View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13046_low_6 (Length: 269)
Name: NF13046_low_6
Description: NF13046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13046_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 40002012 - 40002280
Alignment:
| Q |
1 |
tggtctatctgtaaatgacatatttgtgatgtctacatgtaaacaactatgcttttaatttattcctaacctcattattcctcaaaaagacttttacccc |
100 |
Q |
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| T |
40002012 |
tggtctatctgtaaatgacatatttgtgatgtctacatgtaaacaactatgcttttaatttattcctaacctcattattcctcaaaaagacttttacccc |
40002111 |
T |
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| Q |
101 |
taaaagttagtggttatgatctggattctagaagaaggtctttacatcaactaattaccgtggacgcaaagctgcatctgaaacgtaattaacatgaatg |
200 |
Q |
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| T |
40002112 |
tgaaagttagtggttatgatctggattctagaagaaggtctttacatcaactaattaccgtgggcgcaaaactgcatctgaaacgtaatcaacatgaatg |
40002211 |
T |
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| Q |
201 |
gataagtaaagtttttctcactgga--------tggtaaaaacacaaattaataatataggtgatgatg |
261 |
Q |
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||||||| |||||||||||||| || || |||||||||||| ||||||||||||||| |||| |
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| T |
40002212 |
gataagtgaagtttttctcactcgatgatgaactgataaaaacacaaactaataatataggtgaagatg |
40002280 |
T |
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