View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13047_high_4 (Length: 358)

Name: NF13047_high_4
Description: NF13047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13047_high_4
NF13047_high_4
[»] chr6 (26 HSPs)
chr6 (29-355)||(22735686-22736016)
chr6 (144-238)||(4844153-4844247)
chr6 (128-212)||(9031760-9031844)
chr6 (139-235)||(22730695-22730792)
chr6 (139-235)||(30833022-30833118)
chr6 (164-235)||(7233995-7234066)
chr6 (139-218)||(20858394-20858473)
chr6 (139-179)||(8176001-8176041)
chr6 (139-179)||(34524880-34524920)
chr6 (128-218)||(5134445-5134536)
chr6 (128-179)||(17176143-17176194)
chr6 (195-257)||(16110964-16111026)
chr6 (139-176)||(8309169-8309206)
chr6 (139-235)||(20149973-20150070)
chr6 (139-235)||(22182762-22182859)
chr6 (139-257)||(22389724-22389840)
chr6 (139-235)||(26669653-26669749)
chr6 (139-218)||(32394030-32394109)
chr6 (139-177)||(1488093-1488131)
chr6 (139-212)||(2945600-2945674)
chr6 (128-173)||(6219348-6219393)
chr6 (139-232)||(30668181-30668274)
chr6 (143-179)||(8253640-8253676)
chr6 (139-235)||(9051285-9051381)
chr6 (139-179)||(10455747-10455787)
chr6 (128-179)||(24470441-24470493)
[»] chr8 (25 HSPs)
chr8 (139-257)||(216119-216237)
chr8 (139-257)||(692679-692797)
chr8 (139-257)||(696888-697006)
chr8 (139-257)||(729742-729860)
chr8 (139-257)||(853637-853755)
chr8 (139-238)||(220353-220452)
chr8 (139-238)||(689508-689607)
chr8 (139-238)||(733976-734075)
chr8 (139-238)||(857872-857971)
chr8 (139-264)||(12560037-12560161)
chr8 (139-212)||(39432345-39432418)
chr8 (147-235)||(22847256-22847344)
chr8 (140-235)||(11900572-11900666)
chr8 (139-179)||(14011088-14011128)
chr8 (139-179)||(26657861-26657901)
chr8 (122-178)||(41793024-41793079)
chr8 (140-179)||(16621550-16621589)
chr8 (190-235)||(25408690-25408735)
chr8 (140-237)||(36593200-36593297)
chr8 (194-235)||(39208863-39208904)
chr8 (138-179)||(43554453-43554494)
chr8 (139-179)||(4955033-4955073)
chr8 (139-179)||(7345433-7345473)
chr8 (139-179)||(29937215-29937255)
chr8 (158-238)||(42711184-42711264)
[»] chr4 (29 HSPs)
chr4 (139-235)||(49039439-49039535)
chr4 (139-235)||(41492493-41492588)
chr4 (139-235)||(54264933-54265029)
chr4 (139-238)||(21023343-21023441)
chr4 (139-238)||(49743367-49743466)
chr4 (168-238)||(47416502-47416572)
chr4 (139-232)||(35230292-35230385)
chr4 (139-179)||(20610744-20610784)
chr4 (139-235)||(54854173-54854269)
chr4 (128-235)||(12585553-12585660)
chr4 (141-179)||(20166323-20166361)
chr4 (139-179)||(12820455-12820496)
chr4 (128-257)||(34370917-34371046)
chr4 (139-179)||(1589207-1589247)
chr4 (139-179)||(4419736-4419776)
chr4 (143-179)||(38657549-38657585)
chr4 (139-218)||(48512203-48512283)
chr4 (144-235)||(6202613-6202704)
chr4 (139-234)||(36045835-36045930)
chr4 (144-235)||(37997840-37997931)
chr4 (144-179)||(42432018-42432053)
chr4 (139-212)||(9084763-9084837)
chr4 (139-235)||(24039893-24039985)
chr4 (138-179)||(31480274-31480316)
chr4 (139-181)||(43049981-43050023)
chr4 (139-232)||(49319398-49319492)
chr4 (139-176)||(56913-56950)
chr4 (139-179)||(36008279-36008320)
chr4 (139-179)||(27921901-27921941)
[»] chr1 (47 HSPs)
chr1 (139-235)||(9768803-9768899)
chr1 (139-238)||(9769571-9769670)
chr1 (139-235)||(43020616-43020712)
chr1 (140-263)||(50575907-50576030)
chr1 (140-238)||(13941325-13941423)
chr1 (139-212)||(5684127-5684199)
chr1 (139-235)||(3341730-3341826)
chr1 (139-235)||(11238022-11238118)
chr1 (141-261)||(41677067-41677187)
chr1 (139-257)||(1721145-1721263)
chr1 (139-257)||(2643787-2643905)
chr1 (139-177)||(47645848-47645886)
chr1 (141-238)||(195051-195148)
chr1 (128-177)||(42801873-42801922)
chr1 (138-235)||(48565141-48565238)
chr1 (139-179)||(18003821-18003861)
chr1 (127-238)||(4511516-4511627)
chr1 (139-238)||(16182814-16182913)
chr1 (139-238)||(18646693-18646790)
chr1 (139-237)||(9410320-9410417)
chr1 (141-179)||(42908778-42908816)
chr1 (139-236)||(4605836-4605932)
chr1 (138-179)||(12489969-12490010)
chr1 (138-179)||(18976007-18976048)
chr1 (139-179)||(4146339-4146379)
chr1 (138-174)||(5862132-5862168)
chr1 (190-234)||(8890082-8890126)
chr1 (139-179)||(18179333-18179373)
chr1 (139-179)||(52961132-52961172)
chr1 (144-235)||(2903021-2903112)
chr1 (139-181)||(47939246-47939289)
chr1 (139-212)||(9527430-9527504)
chr1 (139-212)||(13870098-13870172)
chr1 (139-177)||(28417330-28417368)
chr1 (139-177)||(51917554-51917592)
chr1 (140-181)||(9074002-9074043)
chr1 (139-180)||(37262154-37262195)
chr1 (196-236)||(1576114-1576154)
chr1 (139-179)||(7015737-7015777)
chr1 (139-179)||(7906376-7906416)
chr1 (139-179)||(9004351-9004391)
chr1 (139-218)||(18923896-18923975)
chr1 (139-179)||(23758303-23758343)
chr1 (139-171)||(28284008-28284040)
chr1 (139-179)||(33176153-33176193)
chr1 (163-235)||(41182803-41182874)
chr1 (139-179)||(47141856-47141896)
[»] chr3 (32 HSPs)
chr3 (139-235)||(40160740-40160836)
chr3 (140-239)||(4045624-4045723)
chr3 (139-238)||(28951871-28951970)
chr3 (139-179)||(16874240-16874280)
chr3 (139-231)||(24130564-24130656)
chr3 (139-238)||(3993698-3993797)
chr3 (139-238)||(4010009-4010108)
chr3 (139-229)||(3973307-3973397)
chr3 (139-229)||(3996479-3996569)
chr3 (199-257)||(6054197-6054255)
chr3 (138-176)||(12143460-12143498)
chr3 (140-178)||(51017796-51017834)
chr3 (139-179)||(19137624-19137664)
chr3 (139-179)||(24160578-24160618)
chr3 (139-175)||(30745785-30745821)
chr3 (185-236)||(17262270-17262321)
chr3 (145-232)||(19149435-19149522)
chr3 (139-238)||(23025902-23026001)
chr3 (139-174)||(33533208-33533243)
chr3 (144-235)||(34407084-34407175)
chr3 (139-178)||(51412041-51412080)
chr3 (141-179)||(12236606-12236644)
chr3 (145-235)||(16985031-16985121)
chr3 (139-257)||(31680737-31680854)
chr3 (139-218)||(6951802-6951880)
chr3 (144-173)||(46969008-46969037)
chr3 (139-179)||(23237367-23237407)
chr3 (151-235)||(27119293-27119377)
chr3 (150-218)||(40996882-40996950)
chr3 (139-218)||(41767779-41767859)
chr3 (140-179)||(43774190-43774230)
chr3 (139-179)||(43911619-43911659)
[»] chr2 (26 HSPs)
chr2 (139-238)||(18065259-18065358)
chr2 (139-238)||(36386105-36386203)
chr2 (139-236)||(2057486-2057581)
chr2 (139-235)||(1244574-1244670)
chr2 (138-238)||(29896152-29896252)
chr2 (149-235)||(16310016-16310101)
chr2 (140-177)||(44132615-44132652)
chr2 (139-235)||(18089734-18089830)
chr2 (139-235)||(22355088-22355184)
chr2 (139-235)||(34107279-34107375)
chr2 (139-179)||(36277752-36277792)
chr2 (148-179)||(10602019-10602050)
chr2 (138-177)||(19352870-19352909)
chr2 (141-220)||(32288383-32288462)
chr2 (131-178)||(32944059-32944106)
chr2 (145-192)||(34376553-34376600)
chr2 (139-181)||(6496444-6496486)
chr2 (145-235)||(29713083-29713173)
chr2 (138-179)||(13294434-13294475)
chr2 (196-237)||(28679879-28679920)
chr2 (131-179)||(32527127-32527176)
chr2 (205-257)||(2394945-2394997)
chr2 (139-179)||(5772865-5772905)
chr2 (139-218)||(11133080-11133160)
chr2 (143-179)||(14307744-14307780)
chr2 (144-264)||(39118403-39118523)
[»] scaffold0011 (1 HSPs)
scaffold0011 (147-236)||(19388-19477)
[»] chr5 (23 HSPs)
chr5 (139-232)||(38040271-38040363)
chr5 (139-235)||(7147013-7147109)
chr5 (140-181)||(42781642-42781683)
chr5 (139-179)||(11246544-11246584)
chr5 (123-179)||(25660901-25660957)
chr5 (139-235)||(31556823-31556919)
chr5 (139-179)||(36742017-36742057)
chr5 (139-237)||(42553133-42553230)
chr5 (139-179)||(6806690-6806731)
chr5 (137-238)||(28768600-28768701)
chr5 (140-220)||(31907657-31907737)
chr5 (139-179)||(35813292-35813332)
chr5 (140-218)||(9963421-9963500)
chr5 (144-179)||(17557040-17557075)
chr5 (138-181)||(38040140-38040183)
chr5 (139-178)||(40250228-40250267)
chr5 (139-225)||(16969672-16969758)
chr5 (126-179)||(34325257-34325310)
chr5 (143-179)||(20186875-20186911)
chr5 (186-238)||(22687872-22687924)
chr5 (139-235)||(31280374-31280469)
chr5 (160-212)||(38230222-38230273)
chr5 (158-238)||(39684262-39684342)
[»] chr7 (30 HSPs)
chr7 (139-235)||(10020463-10020559)
chr7 (139-179)||(7465471-7465511)
chr7 (144-212)||(23799310-23799378)
chr7 (139-179)||(24427368-24427408)
chr7 (139-235)||(35498403-35498498)
chr7 (159-235)||(39524713-39524788)
chr7 (139-214)||(8147201-8147276)
chr7 (128-179)||(35195837-35195888)
chr7 (139-220)||(7392315-7392396)
chr7 (141-237)||(11808045-11808142)
chr7 (139-176)||(17305443-17305480)
chr7 (139-212)||(37410498-37410571)
chr7 (138-179)||(37995596-37995636)
chr7 (139-235)||(1649157-1649253)
chr7 (139-235)||(43635593-43635689)
chr7 (139-218)||(10474523-10474602)
chr7 (198-257)||(26734243-26734302)
chr7 (148-235)||(32309142-32309229)
chr7 (128-179)||(38032905-38032956)
chr7 (139-212)||(41139091-41139165)
chr7 (140-177)||(19924773-19924810)
chr7 (139-179)||(21285403-21285444)
chr7 (128-177)||(27726421-27726470)
chr7 (139-212)||(32814832-32814905)
chr7 (138-179)||(43209405-43209446)
chr7 (139-179)||(14772385-14772425)
chr7 (139-179)||(15222837-15222877)
chr7 (140-179)||(20527479-20527519)
chr7 (139-235)||(43712307-43712403)
chr7 (122-178)||(45267977-45268033)
[»] scaffold0712 (1 HSPs)
scaffold0712 (139-179)||(4525-4565)
[»] scaffold0709 (1 HSPs)
scaffold0709 (139-179)||(4545-4585)
[»] scaffold0168 (1 HSPs)
scaffold0168 (139-179)||(34083-34123)
[»] scaffold0219 (1 HSPs)
scaffold0219 (123-177)||(21016-21070)
[»] scaffold0126 (1 HSPs)
scaffold0126 (139-179)||(25011-25051)
[»] scaffold0119 (1 HSPs)
scaffold0119 (139-235)||(1044-1140)
[»] scaffold0054 (1 HSPs)
scaffold0054 (139-235)||(67166-67262)


Alignment Details
Target: chr6 (Bit Score: 238; Significance: 1e-132; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 29 - 355
Target Start/End: Original strand, 22735686 - 22736016
Alignment:
Q  29 actttagtattttgaattcagaagaaagaacaagatgagagttccattaattgttgcatggtggttatagcattgagctttattaatagtggacatatcg 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |    
T  22735686 actttagtattttgaattcagaagaaagaacaagatgagagttccattaattgttgcatggtggttatagcattgagcttcattaatagttgacatattg 22735785  T
Q  129 tccccgtagacatagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtg 228  Q
    || |||| | |||| |||||||| |||||||||| ||||||||||||||||| |  |||||||||| |||||||||||||||||||||||| ||||||||    
T  22735786 tctccgttggcataactcagttgacagagacatgtattgttatatgcagggtctggggtttgaatcccggacacctcacttatttaccttgggaaaggtg 22735885  T
Q  229 aattctaaccgatagtctatct----gacaaaagaaatagtggacacatcttatttgttttaagggttatgctctattatttgtgttagtaggatatgag 324  Q
    ||||||||||  ||||||||||    || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22735886 aattctaaccagtagtctatctgaaagaaaaaaaaaatagtggacacatcttatttgttttaagggttatgctctattatttgtgttagtaggatatgag 22735985  T
Q  325 ttgagttgatgttggcttgttttttatattt 355  Q
    ||| |||||||||||||||||||||||||||    
T  22735986 ttgcgttgatgttggcttgttttttatattt 22736016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 4844153 - 4844247
Alignment:
Q  144 ctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    |||||||||||| ||||||||||||||||||||||| |   ||||| || ||| ||||||||||||||| ||||||| ||| |||||||||||||    
T  4844153 ctcagttggcagggacatgcattgttatatgcaggggtcggggtttaaacctcagacacctcacttattcaccttgaaaaaagtgaattctaacc 4844247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 212
Target Start/End: Original strand, 9031760 - 9031844
Alignment:
Q  128 gtccccgtagacatagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatt 212  Q
    ||||||||  |||||||||||||||||| ||||||||||||||||||||||| ||   ||||||| ||| |||||| ||||||||    
T  9031760 gtccccgtgaacatagctcagttggcagggacatgcattgttatatgcagggcttgaagtttgaacctcagacaccccacttatt 9031844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 22730792 - 22730695
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgaga-aaggtgaattcta 235  Q
    |||| ||||||||||||||||||||||||||||||||||||  |   ||| ||| |||||||||| |||||||| ||||| | | |||||||||||||    
T  22730792 cataactcagttggcagagacatgcattgttatatgcagggactgaagttcgaacctcggacaccccacttattcaccttaaaataaggtgaattcta 22730695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 30833022 - 30833118
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||| ||||||||||| ||||||||||||||||||||||| |   |||| ||| | |||||||| ||||||||  |||||| ||||| ||||||||    
T  30833022 catagttcagttggcagggacatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattctccttgaaaaaggagaattcta 30833118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 7233995 - 7234066
Alignment:
Q  164 attgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||||||||||  |  |||||||| |||||||||| |||||||| ||||||| ||||||||||||||    
T  7233995 attgttatatgcaggggctggggtttgaacctcggacaccccacttattcaccttgaaaaaggtgaattcta 7234066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 218
Target Start/End: Complemental strand, 20858473 - 20858394
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttacctt 218  Q
    |||| |||||||||||| ||||||||||||||||||||||| ||  |||| ||||  |||||||| || |||||||||||    
T  20858473 cataactcagttggcagggacatgcattgttatatgcaggggttggggttcgaattccggacaccccatttatttacctt 20858394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 8176001 - 8176041
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  8176001 catagctcagttgacagagacatgcattgttatatgcaggg 8176041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 34524880 - 34524920
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  34524880 catagctcagttggcagggacatgcattgttatatgcaggg 34524920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 5134536 - 5134445
Alignment:
Q  128 gtccccgtagacatagctcagttggcagagac-atgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttacctt 218  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||||||| |    ||||| ||| ||| |||||| |||||||| |||||    
T  5134536 gtccccgtaagcatagctcagttggcagagacaatgcattgttatatgcagaggccgcggttcgaacctcagacaccccacttattcacctt 5134445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 17176143 - 17176194
Alignment:
Q  128 gtccccgtagacatagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||| |||| |||||||||||||| ||| |||||||||||||||||||||||    
T  17176143 gtcctcgtaaacatagctcagttgacagggacatgcattgttatatgcaggg 17176194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 16111026 - 16110964
Alignment:
Q  195 tcggacacctcacttatttaccttgagaaaggtgaattctaaccgatagtctatctgacaaaa 257  Q
    |||||||||||||||||||| ||||| ||||||||||||||| | ||||  ||||| ||||||    
T  16111026 tcggacacctcacttatttatcttgaaaaaggtgaattctaatcaataggttatcttacaaaa 16110964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 8309169 - 8309206
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgca 176  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  8309169 catagctcagttggcagggacatgcattgttatatgca 8309206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 20150070 - 20149973
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctc-ggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||||||||||||| || ||| ||| |||||||||| |||| ||  |||| ||| | | ||||||| |||||||| ||||||| ||||||||||||||    
T  20150070 catagctcagttgggagggacttgcgttgttatatgtagggattggggttcgaacccctggacaccccacttattcaccttgaaaaaggtgaattcta 20149973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 22182762 - 22182859
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctc-ggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||||||||||||| || ||| ||| |||||||||| |||| ||  |||| ||| | | ||||||| |||||||| ||||||| ||||||||||||||    
T  22182762 catagctcagttgggagggacttgcgttgttatatgtagggattggggttcgaacccctggacaccccacttattcaccttgaaaaaggtgaattcta 22182859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 22389840 - 22389724
Alignment:
Q  139 catagctcagttggcagagaca-tgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaac 237  Q
    |||||||||||||| || |||| |||||| |||||||||||| | | |||| ||||| |||||||| |||||||| |||||    ||||||||||||| |    
T  22389840 catagctcagttggtag-gacaatgcattattatatgcaggggtcagggttcgaatcccggacaccccacttattcacctt--ataaggtgaattctagc 22389744  T
Q  238 cgatagtctatctgacaaaa 257  Q
    || ||| ||| |||||||||    
T  22389743 cgctagactacctgacaaaa 22389724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 26669749 - 26669653
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||||||||||||| || |||||||||  ||||||| ||||  |  |||| ||| | | |||||| |||||||| ||||||| ||||||||||||||    
T  26669749 catagctcagttggtagggacatgcataattatatgtaggggctggggttcgaaccccagacaccccacttattcaccttgaaaaaggtgaattcta 26669653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 32394030 - 32394109
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttacctt 218  Q
    |||| |||||||||||| |||||| |||||  ||||||| | ||  |||||||||| |||||||| |||||||| |||||    
T  32394030 cataactcagttggcagggacatgtattgtcttatgcagaggttgaggtttgaatcccggacaccccacttattcacctt 32394109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 1488093 - 1488131
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcag 177  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  1488093 catatctcaattggcagagacatgcattgttatatgcag 1488131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 2945600 - 2945674
Alignment:
Q  139 catagctcagttggcagagaca-tgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatt 212  Q
    ||||||||||||||||| |||| ||||||||||||||||||| |   ||||  || |||||||||| ||||||||    
T  2945600 catagctcagttggcagggacaatgcattgttatatgcaggggtcggggttcaaacctcggacaccccacttatt 2945674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 6219348 - 6219393
Alignment:
Q  128 gtccccgtagacatagctcagttggcagagacatgcattgttatat 173  Q
    ||||||||  |||||||||||||||||| |||||||||| ||||||    
T  6219348 gtccccgtgaacatagctcagttggcagggacatgcattattatat 6219393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 232
Target Start/End: Complemental strand, 30668274 - 30668181
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaatt 232  Q
    |||| ||||||||||| ||||||||||| |||||||||||| | |  ||| ||| | || ||||| |||||||| ||||| | ||| |||||||    
T  30668274 cataactcagttggcatagacatgcattattatatgcaggggtcagagttcgaaccacgaacaccccacttattcaccttaaaaaatgtgaatt 30668181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 8253676 - 8253640
Alignment:
Q  143 gctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||  |||||||||||||||||||||||    
T  8253676 gctcagttggcatggacatgcattgttatatgcaggg 8253640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 9051381 - 9051285
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||| ||||||  || ||||||||||||||| ||||  || |||| ||| | |||||| ||||||||||   ||||| ||||| ||||||||    
T  9051381 catagctcaattggcaaggatatgcattgttatatgtagggactagggttcgaaccccggacaactcacttattcgtcttgaaaaaggagaattcta 9051285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 10455747 - 10455787
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||| |||||||||||  ||||||||||||||||||||||    
T  10455747 catagttcagttggcaggaacatgcattgttatatgcaggg 10455787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 24470493 - 24470441
Alignment:
Q  128 gtccccgtagacatagctcagttggcagagac-atgcattgttatatgcaggg 179  Q
    |||||||||  ||||||||||||||||||||| ||||||| |||||| |||||    
T  24470493 gtccccgtaagcatagctcagttggcagagacaatgcattattatatacaggg 24470441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 6e-25; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 216237 - 216119
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    ||||||||||||||||| ||||| ||||||||||||||| | | | |||| ||||| ||||||||||||||||| ||||||| |||||||||| ||||||    
T  216237 catagctcagttggcagggacatacattgttatatgcagaggtcagggttcgaatcacggacacctcacttattcaccttgaaaaaggtgaatactaacc 216138  T
Q  239 gatagtctatctgacaaaa 257  Q
      ||| ||| |||||||||    
T  216137 actagactacctgacaaaa 216119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 692797 - 692679
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    ||||||||||||||||| ||||| ||||||||||||||| | | | |||| ||||| ||||||||||||||||| ||||||| |||||||||| ||||||    
T  692797 catagctcagttggcagggacatacattgttatatgcagaggtcagggttcgaatcacggacacctcacttattcaccttgaaaaaggtgaatactaacc 692698  T
Q  239 gatagtctatctgacaaaa 257  Q
      ||| ||| |||||||||    
T  692697 actagactacctgacaaaa 692679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 697006 - 696888
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    ||||||||||||||||| ||||| ||||||||||||||| | | | |||| ||||| ||||||||||||||||| ||||||| |||||||||| ||||||    
T  697006 catagctcagttggcagggacatacattgttatatgcagaggtcagggttcgaatcacggacacctcacttattcaccttgaaaaaggtgaatactaacc 696907  T
Q  239 gatagtctatctgacaaaa 257  Q
      ||| ||| |||||||||    
T  696906 actagactacctgacaaaa 696888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 729860 - 729742
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    ||||||||||||||||| ||||| ||||||||||||||| | | | |||| ||||| ||||||||||||||||| ||||||| |||||||||| ||||||    
T  729860 catagctcagttggcagggacatacattgttatatgcagaggtcagggttcgaatcacggacacctcacttattcaccttgaaaaaggtgaatactaacc 729761  T
Q  239 gatagtctatctgacaaaa 257  Q
      ||| ||| |||||||||    
T  729760 actagactacctgacaaaa 729742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 853755 - 853637
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    ||||||||||||||||| ||||| ||||||||||||||| | | | |||| ||||| ||||||||||||||||| ||||||| |||||||||| ||||||    
T  853755 catagctcagttggcagggacatacattgttatatgcagaggtcagggttcgaatcacggacacctcacttattcaccttgaaaaaggtgaatactaacc 853656  T
Q  239 gatagtctatctgacaaaa 257  Q
      ||| ||| |||||||||    
T  853655 actagactacctgacaaaa 853637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 220452 - 220353
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    ||||||||||||||||| |||||||| |||||||||||| | | | |||| ||||| |||||||| |||||||| ||||||| |||||||||||||||||    
T  220452 catagctcagttggcagggacatgcaatgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattctaacc 220353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 689607 - 689508
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    ||||||||||||||||| |||||||| |||||||||||| | | | |||| ||||| |||||||| |||||||| ||||||| |||||||||||||||||    
T  689607 catagctcagttggcagggacatgcaatgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattctaacc 689508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 734075 - 733976
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    ||||||||||||||||| |||||||| |||||||||||| | | | |||| ||||| |||||||| |||||||| ||||||| |||||||||||||||||    
T  734075 catagctcagttggcagggacatgcaatgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattctaacc 733976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 857971 - 857872
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    ||||||||||||||||| |||||||| |||||||||||| | | | |||| ||||| |||||||| |||||||| ||||||| |||||||||||||||||    
T  857971 catagctcagttggcagggacatgcaatgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattctaacc 857872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 139 - 264
Target Start/End: Original strand, 12560037 - 12560161
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    |||||||||||||||||  |||  ||||||||||||||||| ||  |||| ||| |||  |||||||||||||||||||||| |||||| ||||||| ||    
T  12560037 catagctcagttggcaggaacaa-cattgttatatgcaggggttggggttcgaacctcaaacacctcacttatttaccttgaaaaaggtcaattctagcc 12560135  T
Q  239 gatagtctatctgacaaaagaaatag 264  Q
      ||| |||  |||||||| ||||||    
T  12560136 attagactacttgacaaaaaaaatag 12560161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 39432418 - 39432345
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatt 212  Q
    ||||||||||||||||| |||||||| |||||||||||||| ||  |||| ||| ||| |||||| ||||||||    
T  39432418 catagctcagttggcagggacatgcaatgttatatgcaggggttggggttcgaacctcagacaccccacttatt 39432345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 235
Target Start/End: Complemental strand, 22847344 - 22847256
Alignment:
Q  147 agttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||| ||||||||||||||||||||||| |   |||| ||| | |  |||||||||||||| ||||| | ||||||||||||||    
T  22847344 agttggcagggacatgcattgttatatgcaggggtcgaggttcgaaccccacacacctcacttattcaccttaaaaaaggtgaattcta 22847256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 11900572 - 11900666
Alignment:
Q  140 atagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||||||||||  ||||||||| |||||||||||| ||  |||||||| | | || ||| |||||||| | ||||| ||||||||||||||    
T  11900572 atagctcagttggcaggaacatgcattattatatgcaggggttgaggtttgaa-cacagataccccacttattcatcttgaaaaaggtgaattcta 11900666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 14011128 - 14011088
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  14011128 catagttcagttggcagggacatgcattgttatatgcaggg 14011088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 26657861 - 26657901
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  26657861 catagctcagttggtagggacatgcattgttatatgcaggg 26657901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 41793079 - 41793024
Alignment:
Q  122 catatcgtccccgtagacatagctcagttggcagagacatgcattgttatatgcagg 178  Q
    ||||||||||||||   ||||||||| ||||||| ||||||||||||||||||||||    
T  41793079 catatcgtccccgtgagcatagctcaattggcag-gacatgcattgttatatgcagg 41793024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 16621550 - 16621589
Alignment:
Q  140 atagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  16621550 atagctcagttggcagagatatgcattattatatgcaggg 16621589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 25408735 - 25408690
Alignment:
Q  190 gaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||||||||||||||||||  ||||||||||  |||||||||||||    
T  25408735 gaatctcggacacctcactgttttaccttgaagaaggtgaattcta 25408690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 36593200 - 36593297
Alignment:
Q  140 atagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaac 237  Q
    ||||||||||||| || ||||||||||||||||| ||| | ||  |||| ||||||  |||| |  ||||||| ||||| | ||| ||||||||||||    
T  36593200 atagctcagttggtagggacatgcattgttatatacagaggttggggttcgaatcttagacatccaacttattcaccttaaaaaatgtgaattctaac 36593297  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 39208904 - 39208863
Alignment:
Q  194 ctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||||||||||||| ||||| | ||||||||||||||    
T  39208904 ctcggacacctcacttattcacctttaaaaaggtgaattcta 39208863  T

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Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 43554453 - 43554494
Alignment:
Q  138 acatagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||||||||||||||||| ||||| |||||||||||| ||||    
T  43554453 acatagctcagttggcagcgacatccattgttatatgtaggg 43554494  T

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Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 4955073 - 4955033
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||| |||| |||||||||||||| ||||||||||||||||    
T  4955073 cataactcaattggcagagacatgtattgttatatgcaggg 4955033  T

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Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 7345433 - 7345473
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||| |||||||||||| |||||||||| ||||||||||||    
T  7345433 cataactcagttggcagggacatgcattattatatgcaggg 7345473  T

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Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 29937215 - 29937255
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||||||||||||| || |||||| ||||||||||||||||    
T  29937215 catagctcagttggtagggacatgtattgttatatgcaggg 29937255  T

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Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 42711184 - 42711264
Alignment:
Q  158 acatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    |||| ||||||||||||||||| | | | ||||||   |||||| | ||||||||| |||||| ||| |||||||||||||    
T  42711184 acatacattgttatatgcaggggtcaggatttgaactccggacatcccacttatttgccttgaaaaatgtgaattctaacc 42711264  T

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Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 49039535 - 49039439
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||||||||||| |||||||||||||||||||||||  |  |||| ||| | |||||||| |||||||| ||||||| ||||||||||||||    
T  49039535 catagctcagttggcagggacatgcattgttatatgcagggactggggttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattcta 49039439  T

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Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 41492588 - 41492493
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||||||||||| |||||||||| ||||||||||||     |||| ||| || ||||||| |||||||||||||||| ||||||||||||||    
T  41492588 catagctcagttggcagggacatgcattattatatgcaggggccggggttcgaacct-ggacaccccacttatttaccttgaaaaaggtgaattcta 41492493  T

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Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 54264933 - 54265029
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||||||||| ||||||| ||||||||||||||||| |||| | | ||||  || |||| |||||||||||||| ||||||| |||| |||||||||    
T  54264933 catagctcagctggcagaaacatgcattgttatatgtaggggtcagggttcaaacctcgaacacctcacttattcaccttgaaaaagatgaattcta 54265029  T

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Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 21023441 - 21023343
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    |||||||||||||||||| |||||||||||||||| | ||| ||  |||| ||| | | |||||| |||||||| ||||||| |||||||||||||||||    
T  21023441 catagctcagttggcagaaacatgcattgttatat-ccggggttggggttcgaacccccgacaccccacttattcaccttgaaaaaggtgaattctaacc 21023343  T

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Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 49743367 - 49743466
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    ||||| ||||||||||| || ||||||| ||||||||||||     | || ||| | ||||||||||||||||||||||||| ||||||||||| |||||    
T  49743367 catagttcagttggcagggatatgcattattatatgcaggggccgggattcgaaccccggacacctcacttatttaccttgaaaaaggtgaattttaacc 49743466  T

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Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 47416502 - 47416572
Alignment:
Q  168 ttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    |||||||||||| ||  |||| |||||||||||||| |||||||| || |||| |||||||||||||||||    
T  47416502 ttatatgcaggggttggggttcgaatctcggacaccccacttattcactttgaaaaaggtgaattctaacc 47416572  T

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Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 232
Target Start/End: Complemental strand, 35230385 - 35230292
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaatt 232  Q
    |||||||||||||| || || |||||||| |||||||| || |   |||| ||| |||||||||| |||||||||||||||| | |||||||||    
T  35230385 catagctcagttggtagggatatgcattgctatatgcatgggtcggggttcgaacctcggacaccccacttatttaccttgaaataggtgaatt 35230292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 20610744 - 20610784
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  20610744 catagctcagttggcagggacatgcattgttatatgcaggg 20610784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 54854269 - 54854173
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||||||||||| |||||||||  ||||||||||||  |  |||| ||| | |||||| | |||||||| ||||||| ||| ||||||||||    
T  54854269 catagctcagttggcagggacatgcataattatatgcaggggctggggttcgaaccccggacatcacacttattcaccttgaaaaaagtgaattcta 54854173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 12585660 - 12585553
Alignment:
Q  128 gtccccgtagacatagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggt 227  Q
    ||||||||| ||||| |||||||||||| |||||||||||||||||| | ||      ||| ||| | || |||||||||||||| | ||||| ||||||    
T  12585660 gtccccgtaaacataactcagttggcagggacatgcattgttatatgtaagggccggagttcgaaccccgaacacctcacttattcatcttgaaaaaggt 12585561  T
Q  228 gaattcta 235  Q
    ||||||||    
T  12585560 gaattcta 12585553  T

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Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 20166323 - 20166361
Alignment:
Q  141 tagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  20166323 tagctcagttggcagggacatgcattgttatatgcaggg 20166361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 12820496 - 12820455
Alignment:
Q  139 catagctcagttggcagagac-atgcattgttatatgcaggg 179  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  12820496 catagctcagttggcagagacaatgcattgttatatgcaggg 12820455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 257
Target Start/End: Original strand, 34370917 - 34371046
Alignment:
Q  128 gtccccgtagacatagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggt 227  Q
    |||||| || |||||| || |||| ||||||||||||||||| ||||||||| |   ||||||||| |||  |||| ||||||||  |||||| ||||      
T  34370917 gtccccataaacatagttcggttgacagagacatgcattgttgtatgcaggggtcgaggtttgaatttcgatcaccccacttattctccttgaaaaagaa 34371016  T
Q  228 gaattctaaccgatagtctatctgacaaaa 257  Q
    ||||| || || |||| |||||||| ||||    
T  34371017 gaattttagccaataggctatctgataaaa 34371046  T

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Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 1589247 - 1589207
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  1589247 catagctcagttggcggtgacatgcattgttatatgcaggg 1589207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 4419776 - 4419736
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  4419776 cataactcagttgtcagagacatgcattgttatatgcaggg 4419736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 38657549 - 38657585
Alignment:
Q  143 gctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||| |||||||||||||||||||||||    
T  38657549 gctcagttggcagggacatgcattgttatatgcaggg 38657585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 48512203 - 48512283
Alignment:
Q  139 catagctcagttggcagagaca-tgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttacctt 218  Q
    ||||||||||||||||| |||| |||||||||||||||||||  || |||| | | | |||||||| |||||||| |||||    
T  48512203 catagctcagttggcagggacaatgcattgttatatgcaggggctagggttcgtaccccggacaccccacttattcacctt 48512283  T

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Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 6202613 - 6202704
Alignment:
Q  144 ctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||||||||||| ||||||| ||||| |||| ||||  || |||| ||| | ||||||||  ||||||| | ||||| ||||||||||||||    
T  6202613 ctcagttggcagcgacatgctttgttttatgtaggggctagggttcgaaccccggacaccctacttattcatcttgaaaaaggtgaattcta 6202704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 36045835 - 36045930
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattct 234  Q
    ||||||||| ||| ||| ||||||||||||||||||||||| ||  | || |||   ||||||||||||||| | |  |||| |||||||||||||    
T  36045835 catagctcaattgacagggacatgcattgttatatgcaggggttgagattcgaactccggacacctcacttagtcatattgaaaaaggtgaattct 36045930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 37997931 - 37997840
Alignment:
Q  144 ctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||||||||||| ||||| |||||||||||||||||| |  |||| ||| | | |||||| |||||||| ||||| | || | |||||||||    
T  37997931 ctcagttggcagggacattcattgttatatgcagggtctggggttcgaaccccagacaccccacttattcaccttaaaaaggatgaattcta 37997840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 42432018 - 42432053
Alignment:
Q  144 ctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||||||||||| |||||||||||||||||||||||    
T  42432018 ctcagttggcagggacatgcattgttatatgcaggg 42432053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 9084763 - 9084837
Alignment:
Q  139 catagctcagttggcagagaca-tgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatt 212  Q
    ||||||||||||||||| |||| ||||||||||||||||||| |   | || ||| |||||||||| ||||||||    
T  9084763 catagctcagttggcagggacaatgcattgttatatgcaggggtcgggattcgaacctcggacaccccacttatt 9084837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 24039893 - 24039985
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||||||| ||| ||||||||||||||||||   || |   |||| ||| | || |||||||||||||| ||||||| ||||||||||||||    
T  24039893 catagctcagttgacag-gacatgcattgttatatg---gggtcggggttcgaaccccgaacacctcacttattcaccttgaaaaaggtgaattcta 24039985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 31480274 - 31480316
Alignment:
Q  138 acatagctcagttggcagagaca-tgcattgttatatgcaggg 179  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  31480274 acatagctcagttggcagggacaatgcattgttatatgcaggg 31480316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 43050023 - 43049981
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtt 181  Q
    ||||||||||||| |||  ||||||||||||||||||||||||    
T  43050023 catagctcagttgacaggaacatgcattgttatatgcagggtt 43049981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 232
Target Start/End: Original strand, 49319398 - 49319492
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttg-agaaaggtgaatt 232  Q
    ||||||||||||||||  |||||||||| |||||||||||| |   ||||  || | |||||||| |||||||| |||||| | |||||||||||    
T  49319398 catagctcagttggcatggacatgcattattatatgcaggggtcggggttccaaccccggacaccccacttattcaccttgaaaaaaggtgaatt 49319492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 56950 - 56913
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgca 176  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  56950 cataactcagttggcagggacatgcattgttatatgca 56913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 36008279 - 36008320
Alignment:
Q  139 catagctcagttggcagagaca-tgcattgttatatgcaggg 179  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  36008279 catagctcagttggcagggacaatgcattgttatatgcaggg 36008320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 27921901 - 27921941
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||||||||||||| || |||||||||| ||||||||||||    
T  27921901 catagctcagttggtagggacatgcattattatatgcaggg 27921941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 9768899 - 9768803
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||||||||||| ||||||||||||||||||||||| |   |||| ||| | |||||||| |||||||| ||||||| ||||||||||||||    
T  9768899 catagctcagttggcagggacatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattcta 9768803  T

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Target: chr1; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 9769670 - 9769571
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    ||||||||||||||||| |||||||||| ||||||| |||| ||  |||| ||| | |||||||| |||||||| ||||||| |||||||||||||||||    
T  9769670 catagctcagttggcagggacatgcattattatatgtagggattggggttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattctaacc 9769571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 43020616 - 43020712
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||||||| |||||||| |||||||||| |||||||||||| ||  |||| ||| |||||||||| |||| ||| ||||||| ||| ||||||||||    
T  43020616 catagctcggttggcagggacatgcattattatatgcaggggttggggttcgaacctcggacaccccactcattcaccttgaaaaatgtgaattcta 43020712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 140 - 263
Target Start/End: Original strand, 50575907 - 50576030
Alignment:
Q  140 atagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaaccg 239  Q
    ||||||||||||| || |||||||||||||||||||| ||  |  |||| ||| ||| ||||||||||||||| ||||| | ||||||||||| || |||    
T  50575907 atagctcagttggaagggacatgcattgttatatgcaagggctggggttcgaacctcagacacctcacttattcaccttaaaaaaggtgaattatagccg 50576006  T
Q  240 atagtctatctgacaaaagaaata 263  Q
     ||| |||  |||||||| |||||    
T  50576007 ttaggctacttgacaaaaaaaata 50576030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 13941325 - 13941423
Alignment:
Q  140 atagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    |||| ||||||||||  |||||||||||||||||||||||||   |||| |||  ||||||||| |||||||| | ||||| ||| |||||||||||||    
T  13941325 atagttcagttggcaaggacatgcattgttatatgcagggttcgaggttcgaacttcggacaccccacttattcatcttgaaaaaagtgaattctaacc 13941423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 5684127 - 5684199
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatt 212  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| || ||||| ||| |||||| ||||||||    
T  5684127 catagctcagttggcagagacatgcattattatatgcaggggtta-ggattgaacctcagacaccccacttatt 5684199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 3341826 - 3341730
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||||||||||| |||||||||| ||||||||||||     || | ||| | |||||||| |||||||| ||||||| ||||||||||||||    
T  3341826 catagctcagttggcagggacatgcattattatatgcaggggccggggatcgaaccccggacaccccacttattcaccttgaaaaaggtgaattcta 3341730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 11238118 - 11238022
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||||||||| |||||  |||||||||| |||||||||||| |   |||| ||||| |||||||| |||||||| | ||||| ||||||||||||||    
T  11238118 catagctcagatggcatggacatgcattattatatgcaggggtcggggttcgaatcccggacaccccacttattcatcttgaaaaaggtgaattcta 11238022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 41677067 - 41677187
Alignment:
Q  141 tagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaaccga 240  Q
    ||||||||||||||||||||| |||| |||||||| ||| |   |||| |||   |||||||| |||||||| ||||||| |||||||||||||| ||      
T  41677067 tagctcagttggcagagacattcattattatatgcgggggtcggggttcgaactccggacaccccacttattcaccttgaaaaaggtgaattctagccac 41677166  T
Q  241 tagtctatctgacaaaagaaa 261  Q
    ||| ||| |||| ||||||||    
T  41677167 taggctacctgaaaaaagaaa 41677187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 1721145 - 1721263
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    |||||||||||||| ||  ||||||||||||||||||||||     | || ||| | ||||||||||||||||| ||||| | |||||||||||||| ||    
T  1721145 catagctcagttggtaggaacatgcattgttatatgcaggggccgggtttcgaaccccggacacctcacttattcaccttaaaaaaggtgaattctagcc 1721244  T
Q  239 gatagtctatctgacaaaa 257  Q
    | ||| |||  ||||||||    
T  1721245 gttaggctacttgacaaaa 1721263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 2643905 - 2643787
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    ||||||| |||||||||||||||||||| ||||||||| || |   |||||||| | | |||||| |||||||| ||||| | ||| ||||| |||||||    
T  2643905 catagcttagttggcagagacatgcattattatatgcatgggtcggggtttgaaccccagacaccccacttattcaccttaaaaaatgtgaactctaacc 2643806  T
Q  239 gatagtctatctgacaaaa 257  Q
      ||| ||| |||||||||    
T  2643805 actagactacctgacaaaa 2643787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 47645886 - 47645848
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcag 177  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47645886 catagctcagttggcagagacatgcattgttatatgcag 47645848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 195051 - 195148
Alignment:
Q  141 tagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    ||||||||||||||| |||||||||  ||||||||||||  |  |||| | | | | |||||| |||||||| ||||||| |||||||||||||||||    
T  195051 tagctcagttggcagggacatgcataattatatgcaggggctgaggttcgtaccccagacaccccacttattcaccttgaaaaaggtgaattctaacc 195148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 42801873 - 42801922
Alignment:
Q  128 gtccccgtagacatagctcagttggcagagacatgcattgttatatgcag 177  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  42801873 gtccccgtgaacatagctcagttgacagagacatgcattgttatatgcag 42801922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 48565238 - 48565141
Alignment:
Q  138 acatagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||| |||||||||||| || |  |||||||||||||| ||  || | || ||| |||||||||| ||||||||||| |||| ||||||||||||||    
T  48565238 acatatctcagttggcagggataaacattgttatatgcaaggactaagtttcgaacctcggacaccccacttatttactttgaaaaaggtgaattcta 48565141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 18003821 - 18003861
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  18003821 catagctcagttggcagggacatgcattgttatatgcaggg 18003861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 238
Target Start/End: Complemental strand, 4511627 - 4511516
Alignment:
Q  127 cgtccccgtagacatagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaagg 226  Q
    |||||||||  ||||| |||| ||||||  |||||||||| |||||||||||| |    ||||||||| |||||  | |||||||| ||||| | |||||    
T  4511627 cgtccccgtgaacataactcaattggcaaggacatgcattattatatgcaggggtcggtgtttgaatcccggacgtcccacttattcaccttaaaaaagg 4511528  T
Q  227 tgaattctaacc 238  Q
    ||||||||||||    
T  4511527 tgaattctaacc 4511516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 16182814 - 16182913
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    |||||||||||||||||||||||||||| ||||||| ||||  |  ||||  || | |||||||| |||||||| | ||||| |||  ||||||||||||    
T  16182814 catagctcagttggcagagacatgcattattatatgtaggggctggggttcaaaccccggacaccccacttattcatcttgaaaaatatgaattctaacc 16182913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 18646693 - 18646790
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    |||| |||||||||||  |||||||||||| |||||||||| || |||||||||   || ||||| ||||||||| | |||| |||||||||||||||||    
T  18646693 cataactcagttggcatggacatgcattgtgatatgcaggg-ttgcggtttgaactccgaacacc-cacttattttctttgaaaaaggtgaattctaacc 18646790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 9410417 - 9410320
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaac 237  Q
    ||||| ||||||||||  ||||||||| ||||||||||||||| | | || ||| ||| |||||| |||||||| | ||||| ||||||||||| ||||    
T  9410417 catagttcagttggcaaggacatgcatagttatatgcagggttga-gattcgaacctcagacaccccacttattcatcttgaaaaaggtgaattttaac 9410320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 42908778 - 42908816
Alignment:
Q  141 tagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  42908778 tagctcagttggcagggacatgcattgttatatgcaggg 42908816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 236
Target Start/End: Complemental strand, 4605932 - 4605836
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaa 236  Q
    |||| |||||||| |||||||||||||||||||||||||||   |  |||  || ||| ||||||||| ||||| ||||| | |||||||||||||||    
T  4605932 cataactcagttgacagagacatgcattgttatatgcaggggcca-agttcaaacctcagacacctcatttattcaccttaaaaaaggtgaattctaa 4605836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 12490010 - 12489969
Alignment:
Q  138 acatagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  12490010 acatagctcagttggcaaagacatgcatttttatatgcaggg 12489969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 18976007 - 18976048
Alignment:
Q  138 acatagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  18976007 acatagctcaattgtcagagacatgcattgttatatgcaggg 18976048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 4146339 - 4146379
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||| |||| ||||||||||||||||||||||    
T  4146339 catagctcagttgacagaaacatgcattgttatatgcaggg 4146379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 5862132 - 5862168
Alignment:
Q  138 acatagctcagttggcagagacatgcattgttatatg 174  Q
    |||||||||||||||||| ||||||||||||||||||    
T  5862132 acatagctcagttggcagggacatgcattgttatatg 5862168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 8890126 - 8890082
Alignment:
Q  190 gaatctcggacacctcacttatttaccttgagaaaggtgaattct 234  Q
    ||||| |||| |||||||||||||||||||||||| |||||||||    
T  8890126 gaatcccggatacctcacttatttaccttgagaaatgtgaattct 8890082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 18179333 - 18179373
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  18179333 cataactcagttggcagggacatgcattgttatatgcaggg 18179373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 52961172 - 52961132
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  52961172 catagctcagttggcaaggacatgcattgttatatgcaggg 52961132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 2903112 - 2903021
Alignment:
Q  144 ctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||||||| ||| ||||||||||||||||||||| | |   |||| ||| | || ||||| |||||||| ||||||| ||||| ||||||||    
T  2903112 ctcagttgccagggacatgcattgttatatgcagaggtcggggttcgaaccccgaacaccccacttattcaccttgaaaaaggagaattcta 2903021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 47939289 - 47939246
Alignment:
Q  139 catagctcagttggcagagaca-tgcattgttatatgcagggtt 181  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  47939289 catagctcagttggcagggacaatgcattgttatatgcagggtt 47939246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 9527430 - 9527504
Alignment:
Q  139 catagctcagttggcagagaca-tgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatt 212  Q
    ||||||||||||||||| |||| ||||||||||||||||||| |   |||||||| |  ||||||| ||||||||    
T  9527430 catagctcagttggcagggacaatgcattgttatatgcaggggtcggggtttgaaccctggacaccccacttatt 9527504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 13870172 - 13870098
Alignment:
Q  139 catagctcagttggcagagac-atgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatt 212  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||     |||||||||| |||||||| ||||||||    
T  13870172 catagctcagttggcagggacaatgcattattatatgcaggggccggggtttgaatcccggacaccccacttatt 13870098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 28417368 - 28417330
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcag 177  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  28417368 cataactcagttggcagagacatgcattcttatatgcag 28417330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 51917592 - 51917554
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcag 177  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  51917592 catagctcagttggcatagacatgcattattatatgcag 51917554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 9074002 - 9074043
Alignment:
Q  140 atagctcagttggcagagacatgcattgttatatgcagggtt 181  Q
    |||||||||||| ||| ||||| |||||||||||||||||||    
T  9074002 atagctcagttgacagggacatacattgttatatgcagggtt 9074043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 37262195 - 37262154
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggt 180  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||    
T  37262195 catagttcagttggcagggacatgcgttgttatatgcagggt 37262154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 1576154 - 1576114
Alignment:
Q  196 cggacacctcacttatttaccttgagaaaggtgaattctaa 236  Q
    |||||||| |||||||||||||||| ||| |||||||||||    
T  1576154 cggacaccccacttatttaccttgaaaaaagtgaattctaa 1576114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 7015777 - 7015737
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||| | |||||||||||||||||| ||||    
T  7015777 catagctcagttggctgggacatgcattgttatatgtaggg 7015737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 7906416 - 7906376
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||| |||||||| || |||||||||||||||||||||||    
T  7906416 catagttcagttggtagggacatgcattgttatatgcaggg 7906376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 9004351 - 9004391
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||||| |||||  ||||||||||||||||    
T  9004351 catagctcagttggcagggacatatattgttatatgcaggg 9004391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 218
Target Start/End: Complemental strand, 18923975 - 18923896
Alignment:
Q  139 catagctcagttggcagagaca-tgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttacctt 218  Q
    |||||||||||||| || |||| |||||| |||||||||||||| | |||| ||| |||||||||| ||| |||| |||||    
T  18923975 catagctcagttggtag-gacaatgcattattatatgcagggttcagggttcgaacctcggacaccccacgtattcacctt 18923896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 23758343 - 23758303
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||||||||||||||||| || |||||| ||||||||||||    
T  23758343 catagctcagttggcagaaacgtgcattattatatgcaggg 23758303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 28284040 - 28284008
Alignment:
Q  139 catagctcagttggcagagacatgcattgttat 171  Q
    |||||||||||||||||||||||||||| ||||    
T  28284040 catagctcagttggcagagacatgcattattat 28284008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 33176193 - 33176153
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||||||||||||| || || ||||||||||||||||||||    
T  33176193 catagctcagttggtagggatatgcattgttatatgcaggg 33176153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 41182803 - 41182874
Alignment:
Q  163 cattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||||||||||| |   |||||||| | |||||||| |||||||| || |||| ||||||||||||||    
T  41182803 cattgttatatgcaggggtcggggtttgaaccccggacaccccacttattcactttga-aaaggtgaattcta 41182874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 47141896 - 47141856
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||| |||||||| ||| |||||||||||||||||||||||    
T  47141896 cataactcagttgacagggacatgcattgttatatgcaggg 47141856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 40160740 - 40160836
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||| ||||||| ||||||||||||||||||| |||  |  |||||||| | |||||||| |||||||| ||||| | ||||||||||||||    
T  40160740 catagctcaattggcagggacatgcattgttatatgccggggctggggtttgaaccccggacaccccacttattcacctttaaaaaggtgaattcta 40160836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 4045723 - 4045624
Alignment:
Q  140 atagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaaccg 239  Q
    |||| ||||||| ||| ||||||||||||||||||||||| |   |||| |||  ||||||||| |||||||| | ||||| ||||||||||||||||||    
T  4045723 atagttcagttgacagggacatgcattgttatatgcaggggtcgaggttcgaacttcggacaccccacttattcatcttgaaaaaggtgaattctaaccg 4045624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 28951871 - 28951970
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    |||| ||||||||||||| ||||||||| |||||||||||| | | |||| ||| | || ||||| |||||||| ||||||| ||| |||||||||||||    
T  28951871 cataactcagttggcagatacatgcattattatatgcaggggtcagggttcgaaccccgaacaccccacttattcaccttgaaaaatgtgaattctaacc 28951970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 16874280 - 16874240
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  16874280 catagctcagttggcagggacatgcattgttatatgcaggg 16874240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 24130564 - 24130656
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaat 231  Q
    |||| |||||||||||| ||||| |||||||||||||||||     |||||||| | |||||||| |||||||| ||||||| |||| |||||    
T  24130564 cataactcagttggcagggacatacattgttatatgcaggggacggggtttgaaccccggacaccccacttattcaccttgaaaaagttgaat 24130656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 3993797 - 3993698
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    |||||||||||||  || |||||||||||||||||||||||    ||||||||| | |||||||| || ||||  || |||| || ||||||||||||||    
T  3993797 catagctcagttgagagggacatgcattgttatatgcaggggccgcggtttgaaccccggacaccccatttatgcactttgaaaatggtgaattctaacc 3993698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 4010108 - 4010009
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    |||||||||||||| || |||||||||||||||||||||||    | ||||||| | || ||||| || ||||| ||||||| || | ||||||||||||    
T  4010108 catagctcagttggtagggacatgcattgttatatgcaggggccgcagtttgaaccccgaacaccccatttattcaccttgaaaatgttgaattctaacc 4010009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 3973307 - 3973397
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtga 229  Q
    |||||||||||||| || |||||||||||||||||||||||    || |||||| | |||||||| || ||||| ||||||| || |||||    
T  3973307 catagctcagttggtagggacatgcattgttatatgcaggggccgcgatttgaaccccggacaccccatttattcaccttgaaaatggtga 3973397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 3996569 - 3996479
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtga 229  Q
    |||||||||||||| || |||||||||||||||||||||||    || |||||| | |||||||| || ||||| ||||||| || |||||    
T  3996569 catagctcagttggtagggacatgcattgttatatgcaggggccgcgatttgaaccccggacaccccatttattcaccttgaaaatggtga 3996479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 6054255 - 6054197
Alignment:
Q  199 acacctcacttatttaccttgagaaaggtgaattctaaccgatagtctatctgacaaaa 257  Q
    |||||||||||||| ||||||| |||||||||||||||||  ||| |||| ||||||||    
T  6054255 acacctcacttattcaccttgaaaaaggtgaattctaaccactagactatttgacaaaa 6054197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 12143498 - 12143460
Alignment:
Q  138 acatagctcagttggcagagacatgcattgttatatgca 176  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  12143498 acatagctcagttggcagggacatgcattgttatatgca 12143460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 51017796 - 51017834
Alignment:
Q  140 atagctcagttggcagagacatgcattgttatatgcagg 178  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  51017796 atagctcagttggcagggacatgcattgttatatgcagg 51017834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 19137624 - 19137664
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  19137624 catagctcagttggcaggaacatgcattgttatatgcaggg 19137664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 24160618 - 24160578
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  24160618 cataactcagttggcagagacatgcactgttatatgcaggg 24160578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 30745821 - 30745785
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgc 175  Q
    ||||||||||||||||| |||||||||||||||||||    
T  30745821 catagctcagttggcagggacatgcattgttatatgc 30745785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 17262270 - 17262321
Alignment:
Q  185 ggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaa 236  Q
    |||| ||||| |||||||| |||||||| ||||||| |||||||||||||||    
T  17262270 ggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattctaa 17262321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 232
Target Start/End: Original strand, 19149435 - 19149522
Alignment:
Q  145 tcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaatt 232  Q
    ||||||| |||||||||||||| ||||||| |||||| | |||||||| | | |||||  || |||||||| |||| |||| ||||||    
T  19149435 tcagttgacagagacatgcattattatatgtagggttcagggtttgaaccccagacactccatttatttactttgaaaaagatgaatt 19149522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 23025902 - 23026001
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    ||||||| |||||||||| ||||||||| ||| ||| || | ||  |||||||| | | |||||| |||||||| || || | |||||||||||||||||    
T  23025902 catagctaagttggcagaaacatgcattattaaatgtagcgattgaggtttgaaccccagacaccccacttattcactttaaaaaaggtgaattctaacc 23026001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 174
Target Start/End: Original strand, 33533208 - 33533243
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatg 174  Q
    |||| |||||||||||||||||||||||||||||||    
T  33533208 cataactcagttggcagagacatgcattgttatatg 33533243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 34407175 - 34407084
Alignment:
Q  144 ctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||||||||||| |||||||||| |||||||||||| ||  |||| ||| | | |||||| |||||||| | ||||| || | |||||||||    
T  34407175 ctcagttggcagggacatgcattattatatgcaggggttggggttcgaaccccagacaccccacttattcatcttgaaaatgatgaattcta 34407084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 51412080 - 51412041
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagg 178  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  51412080 catagttcagttggcagggacatgcattgttatatgcagg 51412041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 12236606 - 12236644
Alignment:
Q  141 tagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  12236606 tagctcagttggcagggacatgcattattatatgcaggg 12236644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 235
Target Start/End: Original strand, 16985031 - 16985121
Alignment:
Q  145 tcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||||||||||| |||| ||||||| |||| ||  |||||||| |||| ||||  |||||||| || || | ||| ||||||||||    
T  16985031 tcagttggcagagacattcattattatatgtaggggtttgggtttgaacctcgaacactccacttattcactttaaaaaaagtgaattcta 16985121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 31680737 - 31680854
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    |||||||||||| | || |||||||||||||||| | || | ||  ||||||||  ||||||||| |||||||| ||||| | ||||||||||| || ||    
T  31680737 catagctcagtttgtagggacatgcattgttatacgtagaggttggggtttgaacttcggacaccccacttattcacctt-aaaaaggtgaattttagcc 31680835  T
Q  239 gatagtctatctgacaaaa 257  Q
      ||| |||| ||||||||    
T  31680836 actagactatttgacaaaa 31680854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 218
Target Start/End: Complemental strand, 6951880 - 6951802
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacgg-tttgaatctcggacacctcacttatttacctt 218  Q
    |||| |||||||| ||| |||||||||| |||||||||||| |  ||| |||||| |||||||||| |||||||| |||||    
T  6951880 cataactcagttgacagggacatgcattattatatgcaggggt--cggatttgaacctcggacaccgcacttattcacctt 6951802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 173
Target Start/End: Original strand, 46969008 - 46969037
Alignment:
Q  144 ctcagttggcagagacatgcattgttatat 173  Q
    ||||||||||||||||||||||||||||||    
T  46969008 ctcagttggcagagacatgcattgttatat 46969037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 23237367 - 23237407
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||||| |||||||||| ||||||| ||||    
T  23237367 catagctcagttggcagggacatgcattattatatgtaggg 23237407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 27119293 - 27119377
Alignment:
Q  151 ggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||| ||||||||||||||||||||| | |   |||| ||||| || ||||| ||||||||| |||| | ||||| ||||||||    
T  27119293 ggcagggacatgcattgttatatgcagaggtcggggttcgaatcccgaacaccccacttattttcctttaaaaaggagaattcta 27119377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 40996882 - 40996950
Alignment:
Q  150 tggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttacctt 218  Q
    ||||||||| ||||||||||||||||||||   |  ||| ||||||||| |||| |||||||| |||||    
T  40996882 tggcagagatatgcattgttatatgcagggggcatagttcgaatctcgggcaccccacttattcacctt 40996950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 218
Target Start/End: Complemental strand, 41767859 - 41767779
Alignment:
Q  139 catagctcagttggcagagaca-tgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttacctt 218  Q
    ||||| |||||||||||  ||| ||||||||||||||||||| | |  ||| ||||||||| |||| |||||||| |||||    
T  41767859 catagttcagttggcaggaacaatgcattgttatatgcaggggtcattgttcgaatctcgggcaccccacttattcacctt 41767779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 43774190 - 43774230
Alignment:
Q  140 atagctcagttggcagagaca-tgcattgttatatgcaggg 179  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  43774190 atagctcagttggcagggacaatgcattgttatatgcaggg 43774230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 43911619 - 43911659
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||| |||||||||||||||  ||||||||||||||||    
T  43911619 catagcttagttggcagagacatatattgttatatgcaggg 43911659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 18065259 - 18065358
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    |||||||||||||| |||| ||||||||||||||||||||| ||  |||| ||| | || |||||| ||||||| ||||||| ||| ||||||| |||||    
T  18065259 catagctcagttggtagaggcatgcattgttatatgcaggggttgaggttcgaaccccgaacaccttacttattcaccttgaaaaatgtgaattttaacc 18065358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 36386203 - 36386105
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    |||||||||||||| || || |||||||||||||||||||| |   ||||||||||||||||||| |||||||| || || | |||| ||||||||||||    
T  36386203 catagctcagttggtagggatatgcattgttatatgcaggggtcg-ggtttgaatctcggacaccccacttattcactttaaaaaagatgaattctaacc 36386105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 2057486 - 2057581
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaa 236  Q
    ||||||||||||||||| || || ||||||||||||||||||  |  ||| ||||| |||||||| |||||||| ||||| | |||||||||||||||    
T  2057486 catagctcagttggcagggatatacattgttatatgcagggtcga--gttcgaatcccggacaccccacttattcaccttaaaaaaggtgaattctaa 2057581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 1244574 - 1244670
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||| ||||||||||| ||||| ||||| ||||||||||| |   |||| ||| | |||||||| |||||||| ||||||| ||||||||||||||    
T  1244574 catagttcagttggcagggacatacattgctatatgcaggggtgggggttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattcta 1244670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 29896252 - 29896152
Alignment:
Q  138 acatagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaac 237  Q
    ||||| |||||||| ||| |||||||||||||||||||| |  | | |||| |||||  ||||||| |||||||| ||||||| |||| |||||||||||    
T  29896252 acatatctcagttgacagtgacatgcattgttatatgcatgagtcagggttcgaatcatggacaccccacttattcaccttgaaaaagatgaattctaac 29896153  T
Q  238 c 238  Q
    |    
T  29896152 c 29896152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 16310016 - 16310101
Alignment:
Q  149 ttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||| |||||||||||||||||| |||||| |||  | |||||| ||| |||||  |||||||||||||||| ||||||||||||||    
T  16310016 ttggtagagacatgcattgttatttgcaggatttg-gatttgaacctctgacactccacttatttaccttgaaaaaggtgaattcta 16310101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 44132652 - 44132615
Alignment:
Q  140 atagctcagttggcagagacatgcattgttatatgcag 177  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44132652 atagctcagttggcagagacatgcattgttatatgcag 44132615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 18089734 - 18089830
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||||||||||||||||||||||||||| |  |||||||||   |  ||| ||| | | ||||||||||||||| ||||||| ||| ||||||||||    
T  18089734 catagctcagttggcagagacatgcattatactatgcaggggccagagttcgaaccccagacacctcacttattcaccttgaaaaacgtgaattcta 18089830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 22355088 - 22355184
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||||||||||  ||||||||||||||| ||||||| ||  | || |||   | |||||| |||||||| ||||||  ||||||||||||||    
T  22355088 catagctcagttggcaaggacatgcattgttatgtgcaggggttgagtttcgaactccagacaccccacttattcaccttgcaaaaggtgaattcta 22355184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 34107279 - 34107375
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||||||||||| |||||| ||  |||||||||||| ||  |||| |||   | |||||| |||||||| ||||||| ||| ||||||||||    
T  34107279 catagctcagttggcagggacatgtataattatatgcaggggttgaggttcgaactccagacaccccacttattcaccttgaaaaatgtgaattcta 34107375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 36277792 - 36277752
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  36277792 catagctcagttggcagtgacatgcattgttatatgtaggg 36277752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 179
Target Start/End: Original strand, 10602019 - 10602050
Alignment:
Q  148 gttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||||||||||||||||||||    
T  10602019 gttggcagagacatgcattgttatatgcaggg 10602050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 19352870 - 19352909
Alignment:
Q  138 acatagctcagttggcagagacatgcattgttatatgcag 177  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  19352870 acataactcagttgacagagacatgcattgttatatgcag 19352909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 32288383 - 32288462
Alignment:
Q  141 tagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttga 220  Q
    ||||||||||| |||| ||||||||| ||||||| |||| |   |||| ||| |||||||||| |||||||| |||||||    
T  32288383 tagctcagttgacagaaacatgcattattatatgtagggatcggggttcgaacctcggacaccccacttattcaccttga 32288462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 32944059 - 32944106
Alignment:
Q  131 cccgtagacatagctcagttggcagagacatgcattgttatatgcagg 178  Q
    |||||| |||||||||||||||||  |||||||||| |||||||||||    
T  32944059 cccgtaaacatagctcagttggcatggacatgcattattatatgcagg 32944106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 34376553 - 34376600
Alignment:
Q  145 tcagttggcagagacatgcattgttatatgcagggtttacggtttgaa 192  Q
    ||||||||||| ||||||||||||||||||||||  ||| ||||||||    
T  34376553 tcagttggcagggacatgcattgttatatgcaggagttagggtttgaa 34376600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 6496444 - 6496486
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtt 181  Q
    |||||||||||||| || |||||||||||||||||| ||||||    
T  6496444 catagctcagttggaagggacatgcattgttatatgtagggtt 6496486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 235
Target Start/End: Complemental strand, 29713173 - 29713083
Alignment:
Q  145 tcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||||  ||||| ||||||||||||||||| ||  |||| ||| | | ||||||  ||||||||||||| | |||| |||||||||    
T  29713173 tcagttggcacggacatacattgttatatgcagggattggggttcgaaccccagacaccctacttatttaccttaaaaaagatgaattcta 29713083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 13294475 - 13294434
Alignment:
Q  138 acatagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||||| ||| ||||||| |||||||||||||||||||||||    
T  13294475 acatagttcaattggcagggacatgcattgttatatgcaggg 13294434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 28679879 - 28679920
Alignment:
Q  196 cggacacctcacttatttaccttgagaaaggtgaattctaac 237  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  28679879 cggacacctcacttatttaccttgcaaaaggtaaattctaac 28679920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 32527176 - 32527127
Alignment:
Q  131 cccgtagacatagctcagttggcagagac-atgcattgttatatgcaggg 179  Q
    |||||| |||||||||||||||||| ||| ||||||| ||||||||||||    
T  32527176 cccgtaaacatagctcagttggcagggacaatgcattattatatgcaggg 32527127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 2394997 - 2394945
Alignment:
Q  205 cacttatttaccttgagaaaggtgaattctaaccgatagtctatctgacaaaa 257  Q
    |||||||| ||||||| ||||||||||||||||| |||| || | ||||||||    
T  2394997 cacttattcaccttgaaaaaggtgaattctaaccaatagactttttgacaaaa 2394945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 5772865 - 5772905
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||||  |||||| ||||||||||||||||    
T  5772865 catagctcagttggcaaggacatgtattgttatatgcaggg 5772905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 11133080 - 11133160
Alignment:
Q  139 catagctcagttggcagagaca-tgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttacctt 218  Q
    |||||||||||||| || |||| ||||||||||||||||||| |   |||| ||| | |||||||| |||||||| |||||    
T  11133080 catagctcagttggtagggacaatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcacctt 11133160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 14307780 - 14307744
Alignment:
Q  143 gctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||||||||| || |||||||||||||||||||||||    
T  14307780 gctcagttggtagggacatgcattgttatatgcaggg 14307744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 264
Target Start/End: Original strand, 39118403 - 39118523
Alignment:
Q  144 ctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaaccgatag 243  Q
    ||||||||| || ||||| |||||||||||||||||   |  ||| ||||| || ||||| ||||||||  |||| | ||||| |||||||| ||  |||    
T  39118403 ctcagttggtagggacatacattgttatatgcaggggccagagttcgaatcccgaacaccccacttattctccttaaaaaaggagaattctagccactag 39118502  T
Q  244 tctatctgacaaaagaaatag 264  Q
     ||| ||||||||| ||||||    
T  39118503 actacctgacaaaaaaaatag 39118523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 19477 - 19388
Alignment:
Q  147 agttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaa 236  Q
    ||||||||  |||||||||||||||||| |||| ||  || ||||| ||||||||||||| ||||| || |||| |||||||||||||||    
T  19477 agttggcacggacatgcattgttatatgtaggggttggggattgaacctcggacacctcatttattcactttgaaaaaggtgaattctaa 19388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 139 - 232
Target Start/End: Original strand, 38040271 - 38040363
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaatt 232  Q
    ||||||||||||||||| ||||||||||||||||||||||| |   |||| ||| |||||||| | |||||||| | ||||| |||||||||||    
T  38040271 catagctcagttggcagggacatgcattgttatatgcaggggtcgaggttcgaa-ctcggacatcccacttattcatcttgaaaaaggtgaatt 38040363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 7147109 - 7147013
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||||||||||||| |  |||||||||| |||||||||||| |   |||| ||| ||| ||||||||| |||||||| |||| ||||||||||||||    
T  7147109 catagctcagttggtaaggacatgcattattatatgcaggggtcggggttcgaacctctgacacctcatttatttacattgaaaaaggtgaattcta 7147013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 42781683 - 42781642
Alignment:
Q  140 atagctcagttggcagagacatgcattgttatatgcagggtt 181  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  42781683 atagctcagttggcagggacatgcattgttatatgcagggtt 42781642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 11246584 - 11246544
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  11246584 catagctcagttggcagggacatgcattgttatatgcaggg 11246544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 25660901 - 25660957
Alignment:
Q  123 atatcgtccccgtagacatagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||||||||||||   ||||||||||||||||| || ||||||||||||||||||||    
T  25660901 atatcgtccccgtgagcatagctcagttggcagggatatgcattgttatatgcaggg 25660957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 31556823 - 31556919
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||| || |||| ||||||||||||||||||||||| |    ||| ||| | |||||||| |||||||| ||||||| || |||||||||||    
T  31556823 catagctcacttagcagggacatgcattgttatatgcaggggtcggagttcgaaccccggacaccccacttattcaccttgaaaagggtgaattcta 31556919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 36742057 - 36742017
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  36742057 catagctcagttggcagagacatgaattgttatatgcaggg 36742017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 42553230 - 42553133
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaac 237  Q
    ||||||||||||| ||  ||||||||||||||||||||||| |   |||| ||| | |||||||  |||||||| ||||||| ||| ||||||||||||    
T  42553230 catagctcagttgacaacgacatgcattgttatatgcaggg-tcggggttcgaaccccggacactacacttattcaccttgaaaaatgtgaattctaac 42553133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 6806731 - 6806690
Alignment:
Q  139 catagctcagttggcagagac-atgcattgttatatgcaggg 179  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  6806731 catagctcagttggcagagacaatgcattgttatatgcaggg 6806690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 238
Target Start/End: Original strand, 28768600 - 28768701
Alignment:
Q  137 gacatagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaa 236  Q
    ||||||| |||||||| || |||||||||||| ||||||| || | |  ||| ||||| |  ||| |||||||||  ||||||| |||||||||||||||    
T  28768600 gacatagttcagttggtagggacatgcattgtcatatgcaagggtcagagttcgaatcccaaacatctcacttatccaccttgaaaaaggtgaattctaa 28768699  T
Q  237 cc 238  Q
    ||    
T  28768700 cc 28768701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 31907657 - 31907737
Alignment:
Q  140 atagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttga 220  Q
    |||| |||||| |||| ||||||||||||||||||||||| | | ||||  || |||| ||||| |||||||| |||||||    
T  31907657 ataggtcagtttgcagggacatgcattgttatatgcaggggtcatggttcaaacctcgaacaccccacttattcaccttga 31907737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 35813332 - 35813292
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  35813332 catagctcagttgacagggacatgcattgttatatgcaggg 35813292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 9963421 - 9963500
Alignment:
Q  140 atagctcagttggcagagaca-tgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttacctt 218  Q
    |||||||||||||||| |||| ||||||||||||||||||| ||  |||| |||  |||||| || |||||||| |||||    
T  9963421 atagctcagttggcagggacaatgcattgttatatgcaggggttggggttcgaacttcggaccccccacttattcacctt 9963500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 17557040 - 17557075
Alignment:
Q  144 ctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||||||||||||||||||| ||||    
T  17557040 ctcagttggcagagacatgcattgttatatgtaggg 17557075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 181
Target Start/End: Complemental strand, 38040183 - 38040140
Alignment:
Q  138 acatagctcagttggcagagacatgcattgttatatgcagggtt 181  Q
    |||||| ||||||||||  |||||||||||||||||||||||||    
T  38040183 acatagttcagttggcaaggacatgcattgttatatgcagggtt 38040140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 40250267 - 40250228
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagg 178  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  40250267 catagctcagttggcagtaacatgcattgttatatgcagg 40250228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 225
Target Start/End: Complemental strand, 16969758 - 16969672
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaag 225  Q
    ||||||| |||||| || ||||||||||||| |||| |||| |   ||||||||||||  ||||| |||||||| ||||||| ||||    
T  16969758 catagcttagttggtagggacatgcattgttttatgtagggatcggggtttgaatctcaaacaccccacttattcaccttgaaaaag 16969672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 34325257 - 34325310
Alignment:
Q  126 tcgtccccgtagacatagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||  |||| ||||||||| ||| |||||||||| ||||||||||||    
T  34325257 tcgtccccgtgaacatggctcagttgacagggacatgcattattatatgcaggg 34325310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 20186875 - 20186911
Alignment:
Q  143 gctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  20186875 gctcagttggcagggacatgcattattatatgcaggg 20186911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 22687924 - 22687872
Alignment:
Q  186 gtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    ||||||| | || ||||| |||||||| ||||||| |||||||||||||||||    
T  22687924 gtttgaaccccgaacaccccacttattcaccttgaaaaaggtgaattctaacc 22687872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 31280469 - 31280374
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||||||||||| |||||| |||  |||||||||||   | |||| ||| | || ||||| |||||||  ||||||| ||||||||||||||    
T  31280469 catagctcagttggcagggacatgtattactatatgcaggggccaaggttcgaaccccgaacacc-cacttatccaccttgaaaaaggtgaattcta 31280374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 38230273 - 38230222
Alignment:
Q  160 atgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatt 212  Q
    |||||||||||||||||||| |   |||||||||| |||||||||||||||||    
T  38230273 atgcattgttatatgcaggggtcg-ggtttgaatcccggacacctcacttatt 38230222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 39684262 - 39684342
Alignment:
Q  158 acatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattctaacc 238  Q
    ||||||||||||||||| |||| | | | ||| || | |||||| | |||||||| ||||| | |||||||||||||||||    
T  39684262 acatgcattgttatatgtaggggtcaggatttaaaccccggacatcccacttattcaccttaaaaaaggtgaattctaacc 39684342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 10020559 - 10020463
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||||||| ||| ||||||||||||||||||||||| ||  |||| ||| | || ||| | |||||||| | ||||| ||||||||||||||    
T  10020559 catagctcagttgacagggacatgcattgttatatgcaggggttggggttcgaaccccgaacaacccacttattcatcttgaaaaaggtgaattcta 10020463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 7465471 - 7465511
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  7465471 catagctcagttggcagagacatgcattattatatgcaggg 7465511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 23799310 - 23799378
Alignment:
Q  144 ctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatt 212  Q
    |||||||||||||||||||||||||||||||||||| |   | || ||| |||||||||| ||||||||    
T  23799310 ctcagttggcagagacatgcattgttatatgcaggggtcgggattcgaacctcggacaccccacttatt 23799378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 24427368 - 24427408
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  24427368 cataactcagttggcagagacatgcattgttatatgcaggg 24427408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 35498403 - 35498498
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||| |||||||||||| |||||||||| |||||||||||| ||  ||||  ||  ||||||||| |||||||| || |||| ||||||||||||||    
T  35498403 cataactcagttggcagggacatgcattattatatgcaggggtt-gggttcaaacttcggacaccccacttattcactttgaaaaaggtgaattcta 35498498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 39524713 - 39524788
Alignment:
Q  159 catgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    ||||||||||||||||||||| ||  |||| ||||| || |||||||| |||||||| |||| ||||||||||||||    
T  39524713 catgcattgttatatgcaggggttgaggttcgaatc-cgaacacctcatttatttactttgaaaaaggtgaattcta 39524788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 8147276 - 8147201
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttattta 214  Q
    ||||||||| ||||||| |||||||||||||||||||| || |   |||  ||| |||||||||||||||||||||    
T  8147276 catagctcaattggcagggacatgcattgttatatgcaagggtccgggtacgaacctcggacacctcacttattta 8147201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 35195837 - 35195888
Alignment:
Q  128 gtccccgtagacatagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||||||||  ||||||||||||||||| |||||||||| ||||||||||||    
T  35195837 gtccccgtaagcatagctcagttggcagggacatgcattattatatgcaggg 35195888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 220
Target Start/End: Complemental strand, 7392396 - 7392315
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttga 220  Q
    ||||||||| |||||||  |||||||||||||||||||| | ||  |||||||| | || ||||| |||||||| |||||||    
T  7392396 catagctcaattggcaggaacatgcattgttatatgcagaggttggggtttgaaccccgaacaccccacttattcaccttga 7392315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 11808045 - 11808142
Alignment:
Q  141 tagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttacctt-gagaaaggtgaattctaac 237  Q
    ||||||| |||| || ||||||||||||||||||||||| |   |||| ||| | |||||||| |||||||| ||||| || ||| ||||||||||||    
T  11808045 tagctcaattggtagggacatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcaccttagaaaaacgtgaattctaac 11808142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 17305480 - 17305443
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgca 176  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  17305480 catagctcagttggcagggacatgcattgttatatgca 17305443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 37410571 - 37410498
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatt 212  Q
    |||||||||||||| |  ||||||||||||||||||||||| | | |||| |||   |||||||||||||||||    
T  37410571 catagctcagttggtaaggacatgcattgttatatgcaggggtcaaggttcgaactccggacacctcacttatt 37410498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 37995636 - 37995596
Alignment:
Q  138 acatagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  37995636 acatagctcagttggcagagacatgca-tgttatatgcaggg 37995596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 1649157 - 1649253
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||||||||||||| || || |||||||||| |||||||||   | |||| ||| |  ||||||| |||||||| ||||||| || |||||||||||    
T  1649157 catagctcagttggtagggatatgcattgttttatgcaggggccagggttcgaaccctggacaccccacttattcaccttgaaaatggtgaattcta 1649253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 43635593 - 43635689
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||| ||||||||||||| |||||||||||||||||||| | |   |||| ||| | |||||||| |||||||| |||||   || |||||||||||    
T  43635593 cataactcagttggcagaaacatgcattgttatatgcagcggtcggggttcgaaccccggacaccccacttattcaccttacaaagggtgaattcta 43635689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 218
Target Start/End: Complemental strand, 10474602 - 10474523
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttacctt 218  Q
    ||||| |||||||| |||||||| ||||||||||||||||| |   |||| ||  | ||||||||||||||||| |||||    
T  10474602 catagttcagttggtagagacatacattgttatatgcaggggtcggggttcgacccccggacacctcacttattcacctt 10474523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 26734302 - 26734243
Alignment:
Q  198 gacacctcacttatttaccttgagaaaggtgaattctaaccgatagtctatctgacaaaa 257  Q
    |||||| |||||||| ||||||| |||||||||||||| ||  ||| |||||||||||||    
T  26734302 gacaccccacttattcaccttgaaaaaggtgaattctagccactaggctatctgacaaaa 26734243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 32309229 - 32309142
Alignment:
Q  148 gttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||||||| ||||||||||||||||||||||| |    ||| ||||||| |||||| || ||||| ||||| | ||| ||||||||||    
T  32309229 gttggcagggacatgcattgttatatgcaggggtcggagttcgaatctcagacaccccagttattcaccttaaaaaatgtgaattcta 32309142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 38032956 - 38032905
Alignment:
Q  128 gtccccgtagacatagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||  ||||| |||||||||||| ||||||||||||||||| |||||    
T  38032956 gtccccgtgaacataactcagttggcagggacatgcattgttatatacaggg 38032905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 41139091 - 41139165
Alignment:
Q  139 catagctcagttggcagagaca-tgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatt 212  Q
    ||||||||||||||||| |||| |||||| |||||||||||| |   |||| ||||| ||||||| |||||||||    
T  41139091 catagctcagttggcagggacaatgcattattatatgcaggggtcggggttcgaatcccggacacttcacttatt 41139165  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 19924773 - 19924810
Alignment:
Q  140 atagctcagttggcagagacatgcattgttatatgcag 177  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  19924773 atagctcagttggcagggacatgcattattatatgcag 19924810  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 21285444 - 21285403
Alignment:
Q  139 catagctcagttggcagagaca-tgcattgttatatgcaggg 179  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  21285444 catagctcagttggcagggacaatgcattgttatatgcaggg 21285403  T

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Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 27726470 - 27726421
Alignment:
Q  128 gtccccgtagacatagctcagttggcagagacatgcattgttatatgcag 177  Q
    ||||||||  |||||||||||||||||| |||||||||| ||||| ||||    
T  27726470 gtccccgtgaacatagctcagttggcagggacatgcattattataagcag 27726421  T

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Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 32814832 - 32814905
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatt 212  Q
    |||||||||||||| || |||||||||| |||||||||||| |    ||| ||||| |||||||| ||||||||    
T  32814832 catagctcagttggtagggacatgcattattatatgcaggggtcggagttcgaatcccggacaccccacttatt 32814905  T

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Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 43209405 - 43209446
Alignment:
Q  138 acatagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||| ||||||||||||  ||||||||||||||||||||||    
T  43209405 acataactcagttggcaggaacatgcattgttatatgcaggg 43209446  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 14772425 - 14772385
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||| ||||||||||||||||||||||||||| ||| ||||    
T  14772425 cataactcagttggcagagacatgcattgttacatgtaggg 14772385  T

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Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 15222877 - 15222837
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||| ||||||||||||||||||||||||||| ||| ||||    
T  15222877 cataactcagttggcagagacatgcattgttacatgtaggg 15222837  T

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Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 179
Target Start/End: Complemental strand, 20527519 - 20527479
Alignment:
Q  140 atagctcagttggcagagaca-tgcattgttatatgcaggg 179  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  20527519 atagctcagttggcagggacaatgcattgttatatgcaggg 20527479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 43712403 - 43712307
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||| ||||||||| || ||||||||||||||||| ||||| |   |||| ||| |||||| ||| |||||||   |||||| ||||| ||||||||    
T  43712403 cataactcagttggtagggacatgcattgttatatacaggggtcggggttcgaacctcggataccccacttatcctccttgaaaaaggagaattcta 43712307  T

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Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 45268033 - 45267977
Alignment:
Q  122 catatcgtccccgtagacatagctcagttggcagagacatgcattgttatatgcagg 178  Q
    ||||| ||||||||   |||||||||||||||||||||||  ||| |||||||||||    
T  45268033 catattgtccccgtgagcatagctcagttggcagagacatatattattatatgcagg 45267977  T

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Target: scaffold0712 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 4525 - 4565
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  4525 catagctcagttggcagggacatgcattgttatatgcaggg 4565  T

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Target: scaffold0709 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 4545 - 4585
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  4545 catagctcagttggcagggacatgcattgttatatgcaggg 4585  T

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Target: scaffold0168 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 34123 - 34083
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  34123 catagctcagttggcagggacatgcattgttatatgcaggg 34083  T

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Target: scaffold0219 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 21070 - 21016
Alignment:
Q  123 atatcgtccccgtagacatagctcagttggcagagacatgcattgttatatgcag 177  Q
    |||||||| ||||  |||||||||||||| || ||||||||||||||||||||||    
T  21070 atatcgtctccgtgaacatagctcagttgacaaagacatgcattgttatatgcag 21016  T

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Target: scaffold0126 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 25051 - 25011
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcaggg 179  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  25051 catatctcagttggcagagacatgcaatgttatatgcaggg 25011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 1044 - 1140
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||||||||||||| || |||||||||  ||||||| ||||  |  |||| ||| | | |||||| |||||||| ||||||| ||||||||||||||    
T  1044 catagctcagttggtagggacatgcataattatatgtaggggctggggttcgaaccccagacaccccacttattcaccttgaaaaaggtgaattcta 1140  T

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Target: scaffold0054 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 67166 - 67262
Alignment:
Q  139 catagctcagttggcagagacatgcattgttatatgcagggtttacggtttgaatctcggacacctcacttatttaccttgagaaaggtgaattcta 235  Q
    |||||||||||||| || || ||||||||||||||| ||||  |  |||| ||| |  ||||||| |||||| | ||||||| ||| ||||||||||    
T  67166 catagctcagttgggagggatatgcattgttatatgtaggggctggggttcgaaccctggacaccccacttaatcaccttgaaaaaagtgaattcta 67262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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