||||| ||||||||||| |||  |||||||| |||||| ||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  9306 ggtgtcatttaatttggaaaaggagagttttttttcaccatggaaaagttcatcatgtccattagattaaatgatgaacatattcttatcatactctctc 9207  T
Q  130 aa-cactaaatta-ttttttacactatcttccaccctctctcttt 172  Q
    || ||||| |||| ||||||| |||||||| ||| ||||||||||    
T  9206 aaccactagattatttttttatactatctttcacactctctcttt 9162  T

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Target: scaffold0700 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 5351 - 5457
Alignment:
Q  62 tcccaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttccac 161  Q
    |||||| || ||||||| ||| || |||||||||||||||||| || ||||||||||| |||||| || | |||| |||||||||||   ||||||||||    
T  5351 tcccactataggaaagtagattatatccattagattaaatgagaaacacattcttatcctactctttccatactagattattttttatgatatcttccac 5450  T
Q  162 cctctct 168  Q
     ||||||    
T  5451 actctct 5457  T

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Target: scaffold0155 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 17338 - 17388
Alignment:
Q  29 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagtt 79  Q
    |||||||||||||||||| |||||   ||| ||||||||||||||||||||    
T  17338 tggtgccatttaatttggaaaaggcttgttttttcccaccatgggaaagtt 17388  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 11325 - 11395
Alignment:
Q  90 attagattaaatgaggaatacattcttatcatactctctcaacactaaattattttttacactatcttcca 160  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||||||| ||| || || |||||||||||||    
T  11325 attagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttcca 11395  T

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Target: scaffold2003 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold2003
Description:

Target: scaffold2003; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 649 - 702
Alignment:
Q  88 ccattagattaaatgaggaatacattcttatcatactctctcaacactaaatta 141  Q
    |||||||||||||| | ||||||| |||||||||||||  ||||||||| ||||    
T  649 ccattagattaaataaagaatacactcttatcatactccttcaacactagatta 702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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