View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13049_low_2 (Length: 636)

Name: NF13049_low_2
Description: NF13049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13049_low_2
NF13049_low_2
[»] chr8 (89 HSPs)
chr8 (261-562)||(24501788-24502088)
chr8 (24-259)||(10493214-10493450)
chr8 (313-559)||(42938095-42938340)
chr8 (313-562)||(2704794-2705042)
chr8 (321-562)||(26374405-26374645)
chr8 (313-562)||(42937336-42937582)
chr8 (313-562)||(42735252-42735500)
chr8 (313-562)||(5576595-5576844)
chr8 (321-562)||(7506874-7507114)
chr8 (313-543)||(23115162-23115391)
chr8 (313-558)||(10392217-10392460)
chr8 (313-562)||(41479080-41479318)
chr8 (313-542)||(14782129-14782358)
chr8 (313-542)||(44725804-44726033)
chr8 (313-542)||(9288451-9288680)
chr8 (313-542)||(19717875-19718104)
chr8 (313-562)||(43959641-43959878)
chr8 (313-542)||(18958721-18958950)
chr8 (313-542)||(39467462-39467691)
chr8 (256-530)||(43166696-43166970)
chr8 (313-542)||(4403090-4403319)
chr8 (314-544)||(10295372-10295603)
chr8 (313-542)||(7466318-7466537)
chr8 (321-542)||(26856057-26856279)
chr8 (313-539)||(18305968-18306184)
chr8 (313-542)||(32497508-32497727)
chr8 (313-460)||(32711358-32711505)
chr8 (265-542)||(39189810-39190084)
chr8 (256-386)||(42735469-42735599)
chr8 (313-471)||(16362179-16362337)
chr8 (261-386)||(23115360-23115485)
chr8 (313-542)||(42305789-42306008)
chr8 (313-460)||(31623678-31623825)
chr8 (313-460)||(4031334-4031481)
chr8 (264-386)||(41478989-41479111)
chr8 (261-386)||(32711474-32711599)
chr8 (262-345)||(7507132-7507215)
chr8 (261-386)||(2705011-2705136)
chr8 (261-386)||(5576813-5576938)
chr8 (265-386)||(14782327-14782448)
chr8 (265-386)||(44726002-44726123)
chr8 (260-359)||(24214811-24214909)
chr8 (409-543)||(4950009-4950143)
chr8 (256-345)||(26373688-26373778)
chr8 (265-386)||(26374622-26374741)
chr8 (254-386)||(4031450-4031582)
chr8 (262-381)||(42938314-42938433)
chr8 (264-386)||(43959549-43959672)
chr8 (256-386)||(18958919-18959049)
chr8 (265-383)||(32497376-32497494)
chr8 (255-386)||(42305977-42306108)
chr8 (262-337)||(42937250-42937325)
chr8 (265-386)||(7466228-7466349)
chr8 (265-386)||(19718073-19718194)
chr8 (267-386)||(39467660-39467778)
chr8 (265-386)||(16362089-16362210)
chr8 (265-386)||(10295573-10295694)
chr8 (265-386)||(18306153-18306274)
chr8 (265-386)||(31623588-31623709)
chr8 (256-384)||(4402991-4403119)
chr8 (410-517)||(13478269-13478376)
chr8 (408-516)||(8410416-8410526)
chr8 (261-339)||(8543408-8543487)
chr8 (255-386)||(9288649-9288773)
chr8 (265-386)||(26855961-26856080)
chr8 (265-375)||(43308482-43308592)
chr8 (313-386)||(32497466-32497539)
chr8 (407-542)||(37857196-37857321)
chr8 (313-375)||(26374549-26374611)
chr8 (314-375)||(7507018-7507079)
chr8 (473-542)||(9770434-9770503)
chr8 (258-386)||(9771009-9771135)
chr8 (112-176)||(10493748-10493812)
chr8 (313-375)||(10295500-10295562)
chr8 (261-339)||(29260283-29260361)
chr8 (267-379)||(29930843-29930956)
chr8 (484-525)||(32711305-32711346)
chr8 (260-337)||(35142040-35142117)
chr8 (286-375)||(37857117-37857206)
chr8 (313-381)||(8543506-8543574)
chr8 (260-339)||(14061544-14061623)
chr8 (261-339)||(1606020-1606098)
chr8 (350-388)||(4302808-4302846)
chr8 (313-383)||(9770970-9771040)
chr8 (262-339)||(2112791-2112868)
chr8 (353-386)||(24214825-24214858)
chr8 (313-386)||(41069927-41070000)
chr8 (261-337)||(42366049-42366125)
chr8 (287-339)||(43605371-43605423)
[»] chr5 (65 HSPs)
chr5 (261-562)||(7016714-7017014)
chr5 (313-559)||(21147050-21147294)
chr5 (313-562)||(33656017-33656266)
chr5 (313-562)||(5272894-5273142)
chr5 (313-562)||(27458925-27459172)
chr5 (313-542)||(1152097-1152326)
chr5 (313-561)||(139256-139504)
chr5 (313-562)||(32157869-32158121)
chr5 (313-542)||(14000099-14000328)
chr5 (313-544)||(4550249-4550480)
chr5 (313-542)||(13925914-13926143)
chr5 (355-517)||(849172-849334)
chr5 (313-502)||(6460775-6460964)
chr5 (330-530)||(7947579-7947779)
chr5 (313-542)||(4240456-4240675)
chr5 (313-542)||(5949092-5949310)
chr5 (313-542)||(40013706-40013925)
chr5 (325-497)||(14465266-14465438)
chr5 (313-542)||(22746280-22746501)
chr5 (317-471)||(1461203-1461357)
chr5 (261-386)||(21146956-21147081)
chr5 (313-460)||(37013897-37014044)
chr5 (262-386)||(33656235-33656359)
chr5 (357-542)||(39852372-39852557)
chr5 (263-390)||(16894048-16894174)
chr5 (324-543)||(9689654-9689870)
chr5 (261-386)||(32158090-32158216)
chr5 (258-386)||(37013800-37013928)
chr5 (251-386)||(27459141-27459276)
chr5 (313-543)||(9220710-9220930)
chr5 (265-386)||(4550449-4550570)
chr5 (265-386)||(14000297-14000418)
chr5 (262-386)||(6460682-6460806)
chr5 (261-343)||(43319135-43319218)
chr5 (264-381)||(5273158-5273276)
chr5 (264-386)||(9689553-9689674)
chr5 (265-386)||(4240644-4240765)
chr5 (265-386)||(40013894-40014012)
chr5 (265-386)||(1152295-1152416)
chr5 (256-386)||(5948993-5949123)
chr5 (265-374)||(7948521-7948630)
chr5 (269-386)||(13925828-13925945)
chr5 (265-386)||(22746190-22746311)
chr5 (290-386)||(139191-139287)
chr5 (303-386)||(14465419-14465501)
chr5 (313-386)||(5273111-5273184)
chr5 (262-332)||(27786210-27786280)
chr5 (284-341)||(26795638-26795695)
chr5 (307-363)||(849166-849222)
chr5 (287-343)||(1511587-1511643)
chr5 (284-341)||(26806702-26806759)
chr5 (312-364)||(9220837-9220889)
chr5 (261-339)||(28594449-28594528)
chr5 (284-341)||(26806581-26806638)
chr5 (315-375)||(39852372-39852432)
chr5 (313-375)||(1461257-1461319)
chr5 (313-375)||(7947692-7947754)
chr5 (313-375)||(14465346-14465408)
chr5 (261-339)||(40410589-40410667)
chr5 (284-341)||(2276210-2276267)
chr5 (323-372)||(9689693-9689742)
chr5 (284-337)||(26795521-26795574)
chr5 (261-382)||(39753434-39753555)
chr5 (301-341)||(378272-378312)
chr5 (287-339)||(17518453-17518505)
[»] scaffold0113 (1 HSPs)
scaffold0113 (261-562)||(38872-39171)
[»] chr7 (130 HSPs)
chr7 (262-562)||(39219352-39219651)
chr7 (313-562)||(40996624-40996872)
chr7 (313-562)||(43581065-43581313)
chr7 (313-562)||(973168-973416)
chr7 (313-562)||(30440780-30441028)
chr7 (313-559)||(7719238-7719483)
chr7 (313-562)||(18914710-18914958)
chr7 (313-562)||(34695257-34695505)
chr7 (313-562)||(47914250-47914498)
chr7 (313-559)||(44343374-44343619)
chr7 (313-562)||(47879152-47879400)
chr7 (313-544)||(12893392-12893623)
chr7 (313-562)||(34008996-34009245)
chr7 (313-562)||(20275238-20275486)
chr7 (349-543)||(7718355-7718549)
chr7 (313-542)||(23101275-23101504)
chr7 (313-542)||(10068443-10068673)
chr7 (313-542)||(28342324-28342553)
chr7 (313-542)||(39784076-39784305)
chr7 (313-542)||(3022903-3023132)
chr7 (313-530)||(29614770-29614987)
chr7 (321-542)||(18838374-18838595)
chr7 (313-559)||(32142895-32143142)
chr7 (313-562)||(7113440-7113684)
chr7 (313-542)||(9882231-9882459)
chr7 (313-542)||(28034799-28035028)
chr7 (313-542)||(33382614-33382843)
chr7 (313-509)||(12963678-12963874)
chr7 (253-507)||(43679351-43679592)
chr7 (265-542)||(509585-509852)
chr7 (313-542)||(7993119-7993348)
chr7 (313-541)||(12740350-12740577)
chr7 (313-542)||(3797061-3797280)
chr7 (329-542)||(8675326-8675539)
chr7 (313-541)||(19251516-19251734)
chr7 (321-471)||(44121965-44122115)
chr7 (280-493)||(10676463-10676676)
chr7 (261-386)||(34695121-34695246)
chr7 (313-471)||(37327904-37328062)
chr7 (261-386)||(44343588-44343713)
chr7 (313-502)||(32883759-32883948)
chr7 (327-542)||(9179871-9180076)
chr7 (267-471)||(29585446-29585649)
chr7 (313-518)||(727496-727692)
chr7 (261-386)||(30440686-30440811)
chr7 (313-542)||(40460711-40460930)
chr7 (313-542)||(41827291-41827510)
chr7 (313-542)||(44256760-44256989)
chr7 (313-469)||(31638859-31639015)
chr7 (313-473)||(46405494-46405654)
chr7 (313-460)||(17001099-17001246)
chr7 (261-379)||(18914934-18915052)
chr7 (262-386)||(43581282-43581406)
chr7 (265-460)||(47066631-47066828)
chr7 (253-383)||(29892998-29893128)
chr7 (408-542)||(43187351-43187485)
chr7 (261-386)||(8078285-8078410)
chr7 (261-386)||(12893298-12893423)
chr7 (264-381)||(20275460-20275577)
chr7 (313-471)||(39028074-39028232)
chr7 (262-386)||(47879059-47879183)
chr7 (262-386)||(47914157-47914281)
chr7 (263-376)||(32143121-32143235)
chr7 (262-386)||(973074-973199)
chr7 (265-386)||(29614956-29615077)
chr7 (262-379)||(31638766-31638883)
chr7 (254-386)||(28342223-28342355)
chr7 (264-379)||(727405-727520)
chr7 (261-381)||(34008905-34009022)
chr7 (325-451)||(33892335-33892461)
chr7 (262-527)||(44623295-44623548)
chr7 (256-386)||(9882428-9882558)
chr7 (261-386)||(40996841-40996967)
chr7 (265-386)||(23101185-23101306)
chr7 (265-386)||(39783986-39784107)
chr7 (265-386)||(48117785-48117906)
chr7 (411-542)||(19810874-19810995)
chr7 (313-502)||(25805669-25805858)
chr7 (255-386)||(43187535-43187666)
chr7 (407-560)||(1470213-1470362)
chr7 (256-386)||(10068344-10068474)
chr7 (256-386)||(17001215-17001345)
chr7 (265-386)||(7993029-7993150)
chr7 (265-386)||(37327814-37327935)
chr7 (278-386)||(19251439-19251547)
chr7 (422-542)||(37972861-37972981)
chr7 (265-379)||(7719459-7719574)
chr7 (313-383)||(48117746-48117816)
chr7 (265-386)||(12963589-12963709)
chr7 (267-386)||(46405623-46405742)
chr7 (256-386)||(18838267-18838397)
chr7 (260-386)||(39027979-39028105)
chr7 (265-383)||(41827201-41827319)
chr7 (265-386)||(33382524-33382645)
chr7 (256-386)||(3797249-3797379)
chr7 (261-381)||(7113343-7113466)
chr7 (265-383)||(32883668-32883787)
chr7 (265-383)||(3022813-3022931)
chr7 (256-346)||(21067760-21067850)
chr7 (288-386)||(40460899-40460997)
chr7 (313-381)||(34695215-34695283)
chr7 (269-383)||(28035000-28035114)
chr7 (261-320)||(31401586-31401645)
chr7 (321-390)||(8078387-8078457)
chr7 (261-331)||(9179766-9179836)
chr7 (260-341)||(37973011-37973092)
chr7 (285-341)||(3634236-3634292)
chr7 (278-386)||(12740273-12740381)
chr7 (510-562)||(31639031-31639082)
chr7 (265-337)||(33892492-33892564)
chr7 (313-375)||(7718481-7718543)
chr7 (442-520)||(10617024-10617102)
chr7 (313-361)||(43187518-43187566)
chr7 (267-383)||(44256961-44257077)
chr7 (407-462)||(447854-447909)
chr7 (313-375)||(8675352-8675414)
chr7 (265-386)||(44122092-44122214)
chr7 (320-376)||(1470392-1470448)
chr7 (313-381)||(10616926-10616993)
chr7 (286-341)||(46037355-46037410)
chr7 (313-371)||(9179899-9179957)
chr7 (313-375)||(18838408-18838470)
chr7 (313-375)||(33892369-33892431)
chr7 (350-388)||(40097140-40097178)
chr7 (313-375)||(44122019-44122081)
chr7 (288-341)||(34115478-34115531)
chr7 (255-339)||(151851-151935)
chr7 (289-341)||(21066809-21066861)
chr7 (287-339)||(27418649-27418701)
chr7 (260-340)||(48399725-48399805)
[»] chr6 (42 HSPs)
chr6 (313-562)||(6197453-6197701)
chr6 (313-562)||(1391606-1391854)
chr6 (313-562)||(2300714-2300961)
chr6 (313-562)||(28002647-28002895)
chr6 (313-542)||(31895678-31895907)
chr6 (315-544)||(29076582-29076812)
chr6 (315-544)||(29111555-29111786)
chr6 (313-530)||(34773391-34773608)
chr6 (313-542)||(14262427-14262656)
chr6 (261-530)||(34759056-34759328)
chr6 (313-542)||(7051827-7052056)
chr6 (265-530)||(7497010-7497274)
chr6 (313-542)||(30385063-30385280)
chr6 (261-386)||(2300930-2301055)
chr6 (261-386)||(6197670-6197795)
chr6 (262-381)||(1391513-1391632)
chr6 (265-386)||(31895588-31895709)
chr6 (255-386)||(29076479-29076611)
chr6 (255-386)||(29111452-29111584)
chr6 (265-386)||(34773301-34773422)
chr6 (254-386)||(14262625-14262757)
chr6 (261-386)||(7051733-7051858)
chr6 (407-542)||(31067569-31067694)
chr6 (322-502)||(656957-657122)
chr6 (289-381)||(28002581-28002673)
chr6 (301-379)||(3848092-3848170)
chr6 (488-561)||(2238668-2238741)
chr6 (422-542)||(4200431-4200541)
chr6 (313-451)||(3848194-3848330)
chr6 (284-382)||(7100186-7100284)
chr6 (284-382)||(8794346-8794444)
chr6 (284-341)||(5957148-5957205)
chr6 (284-382)||(708937-709035)
chr6 (313-373)||(656989-657049)
chr6 (496-536)||(11113733-11113773)
chr6 (287-341)||(31609697-31609751)
chr6 (288-359)||(656879-656950)
chr6 (509-543)||(657114-657148)
chr6 (350-388)||(10644014-10644052)
chr6 (350-388)||(30877898-30877936)
chr6 (288-341)||(8636699-8636752)
chr6 (354-386)||(30385249-30385281)
[»] chr2 (80 HSPs)
chr2 (261-562)||(9120058-9120358)
chr2 (313-562)||(16269675-16269923)
chr2 (313-562)||(20605220-20605468)
chr2 (313-562)||(31170602-31170850)
chr2 (313-562)||(24776339-24776586)
chr2 (313-562)||(14198555-14198803)
chr2 (313-562)||(12407364-12407612)
chr2 (313-562)||(43847630-43847878)
chr2 (313-561)||(5093025-5093273)
chr2 (313-562)||(305443-305691)
chr2 (313-562)||(35317046-35317294)
chr2 (313-562)||(22551741-22551989)
chr2 (313-562)||(44765759-44765998)
chr2 (313-562)||(32125234-32125486)
chr2 (313-542)||(28844539-28844768)
chr2 (313-562)||(1789426-1789676)
chr2 (313-542)||(33135607-33135835)
chr2 (322-542)||(25288152-25288372)
chr2 (313-542)||(10657390-10657619)
chr2 (327-542)||(18177265-18177480)
chr2 (313-542)||(26788768-26788996)
chr2 (313-542)||(28740290-28740509)
chr2 (313-471)||(7026588-7026746)
chr2 (253-386)||(24776237-24776370)
chr2 (256-471)||(378864-379079)
chr2 (260-386)||(16269580-16269706)
chr2 (261-386)||(12407270-12407395)
chr2 (261-386)||(20605042-20605167)
chr2 (261-386)||(31170819-31170944)
chr2 (263-379)||(14198779-14198894)
chr2 (313-542)||(10125297-10125518)
chr2 (263-386)||(44765667-44765790)
chr2 (313-530)||(13833441-13833648)
chr2 (313-562)||(26601191-26601426)
chr2 (262-386)||(22551958-22552082)
chr2 (313-460)||(3574831-3574978)
chr2 (260-386)||(35316951-35317077)
chr2 (255-386)||(26788668-26788799)
chr2 (261-386)||(1789332-1789457)
chr2 (313-444)||(215320-215451)
chr2 (261-381)||(305665-305787)
chr2 (313-542)||(3463655-3463875)
chr2 (261-386)||(26601395-26601520)
chr2 (265-386)||(28844449-28844570)
chr2 (313-460)||(6224626-6224774)
chr2 (273-379)||(32125152-32125258)
chr2 (265-386)||(215420-215541)
chr2 (266-386)||(28740478-28740598)
chr2 (255-386)||(33135507-33135638)
chr2 (419-542)||(43078653-43078776)
chr2 (265-386)||(7026497-7026619)
chr2 (261-381)||(19144914-19145033)
chr2 (261-386)||(43847536-43847661)
chr2 (256-381)||(3463556-3463681)
chr2 (313-386)||(20605136-20605209)
chr2 (279-386)||(10125487-10125594)
chr2 (265-383)||(13833620-13833738)
chr2 (265-350)||(43078569-43078654)
chr2 (279-383)||(3574755-3574859)
chr2 (256-381)||(10657291-10657416)
chr2 (266-386)||(5093242-5093352)
chr2 (313-386)||(20605178-20605251)
chr2 (313-383)||(19145007-19145080)
chr2 (313-386)||(8172120-8172193)
chr2 (258-341)||(3858191-3858274)
chr2 (287-386)||(8172053-8172151)
chr2 (314-361)||(8172163-8172210)
chr2 (262-341)||(18176474-18176553)
chr2 (284-341)||(2288483-2288538)
chr2 (300-386)||(6224743-6224829)
chr2 (313-375)||(18177293-18177355)
chr2 (265-327)||(43825085-43825147)
chr2 (407-451)||(21370638-21370682)
chr2 (350-388)||(11534881-11534919)
chr2 (287-337)||(21987316-21987366)
chr2 (350-388)||(34028933-34028971)
chr2 (473-542)||(215235-215303)
chr2 (481-530)||(6224576-6224625)
chr2 (262-339)||(29940945-29941022)
chr2 (287-339)||(24193574-24193626)
[»] chr3 (146 HSPs)
chr3 (313-562)||(20498191-20498439)
chr3 (313-562)||(996062-996310)
chr3 (313-562)||(10139122-10139370)
chr3 (313-562)||(19253809-19254057)
chr3 (313-559)||(3999624-3999869)
chr3 (260-531)||(33996547-33996810)
chr3 (313-562)||(6589546-6589795)
chr3 (313-562)||(29448833-29449082)
chr3 (313-562)||(37820453-37820701)
chr3 (313-562)||(35337717-35337963)
chr3 (313-539)||(33807796-33808023)
chr3 (313-562)||(3206181-3206420)
chr3 (313-562)||(44762011-44762261)
chr3 (313-562)||(25418348-25418595)
chr3 (313-562)||(40246826-40247073)
chr3 (313-558)||(54625574-54625818)
chr3 (265-542)||(17946223-17946499)
chr3 (313-542)||(44906508-44906737)
chr3 (313-562)||(52114510-52114759)
chr3 (329-562)||(53929104-53929336)
chr3 (313-542)||(36674125-36674354)
chr3 (324-542)||(6035048-6035266)
chr3 (313-542)||(34484025-34484254)
chr3 (313-530)||(40897126-40897343)
chr3 (265-542)||(52810312-52810589)
chr3 (313-542)||(11431508-11431737)
chr3 (312-529)||(29029987-29030203)
chr3 (313-522)||(51699495-51699703)
chr3 (256-542)||(10728646-10728922)
chr3 (313-542)||(54628825-54629055)
chr3 (329-542)||(48379155-48379368)
chr3 (313-542)||(51737721-51737951)
chr3 (313-542)||(52617966-52618189)
chr3 (313-542)||(18749594-18749823)
chr3 (321-542)||(32580167-32580387)
chr3 (313-539)||(31646284-31646508)
chr3 (313-542)||(26107242-26107472)
chr3 (313-542)||(50903235-50903467)
chr3 (313-502)||(22057743-22057933)
chr3 (408-543)||(5825139-5825274)
chr3 (313-483)||(1440006-1440177)
chr3 (426-562)||(1439869-1440005)
chr3 (264-561)||(27899277-27899560)
chr3 (314-526)||(20832975-20833187)
chr3 (261-386)||(3206389-3206514)
chr3 (313-471)||(10660517-10660675)
chr3 (313-460)||(23753463-23753610)
chr3 (261-386)||(996279-996403)
chr3 (449-562)||(6131210-6131321)
chr3 (261-386)||(19253715-19253840)
chr3 (321-530)||(39038030-39038229)
chr3 (321-542)||(37454851-37455062)
chr3 (313-542)||(50762055-50762274)
chr3 (261-381)||(10139344-10139464)
chr3 (262-386)||(37820670-37820794)
chr3 (313-542)||(44276371-44276586)
chr3 (261-386)||(20498098-20498222)
chr3 (261-343)||(12734076-12734158)
chr3 (265-386)||(10660427-10660548)
chr3 (261-381)||(35337622-35337743)
chr3 (265-386)||(36674323-36674444)
chr3 (261-386)||(40246732-40246857)
chr3 (403-562)||(52079999-52080142)
chr3 (265-379)||(6589455-6589570)
chr3 (313-519)||(6975731-6975924)
chr3 (265-386)||(1440146-1440265)
chr3 (265-386)||(23753579-23753700)
chr3 (265-386)||(27240436-27240557)
chr3 (265-386)||(29029898-29030019)
chr3 (313-502)||(55235168-55235356)
chr3 (282-386)||(44762230-44762334)
chr3 (263-386)||(18749460-18749583)
chr3 (267-386)||(44906706-44906825)
chr3 (313-379)||(18749552-18749618)
chr3 (256-386)||(31646477-31646607)
chr3 (256-386)||(50903436-50903566)
chr3 (265-386)||(11431418-11431539)
chr3 (265-386)||(50762243-50762364)
chr3 (261-381)||(29449056-29449178)
chr3 (261-386)||(33807992-33808120)
chr3 (261-386)||(51699672-51699797)
chr3 (261-386)||(22057651-22057774)
chr3 (278-386)||(54628748-54628856)
chr3 (261-386)||(25418254-25418379)
chr3 (313-431)||(12103611-12103729)
chr3 (265-542)||(39842489-39842743)
chr3 (260-337)||(52114417-52114494)
chr3 (265-386)||(52618158-52618279)
chr3 (262-379)||(54625481-54625598)
chr3 (260-372)||(539588-539700)
chr3 (283-386)||(2024117-2024220)
chr3 (313-372)||(27240408-27240467)
chr3 (313-390)||(6131318-6131395)
chr3 (262-367)||(38772266-38772371)
chr3 (265-375)||(15493934-15494045)
chr3 (484-539)||(33807678-33807733)
chr3 (265-386)||(40897035-40897157)
chr3 (265-386)||(51737920-51738039)
chr3 (267-386)||(6975643-6975762)
chr3 (355-462)||(539479-539586)
chr3 (288-386)||(12103545-12103642)
chr3 (261-315)||(16010751-16010805)
chr3 (313-386)||(44276329-44276402)
chr3 (305-381)||(6131411-6131486)
chr3 (336-379)||(15493018-15493061)
chr3 (265-386)||(20832887-20833005)
chr3 (253-364)||(26107141-26107251)
chr3 (284-341)||(10105019-10105076)
chr3 (284-341)||(10216166-10216223)
chr3 (284-341)||(10225795-10225852)
chr3 (301-458)||(23535890-23536047)
chr3 (265-386)||(48379050-48379170)
chr3 (262-386)||(55235076-55235199)
chr3 (313-384)||(6131366-6131437)
chr3 (287-341)||(28146264-28146318)
chr3 (313-375)||(53929248-53929310)
chr3 (261-338)||(6035293-6035370)
chr3 (473-542)||(45862983-45863052)
chr3 (302-359)||(53929339-53929395)
chr3 (322-386)||(44276296-44276360)
chr3 (260-359)||(52079880-52079971)
chr3 (313-375)||(539524-539586)
chr3 (464-542)||(15492862-15492940)
chr3 (261-339)||(19552155-19552233)
chr3 (253-339)||(36055014-36055100)
chr3 (313-375)||(37454885-37454947)
chr3 (313-371)||(39038064-39038122)
chr3 (284-341)||(10225674-10225731)
chr3 (284-337)||(45215410-45215463)
chr3 (262-339)||(50900454-50900531)
chr3 (313-359)||(5825042-5825088)
chr3 (313-375)||(20833016-20833078)
chr3 (261-339)||(26555813-26555891)
chr3 (350-388)||(27593198-27593236)
chr3 (313-375)||(32580201-32580262)
chr3 (350-388)||(36786017-36786055)
chr3 (284-341)||(44701565-44701623)
chr3 (287-341)||(46749276-46749330)
chr3 (313-375)||(48379181-48379243)
chr3 (284-337)||(10104902-10104955)
chr3 (284-337)||(10216049-10216102)
chr3 (349-386)||(34484223-34484260)
chr3 (474-529)||(12103733-12103789)
chr3 (287-339)||(30588864-30588916)
chr3 (287-339)||(38682451-38682503)
chr3 (260-324)||(45926971-45927035)
[»] scaffold0400 (2 HSPs)
scaffold0400 (313-562)||(15009-15257)
scaffold0400 (256-386)||(15226-15353)
[»] scaffold0365 (2 HSPs)
scaffold0365 (313-562)||(15652-15900)
scaffold0365 (256-386)||(15869-15996)
[»] scaffold0004 (1 HSPs)
scaffold0004 (262-560)||(102026-102324)
[»] chr4 (133 HSPs)
chr4 (313-562)||(25331113-25331361)
chr4 (313-562)||(41881056-41881307)
chr4 (313-562)||(12112927-12113176)
chr4 (313-562)||(7007356-7007605)
chr4 (313-562)||(55302825-55303077)
chr4 (313-562)||(32950811-32951060)
chr4 (313-560)||(1044791-1045035)
chr4 (313-562)||(22201997-22202245)
chr4 (313-561)||(39479332-39479581)
chr4 (313-547)||(1112875-1113109)
chr4 (262-508)||(25445983-25446227)
chr4 (313-562)||(34228559-34228806)
chr4 (313-562)||(37046425-37046676)
chr4 (313-562)||(30009653-30009901)
chr4 (313-542)||(5441386-5441615)
chr4 (313-542)||(27768038-27768267)
chr4 (313-562)||(46635624-46635866)
chr4 (313-542)||(54341126-54341355)
chr4 (313-561)||(31314719-31314952)
chr4 (313-562)||(24130957-24131196)
chr4 (321-562)||(3436583-3436823)
chr4 (254-542)||(23987137-23987415)
chr4 (313-507)||(28541680-28541874)
chr4 (313-542)||(51320903-51321132)
chr4 (355-562)||(42786708-42786913)
chr4 (313-542)||(37828397-37828626)
chr4 (313-542)||(54853463-54853692)
chr4 (313-544)||(9163058-9163281)
chr4 (403-560)||(41320882-41321038)
chr4 (313-542)||(32322073-32322302)
chr4 (313-542)||(37915809-37916038)
chr4 (313-516)||(19740929-19741132)
chr4 (313-562)||(40537136-40537369)
chr4 (296-528)||(44770862-44771095)
chr4 (313-562)||(53275821-53276069)
chr4 (266-493)||(28370859-28371086)
chr4 (313-493)||(23464937-23465117)
chr4 (313-544)||(30967302-30967523)
chr4 (313-507)||(7249795-7249996)
chr4 (288-543)||(39307247-39307502)
chr4 (313-480)||(25504696-25504863)
chr4 (405-547)||(27454068-27454210)
chr4 (301-530)||(36479249-36479467)
chr4 (262-386)||(24131165-24131289)
chr4 (313-460)||(49834890-49835037)
chr4 (313-530)||(12913206-12913413)
chr4 (261-386)||(22201903-22202028)
chr4 (261-381)||(1044698-1044817)
chr4 (313-473)||(29649731-29649891)
chr4 (256-386)||(41881276-41881407)
chr4 (289-460)||(32684065-32684235)
chr4 (321-530)||(41725115-41725321)
chr4 (261-386)||(25331019-25331144)
chr4 (261-386)||(40537338-40537463)
chr4 (262-386)||(28541587-28541711)
chr4 (261-375)||(42786655-42786770)
chr4 (407-542)||(48261203-48261338)
chr4 (261-383)||(37915673-37915795)
chr4 (262-387)||(7249964-7250090)
chr4 (271-381)||(32951034-32951144)
chr4 (265-386)||(5441296-5441417)
chr4 (262-386)||(37046645-37046769)
chr4 (261-381)||(39479555-39479675)
chr4 (313-542)||(49501514-49501735)
chr4 (313-542)||(49507579-49507800)
chr4 (264-386)||(31314921-31315043)
chr4 (265-386)||(27767948-27768069)
chr4 (265-386)||(30967492-30967613)
chr4 (313-451)||(50018233-50018371)
chr4 (265-386)||(54341036-54341157)
chr4 (262-386)||(25504832-25504955)
chr4 (263-386)||(46635835-46635959)
chr4 (256-386)||(20021227-20021357)
chr4 (261-379)||(30009877-30009995)
chr4 (266-386)||(49835006-49835126)
chr4 (281-386)||(34228776-34228880)
chr4 (262-386)||(55302732-55302856)
chr4 (443-542)||(8711978-8712077)
chr4 (255-386)||(19741101-19741231)
chr4 (408-542)||(56445350-56445474)
chr4 (262-381)||(7007262-7007382)
chr4 (263-386)||(1112784-1112906)
chr4 (265-386)||(54853661-54853782)
chr4 (265-381)||(23464845-23464963)
chr4 (443-542)||(24736447-24736546)
chr4 (313-471)||(5799959-5800118)
chr4 (464-542)||(11090437-11090515)
chr4 (288-386)||(37828595-37828693)
chr4 (261-386)||(41320638-41320761)
chr4 (265-386)||(51320813-51320934)
chr4 (313-385)||(37915767-37915839)
chr4 (355-542)||(28483923-28484099)
chr4 (265-372)||(29649874-29649981)
chr4 (313-531)||(41581795-41582012)
chr4 (262-381)||(49469210-49469329)
chr4 (313-383)||(20021326-20021396)
chr4 (265-386)||(50018143-50018264)
chr4 (278-394)||(11090296-11090412)
chr4 (67-175)||(20436825-20436933)
chr4 (265-386)||(49501704-49501827)
chr4 (265-386)||(49507769-49507892)
chr4 (281-386)||(12913131-12913237)
chr4 (253-382)||(38230763-38230892)
chr4 (265-372)||(467775-467882)
chr4 (265-375)||(28483875-28483985)
chr4 (265-386)||(32321983-32322104)
chr4 (264-345)||(53275727-53275808)
chr4 (268-365)||(36728026-36728123)
chr4 (256-341)||(44646715-44646800)
chr4 (286-386)||(5799891-5799990)
chr4 (254-341)||(28100587-28100675)
chr4 (265-346)||(24736336-24736416)
chr4 (313-378)||(29855664-29855728)
chr4 (260-341)||(41761977-41762058)
chr4 (262-334)||(27454335-27454407)
chr4 (265-337)||(28847111-28847183)
chr4 (267-383)||(29855576-29855691)
chr4 (260-339)||(8584012-8584091)
chr4 (434-493)||(20021436-20021495)
chr4 (286-341)||(53271933-53271988)
chr4 (311-381)||(3436531-3436601)
chr4 (341-386)||(41320788-41320833)
chr4 (289-386)||(41725041-41725138)
chr4 (314-386)||(9163017-9163089)
chr4 (464-544)||(36727943-36728022)
chr4 (313-345)||(41320802-41320834)
chr4 (266-305)||(44775947-44775986)
chr4 (350-388)||(40143822-40143860)
chr4 (511-549)||(49469411-49469448)
chr4 (350-388)||(54509760-54509798)
chr4 (481-542)||(32684003-32684064)
chr4 (353-386)||(39479592-39479625)
chr4 (289-337)||(53594113-53594161)
[»] chr1 (115 HSPs)
chr1 (313-562)||(19451784-19452032)
chr1 (313-562)||(50192526-50192775)
chr1 (313-562)||(45759985-45760234)
chr1 (321-562)||(21222131-21222371)
chr1 (313-562)||(49198245-49198492)
chr1 (313-562)||(28824349-28824596)
chr1 (313-547)||(45535920-45536160)
chr1 (313-562)||(35679102-35679352)
chr1 (313-540)||(35279648-35279875)
chr1 (313-562)||(47654327-47654577)
chr1 (313-561)||(6304227-6304477)
chr1 (313-562)||(47780687-47780935)
chr1 (272-561)||(31572174-31572470)
chr1 (312-544)||(49418059-49418291)
chr1 (313-542)||(6312550-6312779)
chr1 (313-542)||(29396383-29396612)
chr1 (317-542)||(51701560-51701785)
chr1 (313-542)||(25612133-25612362)
chr1 (313-529)||(46328018-46328234)
chr1 (313-543)||(29556080-29556311)
chr1 (313-542)||(9577427-9577656)
chr1 (313-542)||(15835048-15835277)
chr1 (313-542)||(48177457-48177686)
chr1 (313-502)||(730124-730314)
chr1 (313-542)||(28387388-28387617)
chr1 (313-527)||(32588963-32589177)
chr1 (321-542)||(9322495-9322716)
chr1 (317-547)||(37014630-37014860)
chr1 (265-542)||(38536094-38536361)
chr1 (265-542)||(38558312-38558579)
chr1 (313-508)||(48524295-48524490)
chr1 (261-386)||(19452043-19452168)
chr1 (261-381)||(28824570-28824690)
chr1 (313-460)||(18798467-18798614)
chr1 (313-562)||(33025488-33025726)
chr1 (260-386)||(49198461-49198586)
chr1 (261-386)||(953701-953826)
chr1 (313-451)||(49230862-49231000)
chr1 (253-386)||(22183244-22183377)
chr1 (255-386)||(45760203-45760334)
chr1 (313-542)||(29219264-29219481)
chr1 (260-386)||(35279553-35279679)
chr1 (261-386)||(730031-730155)
chr1 (316-526)||(5495117-5495317)
chr1 (261-386)||(21222030-21222154)
chr1 (258-386)||(15835246-15835374)
chr1 (262-386)||(35679321-35679445)
chr1 (256-386)||(14494089-14494216)
chr1 (265-386)||(25612043-25612164)
chr1 (264-386)||(47654545-47654669)
chr1 (261-381)||(49417966-49418086)
chr1 (261-381)||(50192749-50192869)
chr1 (262-386)||(47780502-47780629)
chr1 (265-386)||(6312460-6312581)
chr1 (261-341)||(6304492-6304572)
chr1 (321-542)||(48668780-48668988)
chr1 (313-383)||(8141282-8141352)
chr1 (265-386)||(8141321-8141442)
chr1 (265-386)||(9322693-9322814)
chr1 (265-386)||(29396581-29396702)
chr1 (313-471)||(45272563-45272719)
chr1 (265-386)||(49230772-49230893)
chr1 (265-385)||(29219174-29219294)
chr1 (267-386)||(28387586-28387705)
chr1 (268-386)||(18798380-18798498)
chr1 (268-386)||(46327931-46328049)
chr1 (261-337)||(33025394-33025470)
chr1 (313-424)||(22183346-22183457)
chr1 (267-381)||(48524208-48524321)
chr1 (313-390)||(953795-953872)
chr1 (265-382)||(9577629-9577746)
chr1 (265-386)||(32589146-32589268)
chr1 (265-386)||(48177655-48177776)
chr1 (410-501)||(955823-955904)
chr1 (277-381)||(29556006-29556106)
chr1 (313-375)||(47784405-47784466)
chr1 (265-386)||(5495289-5495410)
chr1 (265-386)||(45272473-45272594)
chr1 (313-502)||(47784363-47784541)
chr1 (407-543)||(51085865-51086000)
chr1 (284-382)||(19007543-19007641)
chr1 (313-386)||(19452001-19452074)
chr1 (313-386)||(51701514-51701587)
chr1 (267-346)||(42290732-42290811)
chr1 (313-375)||(21222165-21222227)
chr1 (284-382)||(48194612-48194710)
chr1 (284-382)||(48203370-48203468)
chr1 (504-561)||(48524809-48524865)
chr1 (313-365)||(14494185-14494237)
chr1 (261-341)||(42657713-42657793)
chr1 (261-312)||(28541386-28541437)
chr1 (410-469)||(31622527-31622586)
chr1 (427-529)||(38319996-38320098)
chr1 (313-375)||(8141248-8141310)
chr1 (272-346)||(25831139-25831213)
chr1 (313-375)||(51701598-51701660)
chr1 (284-341)||(51826841-51826898)
chr1 (262-337)||(27198271-27198346)
chr1 (313-381)||(47780644-47780713)
chr1 (287-341)||(14555316-14555370)
chr1 (321-385)||(51085704-51085768)
chr1 (349-388)||(10896845-10896884)
chr1 (262-337)||(19893451-19893526)
chr1 (262-341)||(34772311-34772390)
chr1 (350-388)||(1928404-1928442)
chr1 (313-375)||(5495216-5495278)
chr1 (313-375)||(9322620-9322682)
chr1 (350-388)||(36402293-36402331)
chr1 (313-359)||(44290102-44290148)
chr1 (321-379)||(45535886-45535944)
chr1 (313-386)||(47780598-47780675)
chr1 (510-562)||(730307-730357)
chr1 (261-341)||(14229056-14229137)
chr1 (481-542)||(18798615-18798676)
chr1 (326-359)||(25831084-25831117)
[»] scaffold0151 (2 HSPs)
scaffold0151 (355-562)||(38581-38786)
scaffold0151 (255-375)||(38724-38844)
[»] scaffold0037 (2 HSPs)
scaffold0037 (313-544)||(100194-100425)
scaffold0037 (261-386)||(100100-100225)
[»] scaffold0276 (2 HSPs)
scaffold0276 (313-544)||(532-763)
scaffold0276 (312-386)||(732-806)
[»] scaffold0543 (2 HSPs)
scaffold0543 (313-542)||(10543-10772)
scaffold0543 (265-386)||(10453-10574)
[»] scaffold1504 (2 HSPs)
scaffold1504 (313-544)||(846-1077)
scaffold1504 (265-386)||(756-877)
[»] scaffold0306 (1 HSPs)
scaffold0306 (256-542)||(13808-14084)
[»] scaffold0152 (3 HSPs)
scaffold0152 (256-471)||(21304-21519)
scaffold0152 (498-542)||(21243-21287)
scaffold0152 (498-542)||(28510-28554)
[»] scaffold0110 (2 HSPs)
scaffold0110 (313-542)||(39612-39841)
scaffold0110 (278-386)||(39810-39918)
[»] scaffold0042 (1 HSPs)
scaffold0042 (265-542)||(58071-58348)
[»] scaffold0922 (2 HSPs)
scaffold0922 (313-467)||(4183-4337)
scaffold0922 (265-386)||(4093-4214)
[»] scaffold0054 (2 HSPs)
scaffold0054 (409-544)||(36900-37035)
scaffold0054 (269-375)||(37027-37133)
[»] scaffold0651 (2 HSPs)
scaffold0651 (264-386)||(8654-8776)
scaffold0651 (313-361)||(8745-8793)
[»] scaffold0010 (5 HSPs)
scaffold0010 (312-379)||(233719-233786)
scaffold0010 (312-379)||(234567-234634)
scaffold0010 (312-379)||(222551-222618)
scaffold0010 (320-386)||(233685-233751)
scaffold0010 (320-386)||(234533-234599)
[»] scaffold0347 (2 HSPs)
scaffold0347 (464-542)||(14894-14972)
scaffold0347 (265-346)||(14788-14869)
[»] scaffold0839 (1 HSPs)
scaffold0839 (431-542)||(3687-3798)
[»] scaffold0007 (2 HSPs)
scaffold0007 (278-386)||(199730-199838)
scaffold0007 (410-494)||(199905-199989)
[»] scaffold0287 (1 HSPs)
scaffold0287 (285-341)||(11793-11849)
[»] scaffold0492 (2 HSPs)
scaffold0492 (258-322)||(12030-12094)
scaffold0492 (265-322)||(11999-12056)
[»] scaffold0016 (1 HSPs)
scaffold0016 (256-339)||(81789-81872)
[»] scaffold0472 (1 HSPs)
scaffold0472 (261-339)||(1892-1970)


Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 89)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 261 - 562
Target Start/End: Complemental strand, 24502088 - 24501788
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||| |||||||    
T  24502088 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtgttattcaatcaagattctttatcatttaaaaaaag 24501989  T
Q  361 tcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 460  Q
    ||||| |||||||||||||||||||||||| |||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24501988 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 24501889  T
Q  461 atagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgtttttttcttcttaagattttac 560  Q
    || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24501888 atggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttctt-ttaagattttac 24501790  T
Q  561 ta 562  Q
    ||    
T  24501789 ta 24501788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 24 - 259
Target Start/End: Original strand, 10493214 - 10493450
Alignment:
Q  24 tagaggtaaaagattgcaagatgatcttcgacggagatta-tggccatactttgaagtttgtggaagcatcgtaatctcaaactcatgcaaaatgaaaat 122  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  10493214 tagaggtaaaagattgcaagatgatcttcgacggagattcgtggccatactttggagtttatggaagcatcgtaatctcaaactcatgcaaaatgaaaat 10493313  T
Q  123 gagttttgtgtttacgttgttgatcgagcatgacacctcgtgaagggttgggtgacgctccttcgagtaattctcatgtaccagaaggtttggtttgaag 222  Q
    |||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10493314 gagttttgtgttcacgttgttgatcgagcatgacacctcataaagggttgggtgacgctccttcgagtaattctcatgtaccacaaggtttggtttgaag 10493413  T
Q  223 ccaatacggattttaaataacaacatatacaactaag 259  Q
    |||||||| |||| |||||||||||||||||||||||    
T  10493414 ccaatacgaatttcaaataacaacatatacaactaag 10493450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 313 - 559
Target Start/End: Complemental strand, 42938340 - 42938095
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| | |||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  42938340 aaaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 42938241  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  42938240 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcat 42938141  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagatttta 559  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  42938140 gaaaacatgagatttcttaggattgtttttttctt-ttaagatttta 42938095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 2705042 - 2704794
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  2705042 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 2704943  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  2704942 ttcaaaatcattcaaatttcgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcat 2704843  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2704842 gaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 2704794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 321 - 562
Target Start/End: Complemental strand, 26374645 - 26374405
Alignment:
Q  321 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaat 420  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||||||||||    
T  26374645 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 26374546  T
Q  421 cattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacat 520  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26374545 cattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 26374446  T
Q  521 gagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  26374445 gagatttcttaggattgtttttttctt-ttaaaattttacta 26374405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 42937336 - 42937582
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| | |||||||||| |||||||||||| |||||||||||  ||||||||||| |||        ||||||||||    
T  42937336 aaaaagtcttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggta 42937433  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  42937434 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcat 42937533  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  42937534 gaaaacatgagatttcttatgattgtttttttctt-ttaagattttacta 42937582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 42735500 - 42735252
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| ||||| |||||| ||||||| |||| |||||||||| ||||||||||||| |||        ||||||||||    
T  42735500 aaaaagtcttgtgttattcaatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggta 42735401  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  42735400 ttcaaaatcattcaaatttcgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcat 42735301  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42735300 aaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 42735252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 5576844 - 5576595
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt-tctagtggt 411  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||         || ||||||    
T  5576844 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggt 5576745  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca 511  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |    
T  5576744 attcaaaatcattcaaatttcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttta 5576645  T
Q  512 tgaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  5576644 tgaaaacatgagatttcttaggattgttttttcctt-ttaagattttacta 5576595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 321 - 562
Target Start/End: Complemental strand, 7507114 - 7506874
Alignment:
Q  321 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaat 420  Q
    ||||| ||||||||| ||| || ||||||||| | |||||||||| |||||||||||||||||||||||| |||        |||||||||||||||||     
T  7507114 ttgtgttattcaatcgagattccttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaac 7507015  T
Q  421 cattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacat 520  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  7507014 cattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacat 7506915  T
Q  521 gagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  7506914 gagatttcttaggattgtttttttctt-ttaagattttacta 7506874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 313 - 543
Target Start/End: Complemental strand, 23115391 - 23115162
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||| |||||| |||||||||||||||||||||||| |||        ||||||||||    
T  23115391 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 23115292  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| |||||||||    
T  23115291 ttcaaa-tcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcat 23115193  T
Q  513 gaaaacatgagatttcttaggattgtttttt 543  Q
    |||||||||||||| ||||||||||||||||    
T  23115192 gaaaacatgagattccttaggattgtttttt 23115162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 313 - 558
Target Start/End: Complemental strand, 10392460 - 10392217
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||| |||| || ||||||||||||| ||||||||||||||||||| ||||| | ||||||||||||||| |||||| |||        ||||||||||    
T  10392460 aaaaaatcttatgttattcaatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggta 10392361  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||    
T  10392360 ttcagaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcat 10392261  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagatttt 558  Q
    ||||||||||||||| |||||||| |||||||||| ||||||||||    
T  10392260 gaaaacatgagatttattaggatt-tttttttctt-ttaagatttt 10392217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 41479080 - 41479318
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||| ||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        |||| |||||    
T  41479080 aaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggta 41479179  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||| ||||||||||||||||||||          |||||||||||||||||| |||||||||||||||||  ||||||||    
T  41479180 ttcaaaatcattcaaatttcgaatgattgtttaataaatcagat----------tttgtgggattttctagtaaaattttagcatgaaaaaatctttcat 41479269  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41479270 gaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 41479318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 14782358 - 14782129
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  14782358 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 14782259  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  14782258 ttcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 14782159  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  14782158 gaaaagatgagatttcttgagattgttttt 14782129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 44726033 - 44725804
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  44726033 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 44725934  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  44725933 ttcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 44725834  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  44725833 gaaaagatgagatttcttgagattgttttt 44725804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 9288680 - 9288451
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | | || ||| |||        ||| ||||||    
T  9288680 aaaaagtcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggta 9288581  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||  ||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  9288580 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 9288481  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  9288480 gaaaagatgagatttcttgagattgttttt 9288451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 19718104 - 19717875
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  19718104 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 19718005  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||| ||||||||||||||  |||||| || |||||||||||||||| ||||| ||||||| || ||||| |||||| ||    
T  19718004 ttcaaaatcattcaaatttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttat 19717905  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  19717904 gaaaagatgagatttcttgagattgttttt 19717875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 43959641 - 43959878
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||||| |||         |||||||||    
T  43959641 aaaaagtcttgtgttattcaatcaagattctttgtcattttaaaaaagtcttgtg-tattcaatcaagattcttaatcacttcaaaaaagactagtggta 43959739  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||          |||||||||||||||||||| |||||| ||    
T  43959740 ttcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtg----------gtgaaattttagcatgaaaaagtctttaat 43959829  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
     |||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  43959830 taaaacatgagatttcttatgattgtttttttctt-ttaagattttacta 43959878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 18958950 - 18958721
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  18958950 aaaaagtcttgtggtattcaatcaagactctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 18958851  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  |||||| || |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  18958850 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 18958751  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| || |||||| ||  ||||||||||    
T  18958750 gaaaagattagattttttgagattgttttt 18958721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 39467691 - 39467462
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  39467691 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 39467592  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||| |||||| ||||||||| ||||| ||||||| || |||||  ||||||||    
T  39467591 ttcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcat 39467492  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||| ||  ||||||||||    
T  39467491 gaaaagatgagattttttgagattgttttt 39467462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 256 - 530
Target Start/End: Complemental strand, 43166970 - 43166696
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||||||  |||||||||| | |||| || |||||||| ||| ||||||| || | |||||||||||||||||||||||||||||| ||||  |||| ||    
T  43166970 taagaggaatgtattggattaagattttatgggattttaaaatactttttaattaagaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 43166871  T
Q  356 aaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga 455  Q
    |||||||||| ||||||||||||||||||||  ||  ||        ||| |||||||||||||||||||||||||||||||||||||||||||||  ||    
T  43166870 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga 43166771  T
Q  456 ttttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttctt 530  Q
    ||||||| |||||||||||||||| | ||| ||||||| || ||||| || ||||||||||| ||||||||||||    
T  43166770 ttttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttctt 43166696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 4403090 - 4403319
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||||||||||||||||||||||| || ||||||||||||| |||||| ||||||||| |||| | || ||| |||        ||| ||||||    
T  4403090 aaaaagtcttgtggtattcaatcaagactcattttcattttaaaaaaatcttgaagtattcaattaagatttttcatcacttaaaaaaaatctcgtggta 4403189  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  4403190 ttcaaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtctttcat 4403289  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| |||||||||||| |||||||||||    
T  4403290 gaaaatatgagatttcttgggattgttttt 4403319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 314 - 544
Target Start/End: Complemental strand, 10295603 - 10295372
Alignment:
Q  314 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtat 413  Q
    ||||||||| ||| ||||||||||||||||| |||| || |||||||||||||||||||||||||||||| || ||| |||        ||| |||||||    
T  10295603 aaaagtcttctggcattcaatcaagactcttcgtcacttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 10295504  T
Q  414 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgataga-ttttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| || |||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  10295503 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 10295404  T
Q  513 gaaaacatgagatttcttaggattgttttttt 544  Q
    ||||| ||||||||||||  ||||||||||||    
T  10295403 gaaaagatgagatttcttgagattgttttttt 10295372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 7466318 - 7466537
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||        ||| ||||||    
T  7466318 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggta 7466417  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||| |||| ||||||||||||||          | |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  7466418 ttcaaaatcattcaaattttgaagaattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 7466507  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  7466508 gaaaagatgagatttcttgagattgttttt 7466537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 321 - 542
Target Start/End: Original strand, 26856057 - 26856279
Alignment:
Q  321 ttgtggtattcaatcaagactctttgtcattttaaaaaagtctt-gaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaa 419  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| |||        ||| |||||||||||||    
T  26856057 ttgtggtattcaatcaagactctttgtcattttaaaaaagtctttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaa 26856156  T
Q  420 tcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaaca 519  Q
    ||||||||||||||||| ||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| ||||||||  |||| |    
T  26856157 tcattcaaatttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaaaa 26856256  T
Q  520 tgagatttcttaggattgttttt 542  Q
    | |||||||||  ||||||||||    
T  26856257 taagatttcttgagattgttttt 26856279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 313 - 539
Target Start/End: Complemental strand, 18306184 - 18305968
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  18306184 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 18306085  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||| |||||||||||||||          | |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  18306084 ttcaaaatcattcaaatttcgaaagattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 18305995  T
Q  513 gaaaacatgagatttcttaggattgtt 539  Q
    ||||| ||||||||||||  |||||||    
T  18305994 gaaaagatgagatttcttgagattgtt 18305968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 32497508 - 32497727
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  32497508 aaaaaatcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 32497607  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||| |||||||||||||||          | |||||||||||||||| ||||| ||||||| || || || |||||||||    
T  32497608 ttcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagagaaagtctttcat 32497697  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  32497698 gaaaagatgagatttcttgagattgttttt 32497727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 313 - 460
Target Start/End: Complemental strand, 32711505 - 32711358
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  32711505 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 32711406  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 460  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  32711405 ttcaaaatcatttaaatttcgaaggattgtttaataaatcagattttg 32711358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 265 - 542
Target Start/End: Complemental strand, 39190084 - 39189810
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | |||||||||||||||| ||||||||||| || |||||    | ||||||||||||||||||||||||||  |||| |||||||||||    
T  39190084 tgtattggattaggattctaagggattttaaaagactttttaattatgaattttttttgtggtattcaatcaagactctttgcaatttaaaaaaagtctt 39189985  T
Q  365 gaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatag 464  Q
    | |||||||||| || |||||| |||  ||        |||  || ||||||| |||||||||||||||||||||||||||||||||  || |||||| |    
T  39189984 gtggtattcaataaaaactctttatcatttaaaaaaagtctcatg-tattcaacatcattcaaatttcgaaggattgtttaataaat-tgaatttgatgg 39189887  T
Q  465 attttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    ||||||  | |||||||||| |||||||| || |||||  |||||||||||||||||||||||||| |||||||||||    
T  39189886 attttgatgaattttctagt-aaattttaacaagaaaaaatctttcatgaaaacatgagatttcttgggattgttttt 39189810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 256 - 386
Target Start/End: Complemental strand, 42735599 - 42735469
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||    
T  42735599 taaggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 42735500  T
Q  356 aaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||| | ||||||||||||| ||||    
T  42735499 aaaagtcttgtgttattcaatcaagattctt 42735469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 313 - 471
Target Start/End: Original strand, 16362179 - 16362337
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  |||        ||| ||||||    
T  16362179 aaaaaatcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggta 16362278  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgt 471  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  16362279 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 16362337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 261 - 386
Target Start/End: Complemental strand, 23115485 - 23115360
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||| |||||||    
T  23115485 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 23115386  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  23115385 tcttgtgttattcaatcaagattctt 23115360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 42306008 - 42305789
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  42306008 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggta 42305909  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||| |||||||||||||||||||||||||| |||  |||||| ||          ||||||| ||||| ||||||| || ||||| ||| |||||    
T  42305908 ttcaaaataattcaaatttcgaaggattgtttaatcaattggattttaat----------ggattttgtagtgtaattttaacaagaaaaagtcattcat 42305819  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  42305818 gaaaaaatgagatttcttgagattgttttt 42305789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 313 - 460
Target Start/End: Original strand, 31623678 - 31623825
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  31623678 aaaaagtctcttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 31623777  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 460  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  31623778 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 31623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 313 - 460
Target Start/End: Complemental strand, 4031481 - 4031334
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||   ||        ||| ||||||    
T  4031481 aaaaagtcttgtggtattcaatcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggta 4031382  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 460  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  4031381 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 264 - 386
Target Start/End: Original strand, 41478989 - 41479111
Alignment:
Q  264 gtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtct 363  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||| |||||||| |    
T  41478989 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagttt 41479088  T
Q  364 tgaggtattcaatcaagactctt 386  Q
    || | ||||||||||||| ||||    
T  41479089 tgtgttattcaatcaagattctt 41479111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 261 - 386
Target Start/End: Complemental strand, 32711599 - 32711474
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||   |||| |||||||    
T  32711599 ggggtgtattggatcatgattctaagagactttaaaagacttttttatcatgaaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaag 32711500  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  32711499 tcttgtgttattcaatcaagattctt 32711474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 262 - 345
Target Start/End: Complemental strand, 7507215 - 7507132
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 345  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7507215 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 7507132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 261 - 386
Target Start/End: Complemental strand, 2705136 - 2705011
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||| ||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||   | || |||||||    
T  2705136 ggggtgtattggatcatgattgtaaaggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaaattaaaaaaag 2705037  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  2705036 tcttgtgttattcaatcaagattctt 2705011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 261 - 386
Target Start/End: Complemental strand, 5576938 - 5576813
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    |||||||||||||| |||||||||||||||||| ||||| |||||| |||||||| |||||||||||||||||||||||||||||   |||| |||||||    
T  5576938 ggggtgtattggattatgattctaagggattttaaaagatttttttgtcatgaaatagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 5576839  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  5576838 tcttgtgttattcaatcaagattctt 5576813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 14782448 - 14782327
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||| |||||||||||    
T  14782448 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 14782349  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  14782348 gtggtattcaatcaagactctt 14782327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 44726123 - 44726002
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||| |||||||||||    
T  44726123 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 44726024  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  44726023 gtggtattcaatcaagactctt 44726002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 260 - 359
Target Start/End: Complemental strand, 24214909 - 24214811
Alignment:
Q  260 aggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 359  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||    
T  24214909 aggggtgtattggatcatgattctaaaggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttt-tcaatttaaaaaa 24214811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 409 - 543
Target Start/End: Complemental strand, 4950143 - 4950009
Alignment:
Q  409 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctt 508  Q
    ||||||||||||||||||| |||| || |||| |||||||||| |||||||||| || ||||||| ||||||||||||||||||||||||||||  | ||    
T  4950143 ggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaaaaatatt 4950044  T
Q  509 tcatgaaaacatgagatttcttaggattgtttttt 543  Q
    ||||| |||||| ||||||||||  ||||||||||    
T  4950043 tcatgcaaacataagatttcttaaaattgtttttt 4950009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 256 - 345
Target Start/End: Original strand, 26373688 - 26373778
Alignment:
Q  256 taagaggggtgtattgg-atcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 345  Q
    |||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26373688 taaggggggtgtattgggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 26373778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 26374741 - 26374622
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||   |||| |||||||  ||    
T  26374741 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaag--tt 26374644  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | | ||||||||||||| ||||    
T  26374643 gtgttattcaatcaagattctt 26374622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 254 - 386
Target Start/End: Complemental strand, 4031582 - 4031450
Alignment:
Q  254 actaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttt 353  Q
    |||||| ||| |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||| ||||||||| ||||  ||||     
T  4031582 actaagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaagactttttgcaattta 4031483  T
Q  354 aaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||||| ||||||||||||||| ||||    
T  4031482 aaaaaagtcttgtggtattcaatcaagaatctt 4031450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 262 - 381
Target Start/End: Complemental strand, 42938433 - 42938314
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    |||| |||||||| || ||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||   |||| ||||||||    
T  42938433 gggtttattggattataattttaagggattttaaaagacttttttaccatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagt 42938334  T
Q  362 cttgaggtattcaatcaaga 381  Q
    |||| | |||||||||||||    
T  42938333 cttgtgttattcaatcaaga 42938314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 264 - 386
Target Start/End: Original strand, 43959549 - 43959672
Alignment:
Q  264 gtgtattggatcatgattctaagggattttcaaagactttt-ttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtc 362  Q
    ||||||| |||||||||| ||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||   |||| |||||||||    
T  43959549 gtgtatttgatcatgattttaaaggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 43959648  T
Q  363 ttgaggtattcaatcaagactctt 386  Q
    ||| | ||||||||||||| ||||    
T  43959649 ttgtgttattcaatcaagattctt 43959672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 256 - 386
Target Start/End: Complemental strand, 18959049 - 18958919
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||| |||||||||| | ||||||| | |||||| ||||||||||| || ||||||||||||||| |||||||||||||||| ||||  |||| ||    
T  18959049 taagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtagtattcaatcaagactttttgcaatttaaa 18958950  T
Q  356 aaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||| ||||||||||||||||||||    
T  18958949 aaaagtcttgtggtattcaatcaagactctt 18958919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 265 - 383
Target Start/End: Original strand, 32497376 - 32497494
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||   | || |||||||||||    
T  32497376 tgtattggattaggattctatgggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaaagtctt 32497475  T
Q  365 gaggtattcaatcaagact 383  Q
    | |||||||||||||||||    
T  32497476 gtggtattcaatcaagact 32497494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 255 - 386
Target Start/End: Complemental strand, 42306108 - 42305977
Alignment:
Q  255 ctaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttta 354  Q
    ||||| ||| |||||||||| | ||||||| | |||||| ||||||||||| || |||||||||||||||| ||||||||||||| | ||||  |||| |    
T  42306108 ctaagggggatgtattggattaggattctatgtgattttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaagaatttttgcaatttaa 42306009  T
Q  355 aaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||||||||| ||||||||||||||||||||    
T  42306008 aaaaagtcttgtggtattcaatcaagactctt 42305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 262 - 337
Target Start/End: Original strand, 42937250 - 42937325
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 337  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42937250 gggtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 42937325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 7466228 - 7466349
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| | |||||| ||||| ||||| || |||||||||||||||||||||||||||||||| ||||  | || |||||||||||    
T  7466228 tgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 7466327  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  7466328 gtggtattcaatcaagactctt 7466349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 19718194 - 19718073
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| |||||| |||| || ||||||||||| || ||||||||||||||||| ||||  |||| |||||||||||    
T  19718194 tgtattggattaggattctatgggattttaaaagaccttttaattatgaaaaagtcctgcggtattcaatcaagactttttgcaatttaaaaaaagtctt 19718095  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  19718094 gtggtattcaatcaagactctt 19718073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 267 - 386
Target Start/End: Complemental strand, 39467778 - 39467660
Alignment:
Q  267 tattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttga 366  Q
    |||||||| | ||||||| | |||||| ||||||||||| || |||||||||||||||||||||||||||||||| |||  ||  ||||||||||||||     
T  39467778 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact-ttttacaacttaaaaaagtcttgt 39467680  T
Q  367 ggtattcaatcaagactctt 386  Q
    ||||||||||||||||||||    
T  39467679 ggtattcaatcaagactctt 39467660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 16362089 - 16362210
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||| ||| | ||||||| |||||||| ||||||||||| || |||||||||| ||||||||||||||||||||| ||||| | || |||||| ||||    
T  16362089 tgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgtaacttaaaaaaaatctt 16362188  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | | ||||||||||||||||||    
T  16362189 gtgatattcaatcaagactctt 16362210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 10295694 - 10295573
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||| ||||| || |||||||||||||||||||||||||||||||| ||||  | || | |||||||||    
T  10295694 tgtattggattaggattctatgggattttaaaagagtttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaagaaaagtctt 10295595  T
Q  365 gaggtattcaatcaagactctt 386  Q
      || |||||||||||||||||    
T  10295594 ctggcattcaatcaagactctt 10295573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 18306274 - 18306153
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    ||||||| || | ||||||| || |||||  |||| ||||| || |||||||||||||||||||||||||||||||| ||||  | || |||||||||||    
T  18306274 tgtattgaattaggattctatggaattttagaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 18306175  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  18306174 gtggtattcaatcaagactctt 18306153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 31623588 - 31623709
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| || ||||| ||||| ||||| || ||||||||||||||||| |||||||||||||| ||||| | || ||||||||||     
T  31623588 tgtattggattaggattctatggaattttaaaagattttttaattatgaaaaagtcttgtggcattcaatcaagactttttgtaacttaaaaaaagtctc 31623687  T
Q  365 gaggtattcaatcaagactctt 386  Q
      ||||||||||||||||||||    
T  31623688 ttggtattcaatcaagactctt 31623709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 256 - 384
Target Start/End: Original strand, 4402991 - 4403119
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||| |||||||||| |||||| || | |||||| ||||||||||| ||  |||||||||||| |||||||||||||| ||| ||||  | || ||    
T  4402991 taagggggatgtattggattatgattatatgagattttaaaagactttttaattgtgaaaaagtcttttggtattcaatcaaaactttttgcaacttaaa 4403090  T
Q  356 aaaagtcttgaggtattcaatcaagactc 384  Q
    |||||||||| ||||||||||||||||||    
T  4403091 aaaagtcttgtggtattcaatcaagactc 4403119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 410 - 517
Target Start/End: Complemental strand, 13478376 - 13478269
Alignment:
Q  410 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtcttt 509  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||| | | |||||||| ||||||| |||  |||||||||||||| || ||||||    
T  13478376 gtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggattttttagctaaattttagcatgataaagtcttt 13478277  T
Q  510 catgaaaa 517  Q
     |||||||    
T  13478276 tatgaaaa 13478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 408 - 516
Target Start/End: Complemental strand, 8410526 - 8410416
Alignment:
Q  408 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtggga--ttttctagtgaaattttagcatgaaaatgt 505  Q
    ||||||||||||||||| |||||| ||||||||||||| |||||  || |||||| ||||||||||||  |||| |||||||||||||| |||| || ||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggattttttttagtgaaattttagtatgacaaagt 8410427  T
Q  506 ctttcatgaaa 516  Q
    |||||| ||||    
T  8410426 ctttcacgaaa 8410416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 8543408 - 8543487
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaaga-cttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    |||||||||| |||||||||||||||||||||| |||||  ||||||||||| ||||||| |||||||||||||||||||    
T  8543408 ggggtgtattagatcatgattctaagggattttaaaagattttttttatcataaaaaagttttgtggtattcaatcaaga 8543487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 255 - 386
Target Start/End: Complemental strand, 9288773 - 9288649
Alignment:
Q  255 ctaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttta 354  Q
    ||||| ||| |||||||||| ||||||||| | |||||| ||||||||||| || |||||||||||||||||       |||||||| ||||  |||| |    
T  9288773 ctaagggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtgg-------tcaagactttttgcaatttaa 9288681  T
Q  355 aaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||||||||| | ||||||||||||||||||    
T  9288680 aaaaagtcttgtgatattcaatcaagactctt 9288649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 26855961 - 26856080
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| | |||||| |||||||||   || |||||||||| ||||||||||||||||||||| ||||  | || |||||| | ||    
T  26855961 tgtattggattaggattctatgagattttaaaagacttta--attatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaaatatt 26856058  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  26856059 gtggtattcaatcaagactctt 26856080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 265 - 375
Target Start/End: Complemental strand, 43308592 - 43308482
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| || ||||| ||||||||||| || ||||||||||||| |||||||||||||| |   ||| ||| || ||| |||||||    
T  43308592 tgtattggattaggattctatggaattttaaaagactttttaattatgaaaaagtcttctggtattcaatcaaaaaattttatcacttaaaataagtctt 43308493  T
Q  365 gaggtattcaa 375  Q
    |||||||||||    
T  43308492 gaggtattcaa 43308482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 32497466 - 32497539
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||||||||||||||||||||||||||| ||||  | || |||||| ||||| ||||||||||||| ||||||    
T  32497466 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaatactctt 32497539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 407 - 542
Target Start/End: Original strand, 37857196 - 37857321
Alignment:
Q  407 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtc 506  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||  ||||||||| ||||||||          |||| ||||| | || |||||  ||    
T  37857196 gtggtattcaaattcattcaaattttaaaggattgtttaataaattggattttgatggattttgt----------agtgtaatttgaacaagaaaaaatc 37857285  T
Q  507 tttcatgaaaacatgagatttcttaggattgttttt 542  Q
    ||||||||||| ||||||||||||  ||||||||||    
T  37857286 tttcatgaaaagatgagatttcttgagattgttttt 37857321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 26374611 - 26374549
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||||||||||||||||||||||||  ||| || |||||||||| | |||||||||    
T  26374611 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 26374549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 314 - 375
Target Start/End: Complemental strand, 7507079 - 7507018
Alignment:
Q  314 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    |||||||||||||||||||||||||||||||  ||| || |||||||||| | |||||||||    
T  7507079 aaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 7507018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 542
Target Start/End: Complemental strand, 9770503 - 9770434
Alignment:
Q  473 ggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    |||||||||| |||||||||| ||| ||||  | |||||| |||||||||||||||||||||||| ||||    
T  9770503 ggattttctaatgaaattttaacataaaaaaatatttcatcaaaacatgagatttcttaggattgctttt 9770434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 386
Target Start/End: Complemental strand, 9771135 - 9771009
Alignment:
Q  258 agaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaa 357  Q
    |||||| |||||||||| | |||| ||||||||||| ||| |  |||||||||||||||||  |||||  |||||||||| ||||||||  | || ||||    
T  9771135 agagggatgtattggattaagattttaagggattttaaaata--tttttatcatgaaaaagcattgtgtcattcaatcaatactctttgcaacttaaaaa 9771038  T
Q  358 aagtcttgaggtattcaatcaagactctt 386  Q
    |||| |||   ||||||||||||| ||||    
T  9771037 aagttttgttttattcaatcaagaatctt 9771009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 10493748 - 10493812
Alignment:
Q  112 aaaatgaaaatgagttttgtgtttacgttgttgatcgagcatgacacctcgtgaagggttgggtg 176  Q
    |||| |||||||||||||||||| |||||||||||||||||  |||||| ||  |||||||||||    
T  10493748 aaaacgaaaatgagttttgtgttcacgttgttgatcgagcacaacacctagtagagggttgggtg 10493812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 10295562 - 10295500
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||| ||||||||||||||||| ||  ||| || |||||||||||| |||||||||    
T  10295562 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 10295500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 29260361 - 29260283
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    ||||||||||||||   |||| ||| ||||||| |||||||||||| |  |  ||||||||||||||||||||||||||    
T  29260361 ggggtgtattggattgagattttaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaga 29260283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 267 - 379
Target Start/End: Complemental strand, 29930956 - 29930843
Alignment:
Q  267 tattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattt-taaaaaagtcttg 365  Q
    |||||||| | |||| ||||||||||| | || |||||||  |||||| |  | ||||||||||||||||||| | |||||||||| ||||||| |||||    
T  29930956 tattggattaggattttaagggattttaataggctttttttacatgaatattttttgtggtattcaatcaagattatttgtcatttataaaaaaatcttg 29930857  T
Q  366 aggtattcaatcaa 379  Q
       |||||||||||    
T  29930856 tattattcaatcaa 29930843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 525
Target Start/End: Complemental strand, 32711346 - 32711305
Alignment:
Q  484 tgaaattttagcatgaaaatgtctttcatgaaaacatgagat 525  Q
    ||||||||||||||||||| |||||||||||||||| |||||    
T  32711346 tgaaattttagcatgaaaaagtctttcatgaaaacaagagat 32711305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 260 - 337
Target Start/End: Original strand, 35142040 - 35142117
Alignment:
Q  260 aggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 337  Q
    |||||||||||||||   |||| ||| ||||||| |||||||||||  |  | |||||||||||||||||||||||||    
T  35142040 aggggtgtattggattgagattttaatggattttaaaagactttttcgttttaaaaaagtcttgtggtattcaatcaa 35142117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 286 - 375
Target Start/End: Original strand, 37857117 - 37857206
Alignment:
Q  286 gggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    |||||||| ||||| ||||| || |||||||||| ||| |||||||||| |||| | ||  ||| || |||||||||||| |||||||||    
T  37857117 gggattttaaaagattttttaattatgaaaaagttttgaggtattcaattaagatttttcatcacttaaaaaaagtcttgtggtattcaa 37857206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 8543506 - 8543574
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 381  Q
    ||||||| ||||| |||| |||||||| ||||||| |||| |||||||||||  |||||||||| ||||    
T  8543506 aaaaagtgttgtgttatttaatcaagattctttgttatttaaaaaaagtcttatggtattcaattaaga 8543574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 339
Target Start/End: Original strand, 14061544 - 14061623
Alignment:
Q  260 aggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    |||||||||||| ||   |||| || || ||||| |||||||||||||   | |||||||||||||||||||||||||||    
T  14061544 aggggtgtattgtattgggattttatggaattttaaaagacttttttaaagtaaaaaagtcttgtggtattcaatcaaga 14061623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 1606098 - 1606020
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    ||||||||||||||   ||||  || ||||||| |||||||||||| |  |  ||||||||||||||||||||||||||    
T  1606098 ggggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaga 1606020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 388
Target Start/End: Complemental strand, 4302846 - 4302808
Alignment:
Q  350 ttttaaaaaagtcttgaggtattcaatcaagactcttaa 388  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  4302846 ttttaaaaaagtctttaggtattcaatcaagactgttaa 4302808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 383
Target Start/End: Complemental strand, 9771040 - 9770970
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 383  Q
    ||||||| ||||  ||||||||||||| ||||| |||||| |||||||||  |  ||||||||||||||||    
T  9771040 aaaaagttttgttttattcaatcaagaatctttctcatttaaaaaaagtcacgttgtattcaatcaagact 9770970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 339
Target Start/End: Original strand, 2112791 - 2112868
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    |||||||||||||   ||||  || ||||||| |||||||||||| |  |  ||||||||||||||||||||||||||    
T  2112791 gggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaga 2112868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 386
Target Start/End: Complemental strand, 24214858 - 24214825
Alignment:
Q  353 taaaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||||||||||| ||||||||||||||||||||    
T  24214858 taaaaaagtcttgtggtattcaatcaagactctt 24214825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 41069927 - 41070000
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||| ||||| || ||||||||||||||| |  |||||||  ||||||| ||| ||||||||| ||||||||||    
T  41069927 aaaatgtcttatgatattcaatcaagactttacgtcatttataaaaagttttgtggtattcaaccaagactctt 41070000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 261 - 337
Target Start/End: Original strand, 42366049 - 42366125
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 337  Q
    ||||||||||||||  |||||  || | ||||| ||||| |||||||| || ||||||| | |||||||||||||||    
T  42366049 ggggtgtattggattgtgatttcaaagcattttaaaagatttttttatgataaaaaagtttggtggtattcaatcaa 42366125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 43605423 - 43605371
Alignment:
Q  287 ggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    ||||||| |||||||||||| |  |  ||||||||||||||||||||||||||    
T  43605423 ggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaga 43605371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 221; Significance: 1e-121; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 261 - 562
Target Start/End: Complemental strand, 7017014 - 7016714
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||| |||||||    
T  7017014 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaag 7016915  T
Q  361 tcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 460  Q
    |||||  ||||||||||||||||||||||| |||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7016914 tcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 7016815  T
Q  461 atagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgtttttttcttcttaagattttac 560  Q
    || ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  7016814 atggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttagaattgtttttttctt-ttaagattttac 7016716  T
Q  561 ta 562  Q
    ||    
T  7016715 ta 7016714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 313 - 559
Target Start/End: Original strand, 21147050 - 21147294
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  21147050 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 21147149  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21147150 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 21147249  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagatttta 559  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||    
T  21147250 gaaaacatgagatttcttaggattgtttttttct--ttaagatttta 21147294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 33656266 - 33656017
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactcttt--gtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtgg 410  Q
    ||||||||||||| ||||||||||||| |||||  ||||||| |||||||||||| |||||||||||||||||||||||| |||        |||| |||    
T  33656266 aaaaagtcttgtgttattcaatcaagattctttttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatgg 33656167  T
Q  411 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttc 510  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  33656166 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 33656067  T
Q  511 atgaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||    
T  33656066 atgaaaatatgagatttcttaggattgtt-ttttctt-ttaagattttacta 33656017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 5273142 - 5272894
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||  ||||||||||||||||||||||||  ||        ||||||||||    
T  5273142 aaaaagtcttgtgctattcaatcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggta 5273043  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5273042 ttcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 5272943  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
     ||||||||||||||||||   ||||||||| ||| |||| |||||||||    
T  5272942 aaaaacatgagatttcttaattttgttttttactt-ttaaaattttacta 5272894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 27459172 - 27458925
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| |||||||| |||| |||||||||||| ||||||||||||  ||||||||||||||||||||||| |||       | |||||||||    
T  27459172 aaaaagtcttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaagt-ctagtggta 27459074  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||| |||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||  || |||||    
T  27459073 ttcaaaatcattcagattttgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcat 27458974  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  27458973 gaaaacatgatatttcttaggattgtttttttctt-ttaagattttacta 27458925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 1152326 - 1152097
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  1152326 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggta 1152227  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||| ||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||| ||    
T  1152226 ttcaaaatcattcaaatttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttat 1152127  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||| ||||||||||    
T  1152126 gaaaagatgagatttcttaagattgttttt 1152097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 313 - 561
Target Start/End: Original strand, 139256 - 139504
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||| ||||| ||||||||||||| |||||||||||| ||||||||| || ||||||||||||||||| |||||| |||        ||||||||||    
T  139256 aaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggta 139355  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||  ||||||| |||||||||    
T  139356 ttcaaaatcattcaaatttcgaaggattgtttaataaaccagattttgatggattttgttggattttccagtgaaattttaatatgaaaaagtctttcat 139455  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttact 561  Q
     ||||||||||||||||||  ||| |||||||  | |||||||||||||    
T  139456 aaaaacatgagatttcttaaaattattttttttcttttaagattttact 139504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 32158121 - 32157869
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt-tctagtggt 411  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||| | ||||| |||         |||||||||    
T  32158121 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggt 32158022  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaa---tgtctt 508  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||| ||||||||||| |||||    |||||    
T  32158021 attcaaaatcattcaaatttcgaaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctt 32157922  T
Q  509 tcatgaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||||||||||||||||  |||||| ||||||| ||||||||||||||    
T  32157921 tcatgaaaacatgagatttcttaaaattgttcttttctt-ttaagattttacta 32157869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 14000328 - 14000099
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  14000328 aaaaaatcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 14000229  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  14000228 ttcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 14000129  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  14000128 gaaaagatgagatttcttgagattgttttt 14000099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 313 - 544
Target Start/End: Complemental strand, 4550480 - 4550249
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| || ||| |||        ||| ||||||    
T  4550480 aaaaagtcttgtggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 4550381  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||| ||||| ||||||| || ||||  |||||||||    
T  4550380 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcat 4550281  T
Q  513 gaaaacatgagatttcttaggattgttttttt 544  Q
    ||||| ||||||||| ||  ||||||||||||    
T  4550280 gaaaagatgagatttgttgagattgttttttt 4550249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 13925914 - 13926143
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||  |||        ||| ||||||    
T  13925914 aaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggta 13926013  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| ||||||||     
T  13926014 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaa 13926113  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| |||| |||||||  ||||||||||    
T  13926114 gaaaagatgatatttcttgagattgttttt 13926143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 355 - 517
Target Start/End: Original strand, 849172 - 849334
Alignment:
Q  355 aaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 454  Q
    ||||||||||| |||||||||||||||||||||||| |||        |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  849172 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 849271  T
Q  455 attttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaa 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  849272 attttgatagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 313 - 502
Target Start/End: Original strand, 6460775 - 6460964
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||| || ||||||||||||| |||||||||||| ||||||||| ||  |||||||||||||||||||||||  ||        ||||||||||    
T  6460775 aaaaagtcttatgttattcaatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggta 6460874  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaa 502  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||    
T  6460875 ttcaaaatcattcaaatttcgaaggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaattttatcatgaaaa 6460964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 330 - 530
Target Start/End: Complemental strand, 7947779 - 7947579
Alignment:
Q  330 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaat 429  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| | | |||||||||||||||||||    
T  7947779 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaat 7947680  T
Q  430 ttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttct 529  Q
    ||||||||||||||||||||||  ||||||||| |||||||||| ||||| ||||| ||||||| || ||||| |||||||||||||| | |||||||||    
T  7947679 ttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttct 7947580  T
Q  530 t 530  Q
    |    
T  7947579 t 7947579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 4240675 - 4240456
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  4240675 aaaaaatcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 4240576  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||          ||||||| ||||| ||||||| || ||||| |||||||||    
T  4240575 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcat 4240486  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||| | ||||||||||||  ||||||||||    
T  4240485 gaatagatgagatttcttgagattgttttt 4240456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 5949092 - 5949310
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | || ||| |||        ||| ||||||    
T  5949092 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaa-tcttgtggta 5949190  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||          ||||||| ||||| ||||||| || ||||| |||||||||    
T  5949191 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcat 5949280  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  5949281 gaaaagatgagatttcttgagattgttttt 5949310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 40013925 - 40013706
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||| ||    
T  40013925 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgtta 40013826  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||||||||||||||| |||  |||||| ||          ||||||| ||||| ||||||| || ||||| |||||||||    
T  40013825 ttcaaaatcattcaaatttcgaaggattgtttaatcaattggattttaat----------ggattttgtagtgtaattttaacaagaaaaagtctttcat 40013736  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  40013735 gaaaagatgagatttcttgagattgttttt 40013706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 325 - 497
Target Start/End: Complemental strand, 14465438 - 14465266
Alignment:
Q  325 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcatt 424  Q
    |||||||||||||||||||||||||||| |||||||| ||  |||||||||||||||||||| |||||||        ||| ||||||||||||||||||    
T  14465438 ggtattcaatcaagactctttgtcatttaaaaaaagttttctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcatt 14465339  T
Q  425 caaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcat 497  Q
    ||||||||||| |||||||||||||||| |||||||||  ||||||||| |||||||||| | ||||||||||    
T  14465338 caaatttcgaaagattgtttaataaatcggattttgatgaattttgtggaattttctagtaatattttagcat 14465266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 22746280 - 22746501
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || ||| |||        ||| ||| ||    
T  22746280 aaaaagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgata 22746379  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||| |||||||||||||||   |||||||| ||||||||||||        || ||||||| || |||||  ||||||||    
T  22746380 ttcaaaatcattcaaatttcgaatgattgtttaataaattgaattttgatggattttgtggga--------tgtaattttaacaagaaaaactctttcat 22746471  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| || |||||||||| ||||||||||    
T  22746472 gaaaagataagatttcttaagattgttttt 22746501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 317 - 471
Target Start/End: Complemental strand, 1461357 - 1461203
Alignment:
Q  317 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattca 416  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| |||        ||| | | ||||||    
T  1461357 agtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattca 1461258  T
Q  417 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgt 471  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  1461257 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 1461203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 21146956 - 21147081
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||   |||| |||||||    
T  21146956 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaaaaaaag 21147055  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  21147056 tcttgtgttattcaatcaagattctt 21147081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 313 - 460
Target Start/End: Original strand, 37013897 - 37014044
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||        ||| | ||||    
T  37013897 aaaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggta 37013996  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 460  Q
    ||||||||||||||||||||||||| |||||||||||||  |||||||    
T  37013997 ttcaaaatcattcaaatttcgaagggttgtttaataaattggattttg 37014044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 262 - 386
Target Start/End: Complemental strand, 33656359 - 33656235
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    |||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||    
T  33656359 gggtgtattggatcatgattttaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagt 33656260  T
Q  362 cttgaggtattcaatcaagactctt 386  Q
    |||| | ||||||||||||| ||||    
T  33656259 cttgtgttattcaatcaagattctt 33656235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 357 - 542
Target Start/End: Original strand, 39852372 - 39852557
Alignment:
Q  357 aaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagat 456  Q
    |||||||||||||||||||||||||||  | |||  ||        ||| ||||||||||||||||||||||||||||||||||||||| |||||  |||    
T  39852372 aaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggat 39852471  T
Q  457 tttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    |||||| |||||| ||||||||| ||||| ||||||| || ||||| |||||||||||||| ||||||||||||  ||||||||||    
T  39852472 tttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 39852557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 263 - 390
Target Start/End: Complemental strand, 16894174 - 16894048
Alignment:
Q  263 ggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtc 362  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| | |||||   |||| |||||||||    
T  16894174 ggtgtattggatcataattctaagggattttaaaagacttttttatcat-aaaaattcttgtggtattcaatcaaaattctttccaatttaaaaaaagtc 16894076  T
Q  363 ttgaggtattcaatcaagactcttaatc 390  Q
    ||| ||||||||||||||||||||||||    
T  16894075 ttgtggtattcaatcaagactcttaatc 16894048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 324 - 543
Target Start/End: Original strand, 9689654 - 9689870
Alignment:
Q  324 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcat 423  Q
    ||||||||||||||||||||| ||||||| ||||||   | | |||||||||||||||||||| ||| |||        ||| |||||||| ||||||||    
T  9689654 tggtattcaatcaagactctt-gtcatttaaaaaaaca-tcgtggtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatcat 9689751  T
Q  424 tcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgag 523  Q
    | |||||||||| |||||||| |||||| |||||||||| |||| |||| |||||||| || ||||||||  ||||||| ||||||||| ||||||| ||    
T  9689752 t-aaatttcgaatgattgtttgataaattagattttgatggattgtgtgagattttcttgtaaaattttattatgaaaaagtctttcataaaaacataag 9689850  T
Q  524 atttcttaggattgtttttt 543  Q
    |||||||| |||||||||||    
T  9689851 atttcttatgattgtttttt 9689870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 261 - 386
Target Start/End: Complemental strand, 32158216 - 32158090
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttt--aaaaa 358  Q
    ||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||  |||||    
T  32158216 ggggtatattgaatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt-tcaatttaaaaaaa 32158118  T
Q  359 agtcttgaggtattcaatcaagactctt 386  Q
    ||||||| | ||||||||||||| ||||    
T  32158117 agtcttgtgttattcaatcaagattctt 32158090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 258 - 386
Target Start/End: Original strand, 37013800 - 37013928
Alignment:
Q  258 agaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaa 357  Q
    |||||| |||||||||| ||||||||| | |||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  | || ||||    
T  37013800 agagggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaa 37013899  T
Q  358 aagtcttgaggtattcaatcaagactctt 386  Q
    |||||||| ||||||||||||||||||||    
T  37013900 aagtcttgtggtattcaatcaagactctt 37013928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 251 - 386
Target Start/End: Complemental strand, 27459276 - 27459141
Alignment:
Q  251 acaactaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcat 350  Q
    |||| ||||| |||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||| || ||||||||||||||||||||   ||    
T  27459276 acaattaagaagggtgtattggatcatgattctaacggattttaaaaaacttttttatcatgaaaaagtctcgtagtattcaatcaagactctttccaat 27459177  T
Q  351 tttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    || |||||||||||| | |||||||| |||| ||||    
T  27459176 ttaaaaaaagtcttgtgttattcaattaagattctt 27459141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 313 - 543
Target Start/End: Complemental strand, 9220930 - 9220710
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||| | || ||||||||||| ||||||||||||||  ||||||||||| | |||||||||||||||||| ||| |||        |||  || ||    
T  9220930 aaaaagtcatatgatattcaatcaaaactctttgtcatttagaaaaagtcttgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgata 9220831  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||| |||||||||||||| |||          |||| ||||| ||||||| |||| |||||||| || ||||| ||||||| |    
T  9220830 ttcaaaatcattcaaatttctaaggattgtttaatgaat----------tagaatttgtaggattttatagtaaaattttaacacgaaaaagtctttcgt 9220741  T
Q  513 gaaaacatgagatttcttaggattgtttttt 543  Q
    |||||||||| ||||||||||||||||||||    
T  9220740 gaaaacatgatatttcttaggattgtttttt 9220710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 4550570 - 4550449
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  | || |||||||||||    
T  4550570 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 4550471  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  4550470 gtggtattcaatcaagactctt 4550449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 14000418 - 14000297
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||| |||||| ||||    
T  14000418 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaaatctt 14000319  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  14000318 gtggtattcaatcaagactctt 14000297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 262 - 386
Target Start/End: Original strand, 6460682 - 6460806
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    |||||||||| ||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||   | || ||||||||    
T  6460682 gggtgtattgaatcatgattctaagggattttaaaagatttttttataatgaaaaagtcttgtggtattcaatcaagactctttccaacttaaaaaaagt 6460781  T
Q  362 cttgaggtattcaatcaagactctt 386  Q
    |||  | ||||||||||||| ||||    
T  6460782 cttatgttattcaatcaagattctt 6460806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 261 - 343
Target Start/End: Original strand, 43319135 - 43319218
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagactttt-ttatcatgaaaaagtcttgtggtattcaatcaagactct 343  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43319135 ggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactct 43319218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 264 - 381
Target Start/End: Complemental strand, 5273276 - 5273158
Alignment:
Q  264 gtgtattggatcatgattctaagggattttcaaagacttttttatcatga-aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtc 362  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||| |||||   |||| |||||||||    
T  5273276 gtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaaaatcttgtggtattcaatcaagattctttccaatttaaaaaaagtc 5273177  T
Q  363 ttgaggtattcaatcaaga 381  Q
    ||| | |||||||||||||    
T  5273176 ttgtgttattcaatcaaga 5273158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 264 - 386
Target Start/End: Original strand, 9689553 - 9689674
Alignment:
Q  264 gtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtct 363  Q
    ||||||||||| |||||||||||||||||| | ||||||||| || ||||||||||||||||||||||||||||||||||||   | || ||| |||||     
T  9689553 gtgtattggattatgattctaagggattttaatagacttttt-attatgaaaaagtcttgtggtattcaatcaagactctttccaacttaaaagaagtcg 9689651  T
Q  364 tgaggtattcaatcaagactctt 386  Q
    |  ||||||||||||||||||||    
T  9689652 tctggtattcaatcaagactctt 9689674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 4240765 - 4240644
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| | |||||| ||||||||||| || |||||||||| ||||||||||||||||||||| ||||  | || |||||| ||||    
T  4240765 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaaatctt 4240666  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  4240665 gtggtattcaatcaagactctt 4240644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 40014012 - 40013894
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||  |||||||| ||||| ||||| || |||||||||||||||| ||||||||||||||| ||||  |||| |||||||||||    
T  40014012 tgtattggattaggattct--gggattttaaaaga-tttttaattatgaaaaagtcttgtgatattcaatcaagactttttgcaatttaaaaaaagtctt 40013916  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  40013915 gtggtattcaatcaagactctt 40013894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 1152416 - 1152295
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| | |||||| ||||||||||| || |||||||| |||||||||||| |||||||| | ||||  | || |||||||||||    
T  1152416 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtatttaatcaagattttttgcaacttaaaaaaagtctt 1152317  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  1152316 gtggtattcaatcaagactctt 1152295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 256 - 386
Target Start/End: Original strand, 5948993 - 5949123
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||| ||| |||||| | ||||||| |||||||| |||||| |||| || |||||||| | ||||||||||||||||| ||| ||||  | || ||    
T  5948993 taagggggatgtgttggattaggattctatgggattttaaaagaccttttaattatgaaaaatttttgtggtattcaatcaaaactttttgcaacttaaa 5949092  T
Q  356 aaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||| ||||||||||||||||||||    
T  5949093 aaaagtcttgtggtattcaatcaagactctt 5949123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 265 - 374
Target Start/End: Complemental strand, 7948630 - 7948521
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | |||||||  ||||||| |||||||||||||| |||||||||||| ||||||||||||||||||| ||||  | || |||||||||||    
T  7948630 tgtattggattaggattctataggattttaaaagacttttttattatgaaaaagtctcgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 7948531  T
Q  365 gaggtattca 374  Q
    | | ||||||    
T  7948530 gtgatattca 7948521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 269 - 386
Target Start/End: Original strand, 13925828 - 13925945
Alignment:
Q  269 ttggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagg 368  Q
    |||||| | |||||||  ||||||| ||||| ||||| || ||||||||||||||||||||| |||||||||| ||||  | || |||||||| ||| ||    
T  13925828 ttggattaggattctataggattttaaaagattttttaattatgaaaaagtcttgtggtatttaatcaagactttttgcaacttaaaaaaagttttgtgg 13925927  T
Q  369 tattcaatcaagactctt 386  Q
    ||||||||||||||||||    
T  13925928 tattcaatcaagactctt 13925945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 22746190 - 22746311
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | |||||||  | ||||| ||||||||||| || |||||||||||||||||||||| || |||||| ||||  | || |||||||||||    
T  22746190 tgtattggattaggattctatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcgattaagactttttgcaacttaaaaaaagtctt 22746289  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||| ||||||    
T  22746290 gtggtattcaatcaaaactctt 22746311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 139191 - 139287
Alignment:
Q  290 ttttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||| |||||||||||||| ||||||||||||| | ||||||||||||||||||||   |||| |||||||| ||| | ||||||||||||| ||||    
T  139191 ttttaaaagacttttttataatgaaaaagtcttttagtattcaatcaagactcttttcaatttaaaaaaagttttgtgttattcaatcaagattctt 139287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 303 - 386
Target Start/End: Complemental strand, 14465501 - 14465419
Alignment:
Q  303 ttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||||||||||||||||||||||||| || |||||||   |||| ||||||||| || ||||||||||||||||||||    
T  14465501 ttttatcatgaaaaagtcttgtggtattcaattaaaactctttccaatttaaaaaaagtc-tggggtattcaatcaagactctt 14465419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 313 - 386
Target Start/End: Complemental strand, 5273184 - 5273111
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||||||||||| ||||||||||||| | |||||||||| |||||||||||| | ||||||||||||| ||||    
T  5273184 aaaaagtcttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaagattctt 5273111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 262 - 332
Target Start/End: Original strand, 27786210 - 27786280
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattca 332  Q
    ||||||||||||| | ||||  |||||||||| |||||||||||||| || ||||||||||||||||||||    
T  27786210 gggtgtattggattaagatttcaagggattttaaaagacttttttattataaaaaagtcttgtggtattca 27786280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 26795695 - 26795638
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||    
T  26795695 aagggattttaaaagacttttttattataaaaaaatcttgtggtattcaatcaagact 26795638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 307 - 363
Target Start/End: Original strand, 849166 - 849222
Alignment:
Q  307 atcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtct 363  Q
    ||||||||||||||||||||||||||||||||||||||  ||| || ||||||||||    
T  849166 atcatgaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtct 849222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 1511643 - 1511587
Alignment:
Q  287 ggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactct 343  Q
    ||||||| |||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  1511643 ggattttaaaagacatttttattatgaaaaagtcttgtggtgttcaatcaagactct 1511587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 26806759 - 26806702
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||||||| |||||||||||||| || ||||| ||||||| |||||||||||||||    
T  26806759 aagggattttaaaagacttttttattataaaaaaatcttgtgatattcaatcaagact 26806702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 9220889 - 9220837
Alignment:
Q  312 gaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||||||||    
T  9220889 gaaaaagtcttgtgatattcaatcaagactctttatcacttaaaaaaagtctt 9220837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 28594528 - 28594449
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    |||||||||| |||   |||| |||| |||||| |||||||||||| || || |||||||||||||||||||||||||||    
T  28594528 ggggtgtatttgattgggattttaagagattttaaaagactttttttattataaaaaagtcttgtggtattcaatcaaga 28594449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 26806638 - 26806581
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||| ||||| ||| ||||||| || || |||||||||||||||||||||||||||||    
T  26806638 aaggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaagact 26806581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 315 - 375
Target Start/End: Original strand, 39852372 - 39852432
Alignment:
Q  315 aaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||| |||||||||||||||||  |  |||||| |||||||||||| |||||||||    
T  39852372 aaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaa 39852432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 1461319 - 1461257
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||| ||||||||||||||||| ||  ||| || |||||||||||| | |||||||    
T  1461319 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattcaa 1461257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 7947754 - 7947692
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||| ||||||||||||||||| ||  ||| || |||||||||||| | |||||||    
T  7947754 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaa 7947692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 14465408 - 14465346
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||| || |||||||||||||||||||||  ||  || |||||||||||| |||||||||    
T  14465408 aaaaagttttctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaa 14465346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 40410589 - 40410667
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    ||||||||||||||   ||||  || ||||||| |||||||||||| |  |  ||||||||||||||||||||||||||    
T  40410589 ggggtgtattggattgagatttcaatggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaga 40410667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 2276267 - 2276210
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||||||| |||| ||||||||| || ||||| | | |||||||||||||||||||    
T  2276267 aagggattttaaaagtcttttttataataaaaaaatttagtggtattcaatcaagact 2276210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 9689693 - 9689742
Alignment:
Q  323 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtatt 372  Q
    ||||||||||||||||||||||  ||| || |||||||||||| ||||||    
T  9689693 gtggtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatt 9689742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 26795574 - 26795521
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 337  Q
    |||| ||||| ||| ||||||| || || |||||||||||||||||||||||||    
T  26795574 aaggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaa 26795521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 382
Target Start/End: Original strand, 39753434 - 39753555
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||  |||||  || |||||||  |||||||||||   || ||||||| | ||||||||||||||||||| ||    | | |||||||     
T  39753434 ggggtgtattggattgtgatttcaacggattttagaagactttttttaaataaaaaagtttggtggtattcaatcaagacttttataaaatataaaaaaa 39753533  T
Q  361 tcttgaggtattcaatcaagac 382  Q
    ||||| | ||||||||||||||    
T  39753534 tcttgtgatattcaatcaagac 39753555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 301 - 341
Target Start/End: Original strand, 378272 - 378312
Alignment:
Q  301 ttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||||| || || ||||||||||||||||||||||||||    
T  378272 ttttttatgataaagaagtcttgtggtattcaatcaagact 378312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 17518453 - 17518505
Alignment:
Q  287 ggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    ||||||| |||||||||||  |  | |||||||||||||||||||||||||||    
T  17518453 ggattttaaaagactttttcgttttaaaaaagtcttgtggtattcaatcaaga 17518505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 261 - 562
Target Start/End: Complemental strand, 39171 - 38872
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||    
T  39171 ggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattctttatcatttaaaaaaag 39072  T
Q  361 tcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 460  Q
    ||||| |||||||||| ||||||||||||| |||        ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39071 tcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagattttg 38972  T
Q  461 atagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgtttttttcttcttaagattttac 560  Q
    || ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  38971 atggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattgtt-ttttctt-ttaagattttac 38874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 130)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 262 - 562
Target Start/End: Complemental strand, 39219651 - 39219352
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa-g 360  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||| |||||| |    
T  39219651 gggtgtattggatcataattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaag 39219552  T
Q  361 tcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 460  Q
    ||||| | |||||||||||||||||||||| |||        |||| |||||||||||||||||||||||| || | |||||||||||||||||||||||    
T  39219551 tcttgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattcaaaatcattcaaattttgatg-attgtttaataaatcagattttg 39219453  T
Q  461 atagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgtttttttcttcttaagattttac 560  Q
    || ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  39219452 atggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttctt-ttaagattttac 39219354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 40996872 - 40996624
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||| ||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||        ||||||||||    
T  40996872 aaaaagtctcgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggta 40996773  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||    
T  40996772 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcat 40996673  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40996672 gaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 40996624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 43581313 - 43581065
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||||||||||  ||||||||||||||||||||||| |||        ||||||||||    
T  43581313 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 43581214  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43581213 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 43581114  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  43581113 gaaaacatgagatttcttaggattatttttttctt-ttaagattttacta 43581065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 973168 - 973416
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||| ||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        | ||||||||    
T  973168 aaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggta 973267  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  973268 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcat 973367  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  973368 gaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 973416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 30440780 - 30441028
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||| ||||| |||||||||||||||||||||||| |||        ||||||||||    
T  30440780 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 30440879  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| |    
T  30440880 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgt 30440979  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30440980 gaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 30441028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 313 - 559
Target Start/End: Complemental strand, 7719483 - 7719238
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||| | | |||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  7719483 aaaaagtcttgtgttattcaatcaatattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggta 7719384  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7719383 ttcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 7719284  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagatttta 559  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  7719283 gaaaacatgagatttcttaggattgtttttttctt-ttaagatttta 7719238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 18914958 - 18914710
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||| | |||||||| ||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  18914958 aaaaagtcttgtgttattcaatcaaaattctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 18914859  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18914858 ttcaaaatcattcaaatttcaaaggtttgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 18914759  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18914758 gaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 18914710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 34695257 - 34695505
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| || ||||||||| |||||||| ||| |||||||||||||||||||||||| |||        || |||||||    
T  34695257 aaaaagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggta 34695356  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34695357 ttcaaaaccattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 34695456  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34695457 gaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 34695505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 47914250 - 47914498
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||||||| || |||||||||||||||||||||||| |||        ||||||| ||    
T  47914250 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgata 47914349  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  47914350 ttcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 47914449  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  47914450 gaaaacatgagatttcttaagattgtttttttctt-ttaagattttacta 47914498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 313 - 559
Target Start/End: Complemental strand, 44343619 - 44343374
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| | |||||||||||||||||||||| |||        | ||||||||    
T  44343619 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggta 44343520  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||     
T  44343519 tttaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcac 44343420  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagatttta 559  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  44343419 gaaaacatgagatttcttaggattgtttttttctt-ttaagatttta 44343374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 47879152 - 47879400
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||||||| || |||||||||||||||||||||||| |||        ||||||| ||    
T  47879152 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgata 47879251  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||    
T  47879252 ttcaaaatcattcaaatttaaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcat 47879351  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  47879352 gaaaacatgagatttcttaagattgtttttttctt-ttaagattttacta 47879400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 313 - 544
Target Start/End: Original strand, 12893392 - 12893623
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||| ||||||||||||||||| |||        |||| |||||    
T  12893392 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggta 12893491  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  12893492 ttcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcat 12893591  T
Q  513 gaaaacatgagatttcttaggattgttttttt 544  Q
    ||||||||||||||||||||||||||||||||    
T  12893592 gaaaacatgagatttcttaggattgttttttt 12893623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 34008996 - 34009245
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttc-tagtggt 411  Q
    ||||||||||||| ||||||||||||| | |||||||||| |||||||||||| ||||||||||||| |||||||||| |||        || |||||||    
T  34008996 aaaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggt 34009095  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca 511  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| | |||||||||||| |||| ||||||||    
T  34009096 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctaataaaattttagcataaaaaagtctttca 34009195  T
Q  512 tgaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
     ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34009196 agaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 34009245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 20275486 - 20275238
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||| | ||||||||||||| || ||||||||| |||||||||||  |||||||||||||||||||||||| |||        |||  |||||    
T  20275486 aaaaagtcttgggttattcaatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggta 20275387  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||| ||||    
T  20275386 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcat 20275287  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||| ||||||||||||||| |||||||||||||| ||||||||||||||    
T  20275286 gaaagcatgagatttcttagcattgtttttttctt-ttaagattttacta 20275238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 7718549 - 7718355
Alignment:
Q  349 attttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaata 448  Q
    |||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||||||||||||||||||||||||||||||||||||||    
T  7718549 atttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaata 7718450  T
Q  449 aatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgtttttt 543  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  7718449 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgtttttt 7718355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 23101275 - 23101504
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  23101275 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 23101374  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  23101375 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 23101474  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  23101475 gaaaagatgagatttcttgagattgttttt 23101504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 10068443 - 10068673
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt-gaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggt 411  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||| | || ||| |||        ||| |||||    
T  10068443 aaaaagtcttgtggtatttaatcaagactctttgccattttaaaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggt 10068542  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca 511  Q
    |||||||||||||||||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||    
T  10068543 attcaaaatcattcaaattttgaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttca 10068642  T
Q  512 tgaaaacatgagatttcttaggattgttttt 542  Q
    | |||||||||||||| ||||||||||||||    
T  10068643 taaaaacatgagatttgttaggattgttttt 10068673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 28342324 - 28342553
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||  ||        ||| ||||||    
T  28342324 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggta 28342423  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  28342424 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 28342523  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  28342524 gaaaagatgagatttcttgagattgttttt 28342553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 39784076 - 39784305
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  39784076 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 39784175  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  39784176 ttcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 39784275  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  39784276 gaaaagatgagatttcttgagattgttttt 39784305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 3022903 - 3023132
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | || ||| |||        ||| ||||||    
T  3022903 aaaaagtcttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggta 3023002  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| || ||||||    
T  3023003 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcat 3023102  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  3023103 gaaaagatgagatttcttgagattgttttt 3023132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 313 - 530
Target Start/End: Complemental strand, 29614987 - 29614770
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||| ||    
T  29614987 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgata 29614888  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  29614887 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 29614788  T
Q  513 gaaaacatgagatttctt 530  Q
    ||||| ||||||||||||    
T  29614787 gaaaagatgagatttctt 29614770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 321 - 542
Target Start/End: Original strand, 18838374 - 18838595
Alignment:
Q  321 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaat 420  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||        ||| ||||||||||||||    
T  18838374 ttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaat 18838473  T
Q  421 cattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacat 520  Q
    ||||||||||||||| |||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| || ||||||||||| ||    
T  18838474 cattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 18838573  T
Q  521 gagatttcttaggattgttttt 542  Q
    ||||||||||  ||||||||||    
T  18838574 gagatttcttgagattgttttt 18838595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 313 - 559
Target Start/End: Complemental strand, 32143142 - 32142895
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt--tctagtgg 410  Q
    ||||||||||||| |||||||| ||   | |||||||||| |||||||||||  |||||| ||||||||||||||||| |||          ||  ||||    
T  32143142 aaaaagtcttgtgttattcaataaattttttttgtcatttaaaaaaagtcttatggtattgaatcaagactcttaatcacttcaaaaaaaagtcacgtgg 32143043  T
Q  411 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttc 510  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |    
T  32143042 tattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttcc 32142943  T
Q  511 atgaaaacatgagatttcttaggattgtttttttcttcttaagatttta 559  Q
    || |||||||||||||||||| ||||||||||||||| |||||||||||    
T  32142942 ataaaaacatgagatttcttaagattgtttttttctt-ttaagatttta 32142895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 7113440 - 7113684
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| |||||||| |||| | ||| |||||| |||||||| ||| ||||||||||    ||| |||||| |||        || |||||||    
T  7113440 aaaaagtcttgtgttattcaattaagattttttatcatttaaaaaaagttttgtggtattcaat----acttttaatcacttaaaaaaagtccagtggta 7113535  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  7113536 ttcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagtctttcat 7113635  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  7113636 gaaaacatgaaatttcttaggattgtttttttctt-ttaggattttacta 7113684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 9882459 - 9882231
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  9882459 aaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 9882360  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||||||||| ||||| |||||||  | ||||| |||||||||    
T  9882359 ttcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat 9882260  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
     |||| ||||||||||||  ||||||||||    
T  9882259 -aaaaaatgagatttcttgagattgttttt 9882231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 28035028 - 28034799
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| || ||| |||        ||| ||||||    
T  28035028 aaaaagtcttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 28034929  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||| ||||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| ||  |||| |||||||||    
T  28034928 ttcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcat 28034829  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  28034828 gaaaagatgagatttcttgagattgttttt 28034799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 33382614 - 33382843
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        |||  |||||    
T  33382614 aaaaagccttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggta 33382713  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||| ||    
T  33382714 ttcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttat 33382813  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||| ||  ||||||||||    
T  33382814 gaaaagatgagatttatttagattgttttt 33382843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 313 - 509
Target Start/End: Original strand, 12963678 - 12963874
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | || ||  |||        ||| ||||||    
T  12963678 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagatttttcattacttaaaaaaagtctcgtggta 12963777  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtcttt 509  Q
    | ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| | ||||| ||||||    
T  12963778 tccaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaaaagtcttt 12963874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 253 - 507
Target Start/End: Original strand, 43679351 - 43679592
Alignment:
Q  253 aactaagaggggtgtattggatcatgattctaagggattttcaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttgtcatt 351  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||   |||    
T  43679351 aactaagagggatgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatt 43679450  T
Q  352 ttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 451  Q
    ||||||||              ||||  |  |||||||| |||        || ||||||||||||||||||||||||||||||||||||||||||||||    
T  43679451 ttaaaaaa--------------aatcttgtgtcttaatcacttaaaaaaagtccagtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 43679536  T
Q  452 cagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtct 507  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  43679537 cagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 265 - 542
Target Start/End: Original strand, 509585 - 509852
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | |||| || |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  509585 tgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactatttgtcattttaaaaaagtctt 509684  T
Q  365 gaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatag 464  Q
    ||||||||||||||||||| || |||  ||        ||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||      
T  509685 gaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaacgattgtttaataaattggattttgat-- 509782  T
Q  465 attttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
            ||||||| |||||  |||||| || ||||| |||||||||||||| ||||||||||||  ||||||||||    
T  509783 --------ggattttgtagtgggattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 509852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 7993119 - 7993348
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| || ||| |||        |||  |||||    
T  7993119 aaaaagtctcgtggtattcaatcaagactctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggta 7993218  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||| |||| ||||||||||| ||||| ||||||| || ||||| |||||||||    
T  7993219 ttcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 7993318  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| || |||||||||  ||||||||||    
T  7993319 gaaaagataagatttcttgagattgttttt 7993348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 313 - 541
Target Start/End: Original strand, 12740350 - 12740577
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||| | || |||  ||        ||| ||||||    
T  12740350 aaaaagtcttgtggtattcaatcaagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggta 12740449  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || || || |||||||||    
T  12740450 ttcaaaatcattcaaatttcaaaggattgtttaataaatg-gattttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcat 12740548  T
Q  513 gaaaacatgagatttcttaggattgtttt 541  Q
     |||| ||||||||||||| |||||||||    
T  12740549 aaaaagatgagatttcttaagattgtttt 12740577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 3797280 - 3797061
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  3797280 aaaaagtcatctgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 3797181  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||| |||||| |||||| ||||||||||||||||||| |||||||||         |||||||||||||||||||||||||||||||| |||||| |     
T  3797180 ttcaagatcattaaaattttgaaggattgtttaataaattagattttga---------tgggattttctagtgaaattttagcatgaaaaagtcttttaa 3797090  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    |||||||| |||||||||||||||||||||    
T  3797089 gaaaacat-agatttcttaggattgttttt 3797061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 329 - 542
Target Start/End: Original strand, 8675326 - 8675539
Alignment:
Q  329 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaa 428  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| |||||||||||||||||| |||    
T  8675326 ttcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaa 8675425  T
Q  429 tttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttc 528  Q
     ||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||  ||||| ||||||| ||||||||||    
T  8675426 cttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttc 8675525  T
Q  529 ttaggattgttttt 542  Q
    ||  ||||||||||    
T  8675526 ttgagattgttttt 8675539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 313 - 541
Target Start/End: Original strand, 19251516 - 19251734
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | || ||| |||        ||| ||||||    
T  19251516 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggta 19251615  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||          ||||||||| ||||||||||||||  |||| |||||||||    
T  19251616 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgat----------ggattttcttgtgaaattttagcaataaaaagtctttcat 19251705  T
Q  513 gaaaacatgagatttcttaggattgtttt 541  Q
    |||||| ||| ||||||| ||||| ||||    
T  19251706 gaaaacctgaaatttcttgggattatttt 19251734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 321 - 471
Target Start/End: Complemental strand, 44122115 - 44121965
Alignment:
Q  321 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaat 420  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||||||||||    
T  44122115 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaat 44122016  T
Q  421 cattcaaatttcgaaggattgtttaataaatcagattttgatagattttgt 471  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  44122015 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 44121965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 280 - 493
Target Start/End: Complemental strand, 10676676 - 10676463
Alignment:
Q  280 ttctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 379  Q
    |||||||||||||| ||||||||||| || |||||||| |||||||||||| |||||||||||||||  |||| ||||| |||||| |||||||||||||    
T  10676676 ttctaagggattttaaaagactttttaattatgaaaaaatcttgtggtatttaatcaagactctttgcaatttaaaaaaggtcttgtggtattcaatcaa 10676577  T
Q  380 gactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggatttt 479  Q
    |||| || ||| |||        |||  | ||||||||||||||||||||||||||||||||||||||||||  ||||| ||| |||||| ||| |||||    
T  10676576 gacttttcatcacttaaaaaaagtctcattgtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttggatggattttatggaatttt 10676477  T
Q  480 ctagtgaaatttta 493  Q
    || |||||||||||    
T  10676476 cttgtgaaatttta 10676463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 34695121 - 34695246
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||   |||| |||||||    
T  34695121 ggggtgtattgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 34695220  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| ||||||||||||||||||||    
T  34695221 tcttgtggtattcaatcaagactctt 34695246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 313 - 471
Target Start/End: Original strand, 37327904 - 37328062
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  |||        ||| ||||||    
T  37327904 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggta 37328003  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgt 471  Q
    |||||||||||||||||||| ||||||||||||||||||   |||||||| ||||||||    
T  37328004 ttcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttgt 37328062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 261 - 386
Target Start/End: Complemental strand, 44343713 - 44343588
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||| |||||||    
T  44343713 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 44343614  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  44343613 tcttgtgttattcaatcaagattctt 44343588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 313 - 502
Target Start/End: Original strand, 32883759 - 32883948
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| || ||| |||        ||| ||||||    
T  32883759 aaaaagtcttatggtattcaatcaagactttttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggta 32883858  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaa 502  Q
    ||||||||||||||||||||||| ||||||||| |||||  ||||||||| ||||| |||||||||| ||||| ||||||| || |||||    
T  32883859 ttcaaaatcattcaaatttcgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaattttaacaagaaaa 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 327 - 542
Target Start/End: Original strand, 9179871 - 9180076
Alignment:
Q  327 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattca 426  Q
    ||||||||||||| |||||||||||| |||||||| |||  ||||||||||||||||||| ||| |||        ||| ||||||| |||||||| | |    
T  9179871 tattcaatcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcactta 9179970  T
Q  427 aatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatt 526  Q
    |||| ||||||||||||||||||||          | |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  9179971 aattccgaaggattgtttaataaat----------tggattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatt 9180060  T
Q  527 tcttaggattgttttt 542  Q
    ||||||||||||||||    
T  9180061 tcttaggattgttttt 9180076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 267 - 471
Target Start/End: Original strand, 29585446 - 29585649
Alignment:
Q  267 tattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttga 366  Q
    ||||| || ||||||||| | |||||| ||||| ||||| || |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  29585446 tattgaattatgattctacgagattttaaaagattttttaattatgaaaaagttttgtggtattcaatcaagattctttgtcattttaaaaaagtcttga 29585545  T
Q  367 ggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagat 466  Q
    ||||||||||||| ||| || ||| |||        |||  |||||||||||||||||||||||| ||||||||||||||||| |  ||||||||| |||    
T  29585546 ggtattcaatcaaaact-tttatcacttaaaaaaagtcttctggtattcaaaatcattcaaattttgaaggattgtttaataatttggattttgatggat 29585644  T
Q  467 tttgt 471  Q
    |||||    
T  29585645 tttgt 29585649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 313 - 518
Target Start/End: Original strand, 727496 - 727692
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt-tctagtggt 411  Q
    ||||||||||||| ||||||||||| | |||||||||||| |||||||||||| | ||||||||||| |||||| ||| |||         |||||| ||    
T  727496 aaaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaaaactctttatcacttaaaaaaaaatctagtagt 727595  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca 511  Q
    ||||||||||||||||||||| |||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||| ||||||||    
T  727596 attcaaaatcattcaaatttcaaaggattgtttaataaatcagat----------tttgtgggattttctagtgaaattttagcatgaaaaagtctttca 727685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 30440686 - 30440811
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||   |||| |||||||    
T  30440686 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaaag 30440785  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  30440786 tcttgtgttattcaatcaagattctt 30440811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 40460930 - 40460711
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||| |||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| || ||| |||        ||| ||||||    
T  40460930 aaaatgtcttgtgatattcaattaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 40460831  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||| |||||||||||||||  |||||||||          ||||||| ||||| ||||||| || |||||  ||||||||    
T  40460830 ttcaaaatcattcaaatttcgaatgattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaaatctttcat 40460741  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  40460740 gaaaatatgagatttcttgagattgttttt 40460711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 41827291 - 41827510
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| || ||  |||        ||| ||||||    
T  41827291 aaaaagtcttgtggtattcaatcaagactttttgtcattttaaaaaaatcttgaggtgttcaatcaagacttttcataacttaaaaaaagtcttgtggta 41827390  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||          | |||||||||||||||||||  ||||||||| |||||||||||||| | ||||| ||||||| || |||||||||||||||    
T  41827391 ttcaaaat----------ttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcat 41827480  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  41827481 gaaaatatgagatttcttgagattgttttt 41827510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 44256989 - 44256760
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||||| ||||| |||||||||| ||||||||||||||||| |||| |||||||||||||||||| || ||| |||        | | ||||||    
T  44256989 aaaaagtcttgtagtatttaatcaagactttttgtcattttaaaaaaatcttaaggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggta 44256890  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||| |||||||||||||||  ||||| |||  ||||||| |||||||  |||| ||||||| || ||||| || ||||||    
T  44256889 ttcaaaatcattcaaatttcgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtttttcat 44256790  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
     |||| ||||||||| ||  ||||||||||    
T  44256789 caaaatatgagattttttgagattgttttt 44256760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 313 - 469
Target Start/End: Original strand, 31638859 - 31639015
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||| | |||||||||||| |||||| |  || ||||||| |||||||||||||||| |||        ||||||||||    
T  31638859 aaaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaacttgtgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggta 31638958  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagatttt 469  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31638959 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 313 - 473
Target Start/End: Complemental strand, 46405654 - 46405494
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  46405654 aaaaaatcttgcggtattcaatcaagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 46405555  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgg 473  Q
    |||||||||||||||||||| || |||||||||||||||  ||||||||| ||||||||||    
T  46405554 ttcaaaatcattcaaatttcaaatgattgtttaataaattggattttgatggattttgtgg 46405494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 313 - 460
Target Start/End: Complemental strand, 17001246 - 17001099
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| || ||| |||        | | ||||||    
T  17001246 aaaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaataaagacttttcatcacttaaaaaaaatatcgtggta 17001147  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 460  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  17001146 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 17001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 261 - 379
Target Start/End: Complemental strand, 18915052 - 18914934
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  18915052 ggggtgtattggatcatgtatctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaag 18914953  T
Q  361 tcttgaggtattcaatcaa 379  Q
    ||||| | |||||||||||    
T  18914952 tcttgtgttattcaatcaa 18914934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 262 - 386
Target Start/End: Complemental strand, 43581406 - 43581282
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    |||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||    
T  43581406 gggtgtattggatcatgattctaaagaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 43581307  T
Q  362 cttgaggtattcaatcaagactctt 386  Q
    |||| | ||||||||||||| ||||    
T  43581306 cttgtgttattcaatcaagattctt 43581282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 265 - 460
Target Start/End: Original strand, 47066631 - 47066828
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaa-agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtct 363  Q
    |||||||||| | ||||||| |||||||  ||||||||||| || ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  47066631 tgtattggattaggattctatgggatttaaaaagactttttaattatgaaaaaagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtct 47066730  T
Q  364 tgaggtattcaatcaagactcttaatcgctt-nnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 460  Q
    ||| |||||||||||| |   || ||| |||         ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  47066731 tgacgtattcaatcaaaaaatttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 253 - 383
Target Start/End: Original strand, 29892998 - 29893128
Alignment:
Q  253 aactaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattt 352  Q
    ||||||| ||| |||||| ||| | ||||||| | |||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  29892998 aactaagggggatgtattagattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattt 29893097  T
Q  353 taaaaaagtcttgaggtattcaatcaagact 383  Q
    ||||| |||| ||||||||||||||||||||    
T  29893098 taaaacagtcatgaggtattcaatcaagact 29893128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 408 - 542
Target Start/End: Complemental strand, 43187485 - 43187351
Alignment:
Q  408 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtct 507  Q
    |||||||||||||||||||||||| |||| ||||||||||||||  |||||||||  ||||||| ||||||||||||||||||||| || ||||| ||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtct 43187386  T
Q  508 ttcatgaaaacatgagatttcttaggattgttttt 542  Q
    |||||||| ||||||||||| || |||||||||||    
T  43187385 ttcatgaagacatgagattttttgggattgttttt 43187351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 8078285 - 8078410
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||   |||||||||||     
T  8078285 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaaa 8078384  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
      ||| | ||||||||||||| ||||    
T  8078385 atttgtgttattcaatcaagattctt 8078410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 12893298 - 12893423
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||| ||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||   |||| |||||||    
T  12893298 ggggtgtattggatcatgattctaaggtattttaaaagatttttttttcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 12893397  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  12893398 tcttgtgttattcaatcaagattctt 12893423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 264 - 381
Target Start/End: Complemental strand, 20275577 - 20275460
Alignment:
Q  264 gtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtct 363  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||   |||| ||||||||||    
T  20275577 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaataagtcttgtggtattcaatcaagattctttccaatttaaaaaaagtct 20275478  T
Q  364 tgaggtattcaatcaaga 381  Q
    || | |||||||||||||    
T  20275477 tgggttattcaatcaaga 20275460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 313 - 471
Target Start/End: Original strand, 39028074 - 39028232
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||| |||        ||| ||| ||    
T  39028074 aaaaaatcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgtta 39028173  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgt 471  Q
    ||||||||| |||||||| |||| |||||||||||||||  ||||||||| ||||||||    
T  39028174 ttcaaaatcgttcaaattacgaaagattgtttaataaattggattttgatggattttgt 39028232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 262 - 386
Target Start/End: Original strand, 47879059 - 47879183
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    |||||||||| ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| |||||||   |||||||||||||    
T  47879059 gggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactcttttcaattttaaaaaagt 47879158  T
Q  362 cttgaggtattcaatcaagactctt 386  Q
    |||| | ||||||||||||| ||||    
T  47879159 cttgtgttattcaatcaagattctt 47879183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 262 - 386
Target Start/End: Original strand, 47914157 - 47914281
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    |||||||||| ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| |||||||   |||||||||||||    
T  47914157 gggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactcttttcaattttaaaaaagt 47914256  T
Q  362 cttgaggtattcaatcaagactctt 386  Q
    |||| | ||||||||||||| ||||    
T  47914257 cttgtgttattcaatcaagattctt 47914281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 263 - 376
Target Start/End: Complemental strand, 32143235 - 32143121
Alignment:
Q  263 ggtgtattggatcatgattctaagggattttcaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||    
T  32143235 ggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttctaatttaaaaaaagt 32143136  T
Q  362 cttgaggtattcaat 376  Q
    |||| | ||||||||    
T  32143135 cttgtgttattcaat 32143121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 262 - 386
Target Start/End: Original strand, 973074 - 973199
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagactttt-ttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    |||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||   |||| |||||||    
T  973074 gggtgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 973173  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    | ||| | ||||||||||||| ||||    
T  973174 ttttgtgttattcaatcaagattctt 973199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 29615077 - 29614956
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| ||||||||| | |||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||| |||||||||||    
T  29615077 tgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 29614978  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  29614977 gtggtattcaatcaagactctt 29614956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 262 - 379
Target Start/End: Original strand, 31638766 - 31638883
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||   |||| ||||||||    
T  31638766 gggtgtattgaatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtggtattcaatcaagactcttttcaatttaaaaaaagt 31638865  T
Q  362 cttgaggtattcaatcaa 379  Q
    |||| | |||||||||||    
T  31638866 cttgtgttattcaatcaa 31638883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 254 - 386
Target Start/End: Original strand, 28342223 - 28342355
Alignment:
Q  254 actaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttt 353  Q
    |||||| ||| |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||| | ||||  ||||     
T  28342223 actaagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttttgcaattta 28342322  T
Q  354 aaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||||| ||||||||||||||||||||    
T  28342323 aaaaaagtcttgtggtattcaatcaagactctt 28342355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 264 - 379
Target Start/End: Original strand, 727405 - 727520
Alignment:
Q  264 gtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtct 363  Q
    |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||   |||| ||||||||||    
T  727405 gtgtattggatcatgattctaatggattttaaatgacttttttatcatgaaaaagtcttgcggtattcaatcaagactcttttcaatttaaaaaaagtct 727504  T
Q  364 tgaggtattcaatcaa 379  Q
    || | |||||||||||    
T  727505 tgtgttattcaatcaa 727520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 261 - 381
Target Start/End: Original strand, 34008905 - 34009022
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||   ||||||||||||||||||||||   |||| |||||||    
T  34008905 ggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtc---tggtattcaatcaagactcttttcaatttaaaaaaag 34009001  T
Q  361 tcttgaggtattcaatcaaga 381  Q
    ||||| | |||||||||||||    
T  34009002 tcttgtgttattcaatcaaga 34009022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 325 - 451
Target Start/End: Complemental strand, 33892461 - 33892335
Alignment:
Q  325 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcatt 424  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||||||||||||||    
T  33892461 ggtattcaatcaacactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcatt 33892362  T
Q  425 caaatttcgaaggattgtttaataaat 451  Q
    ||||||||||| ||||||| |||||||    
T  33892361 caaatttcgaatgattgttaaataaat 33892335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 262 - 527
Target Start/End: Complemental strand, 44623548 - 44623295
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtctt-gtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||| | ||||  |||||||||| || || |||||||||| |||   ||||| ||| |||||||||||||||||||||||||| |||||||    
T  44623548 gggtgtattggattaagatttgaagggattttaaacgatttttttatcaagaa---gtctttgtgatattcaatcaagactctttgtcatttaaaaaaag 44623452  T
Q  361 tcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 460  Q
    ||||| |||||| ||||||||||||| ||| |||        ||| ||| |||||||||||||||| ||||| || || |||||||||||       |||    
T  44623451 tcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaatcattcatatttctaaagactgtttaataaa-------ttg 44623359  T
Q  461 atagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagattt 527  Q
    |   ||||||||| |||||||||||||||||||| ||||||| |||| |||| |||| |||| ||||    
T  44623358 a---attttgtggaattttctagtgaaattttagaatgaaaaagtctctcataaaaatatgatattt 44623295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 256 - 386
Target Start/End: Complemental strand, 9882558 - 9882428
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||||||| |||||||||| | |||||||  ||||||| ||||||||||| || ||||||||||||| |||||||||||||||||| ||||  |||| ||    
T  9882558 taagagggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaa 9882459  T
Q  356 aaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||| ||| ||||||||||||||||||||    
T  9882458 aaaagttttgtggtattcaatcaagactctt 9882428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 261 - 386
Target Start/End: Complemental strand, 40996967 - 40996841
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 359  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||| ||||||||| |||||||||||||||||||||||||||||   |||| ||||||    
T  40996967 ggggtgtattggatcatgattctaagggattttaaaatattttttttatcatgaaagagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 40996868  T
Q  360 gtcttgaggtattcaatcaagactctt 386  Q
    |||| | | ||||||||||||| ||||    
T  40996867 gtctcgtgttattcaatcaagattctt 40996841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 23101185 - 23101306
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    ||||| |||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||| | ||||  |||| |||||||||||    
T  23101185 tgtatcggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagaatttttgcaatttaaaaaaagtctt 23101284  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  23101285 gtggtattcaatcaagactctt 23101306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 39783986 - 39784107
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    ||||||||||   ||||||| |||||||| ||||||||||| || ||||||||||| |||||||||||||||||||| ||||  |||| |||||||||||    
T  39783986 tgtattggattgagattctatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 39784085  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  39784086 gtggtattcaatcaagactctt 39784107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 48117906 - 48117785
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| |  |||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  | || |||||||||||    
T  48117906 tgtattggattagtattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 48117807  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  48117806 gtggtattcaatcaagactctt 48117785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 411 - 542
Target Start/End: Original strand, 19810874 - 19810995
Alignment:
Q  411 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttc 510  Q
    |||||||||||||||||||||| || |||||||||||||||          | |||||||||| ||||||||||||||||||||||| ||||||||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaat----------tggattttgtggaattttctagtgaaattttagcataaaaatgtctttc 19810963  T
Q  511 atgaaaacatgagatttcttaggattgttttt 542  Q
    ||||||||||||||||||||  ||||||||||    
T  19810964 atgaaaacatgagatttcttgagattgttttt 19810995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 313 - 502
Target Start/End: Original strand, 25805669 - 25805858
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||| |||||||| |||||||||||| ||||||| |||| |||||| ||| | ||||||||||||| | | || ||| |||          | ||||||    
T  25805669 aaaaaatcttgtggcattcaatcaagattctttgtaatttaaaaaaaatctagtggtattcaatcaaaatttttcatcacttaaaaaaaaatttgtggta 25805768  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaa 502  Q
    ||||||||||||||||||||| |||||||||||||||||   ||| |||| ||||||||||||||||||| | |||||||||||||||||    
T  25805769 ttcaaaatcattcaaatttcgtaggattgtttaataaattgaattatgatggattttgtgggattttctaataaaattttagcatgaaaa 25805858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 255 - 386
Target Start/End: Complemental strand, 43187666 - 43187535
Alignment:
Q  255 ctaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttta 354  Q
    ||||| ||| |||||||||||   |||||||| |||||| ||||||||||| || |||||| ||||||||||||||||||||||||||||||| |||| |    
T  43187666 ctaagggggatgtattggatcgaaattctaagagattttaaaagactttttaattatgaaagagtcttgtggtattcaatcaagactctttgtaatttaa 43187567  T
Q  355 aaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||||||||  |||||||||| || ||||||    
T  43187566 aaaaagtcttatggtattcaattaaaactctt 43187535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 407 - 560
Target Start/End: Complemental strand, 1470362 - 1470213
Alignment:
Q  407 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtc 506  Q
    ||||||||||||||| |||||||||  ||| |||||||||| ||| |||||||||||| ||||||||||||||||  | |||||||||||||||||  ||    
T  1470362 gtggtattcaaaatcgttcaaattttaaagcattgtttaatgaattagattttgatag-ttttgtgggattttctgataaaattttagcatgaaaaaatc 1470264  T
Q  507 tttcatgaaaacatgagatttcttaggattgtttttttcttcttaagattttac 560  Q
    |||  |||||||  |||||||| ||| |||||||||||||| ||||||||||||    
T  1470263 ttttttgaaaac--gagatttcctagcattgtttttttctt-ttaagattttac 1470213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 256 - 386
Target Start/End: Original strand, 10068344 - 10068474
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||| |||||||||  |||||||| | ||||||| ||||||||||| || |||||||||||||||| ||||||||||| ||||||||  |||| ||    
T  10068344 taagggggatgtattggaatatgattctgatggattttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaaaactctttgcaatttaaa 10068443  T
Q  356 aaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||| |||||| |||||||||||||    
T  10068444 aaaagtcttgtggtatttaatcaagactctt 10068474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 256 - 386
Target Start/End: Complemental strand, 17001345 - 17001215
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||| |||||||||| | ||||||| | |||||| ||| ||||||| || |||||||||||||||||||||||||||||||| ||||  | || ||    
T  17001345 taagggggatgtattggattaggattctatgagattttaaaaaactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaa 17001246  T
Q  356 aaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||| ||||||||||||||||||||    
T  17001245 aaaagtcttgtggtattcaatcaagactctt 17001215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 7993029 - 7993150
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | |||||||  ||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  | || ||||||||||     
T  7993029 tgtattggattaagattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctc 7993128  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  7993129 gtggtattcaatcaagactctt 7993150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 37327814 - 37327935
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    ||||| |||| | ||||| | |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  | || |||||||||||    
T  37327814 tgtataggattaagattcaatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 37327913  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  37327914 gtggtattcaatcaagactctt 37327935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 278 - 386
Target Start/End: Original strand, 19251439 - 19251547
Alignment:
Q  278 gattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatc 377  Q
    ||||||||| |||||| ||||||||||| || | ||||||||||||| |||||||||||||||||||||  | || |||||||||||| |||||||||||    
T  19251439 gattctaagagattttaaaagactttttaattacgaaaaagtcttgtagtattcaatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatc 19251538  T
Q  378 aagactctt 386  Q
    |||||||||    
T  19251539 aagactctt 19251547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 422 - 542
Target Start/End: Complemental strand, 37972981 - 37972861
Alignment:
Q  422 attcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatg 521  Q
    ||||||||||||||||||| ||||||||||  ||||||||| ||||||| |||||||| ||||| ||||||| || ||||| |||||||||||||| |||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  522 agatttcttaggattgttttt 542  Q
    ||| |||||  ||||||||||    
T  37972881 agacttcttgagattgttttt 37972861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 265 - 379
Target Start/End: Complemental strand, 7719574 - 7719459
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatc-aagactctttgtcattttaaaaaagtct 363  Q
    ||||||||||||||||| |||  |||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||   |||| ||||||||||    
T  7719574 tgtattggatcatgattgtaaaagattttaaaagacttttttatcatgaaaaattcttgtggtattcaatcaaagactctttccaatttaaaaaaagtct 7719475  T
Q  364 tgaggtattcaatcaa 379  Q
    || | |||||||||||    
T  7719474 tgtgttattcaatcaa 7719459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 313 - 383
Target Start/End: Complemental strand, 48117816 - 48117746
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 383  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  48117816 aaaaagtcttgtggtattcaatcaagactctttgtcatttttgaaaagtcttgaggtattcaatcaagact 48117746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 12963589 - 12963709
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| | |||||| ||||||||||| || | ||||||||||||||||| |||||||||||||||||  | || |||||||||||    
T  12963589 tgtattggattaggattcta-gagattttaaaagactttttaattacgaaaaagtcttgtggtactcaatcaagactctttgcaacttaaaaaaagtctt 12963687  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  12963688 gtggtattcaatcaagactctt 12963709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 267 - 386
Target Start/End: Complemental strand, 46405742 - 46405623
Alignment:
Q  267 tattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttga 366  Q
    |||||||| | ||||||| || ||||| ||||||||||| || ||||||||||| |||||||||||||||||||| ||||  | || |||||| |||||     
T  46405742 tattggattaggattctatggaattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgc 46405643  T
Q  367 ggtattcaatcaagactctt 386  Q
    ||||||||||||||||||||    
T  46405642 ggtattcaatcaagactctt 46405623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 256 - 386
Target Start/End: Original strand, 18838267 - 18838397
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||| |||||||||| | ||||||| |||||| | ||||||||||| || ||||||| |||||||||||||||||||||||| ||||  | || ||    
T  18838267 taagggggatgtattggattaggattctatgggattataaaagactttttaattatgaaaatgtcttgtggtattcaatcaagactttttgcaacttaaa 18838366  T
Q  356 aaaagtcttgaggtattcaatcaagactctt 386  Q
    |||| | ||| ||||||||||||||||||||    
T  18838367 aaaaatattgtggtattcaatcaagactctt 18838397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 260 - 386
Target Start/End: Original strand, 39027979 - 39028105
Alignment:
Q  260 aggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 359  Q
    |||| |||||||||| | |||| ||  | ||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  | || ||||||    
T  39027979 agggatgtattggattaggattttatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 39028078  T
Q  360 gtcttgaggtattcaatcaagactctt 386  Q
     ||||| ||||||||||||||||||||    
T  39028079 atcttgtggtattcaatcaagactctt 39028105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 265 - 383
Target Start/End: Original strand, 41827201 - 41827319
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| |  ||| || |||||||| ||||||||||| || |||||||||||||||||||||||||||||| | ||||  | || |||||||||||    
T  41827201 tgtattggattagaattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagaatttttgcaacttaaaaaaagtctt 41827300  T
Q  365 gaggtattcaatcaagact 383  Q
    | |||||||||||||||||    
T  41827301 gtggtattcaatcaagact 41827319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 33382524 - 33382645
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||| ||| | ||||||| | |||||| ||||||||||| || ||||||||||||| |||||||||||||||||| ||||  | || ||||||| |||    
T  33382524 tgtattagattaggattctatgagattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaacttaaaaaaagcctt 33382623  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  33382624 gtggtattcaatcaagactctt 33382645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 256 - 386
Target Start/End: Complemental strand, 3797379 - 3797249
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||| |||||| ||| |||||||||| | ||||| ||||||||||| || |||||| ||| ||| ||||||||||||||||||||||  |||| ||    
T  3797379 taagggggatgtattagattatgattctaatgaattttaaaagactttttaattatgaaatagttttgaggtattcaatcaagactctttgcaatttaaa 3797280  T
Q  356 aaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||||| |  | ||||||||||||||||||    
T  3797279 aaaagtcatctgatattcaatcaagactctt 3797249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 261 - 381
Target Start/End: Original strand, 7113343 - 7113466
Alignment:
Q  261 ggggtgtattggatca---tgattctaagggattttcaaagac-ttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaa 356  Q
    ||||||||||||||||   ||||||||||||||||| |||||| ||||||||||||| ||||| || ||||||||||||||||||||||   |||| |||    
T  7113343 ggggtgtattggatcatcatgattctaagggattttaaaagactttttttatcatgacaaagtatt-tggtattcaatcaagactctttccaatttaaaa 7113441  T
Q  357 aaagtcttgaggtattcaatcaaga 381  Q
    ||||||||| | |||||||| ||||    
T  7113442 aaagtcttgtgttattcaattaaga 7113466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 265 - 383
Target Start/End: Original strand, 32883668 - 32883787
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatc-aagactctttgtcattttaaaaaagtct 363  Q
    |||||||||| ||||||||| |||||||| ||||| ||||| || |||||||||| ||||| ||||||||| |||||| ||||  | || ||||||||||    
T  32883668 tgtattggattatgattctatgggattttaaaagattttttaattatgaaaaagttttgtgatattcaatctaagactttttgcaacttaaaaaaagtct 32883767  T
Q  364 tgaggtattcaatcaagact 383  Q
    |  |||||||||||||||||    
T  32883768 tatggtattcaatcaagact 32883787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 265 - 383
Target Start/End: Original strand, 3022813 - 3022931
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    ||||||| || | ||||||| |||||||| ||||| ||||| || |||||||||| || ||||||| |||||||||| |||   | || |||||||||||    
T  3022813 tgtattgaattaggattctatgggattttaaaagattttttaattatgaaaaagttttatggtatttaatcaagactttttaaaacttaaaaaaagtctt 3022912  T
Q  365 gaggtattcaatcaagact 383  Q
    | |||||||||||||||||    
T  3022913 gtggtattcaatcaagact 3022931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 21067760 - 21067850
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttg 346  Q
    |||| ||| |||||||||| | ||||||| | |||||| ||||| ||||| || |||||||||||||||||||||||||||||||| ||||    
T  21067760 taagggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttg 21067850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 288 - 386
Target Start/End: Complemental strand, 40460997 - 40460899
Alignment:
Q  288 gattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||| ||||||||||| || |||||||||| |||||||||| |||||||||| ||||  |||| ||||| |||||| | |||||||| |||||||||    
T  40460997 gattttaaaagactttttaattatgaaaaagttttgtggtatttaatcaagactttttgcaatttaaaaaatgtcttgtgatattcaattaagactctt 40460899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 34695215 - 34695283
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 381  Q
    |||||||||||||||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  34695215 aaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 34695283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 269 - 383
Target Start/End: Complemental strand, 28035114 - 28035000
Alignment:
Q  269 ttggatcatgattctaagggattttcaaagactttttta-tcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 367  Q
    |||||| | ||||||| || ||||| ||||||||||||| | || ||||||| |||||||||||||| |||| | |||| ||  |||||||||||||| |    
T  28035114 ttggattaggattctatggaattttaaaagacttttttaattattaaaaagttttgtggtattcaattaagattttttg-caacttaaaaaagtcttgtg 28035016  T
Q  368 gtattcaatcaagact 383  Q
    ||||||||||||||||    
T  28035015 gtattcaatcaagact 28035000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 31401586 - 31401645
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtc 320  Q
    ||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||||||    
T  31401586 ggggtgtattggatcatgattctaaagaactttaaaagacttttttatcatgaaaaagtc 31401645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 8078387 - 8078457
Alignment:
Q  321 ttgtggtattcaatcaagactctttgtcattttaaaaa-agtcttgaggtattcaatcaagactcttaatc 390  Q
    ||||| ||||||||||||| |||||||||||| ||||| | ||||| ||||||||||||||||||||||||    
T  8078387 ttgtgttattcaatcaagattctttgtcatttaaaaaagaatcttgtggtattcaatcaagactcttaatc 8078457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 261 - 331
Target Start/End: Original strand, 9179766 - 9179836
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattc 331  Q
    |||||||||||||| |  |||||||  |||||| ||||||||||||||||||||||||||||||| |||||    
T  9179766 ggggtgtattggattagcattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtgatattc 9179836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 260 - 341
Target Start/End: Complemental strand, 37973092 - 37973011
Alignment:
Q  260 aggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||| |||||||||| | ||||||| | |||||| ||| ||||||| || |||||| |||||||||||||||||||||||||    
T  37973092 agggatgtattggattaggattctatgagattttaaaatactttttaattatgaaagagtcttgtggtattcaatcaagact 37973011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #107
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 285 - 341
Target Start/End: Original strand, 3634236 - 3634292
Alignment:
Q  285 agggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    ||||||||| |||||||||||||| || ||||||||||||| |||||||||||||||    
T  3634236 agggattttaaaagacttttttattataaaaaagtcttgtgatattcaatcaagact 3634292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #108
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 278 - 386
Target Start/End: Original strand, 12740273 - 12740381
Alignment:
Q  278 gattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatc 377  Q
    ||||||| | |||||| ||||||||||| || |||||||| ||| ||| |||| ||| |||||| ||||  | || |||||||||||| |||||||||||    
T  12740273 gattctatgagattttaaaagactttttaattatgaaaaaatctggtgatatttaattaagactttttgcaacttaaaaaaagtcttgtggtattcaatc 12740372  T
Q  378 aagactctt 386  Q
    |||| ||||    
T  12740373 aagattctt 12740381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #109
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 510 - 562
Target Start/End: Original strand, 31639031 - 31639082
Alignment:
Q  510 catgaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  31639031 catgaaaacatgatatttcttaggattgtttttttctt-ttaagattttacta 31639082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #110
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 265 - 337
Target Start/End: Complemental strand, 33892564 - 33892492
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 337  Q
    |||||||||| | ||||||| | |||||| ||||||||||| || |||||||||| |||||||||||||||||    
T  33892564 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaa 33892492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #111
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 7718543 - 7718481
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||||||||||||||||||||||||  ||| || |||||||||| | |||||||||    
T  7718543 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 7718481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #112
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 442 - 520
Target Start/End: Original strand, 10617024 - 10617102
Alignment:
Q  442 tttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacat 520  Q
    |||||||||| |||||||||| ||||||||| ||||||||||||| ||||||| |  || | ||||||||| |||||||    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacat 10617102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #113
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 43187566 - 43187518
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    |||||||||| ||||||||||| || |||||||||||||||||||||||    
T  43187566 aaaaagtcttatggtattcaattaaaactctttgtcattttaaaaaagt 43187518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #114
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 267 - 383
Target Start/End: Complemental strand, 44257077 - 44256961
Alignment:
Q  267 tattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttga 366  Q
    |||||||| | ||||| | | |||||| ||| | ||||| || ||||||||||  |||||||||||||||||||| ||||  |  ||||||||||||||     
T  44257077 tattggattaggattcgatgagattttaaaaaagtttttaattatgaaaaagttctgtggtattcaatcaagactttttgcaaccttaaaaaagtcttgt 44256978  T
Q  367 ggtattcaatcaagact 383  Q
     ||||| ||||||||||    
T  44256977 agtatttaatcaagact 44256961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #115
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 407 - 462
Target Start/End: Original strand, 447854 - 447909
Alignment:
Q  407 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 462  Q
    |||||||| |||||||||||||||||||| ||||||||||| |||  |||||||||    
T  447854 gtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgat 447909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #116
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 8675352 - 8675414
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||| ||||||||||||||||| ||  ||| || |||||||||||| |||||||||    
T  8675352 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 8675414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #117
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 44122214 - 44122092
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatc-aagactctttgtcattttaaaaaagtct 363  Q
    |||||||||| |  ||||||  ||||||| ||||| ||||| || |||||||||| ||||||||||||||| |||| | ||||  | || ||||||   |    
T  44122214 tgtattggattagaattctataggattttaaaagattttttaattatgaaaaagtattgtggtattcaatcaaagattttttgcaacttaaaaaaaaatt 44122115  T
Q  364 tgaggtattcaatcaagactctt 386  Q
    || ||||||||||||||||||||    
T  44122114 tgtggtattcaatcaagactctt 44122092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #118
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 320 - 376
Target Start/End: Complemental strand, 1470448 - 1470392
Alignment:
Q  320 cttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaat 376  Q
    |||||| |||||||| |||||| |||||||||| |||||||||||| | ||||||||    
T  1470448 cttgtgctattcaattaagactatttgtcatttaaaaaaagtcttgtgatattcaat 1470392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #119
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 10616926 - 10616993
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 381  Q
    ||||||| ||||  |||||||| |||| | ||||||||||| ||||||||||||||||||| |||||||    
T  10616926 aaaaagttttgtaatattcaat-aagattatttgtcatttttaaaaagtcttgaggtattcgatcaaga 10616993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #120
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 46037410 - 46037355
Alignment:
Q  286 gggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||||| |||||||||||||| || ||||||| | ||| |||||||||||||||    
T  46037410 gggattttaaaagacttttttataattaaaaagtttagtgatattcaatcaagact 46037355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #121
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 371
Target Start/End: Original strand, 9179899 - 9179957
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtat 371  Q
    ||||||| |||| |||||||||||||||||||  ||| || |||||||||||| |||||    
T  9179899 aaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtat 9179957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #122
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 18838408 - 18838470
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||| ||||||||||||||||| ||  ||  || |||||||||||| |||||||||    
T  18838408 aaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaa 18838470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #123
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 33892431 - 33892369
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||| ||||||||||||||||| ||  ||| || || ||||||||| |||||||||    
T  33892431 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaa 33892369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #124
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 388
Target Start/End: Original strand, 40097140 - 40097178
Alignment:
Q  350 ttttaaaaaagtcttgaggtattcaatcaagactcttaa 388  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  40097140 ttttaaaaaagtctttaggtattcaatcaagacttttaa 40097178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #125
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 44122081 - 44122019
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||| ||||||||||||||||| ||  ||| || |||||| ||||| |||||||||    
T  44122081 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaa 44122019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #126
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 34115531 - 34115478
Alignment:
Q  288 gattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||| ||||||||||| || || ||||| |||||| ||||||||||||||||    
T  34115531 gattttaaaagactttttaatgataaaaaaatcttgtagtattcaatcaagact 34115478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #127
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 339
Target Start/End: Original strand, 151851 - 151935
Alignment:
Q  255 ctaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    ||||| ||||||||||||||   ||||  || ||||||| |||||||||||| |  |  |||||||||||| |||||||||||||    
T  151851 ctaaggggggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtgatattcaatcaaga 151935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #128
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 21066809 - 21066861
Alignment:
Q  289 attttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    ||||| ||||||||||| |  || ||||||| |||||||||||||||||||||    
T  21066809 attttaaaagactttttaaaaataaaaaagttttgtggtattcaatcaagact 21066861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #129
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 27418701 - 27418649
Alignment:
Q  287 ggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    ||||||| |||||||||||| |  |  ||||||||||||||||||||||||||    
T  27418701 ggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaga 27418649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #130
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 260 - 340
Target Start/End: Original strand, 48399725 - 48399805
Alignment:
Q  260 aggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagac 340  Q
    |||||||||||| ||  ||||| || | |||||| ||||||||||| |  || ||||| |||||||||| |||||||||||    
T  48399725 aggggtgtattgaattgtgattttatgagattttaaaagactttttaaaaataaaaaaatcttgtggtaatcaatcaagac 48399805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 189; Significance: 1e-102; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 6197701 - 6197453
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  6197701 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 6197602  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6197601 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 6197502  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6197501 gaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 6197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 1391606 - 1391854
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| || ||||||||| || ||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  1391606 aaaaagtcttgtgttattcaatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 1391705  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  1391706 ttcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcat 1391805  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  1391806 gaaaacatgagattccttaggattg-ttttttctttttaagattttacta 1391854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 2300961 - 2300714
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| ||| |||        |||| |||||    
T  2300961 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggta 2300862  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    || |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2300861 ttgaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 2300762  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||||||    
T  2300761 gaaaacatgagatttcttaggatt-tttttttctt-ttaaaattttacta 2300714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 28002647 - 28002895
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||  ||||||||||||| | |||||||||| |||||||||||  |||||||||||||||||||||||| |||        ||||||| ||    
T  28002647 aaaaagtcttgtcttattcaatcaagattttttgtcatttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgata 28002746  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||| |||||||||    
T  28002747 ttcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgaaattttctagtgaaattttagcatgaaaaagtctttcat 28002846  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||   |||||||||||||||||||||| ||||||||||||||    
T  28002847 gaaaacatgaagcttcttaggattgtttttttctt-ttaagattttacta 28002895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 31895678 - 31895907
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||  ||        ||| ||||||    
T  31895678 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 31895777  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||||| || ||||| |||||||||    
T  31895778 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcat 31895877  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  31895878 gaaaagatgagatttcttgagattgttttt 31895907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 315 - 544
Target Start/End: Original strand, 29076582 - 29076812
Alignment:
Q  315 aaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt-tctagtggtat 413  Q
    ||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||| ||| |||||||| |||         |||||| ||||    
T  29076582 aaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtat 29076681  T
Q  414 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatg 513  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||  ||||||||     
T  29076682 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcata 29076781  T
Q  514 aaaacatgagatttcttaggattgttttttt 544  Q
    |||||||||||||| ||||||||||||||||    
T  29076782 aaaacatgagattttttaggattgttttttt 29076812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 315 - 544
Target Start/End: Original strand, 29111555 - 29111786
Alignment:
Q  315 aaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt--tctagtggta 412  Q
    ||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||| ||| |||||||| |||          |||||| |||    
T  29111555 aaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagta 29111654  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||  ||||||||    
T  29111655 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcat 29111754  T
Q  513 gaaaacatgagatttcttaggattgttttttt 544  Q
     |||||||||||||| ||||||||||||||||    
T  29111755 aaaaacatgagattttttaggattgttttttt 29111786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 313 - 530
Target Start/End: Original strand, 34773391 - 34773608
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  34773391 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggta 34773490  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||  |||| ||||||| || ||||| |||||||||    
T  34773491 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcat 34773590  T
Q  513 gaaaacatgagatttctt 530  Q
    ||||| ||||||||||||    
T  34773591 gaaaagatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 14262656 - 14262427
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | || |||  ||        ||| ||||||    
T  14262656 aaaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggta 14262557  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  14262556 ttcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 14262457  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||| ||||||||  ||||||||||    
T  14262456 gaaaagatgggatttcttgagattgttttt 14262427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 261 - 530
Target Start/End: Complemental strand, 34759328 - 34759056
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagactttttt-atcatgaaaaa-gtcttgtggtattcaatcaagactctttgtcattttaaaaa 358  Q
    |||||||||||||| | ||||||| | |||||| |||||||||||  | | | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  34759328 ggggtgtattggattaggattctatgagattttaaaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaa 34759229  T
Q  359 a-gtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatt 457  Q
    | ||||||| |||||||||||||||| || ||| |||        ||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||    
T  34759228 aagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttccaaggattgtttaataaattggatt 34759129  T
Q  458 ttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttctt 530  Q
    ||||| |||||||||||||||| ||||| ||||||| || |||||  ||||||||||||| ||||||||||||    
T  34759128 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 34759056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 7051827 - 7052056
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||| | ||||||| |||||||||||| |||||||||||| ||||| |||||||||||||| ||| |||        ||  ||| ||    
T  7051827 aaaaagtcttgtggtatacgatcaagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgata 7051926  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||| |||||||||||| ||||||||||||||||| || ||||||    
T  7051927 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtaggattttctagtaaaattttagcatgaaaaagtttttcat 7052026  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
     ||| ||||||||||||||| |||||||||    
T  7052027 aaaatcatgagatttcttagaattgttttt 7052056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 265 - 530
Target Start/End: Original strand, 7497010 - 7497274
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| |  |||||| | |||||| ||||| ||||| || |||||||||| || ||||||||||||||||||  |||  | || |||||||||||    
T  7497010 tgtattggattagaattctatgagattttaaaagattttttaattatgaaaaagtattctggtattcaatcaagacttgttgcaacttaaaaaaagtctt 7497109  T
Q  365 gaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatag 464  Q
    | ||||||||||||||| | || ||| |||        ||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||||||| |    
T  7497110 gtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattggattttgatgg 7497209  T
Q  465 attttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttctt 530  Q
    ||||||| ||||||| ||||| ||||||| || ||||| |||||||||||||| ||||||||||||    
T  7497210 attttgt-ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 7497274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 30385280 - 30385063
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | || ||| |||        ||| ||||||    
T  30385280 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggta 30385181  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||          | |||||||||||||||| ||||| ||||||| ||  | || |||||||||    
T  30385180 ttcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaaca--acaaagtctttcat 30385093  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  30385092 gaaaagatgagatttcttgagattgttttt 30385063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 261 - 386
Target Start/End: Complemental strand, 2301055 - 2300930
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||| |||||||    
T  2301055 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaag 2300956  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  2300955 tcttgtgttattcaatcaagattctt 2300930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 261 - 386
Target Start/End: Complemental strand, 6197795 - 6197670
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||   |||| |||||||    
T  6197795 ggggtgtattggatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaaaaaaag 6197696  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  6197695 tcttgtgttattcaatcaagattctt 6197670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 262 - 381
Target Start/End: Original strand, 1391513 - 1391632
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||    
T  1391513 gggtgtattggatcatgattctaaaggattttaaatgacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 1391612  T
Q  362 cttgaggtattcaatcaaga 381  Q
    |||| | |||||||||||||    
T  1391613 cttgtgttattcaatcaaga 1391632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 31895588 - 31895709
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||| |||||||||||    
T  31895588 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 31895687  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  31895688 gtggtattcaatcaagactctt 31895709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 255 - 386
Target Start/End: Original strand, 29076479 - 29076611
Alignment:
Q  255 ctaagaggggtgtattggatcatgattctaagggattttcaaagactttt-ttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttt 353  Q
    ||||| |||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||   ||||     
T  29076479 ctaaggggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaattta 29076578  T
Q  354 aaaaaagtcttgaggtattcaatcaagactctt 386  Q
    || ||||||||| | ||||||||||||| ||||    
T  29076579 aataaagtcttgtgttattcaatcaagattctt 29076611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 255 - 386
Target Start/End: Original strand, 29111452 - 29111584
Alignment:
Q  255 ctaagaggggtgtattggatcatgattctaagggattttcaaagactttt-ttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttt 353  Q
    ||||| |||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||   ||||     
T  29111452 ctaaggggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaattta 29111551  T
Q  354 aaaaaagtcttgaggtattcaatcaagactctt 386  Q
    || ||||||||| | ||||||||||||| ||||    
T  29111552 aataaagtcttgtgttattcaatcaagattctt 29111584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 34773301 - 34773422
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | |||| || |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||| |||||||||||    
T  34773301 tgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 34773400  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  34773401 gtggtattcaatcaagactctt 34773422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 254 - 386
Target Start/End: Complemental strand, 14262757 - 14262625
Alignment:
Q  254 actaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttt 353  Q
    |||||| ||| |||||||||| | ||||||| |||||||| ||||||||||| || |||||||| ||||||||||||||||||||| | ||||  | ||     
T  14262757 actaagggggatgtattggattaggattctacgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagattttttgcaactta 14262658  T
Q  354 aaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||||| ||||||||||||||||||||    
T  14262657 aaaaaagtcttgtggtattcaatcaagactctt 14262625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 7051733 - 7051858
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||| || ||| | ||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||  | || |||||||    
T  7051733 ggggtgtgtttgattaggattctaagagattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttgcaacttaaaaaaag 7051832  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| ||||| | ||||||| ||||    
T  7051833 tcttgtggtatacgatcaagattctt 7051858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 407 - 542
Target Start/End: Original strand, 31067569 - 31067694
Alignment:
Q  407 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtc 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||          | |||||||||||||||| ||||| ||||||| || ||||| |||    
T  31067569 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 31067658  T
Q  507 tttcatgaaaacatgagatttcttaggattgttttt 542  Q
    |||||| |||| ||||||||||||  ||||||||||    
T  31067659 tttcataaaaagatgagatttcttgagattgttttt 31067694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 322 - 502
Target Start/End: Original strand, 656957 - 657122
Alignment:
Q  322 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatc 421  Q
    |||| ||||||||||||| |||||| ||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||||| |||||    
T  656957 tgtgttattcaatcaagattctttg-catttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatc 657055  T
Q  422 attcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaa 502  Q
    |||||||||           ||||||||||| |||| |||| ||||||||||||||   ||||||||||||| ||||||||    
T  657056 attcaaatt-----------tttaataaatctgattctgatggattttgtgggatt---tagtgaaattttatcatgaaaa 657122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 289 - 381
Target Start/End: Original strand, 28002581 - 28002673
Alignment:
Q  289 attttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 381  Q
    ||||| |||||||||||||| |||||||| |||||| ||||||||||||||||||||   |||| ||||||||||||   |||||||||||||    
T  28002581 attttaaaagacttttttataatgaaaaaatcttgtcgtattcaatcaagactctttccaatttaaaaaaagtcttgtcttattcaatcaaga 28002673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 301 - 379
Target Start/End: Original strand, 3848092 - 3848170
Alignment:
Q  301 ttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 379  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||||||  | || |||||||||||| |||||||||||||    
T  3848092 ttttttaacatgaaaaagtctggtggtattcaatcaagattctttgcaacttaaaaaaagtcttgtggtattcaatcaa 3848170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 488 - 561
Target Start/End: Original strand, 2238668 - 2238741
Alignment:
Q  488 attttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgtttttttcttcttaagattttact 561  Q
    ||||||| |||||||  ||||||||||||||||||||||||||| ||||||||||||  | |||||||||||||    
T  2238668 attttagtatgaaaaaatctttcatgaaaacatgagatttcttaagattgttttttttcttttaagattttact 2238741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 422 - 542
Target Start/End: Complemental strand, 4200541 - 4200431
Alignment:
Q  422 attcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatg 521  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||||||||          |||| ||||||| || ||||| |||||||||||||| |||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T
Q  522 agatttcttaggattgttttt 542  Q
    |||||||||  ||||||||||    
T  4200451 agatttcttgagattgttttt 4200431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 313 - 451
Target Start/End: Original strand, 3848194 - 3848330
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||| ||||||||||||||||||| ||| |||||||||| ||| |||| ||| |||| ||||||||||  ||| ||| |||        | | ||||||    
T  3848194 aaaaattcttgtggtattcaatcaaaactttttgtcatttaaaacaagtattgtggtaatcaatcaaga--cttcatcacttaaaaaaagttttgtggta 3848291  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaat 451  Q
    |||||||||||| |||||| ||| |||||||||||||||    
T  3848292 ttcaaaatcatttaaattttgaatgattgtttaataaat 3848330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 284 - 382
Target Start/End: Original strand, 7100186 - 7100284
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagac 382  Q
    |||||||||| |||||||||||||  |||||||||||| ||||||||||||||||||| ||    | | |||| || ||||| ||||||||||||||||    
T  7100186 aagggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagacttttataaaatctaaacaaatcttgtggtattcaatcaagac 7100284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 284 - 382
Target Start/End: Complemental strand, 8794444 - 8794346
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagac 382  Q
    |||||||||| |||||||||||||  |||||||||||| ||||||||||||||||||| ||    | | |||| || ||||| ||||||||||||||||    
T  8794444 aagggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagacttttataaaatctaaacaaatcttgtggtattcaatcaagac 8794346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 5957148 - 5957205
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||||||| |||||||||||||| || ||||||||| |||||||||||||||||||    
T  5957148 aagggattttaaaagacttttttataataaaaaagtctagtggtattcaatcaagact 5957205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 284 - 382
Target Start/End: Original strand, 708937 - 709035
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagac 382  Q
    |||||||||| |||||||||||||| |||||||| ||| ||||||||||||||| ||| ||    | | |||| || ||||| ||||||||||||||||    
T  708937 aagggattttaaaagacttttttataatgaaaaaatctagtggtattcaatcaaaacttttataaaatgtaaataaatcttgtggtattcaatcaagac 709035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 656989 - 657049
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattc 373  Q
    ||||||||||||||||||||||||||||||||  ||| || |||||||||| | |||||||    
T  656989 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 657049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 496 - 536
Target Start/End: Complemental strand, 11113773 - 11113733
Alignment:
Q  496 atgaaaatgtctttcatgaaaacatgagatttcttaggatt 536  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  11113773 atgaaaacgtctttcatgaaaacatgagatttcttaggatt 11113733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 31609751 - 31609697
Alignment:
Q  287 ggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    ||||||| ||||||||||| || || ||||| |||||||||||||||||||||||    
T  31609751 ggattttaaaagactttttaattataaaaaaatcttgtggtattcaatcaagact 31609697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 359
Target Start/End: Original strand, 656879 - 656950
Alignment:
Q  288 gattttcaaagacttttttatcat-gaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 359  Q
    |||||| |||||||||||||||||  ||||| |||| |||||||||||||| ||||||| ||| |||||||||    
T  656879 gattttaaaagacttttttatcataaaaaaaatcttatggtattcaatcaatactcttt-tcaatttaaaaaa 656950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 509 - 543
Target Start/End: Original strand, 657114 - 657148
Alignment:
Q  509 tcatgaaaacatgagatttcttaggattgtttttt 543  Q
    |||||||||||||| ||||||||||||||||||||    
T  657114 tcatgaaaacatgaaatttcttaggattgtttttt 657148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 388
Target Start/End: Complemental strand, 10644052 - 10644014
Alignment:
Q  350 ttttaaaaaagtcttgaggtattcaatcaagactcttaa 388  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  10644052 ttttaaaaaagtctttaggtattcaatcaagacttttaa 10644014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 388
Target Start/End: Original strand, 30877898 - 30877936
Alignment:
Q  350 ttttaaaaaagtcttgaggtattcaatcaagactcttaa 388  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  30877898 ttttaaaaaagtctttaggtattcaatcaagacttttaa 30877936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 8636752 - 8636699
Alignment:
Q  288 gattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||| |||||||||| ||| |||||||||||  ||||||||| |||||||||    
T  8636752 gattttaaaagacttttctatgatgaaaaagtcacgtggtattcgatcaagact 8636699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 354 - 386
Target Start/End: Complemental strand, 30385281 - 30385249
Alignment:
Q  354 aaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||||| ||||||||||||||||||||    
T  30385281 aaaaaagtcttgtggtattcaatcaagactctt 30385249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 80)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 261 - 562
Target Start/End: Original strand, 9120058 - 9120358
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||   ||||||||||||    
T  9120058 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcatgtggtattcaatcaagactctttccaattttaaaaaag 9120157  T
Q  361 tcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 460  Q
    ||||| | ||||||||||||| |||||||| |||        ||||||| |||||||||||||||| ||||  |||||||||||||||||| ||||||||    
T  9120158 tcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatcattcagattttaaaggattgtttaataaattagattttg 9120257  T
Q  461 atagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgtttttttcttcttaagattttac 560  Q
    || ||||||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9120258 atggattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatgagatttcttaggattgtttttttctt-ttaagattttac 9120356  T
Q  561 ta 562  Q
    ||    
T  9120357 ta 9120358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 16269675 - 16269923
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  16269675 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 16269774  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||    
T  16269775 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcat 16269874  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16269875 gaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 16269923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 20605220 - 20605468
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  20605220 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 20605319  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20605320 ttcaaaatcattaaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 20605419  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20605420 gaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 20605468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 31170850 - 31170602
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  31170850 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 31170751  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31170750 ttcaaaatcattcaaatttccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 31170651  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31170650 gaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 31170602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 24776339 - 24776586
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  24776339 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 24776438  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24776439 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 24776538  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  24776539 gaaaacatgagatttcttaggattg-ttttttctt-ttaagattttacta 24776586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 14198803 - 14198555
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        || |||||||    
T  14198803 aaaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggta 14198704  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||    
T  14198703 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcat 14198604  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14198603 gaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 14198555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 12407364 - 12407612
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||| |||||||||||| |||        ||||||||||    
T  12407364 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggta 12407463  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||    
T  12407464 ttcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcat 12407563  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  12407564 gaaaacatgagatttcttaagattgtttttttctt-ttaagattttacta 12407612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 43847630 - 43847878
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        |||||| |||    
T  43847630 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgta 43847729  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||| |||| ||||    
T  43847730 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcat 43847829  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43847830 gaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 43847878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 313 - 561
Target Start/End: Complemental strand, 5093273 - 5093025
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||| ||||||| |||        |||||| |||    
T  5093273 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagta 5093174  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  5093173 ttcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcat 5093074  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttact 561  Q
     |||||||||||||||||||||||||||||||  | |||||||||||||    
T  5093073 aaaaacatgagatttcttaggattgttttttttcttttaagattttact 5093025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 305691 - 305443
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| | |||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  305691 aaaaagtcttgtgttattcaatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 305592  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||||| |||||||||    
T  305591 ttcaaaatcattcaaattttgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcat 305492  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  305491 gaaaacatgagatttcttaggattgtttatttctt-ttaagattttacta 305443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 35317046 - 35317294
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||| ||||| ||||||||||||| |||||||||||| ||||||||||||   |||||||||||||||||||||| |||        ||||||||||    
T  35317046 aaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggta 35317145  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||    
T  35317146 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcat 35317245  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||| ||||||||||  |||||||||||||| ||||||||||||||    
T  35317246 gaaaacataagatttcttaacattgtttttttctt-ttaagattttacta 35317294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 22551989 - 22551741
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| |||||| |||        ||||||||||    
T  22551989 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggta 22551890  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||| |||||||||||||| ||||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||    
T  22551889 ttcaaaattattcaaatttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcat 22551790  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||||||    
T  22551789 gaaaacatgagatttcttatgattgttttttcctt-ttaagattttacta 22551741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 44765759 - 44765998
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||| |||||||||||| |||        ||||||||||    
T  44765759 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggta 44765858  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||         ||||||    
T  44765859 ttcaaaatcattcaaatttcgaaagattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcat---------tttcat 44765949  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  44765950 gaaaacatgagatttcttaggattgtttttttctt-ttaaaattttacta 44765998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 32125234 - 32125486
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaat---cgcttnnnnnnnttctagtg 409  Q
    ||||||||||||| ||||||||||| | |||||||||||| ||||||||| || |||||||||||||||||||||||   |  ||        || ||||    
T  32125234 aaaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtg 32125333  T
Q  410 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtcttt 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||    
T  32125334 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtcttt 32125433  T
Q  510 catgaaaacatgagatttctt-aggattgtttttttcttcttaagattttacta 562  Q
    |||||||| |||||||||||| |  |||||||||||||| ||||||||||||||    
T  32125434 catgaaaatatgagatttcttaaaaattgtttttttctt-ttaagattttacta 32125486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 28844539 - 28844768
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  28844539 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 28844638  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||| ||||| |||||||  | ||||| |||||||||    
T  28844639 ttcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcat 28844738  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
     |||| ||||||||||||  ||||||||||    
T  28844739 aaaaagatgagatttcttgagattgttttt 28844768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 1789426 - 1789676
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||  | ||||||||||| |||||||||| |||        ||||||||||    
T  1789426 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggta 1789525  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  1789526 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcat 1789625  T
Q  513 gaaaa-ca-tgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
     |||| || | | | ||||||||||| |||||||||| |||| |||||||||    
T  1789626 caaaatcattcaaaattcttaggattatttttttctt-ttaaaattttacta 1789676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 33135607 - 33135835
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  33135607 aaaaagtattgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggta 33135706  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  33135707 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 33135806  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
     |||| ||||||||||||  ||||||||||    
T  33135807 -aaaaaatgagatttcttgagattgttttt 33135835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 322 - 542
Target Start/End: Original strand, 25288152 - 25288372
Alignment:
Q  322 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatc 421  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||| |||        ||| |||||||||||||||    
T  25288152 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatc 25288251  T
Q  422 attcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatg 521  Q
    ||||||||||||||||||||||||||||||  |||||||||  ||||||||||||||| ||||| ||||||| || || || |||||||||||||| |||    
T  25288252 attcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatg 25288351  T
Q  522 agatttcttaggattgttttt 542  Q
    |||||||||  ||||||||||    
T  25288352 agatttcttgagattgttttt 25288372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 10657390 - 10657619
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||| || ||| |||        ||| ||||||    
T  10657390 aaaaagtcttgtggtattcaatcaagatcctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 10657489  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| || ||||||    
T  10657490 ttcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcat 10657589  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| |||| |||||||  ||||||||||    
T  10657590 gaaaagatgaaatttcttgagattgttttt 10657619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 327 - 542
Target Start/End: Original strand, 18177265 - 18177480
Alignment:
Q  327 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattca 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        | | ||||||||||||||||||||    
T  18177265 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattca 18177364  T
Q  427 aatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatt 526  Q
    ||||||||||||||||||||| |||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||| || |||| ||||||||    
T  18177365 aatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgagatt 18177464  T
Q  527 tcttaggattgttttt 542  Q
    ||||  ||||||||||    
T  18177465 tcttgagattgttttt 18177480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 26788768 - 26788996
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt--tctagtgg 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  |           ||| ||||    
T  26788768 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaaaaaagtcttgtgg 26788867  T
Q  411 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttc 510  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||    
T  26788868 tattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 26788967  T
Q  511 atgaaaacatgagatttcttaggattgttttt 542  Q
    ||   || ||||||||||||  ||||||||||    
T  26788968 at---aagatgagatttcttgagattgttttt 26788996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 28740509 - 28740290
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  28740509 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 28740410  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||          ||| ||||||| || ||||| |||||||||    
T  28740409 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcat 28740320  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
     |||| ||||||||||||  ||||||||||    
T  28740319 aaaaagatgagatttcttgagattgttttt 28740290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 313 - 471
Target Start/End: Original strand, 7026588 - 7026746
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  7026588 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 7026687  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgt 471  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  7026688 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 7026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 253 - 386
Target Start/End: Original strand, 24776237 - 24776370
Alignment:
Q  253 aactaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattt 352  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  24776237 aactaaggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaattt 24776336  T
Q  353 taaaaaagtcttgaggtattcaatcaagactctt 386  Q
     |||||||||||| | ||||||||||||| ||||    
T  24776337 aaaaaaagtcttgtgttattcaatcaagattctt 24776370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 256 - 471
Target Start/End: Original strand, 378864 - 379079
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||| ||||||||||||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  | || ||    
T  378864 taagggggatgtattggatcatgattataagggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaa 378963  T
Q  356 aaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga 455  Q
    |||||||||| ||||||||||||| ||| ||  ||  ||        | |  |||||||||||||||||||||||| |||||||||||||||||||  ||    
T  378964 aaaagtcttgtggtattcaatcaaaactttttctcatttaaaaaaagtttcatggtattcaaaatcattcaaattttgaaggattgtttaataaattgga 379063  T
Q  456 ttttgatagattttgt 471  Q
    ||||||||||||||||    
T  379064 ttttgatagattttgt 379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 260 - 386
Target Start/End: Original strand, 16269580 - 16269706
Alignment:
Q  260 aggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 359  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||   |||| ||||||    
T  16269580 aggggtgtattggatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 16269679  T
Q  360 gtcttgaggtattcaatcaagactctt 386  Q
    |||||| | ||||||||||||| ||||    
T  16269680 gtcttgtgttattcaatcaagattctt 16269706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 12407270 - 12407395
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||    
T  12407270 ggggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattcttttcaattttaaaaaag 12407369  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  12407370 tcttgtgttattcaatcaagattctt 12407395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 20605042 - 20605167
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||   |||| |||||||    
T  20605042 ggggtgtattggatcatgattctaagggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 20605141  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  20605142 tcttgtgttattcaatcaagattctt 20605167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 261 - 386
Target Start/End: Complemental strand, 31170944 - 31170819
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||   |||| |||||||    
T  31170944 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaag 31170845  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  31170844 tcttgtgttattcaatcaagattctt 31170819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 263 - 379
Target Start/End: Complemental strand, 14198894 - 14198779
Alignment:
Q  263 ggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtc 362  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||    
T  14198894 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttct-aatttaaaaaagtc 14198796  T
Q  363 ttgaggtattcaatcaa 379  Q
    ||| | |||||||||||    
T  14198795 ttgtgttattcaatcaa 14198779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 10125518 - 10125297
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt--gaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtgg 410  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||| ||| || ||| |||        |||  ||     
T  10125518 aaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttttgagatattcaatcaaaacttttcatcacttaaaaaaagtctcatga 10125419  T
Q  411 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttc 510  Q
    |||||||||||||||||||||| ||||||||||||||||||       |||   ||||||||||||||| ||||||||||||| || ||||| |||||||    
T  10125418 tattcaaaatcattcaaatttcaaaggattgtttaataaat-------tga---attttgtgggattttttagtgaaattttaacaagaaaaagtctttc 10125329  T
Q  511 atgaaaacatgagatttcttaggattgttttt 542  Q
    || |||||| ||||||||||| ||||||||||    
T  10125328 ataaaaacacgagatttcttaagattgttttt 10125297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 263 - 386
Target Start/End: Original strand, 44765667 - 44765790
Alignment:
Q  263 ggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtc 362  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||   |||| |||||||||    
T  44765667 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaaactctttccaatttaaaaaaagtc 44765766  T
Q  363 ttgaggtattcaatcaagactctt 386  Q
    ||| | ||||||||||||| ||||    
T  44765767 ttgtgttattcaatcaagattctt 44765790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 313 - 530
Target Start/End: Complemental strand, 13833648 - 13833441
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||| || ||| |||        |||  |||||    
T  13833648 aaaaagtcttgtggtattcaatcaagactttttatcattttaaaaaagtcttgatatattcaatcaagacttttcatcacttaaaaaaagtcttctggta 13833549  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||| |||||||||||||||||||          | |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  13833548 ttcaaaatcattcaaattttgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 13833459  T
Q  513 gaaaacatgagatttctt 530  Q
    || || ||||||||||||    
T  13833458 gacaagatgagatttctt 13833441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 26601426 - 26601191
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||| ||||| |||| ||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||||| |||        ||  ||||||    
T  26601426 aaaaagttttgtgttatttaatcaagactctttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggta 26601327  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||| | ||||||||||||||          |||||||||||||||||||||||||| |||| ||| |||| || ||| ||    
T  26601326 ttcaaaatcattcaaatttcgaatgtttgtttaataaatc----------agattttgtgggattttctagtgaaactttaacattaaaa-gtttttgat 26601238  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||| |||||| ||||||||| ||||||||| ||||||||||||||    
T  26601237 gaaaacat-agattttttaggattg-ttttttctt-ttaagattttacta 26601191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 262 - 386
Target Start/End: Complemental strand, 22552082 - 22551958
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||   |||| ||||||||    
T  22552082 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattttttccaatttaaaaaaagt 22551983  T
Q  362 cttgaggtattcaatcaagactctt 386  Q
    |||| | ||||||||||||| ||||    
T  22551982 cttgtgttattcaatcaagattctt 22551958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 313 - 460
Target Start/End: Original strand, 3574831 - 3574978
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||| ||    
T  3574831 aaaaagttttgtggtattcaatcaagactaattgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgata 3574930  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 460  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  3574931 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 260 - 386
Target Start/End: Original strand, 35316951 - 35317077
Alignment:
Q  260 aggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 359  Q
    |||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||    
T  35316951 aggggtgtattgaatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 35317050  T
Q  360 gtcttgaggtattcaatcaagactctt 386  Q
    || ||| | ||||||||||||| ||||    
T  35317051 gttttgtgttattcaatcaagattctt 35317077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 255 - 386
Target Start/End: Original strand, 26788668 - 26788799
Alignment:
Q  255 ctaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttta 354  Q
    ||||| ||| |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||| |    
T  26788668 ctaagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaa 26788767  T
Q  355 aaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||||||||| ||||||||||||||||||||    
T  26788768 aaaaagtcttgtggtattcaatcaagactctt 26788799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 1789332 - 1789457
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||||||||| ||||||||||||||||||||||||| |||||||   |||| |||||||    
T  1789332 ggggtgtattggatcatgattctaagagattttaaaagatttttttatcataaaaaagtcttgtggtattcaatcaaaactctttccaatttaaaaaaag 1789431  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  1789432 tcttgtgttattcaatcaagattctt 1789457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 313 - 444
Target Start/End: Complemental strand, 215451 - 215320
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  215451 aaaaagtcttgtggtattcaatcaagactctttgtcaattttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggta 215352  T
Q  413 ttcaaaatcattcaaatttcgaaggattgttt 444  Q
    |||||||||||||||| ||| |||||||||||    
T  215351 ttcaaaatcattcaaacttcaaaggattgttt 215320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 261 - 381
Target Start/End: Complemental strand, 305787 - 305665
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttgtcattt-taaaaa 358  Q
    |||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||  |||||    
T  305787 ggggtgtattggatcatgattctaagcgattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 305688  T
Q  359 agtcttgaggtattcaatcaaga 381  Q
    ||||||| | |||||||||||||    
T  305687 agtcttgtgttattcaatcaaga 305665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 3463655 - 3463875
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaaga-ctctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggt 411  Q
    |||||||||| |  ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| || |||  ||        ||| |||||    
T  3463655 aaaaagtcttataatattcaatcaagaactctttgtcattttaaaaaagtcttgaggtgttcaatcaagacttttcatcatttaaaaaaagtcttgtggt 3463754  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca 511  Q
    ||| |||||||||||| |||| ||||||||||||||||||  |||||||||          ||||||| ||||| ||||||| || ||||| ||||||||    
T  3463755 atttaaaatcattcaattttcaaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttca 3463844  T
Q  512 tgaaaacatgagatttcttaggattgttttt 542  Q
    |||||| ||||||||||||  ||||||||||    
T  3463845 tgaaaatatgagatttcttgagattgttttt 3463875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 261 - 386
Target Start/End: Complemental strand, 26601520 - 26601395
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    |||||||||||||||||| |||||| ||||||| |||||||||||||| || ||||||||||||||||||||||||| ||||||| | |||| |||||||    
T  26601520 ggggtgtattggatcatgtttctaaaggattttaaaagacttttttattattaaaaagtcttgtggtattcaatcaaaactctttctaatttaaaaaaag 26601421  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    | ||| | |||| |||||||||||||    
T  26601420 ttttgtgttatttaatcaagactctt 26601395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 28844449 - 28844570
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  | || |||||||||||    
T  28844449 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 28844548  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  28844549 gtggtattcaatcaagactctt 28844570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 313 - 460
Target Start/End: Complemental strand, 6224774 - 6224626
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgc-ttnnnnnnnttctagtggt 411  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | || ||| | ||        ||| |||||    
T  6224774 aaaaagtcatgtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactttaaaaaaagtcttgtggt 6224675  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 460  Q
    ||||||||| ||||||||||||||||||| ||||||||||  |||||||    
T  6224674 attcaaaattattcaaatttcgaaggattatttaataaattggattttg 6224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 273 - 379
Target Start/End: Original strand, 32125152 - 32125258
Alignment:
Q  273 atcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtatt 372  Q
    ||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||   |||| |||||||||||| | ||||    
T  32125152 atcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttatt 32125251  T
Q  373 caatcaa 379  Q
    |||||||    
T  32125252 caatcaa 32125258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 215541 - 215420
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| | |||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  | || |||||||||||    
T  215541 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 215442  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  215441 gtggtattcaatcaagactctt 215420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 266 - 386
Target Start/End: Complemental strand, 28740598 - 28740478
Alignment:
Q  266 gtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttg 365  Q
    ||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||| ||| ||||  | || ||||||||||||    
T  28740598 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttg 28740499  T
Q  366 aggtattcaatcaagactctt 386  Q
     ||||||||||||||||||||    
T  28740498 tggtattcaatcaagactctt 28740478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 255 - 386
Target Start/End: Original strand, 33135507 - 33135638
Alignment:
Q  255 ctaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttta 354  Q
    ||||| ||| |||||||||| | |||||||  ||||||| ||||||||||| || ||||||||||||| |||||||||||||||||| ||||  |||| |    
T  33135507 ctaagggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaa 33135606  T
Q  355 aaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||||| ||| ||||||||||||||||||||    
T  33135607 aaaaagtattgtggtattcaatcaagactctt 33135638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 419 - 542
Target Start/End: Original strand, 43078653 - 43078776
Alignment:
Q  419 atcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaac 518  Q
    ||||||||||||||||| |||||||||||||||  |||||| || |||||||||||||||| ||||| ||||||| |||||||| ||||||||| ||||     
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  519 atgagatttcttaggattgttttt 542  Q
    || |||||||||  ||||||||||    
T  43078753 ataagatttcttgagattgttttt 43078776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 7026497 - 7026619
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaa-agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtct 363  Q
    |||||||||| | ||||||| | |||||| ||||||||||| || ||||||| ||||||||||||||||||||||||| ||||  |||| ||||||||||    
T  7026497 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtct 7026596  T
Q  364 tgaggtattcaatcaagactctt 386  Q
    || ||||||||||||||||||||    
T  7026597 tgtggtattcaatcaagactctt 7026619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 261 - 381
Target Start/End: Original strand, 19144914 - 19145033
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    |||||||||||||  |||||||||||||||||| ||| | ||||||||||| ||||||||||||||||||||||||| |||| || ||| || ||||||     
T  19144914 ggggtgtattggaatatgattctaagggattttaaaatatttttttatcataaaaaagtcttgtggtattcaatcaaaactcatt-tcaattaaaaaaaa 19145012  T
Q  361 tcttgaggtattcaatcaaga 381  Q
    ||||| |||||||||||||||    
T  19145013 tcttgtggtattcaatcaaga 19145033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 43847536 - 43847661
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    |||||||||| |||||||  ||||||||||||| ||||||||||||||| |||||||||||| | |||||||| ||| |||||||   |||| |||||||    
T  43847536 ggggtgtattagatcatgtatctaagggattttaaaagacttttttatcgtgaaaaagtcttctagtattcaagcaaaactctttccaatttaaaaaaag 43847635  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  43847636 tcttgtgttattcaatcaagattctt 43847661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 256 - 381
Target Start/End: Original strand, 3463556 - 3463681
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||| |||||||||| ||||||||| | |||||| ||||||||||| || |||||||| ||||||||||||||||||||||| ||||  |||| ||    
T  3463556 taagggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagactttttgcaatttaaa 3463655  T
Q  356 aaaagtcttgaggtattcaatcaaga 381  Q
    |||||||||    |||||||||||||    
T  3463656 aaaagtcttataatattcaatcaaga 3463681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 20605136 - 20605209
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  20605136 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctt 20605209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 279 - 386
Target Start/End: Complemental strand, 10125594 - 10125487
Alignment:
Q  279 attctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatca 378  Q
    |||||||| |||||| ||||| ||||| || |||||||||||| |||  |||||||||||||||||||  |||| |||||||| ||| ||||||||||||    
T  10125594 attctaagagattttaaaagattttttaattatgaaaaagtctcgtgacattcaatcaagactctttgcaatttaaaaaaagttttgtggtattcaatca 10125495  T
Q  379 agactctt 386  Q
    ||||||||    
T  10125494 agactctt 10125487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 265 - 383
Target Start/End: Complemental strand, 13833738 - 13833620
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| | |||||| |||||  |||| || |||||||||| ||||||||||||||||||||| ||||  | || |||||||||||    
T  13833738 tgtattggattaggattctatgagattttaaaagatattttaattatgaaaaagtattgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 13833639  T
Q  365 gaggtattcaatcaagact 383  Q
    | |||||||||||||||||    
T  13833638 gtggtattcaatcaagact 13833620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 43078569 - 43078654
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcat 350  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||| | ||||||||    
T  43078569 tgtattggattaggattctatgggattttaaaagactttttgattatgaaaaagtcttgtggtattcaatcaagattttttgtcat 43078654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 279 - 383
Target Start/End: Original strand, 3574755 - 3574859
Alignment:
Q  279 attctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatca 378  Q
    |||||| || ||||| ||||||||||| || |||||||||| ||||||||||||||||||||| ||||  | || |||||||| ||| ||||||||||||    
T  3574755 attctatggaattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatca 3574854  T
Q  379 agact 383  Q
    |||||    
T  3574855 agact 3574859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 256 - 381
Target Start/End: Original strand, 10657291 - 10657416
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||| ||||||||||   ||||||| |||||||| || ||||||||  | ||||||||||| ||||||||||||||||| || ||||  | || ||    
T  10657291 taagggggatgtattggatttggattctatgggattttaaatgactttttagttatgaaaaagtcgtgtggtattcaatcaaggctttttgaaacttaaa 10657390  T
Q  356 aaaagtcttgaggtattcaatcaaga 381  Q
    |||||||||| |||||||||||||||    
T  10657391 aaaagtcttgtggtattcaatcaaga 10657416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 266 - 386
Target Start/End: Complemental strand, 5093352 - 5093242
Alignment:
Q  266 gtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttg 365  Q
    |||||||||||||||||||||||||||| |||||||          |||||  |||||||||||||||||||||||||||   |||| ||||||||||||    
T  5093352 gtattggatcatgattctaagggattttaaaagact----------gaaaatatcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttg 5093263  T
Q  366 aggtattcaatcaagactctt 386  Q
     | ||||||||||||| ||||    
T  5093262 tgttattcaatcaagattctt 5093242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 20605178 - 20605251
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||||||||||||||||||||||||||   |||| |||||||||||| | ||||||||||||| ||||    
T  20605178 aaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctt 20605251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 383
Target Start/End: Original strand, 19145007 - 19145080
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaaga---ctctttgtcattttaaaaaagtcttgaggtattcaatcaagact 383  Q
    ||||| |||||||||||||||||||||   |||||| |||||| ||||||| |||| |||||||||||||||||    
T  19145007 aaaaaatcttgtggtattcaatcaagagtactctttatcatttaaaaaaagacttgtggtattcaatcaagact 19145080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 8172120 - 8172193
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||||| |||||||||| |||||| ||||||| ||| || | |||||||||| |||||| |||||||||||||    
T  8172120 aaaaagttttgtggtatttaatcaatactctttatcacttaagaaaagtcttgtggtatttaatcaagactctt 8172193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 341
Target Start/End: Complemental strand, 3858274 - 3858191
Alignment:
Q  258 agaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||| ||||||||| || | |||| ||||||||||| ||||||||||| || || ||||| | || ||||||||||||||||||    
T  3858274 agagcggtgtattgaattaagattttaagggattttaaaagactttttaatgataaaaaacttttttggtattcaatcaagact 3858191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 287 - 386
Target Start/End: Original strand, 8172053 - 8172151
Alignment:
Q  287 ggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||||| ||||| |||||||| |||||||| | ||||||  ||||||||||| ||||| | || |||||||||| ||| |||||| |||||| ||||||    
T  8172053 ggattttaaaagatttttttattatgaaaaaattttgtggctttcaatcaagattctttct-atcttaaaaaagttttgtggtatttaatcaatactctt 8172151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 314 - 361
Target Start/End: Original strand, 8172163 - 8172210
Alignment:
Q  314 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    ||||||||||||||||| |||||||||||||||||| || ||||||||    
T  8172163 aaaagtcttgtggtatttaatcaagactctttgtcacttcaaaaaagt 8172210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 262 - 341
Target Start/End: Complemental strand, 18176553 - 18176474
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||||||| || | ||||  |||||||||| ||||| ||||| || || ||||| |||||||||||||||||||||||    
T  18176553 gggtgtattgaattaagatttgaagggattttaaaagattttttaataataaaaaaatcttgtggtattcaatcaagact 18176474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 2288483 - 2288538
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||||||| |||||||||||||| ||  |||||||| |||||||||||||||||||    
T  2288483 aagggattttaaaagacttttttattat--aaaagtctagtggtattcaatcaagact 2288538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 386
Target Start/End: Complemental strand, 6224829 - 6224743
Alignment:
Q  300 cttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||| || |||||||||| |||||||||| |||||||| | ||||  | || ||||||||| || |||||| |||||||||||||    
T  6224829 ctttttaattatgaaaaagttttgtggtattgaatcaagattttttgcaaattaaaaaaagtcatgtggtatttaatcaagactctt 6224743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 18177293 - 18177355
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||| ||||||||||||||||| ||  |||||| |||||||| ||| |||||||||    
T  18177293 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaa 18177355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 43825085 - 43825147
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggt 327  Q
    |||||||||| ||||||||| | |||||| ||||| ||||| || ||||||||||||||||||    
T  43825085 tgtattggattatgattctatgagattttaaaagattttttaattatgaaaaagtcttgtggt 43825147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 407 - 451
Target Start/End: Complemental strand, 21370682 - 21370638
Alignment:
Q  407 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 451  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||||    
T  21370682 gtggtattcaaaatcattcaaattttgaagtattgtttgataaat 21370638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 388
Target Start/End: Original strand, 11534881 - 11534919
Alignment:
Q  350 ttttaaaaaagtcttgaggtattcaatcaagactcttaa 388  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  11534881 ttttaaaaaagtctttaggtattcaatcaagacttttaa 11534919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 21987316 - 21987366
Alignment:
Q  287 ggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 337  Q
    ||||||| |||||||||||||| ||||||||||  ||| ||||||||||||    
T  21987316 ggattttaaaagacttttttatgatgaaaaagttatgtagtattcaatcaa 21987366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 388
Target Start/End: Complemental strand, 34028971 - 34028933
Alignment:
Q  350 ttttaaaaaagtcttgaggtattcaatcaagactcttaa 388  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  34028971 ttttaaaaaagtctttaggtattcaatcaagacttttaa 34028933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 473 - 542
Target Start/End: Complemental strand, 215303 - 215235
Alignment:
Q  473 ggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    ||||||| ||||| ||||||| || ||||| |||||||||||||| |||||||||| |  ||||||||||    
T  215303 ggattttgtagtgtaattttaaca-gaaaaagtctttcatgaaaagatgagatttcatgagattgttttt 215235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 530
Target Start/End: Complemental strand, 6224625 - 6224576
Alignment:
Q  481 tagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttctt 530  Q
    ||||| ||||||| || ||||| |||||||||||||| ||||||||||||    
T  6224625 tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6224576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 339
Target Start/End: Original strand, 29940945 - 29941022
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    |||||||||||||   ||||  || ||||||| |||||||||||| |  |  ||||||||||||||||||||||||||    
T  29940945 gggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaga 29941022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 24193574 - 24193626
Alignment:
Q  287 ggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    ||||||| |||||||||||| |  | ||||||||||| |||||||||||||||    
T  24193574 ggattttaaaagacttttttgttttaaaaaagtcttggggtattcaatcaaga 24193626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 146)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 20498191 - 20498439
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||| ||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  20498191 aaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 20498290  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20498291 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 20498390  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20498391 gaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 20498439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 996310 - 996062
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| ||||| |||||| |||||||||||| ||||||||||||||| |||||||| |||        ||||||||||    
T  996310 aaaaagtcttgtgttattcaatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggta 996211  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  996210 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 996111  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  996110 gaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 996062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 10139370 - 10139122
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| || || |||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  10139370 aaaaagtcttgtgttattcaatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 10139271  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10139270 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 10139171  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10139170 gaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 10139122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 19253809 - 19254057
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  19253809 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 19253908  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19253909 ttcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 19254008  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  19254009 gaaaacatgagatttcttaggattgtttttttctt-ttaaaattttacta 19254057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 313 - 559
Target Start/End: Complemental strand, 3999869 - 3999624
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  3999869 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggta 3999770  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  3999769 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcat 3999670  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagatttta 559  Q
     |||||||||||||||||||||||||||||||||| |||||||||||    
T  3999669 aaaaacatgagatttcttaggattgtttttttctt-ttaagatttta 3999624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 260 - 531
Target Start/End: Complemental strand, 33996810 - 33996547
Alignment:
Q  260 aggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 359  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        |||||||||||| |||||||||||| ||||||    
T  33996810 aggggtgtattggatcatgattctaagggattttgaaagacttttttatcatgaaaaagt--------attcaatcaagattctttgtcatttaaaaaaa 33996719  T
Q  360 gtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 459  Q
    |||||| |||||||||||||||||||||||| |||        || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33996718 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 33996619  T
Q  460 gatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttctta 531  Q
    ||| ||||||| ||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||    
T  33996618 gatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagatttctta 33996547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 6589546 - 6589795
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||| | || ||||||||| |||||||||||| ||||||||||||||||||||||||  ||        ||||||||||    
T  6589546 aaaaagtcttgtgttattcaatcaatattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggta 6589645  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6589646 ttcaaaatcattcaaatttcgaagaattatttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 6589745  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6589746 gaaaacatgagatttcttaggattgtttttttctttttaagattttacta 6589795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 29449082 - 29448833
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| || |||||||||  ||||||||||| | ||||||||||||||||| |||| |||        ||||||||||    
T  29449082 aaaaagtcttgtgttattcaatcaagattccttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggta 29448983  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||| |||||||||    
T  29448982 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcat 29448883  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29448882 gaaaacatgagatttcttaggattgtttttttctttttaagattttacta 29448833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 37820701 - 37820453
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||| ||||| ||||||||||||||| |||||||| |||        ||||||||||    
T  37820701 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggta 37820602  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  37820601 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcat 37820502  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
     |||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  37820501 aaaaacatgagatttcttaagattgtttttttctt-ttaagattttacta 37820453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 35337717 - 35337963
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  35337717 aaaaagtcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 35337816  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||    
T  35337817 ttcaaaaaaattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcat 35337915  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  35337916 gaaaacatgagattt-ttaggattgtttttttctt-ttaagattttacta 35337963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 313 - 539
Target Start/End: Complemental strand, 33808023 - 33807796
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt-tctagtggt 411  Q
    ||||||||||||| |||||||| |||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||         |||||||||    
T  33808023 aaaaagtcttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggt 33807924  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca 511  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33807923 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 33807824  T
Q  512 tgaaaacatgagatttcttaggattgtt 539  Q
    ||||||||||||||||||||||||||||    
T  33807823 tgaaaacatgagatttcttaggattgtt 33807796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 3206420 - 3206181
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||| |||||         ||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  3206420 aaaaagtcttgtggtattcaatcaagattcttt---------aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 3206330  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  3206329 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcat 3206230  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  3206229 gaaaacatgagatttcttatgattgtttttttctt-ttaagattttacta 3206181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 44762261 - 44762011
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||||||| ||  ||||||||||||||||||||||| |||        ||||||||||    
T  44762261 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 44762162  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    || ||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||| ||    
T  44762161 tttaaaattattcaagtttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttttat 44762062  T
Q  513 gaaaacatgagatttcttaggattgttt-ttttcttcttaagattttacta 562  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  44762061 gaaaacatgagatttcttaagattgttttttttctttttaagattttacta 44762011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 25418348 - 25418595
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| |||||| |||        ||||| ||||    
T  25418348 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggta 25418447  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| || ||||||    
T  25418448 ttcaaaatcattcaaatttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcat 25418547  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  25418548 gaaaacatgagattccttaggattg-ttttttctt-ttaagattttacta 25418595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 40246826 - 40247073
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||| ||||||| ||||||||||||| |||||||||||| |||||||| ||| ||||||||||||||||| ||||||  ||        ||||||||||    
T  40246826 aaaaaatcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggta 40246925  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  40246926 ttcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcat 40247025  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||||||| |||| ||||| ||||||||| ||||||||||||||    
T  40247026 gaaaacatgagattccttatgattg-ttttttctt-ttaagattttacta 40247073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 313 - 558
Target Start/End: Original strand, 54625574 - 54625818
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||| | || ||||||||| |||||| |||||  ||||||||||||||||||||||| |||        ||||||||||    
T  54625574 aaaaagtcttgtgttattcaatcaatattcgttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 54625673  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||    
T  54625674 ttcaaaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcat 54625773  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagatttt 558  Q
    ||||||||||||||||||| ||||| ||||| ||| ||||||||||    
T  54625774 gaaaacatgagatttcttaagattgatttttgctt-ttaagatttt 54625818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 265 - 542
Target Start/End: Original strand, 17946223 - 17946499
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | |||||||  ||||||  ||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17946223 tgtattggattaggattctataggattta-aaagactttttaattatgaaaaagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtctt 17946321  T
Q  365 gaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatag 464  Q
    ||||||||||||||||||| || ||| |||        ||| ||| |||||||||||||||||||||| ||||||||||||||||||  ||||||||| |    
T  17946322 gaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatgg 17946421  T
Q  465 attttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    ||||||||||||||| ||||| ||||||| || ||||| |||||||||||||| ||||||||||||  ||||||||||    
T  17946422 attttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 17946499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 44906737 - 44906508
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  44906737 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 44906638  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||  ||||||||||||||| ||||| ||||||| || |||||||||||||||    
T  44906637 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcat 44906538  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  44906537 gaaaagatgagatttcttgagattgttttt 44906508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 52114510 - 52114759
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt-tctagtggt 411  Q
    ||||| ||||||| ||||||| ||||| |||||||||||| |||||||||||| ||||||||||||||||| |||||| |||         |||||||||    
T  52114510 aaaaaatcttgtgttattcaaccaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggt 52114609  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca 511  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||  |||||      
T  52114610 attcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtggaattttctagtaaaattttagcatgaaaaaatcttttg 52114709  T
Q  512 tgaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  52114710 tgaaaacatgagatttcttaggattatttttttctt-ttaagattttacta 52114759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 329 - 562
Target Start/End: Complemental strand, 53929336 - 53929104
Alignment:
Q  329 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaa 428  Q
    ||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        |||||||||||||||||||||| |||    
T  53929336 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaa 53929237  T
Q  429 tttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttc 528  Q
    | ||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||  ||||| |||||||||||||||||     
T  53929236 tatcgaacgattgtttaataaataagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagatttt 53929137  T
Q  529 ttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||| |||| |||||||||    
T  53929136 ttaggattgtttttttctt-ttaaaattttacta 53929104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 36674354 - 36674125
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  36674354 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 36674255  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  36674254 ttcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 36674155  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  36674154 gaaaagatgagatttcttgagattgttttt 36674125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 324 - 542
Target Start/End: Complemental strand, 6035266 - 6035048
Alignment:
Q  324 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcat 423  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | || ||| |||        ||| ||| |||||||||||||    
T  6035266 tggtattcaatcaagagtctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcat 6035167  T
Q  424 tcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgag 523  Q
    ||||||||||||| | |||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  6035166 tcaaatttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgag 6035067  T
Q  524 atttcttaggattgttttt 542  Q
    |||||||| ||||||||||    
T  6035066 atttcttaagattgttttt 6035048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 34484254 - 34484025
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        | | ||||||    
T  34484254 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggta 34484155  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||  ||||||||    
T  34484154 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcat 34484055  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  34484054 gaaaagatgagatttcttgagattgttttt 34484025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 313 - 530
Target Start/End: Original strand, 40897126 - 40897343
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        |||  |||||    
T  40897126 aaaaagtcttgtggtattcattcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggta 40897225  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  40897226 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcat 40897325  T
Q  513 gaaaacatgagatttctt 530  Q
    ||||| ||||||||||||    
T  40897326 gaaaagatgagatttctt 40897343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 265 - 542
Target Start/End: Original strand, 52810312 - 52810589
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| |  |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  52810312 tgtattggattaggattctatgggattttaaaagactttttaactatgaaaaagtgttgtggtattcaatcaagactctttgtcattttaaaaaagtttt 52810411  T
Q  365 gaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatag 464  Q
    ||||||||||||||||||| || |||  ||        ||| ||||||||||||||||||||||||| ||| |||||||||||||||   |||||||| |    
T  52810412 gaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaatgattgtttaataaattgaattttgatgg 52810511  T
Q  465 attttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    ||||||||||||||| ||| | ||||||| || |||||  ||||||||||||| ||||||||||||  ||||||||||    
T  52810512 attttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgttttt 52810589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 11431508 - 11431737
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  11431508 aaaaagtcttgtggtattcaataaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 11431607  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||| | |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  11431608 ttcaaaatcatttaaatttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 11431707  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  11431708 gaaaagatgagatttcttgagattgttttt 11431737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 312 - 529
Target Start/End: Original strand, 29029987 - 29030203
Alignment:
Q  312 gaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggt 411  Q
    |||||||||||||| |||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||       | || |||||    
T  29029987 gaaaaagtcttgtgttattcaattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaagt-cttgtggt 29030085  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca 511  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||| ||||||  | | ||| |    
T  29030086 attcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtggaattttctaatgaaattttaacatgaatttttttttta 29030185  T
Q  512 tgaaaacatgagatttct 529  Q
    ||||||||||||||||||    
T  29030186 tgaaaacatgagatttct 29030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 313 - 522
Target Start/End: Complemental strand, 51699703 - 51699495
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||  ||||||||||||| |||||||||||| |||||| ||||| |||||||||||||||||||||||| |||       | |||||||||    
T  51699703 aaaaagtcttgtattattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaat-ctagtggta 51699605  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||  |||||| |    
T  51699604 ttcaaaatcattcaaatttcgaaggattggttaataaataagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatctttcgt 51699505  T
Q  513 gaaaacatga 522  Q
    ||||||||||    
T  51699504 gaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 256 - 542
Target Start/End: Complemental strand, 10728922 - 10728646
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||| |||||||||| |  |||||| || ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  10728922 taagggggatgtattggattagcattctatggaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 10728823  T
Q  356 aaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga 455  Q
    |||||||||||||||||||||||||||| || ||| |||        ||| |||||||| |||||||||||||||| |||||||||||||||||||  ||    
T  10728822 aaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaatcattcaaatttggaaggattgtttaataaattgga 10728723  T
Q  456 ttttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    |||||||          ||||||| ||||| ||||||| || ||||| |||||||||||||| ||||||||||||  ||||||||||    
T  10728722 ttttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 10728646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 54628825 - 54629055
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt-tctagtggt 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |           ||| |||||    
T  54628825 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacaaaaaaaaaaatcttgtggt 54628924  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca 511  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| ||||||||    
T  54628925 attcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 54629024  T
Q  512 tgaaaacatgagatttcttaggattgttttt 542  Q
    | |||| ||||||||||||  ||||||||||    
T  54629025 taaaaagatgagatttcttgagattgttttt 54629055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 329 - 542
Target Start/End: Original strand, 48379155 - 48379368
Alignment:
Q  329 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaa 428  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||| |||        ||| ||||||||||||||||||||||    
T  48379155 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaa 48379254  T
Q  429 tttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttc 528  Q
    |||||||||||||||||||||||   |||||||| |||||||||||||||| ||||| |||||||  | |||||||||||||||||||| || |||||||    
T  48379255 tttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagatcagatttc 48379354  T
Q  529 ttaggattgttttt 542  Q
    ||  ||||||||||    
T  48379355 ttgagattgttttt 48379368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 51737951 - 51737721
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggt 411  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| || ||| |||        ||| |||||    
T  51737951 aaaaagtcttgtggtattcaatcaagactctttatcattttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggt 51737852  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca 511  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| | ||| ||||||| || ||||| ||||||||    
T  51737851 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtctttca 51737752  T
Q  512 tgaaaacatgagatttcttaggattgttttt 542  Q
    | |||| || ||  |||||  ||||||||||    
T  51737751 taaaaagataagtattcttgagattgttttt 51737721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 52618189 - 52617966
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  52618189 aaaaagtcatgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 52618090  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||      || | |||||||||    
T  52618089 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttt------aacaagtctttcat 52617996  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
     |||| ||||||||||||  ||||||||||    
T  52617995 aaaaagatgagatttcttgagattgttttt 52617966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 18749594 - 18749823
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||| ||||||||||||| ||| ||  ||| |||||||||||||||||||||||||| || ||| || ||| |||        ||| ||||||    
T  18749594 aaaaagtcttgaggtattcaatcaaaacttttcatcactttaaaaaagtcttgaggtattcaataaaaacttttcatcacttaaaaaaagtcttgtggta 18749693  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  18749694 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 18749793  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  18749794 gaaaagatgagatttcttgagattgttttt 18749823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 321 - 542
Target Start/End: Original strand, 32580167 - 32580387
Alignment:
Q  321 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaat 420  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||| || |||  ||        ||| ||||||||||||||    
T  32580167 ttgtggtattcgatcaaggctctttgtcattttaaaaaagtcttgaggtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 32580265  T
Q  421 cattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacat 520  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||||| |||||||| ||||| ||||||| || ||||| |||||||||||||| ||    
T  32580266 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 32580365  T
Q  521 gagatttcttaggattgttttt 542  Q
    ||||||||||  ||||||||||    
T  32580366 gagatttcttgagattgttttt 32580387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 313 - 539
Target Start/End: Complemental strand, 31646508 - 31646284
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| || |||  ||        ||| ||||||    
T  31646508 aaaaagtcttatggtattcaatcaagactctttgttattttaaaaaagtcttgacgtattcaatcaagacttttcatcatttaaaaaaaatcttgtggta 31646409  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||| ||||||||||| |||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  31646408 ttcaaaatcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 31646309  T
Q  513 gaaaacatgagatttcttaggattgtt 539  Q
    ||||  ||||||||||||  |||||||    
T  31646308 gaaa--atgagatttcttgagattgtt 31646284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 26107242 - 26107472
Alignment:
Q  313 aaaaagtctt-gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggt 411  Q
    |||||||||| || ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| |||||    
T  26107242 aaaaagtcttagtcgtactcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggt 26107341  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca 511  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||| |||||| ||||| ||||||| || ||||| || |||||    
T  26107342 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttca 26107441  T
Q  512 tgaaaacatgagatttcttaggattgttttt 542  Q
    | |||| ||||||||||||  ||||||||||    
T  26107442 taaaaagatgagatttcttgagattgttttt 26107472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 50903467 - 50903235
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt---tctagtg 409  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||  ||           ||| |||    
T  50903467 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtg 50903368  T
Q  410 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtcttt 509  Q
    |||||||||||||||||||||  |||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||  |||||    
T  50903367 gtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttt 50903268  T
Q  510 catgaaaacatgagatttcttaggattgttttt 542  Q
     ||||||| ||||||||||||  ||||||||||    
T  50903267 tatgaaaatatgagatttcttgagattgttttt 50903235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 313 - 502
Target Start/End: Original strand, 22057743 - 22057933
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt-cttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggt 411  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||||   |||| ||||||| |||||||||||| ||| |||        |||||||||    
T  22057743 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaaaacttgtggtattccatcaagactcttgatcacttaaaaaaaatctagtggt 22057842  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaa 502  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  22057843 atttaaaatcattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 408 - 543
Target Start/End: Original strand, 5825139 - 5825274
Alignment:
Q  408 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtct 507  Q
    |||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||| ||||||||||| | ||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  508 ttcatgaaaacatgagatttcttaggattgtttttt 543  Q
    |||||||||||||||||||||||| |||||||||||    
T  5825239 ttcatgaaaacatgagatttcttatgattgtttttt 5825274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 313 - 483
Target Start/End: Complemental strand, 1440177 - 1440006
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggt 411  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||| || ||| |||||||||||||||||||||||| |||        |||||||||    
T  1440177 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggt 1440078  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctag 483  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  1440077 attcaaaatcattcaaatttccaaggattgtttaataaatcagattttgatggattttatgggattttctag 1440006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 426 - 562
Target Start/End: Complemental strand, 1440005 - 1439869
Alignment:
Q  426 aaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagat 525  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | ||||||| |||||||| |||||||||||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagat 1439906  T
Q  526 ttcttaggattgtttttttcttcttaagattttacta 562  Q
    || ||||||||||||||||||| ||||||||||||||    
T  1439905 tttttaggattgtttttttctttttaagattttacta 1439869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 264 - 561
Target Start/End: Original strand, 27899277 - 27899560
Alignment:
Q  264 gtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtct 363  Q
    ||||||| ||| ||||||||||  |||||| |||||||||||||| ||||||   | ||||||||||||||  ||| |||||   | || |||||||||     
T  27899277 gtgtattagattatgattctaaatgattttaaaagacttttttattatgaaatttttttgtggtattcaattcagattctttccaacttaaaaaaagtca 27899376  T
Q  364 tgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgata 463  Q
    |  ||||||||||||||||||||  ||  ||        ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  27899377 tatggtattcaatcaagactctttgtcatttaaaaaaagtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg--- 27899473  T
Q  464 gattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgtttttttcttcttaagattttact 561  Q
           | |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||    ||||||||||||||||    
T  27899474 -------taggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttatgattgtttt----ttcttaagattttact 27899560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 314 - 526
Target Start/End: Original strand, 20832975 - 20833187
Alignment:
Q  314 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtat 413  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | || ||| |||        ||| |||||||    
T  20832975 aaaagtctcgtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtat 20833074  T
Q  414 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatg 513  Q
    |||||||||||||||||  |||||||||||||||||||  ||||||||| ||||||||| |||||  ||||| ||||||| || ||||| || |||||||    
T  20833075 tcaaaatcattcaaattcggaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatg 20833174  T
Q  514 aaaacatgagatt 526  Q
    |||| || |||||    
T  20833175 aaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 261 - 386
Target Start/End: Complemental strand, 3206514 - 3206389
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||| |||||||    
T  3206514 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaag 3206415  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| ||||||||||||||| ||||    
T  3206414 tcttgtggtattcaatcaagattctt 3206389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 313 - 471
Target Start/End: Original strand, 10660517 - 10660675
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        | | ||||||    
T  10660517 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggta 10660616  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgt 471  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  10660617 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 10660675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 313 - 460
Target Start/End: Complemental strand, 23753610 - 23753463
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  23753610 aaaaagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 23753511  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 460  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  23753510 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 23753463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 261 - 386
Target Start/End: Complemental strand, 996403 - 996279
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  || || |||||||    
T  996403 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt-ccaattaaaaaaag 996305  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  996304 tcttgtgttattcaatcaagattctt 996279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 449 - 562
Target Start/End: Complemental strand, 6131321 - 6131210
Alignment:
Q  449 aatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgtttttttcttc 548  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||     
T  6131321 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtt-ttttctt- 6131224  T
Q  549 ttaagattttacta 562  Q
    ||||||||||||||    
T  6131223 ttaagattttacta 6131210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 19253715 - 19253840
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||| |||||||    
T  19253715 ggggtttattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 19253814  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  19253815 tcttgtgttattcaatcaagattctt 19253840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 321 - 530
Target Start/End: Original strand, 39038030 - 39038229
Alignment:
Q  321 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaat 420  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||| ||||||    
T  39038030 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaat 39038129  T
Q  421 cattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacat 520  Q
    |||||||||||||||| ||||||||||||||  ||||||||| ||||||||          |||| ||||||| || ||||| ||||||||| |||| ||    
T  39038130 cattcaaatttcgaagaattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcataaaaagat 39038219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 321 - 542
Target Start/End: Original strand, 37454851 - 37455062
Alignment:
Q  321 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaat 420  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| || |||  ||        ||| ||||||||||||||    
T  37454851 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 37454950  T
Q  421 cattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacat 520  Q
    ||||||||||||||| ||||||||||||||       ||||   ||||||||||||||| ||||| ||||||| || ||||| || ||||||||||| ||    
T  37454951 cattcaaatttcgaatgattgtttaataaa-------ttga---attttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagat 37455040  T
Q  521 gagatttcttaggattgttttt 542  Q
    ||||||||||  ||||||||||    
T  37455041 gagatttcttgagattgttttt 37455062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 50762274 - 50762055
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || ||   ||        ||| ||||||    
T  50762274 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcatgacttttcataatttaaaaaaagtcttgtggta 50762175  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||| ||||||||| |||||||| ||||||  |||||||||          ||||||| ||||| ||||||| || ||||| |||||||||    
T  50762174 ttcaaaatcattctaatttcgaatgattgtttgataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcat 50762085  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  50762084 gaaaagatgagatttcttgagattgttttt 50762055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 261 - 381
Target Start/End: Complemental strand, 10139464 - 10139344
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||   |||| |||||||    
T  10139464 ggggtgtattgaatcatgattctaagggattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 10139365  T
Q  361 tcttgaggtattcaatcaaga 381  Q
    ||||| | |||||||||||||    
T  10139364 tcttgtgttattcaatcaaga 10139344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 262 - 386
Target Start/End: Complemental strand, 37820794 - 37820670
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    |||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||    
T  37820794 gggtatattggataatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 37820695  T
Q  362 cttgaggtattcaatcaagactctt 386  Q
    |||| | ||||||||||||| ||||    
T  37820694 cttgtgttattcaatcaagattctt 37820670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 44276371 - 44276586
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| | || ||| |||        |||  |||||    
T  44276371 aaaaagtcttgtggtattcaattaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggta 44276470  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||    |||||||||||||||||          | |||||||||||||||||||||||||||||| || |||||  ||||||||    
T  44276471 ttcaaaatcattcaaatt----aggattgtttaataaat----------tggattttgtgggattttctagtgaaattttaacaagaaaaaatctttcat 44276556  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||| ||||||||||| || ||||| |||||    
T  44276557 gaagacatgagattttttgggattattttt 44276586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 20498098 - 20498222
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||   |||| |||||||    
T  20498098 ggggtgtattggatcatgattctaagggattttaaaagactttt-tatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 20498196  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    | ||| | ||||||||||||| ||||    
T  20498197 ttttgtgttattcaatcaagattctt 20498222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 12734158 - 12734076
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactct 343  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12734158 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactct 12734076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 10660427 - 10660548
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||| |||||||||||    
T  10660427 tgtattggattaagattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 10660526  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  10660527 gtggtattcaatcaagactctt 10660548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 261 - 381
Target Start/End: Original strand, 35337622 - 35337743
Alignment:
Q  261 ggggtgtattgga-tcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 359  Q
    |||||||||| || |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||   |||| ||||||    
T  35337622 ggggtgtatttgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 35337721  T
Q  360 gtcttgaggtattcaatcaaga 381  Q
    |||||| | |||||||||||||    
T  35337722 gtcttgtgttattcaatcaaga 35337743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 36674444 - 36674323
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||| |||||||||||    
T  36674444 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 36674345  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  36674344 gtggtattcaatcaagactctt 36674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 40246732 - 40246857
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    |||||||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||| |  ||| ||||||     
T  40246732 ggggtgtattggatcatgattctaagagattttaaaaaacttttttatcgtgaaaaagtcttgtggtattcaatcaagactctttctggtttaaaaaaaa 40246831  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  40246832 tcttgtgttattcaatcaagattctt 40246857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 403 - 562
Target Start/End: Original strand, 52079999 - 52080142
Alignment:
Q  403 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaa 502  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||          |||||||||||||||||||| |||||||||||||||||||    
T  52079999 tctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatc----------agattttgtgggattttctaatgaaattttagcatgaaaa 52080088  T
Q  503 tgtctttcatgaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
     ||      |||||||||||||||||||||||||||||||||  | ||||||||||||||    
T  52080089 agt------tgaaaacatgagatttcttaggattgttttttttcttttaagattttacta 52080142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 265 - 379
Target Start/End: Original strand, 6589455 - 6589570
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagactttt-ttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtct 363  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||| |||||||||| | |||| ||||||||||    
T  6589455 tgtattggatcatgattctaagggactttaaaagactttttttatcatgaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaaagtct 6589554  T
Q  364 tgaggtattcaatcaa 379  Q
    || | |||||||||||    
T  6589555 tgtgttattcaatcaa 6589570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 313 - 519
Target Start/End: Original strand, 6975731 - 6975924
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  6975731 aaaaagtcttgtggtattcaatcaagactctttgttatttt-aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaag--tcttgtggta 6975827  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||| ||| |||| |||||          | || |||||||||||||||||| |||||| |||||||||  |||||||||    
T  6975828 ttcaaaatcattcaaatttcgaagaattatttactaaat----------tggaatttgtgggattttctagtaaaatttgagcatgaaacagtctttcat 6975917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 1440265 - 1440146
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||| ||||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  1440265 tgtattgggtcatgattctaagagattttaaaatacttttt-atcatgaaaaagtcttgtggtattcaatcaagactattt-tcaatttaaaaaagtctt 1440168  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | | ||||||||||||| ||||    
T  1440167 gtgttattcaatcaagattctt 1440146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 23753700 - 23753579
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | |||||||  ||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||| |||||||||||    
T  23753700 tgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 23753601  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||| ||||    
T  23753600 gtggtattcaatcaagattctt 23753579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 27240557 - 27240436
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| | |||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  | || |||||||||||    
T  27240557 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 27240458  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  27240457 gtggtattcaatcaagactctt 27240436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 29029898 - 29030019
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||| | |||||||||||||||||||||| || | |||   ||||||||||    
T  29029898 tgtattggatcatgattctaagggattttaaaagacttttatatcatgaaaaaatattgtggtattcaatcaagactcattctaattaagaaaaagtctt 29029997  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | | |||||||| |||||||||    
T  29029998 gtgttattcaattaagactctt 29030019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 313 - 502
Target Start/End: Original strand, 55235168 - 55235356
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||| || |||||||| |||| |||||||||||||||||  ||||||||||||||| |||||| |||  ||       | ||  || ||    
T  55235168 aaaaagtcttgtggtctttaatcaagattctt-gtcattttaaaaaagtcacgaggtattcaatcaaaactcttcatcaattaaaaaagt-ctcatgata 55235265  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgataga-ttttgtgggattttctagtgaaattttagcatgaaaa 502  Q
    ||||||||||||||||||||||| |||||||||||||||  | ||||||| || ||||||||||||||||| |||||||||||||| ||||    
T  55235266 ttcaaaatcattcaaatttcgaaagattgtttaataaattggtttttgatggatttttgtgggattttctaatgaaattttagcataaaaa 55235356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 282 - 386
Target Start/End: Complemental strand, 44762334 - 44762230
Alignment:
Q  282 ctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 381  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||   |||| |||||||||||| | |||||||||||||    
T  44762334 ctaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 44762235  T
Q  382 ctctt 386  Q
     ||||    
T  44762234 ttctt 44762230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 263 - 386
Target Start/End: Original strand, 18749460 - 18749583
Alignment:
Q  263 ggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtc 362  Q
    |||||||||||| | |||||||  | ||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  | || |||||||||    
T  18749460 ggtgtattggattaggattctatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtc 18749559  T
Q  363 ttgaggtattcaatcaagactctt 386  Q
    ||| ||||||||||||||||||||    
T  18749560 ttgtggtattcaatcaagactctt 18749583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 267 - 386
Target Start/End: Complemental strand, 44906825 - 44906706
Alignment:
Q  267 tattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttga 366  Q
    |||||||| | ||||||| | |||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  | || ||||||||||||     
T  44906825 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgt 44906726  T
Q  367 ggtattcaatcaagactctt 386  Q
    ||||||||||||||||||||    
T  44906725 ggtattcaatcaagactctt 44906706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 18749552 - 18749618
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 379  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18749552 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 18749618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 256 - 386
Target Start/End: Complemental strand, 31646607 - 31646477
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||| ||||||| || | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  | || ||    
T  31646607 taagggggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaa 31646508  T
Q  356 aaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||  ||||||||||||||||||||    
T  31646507 aaaagtcttatggtattcaatcaagactctt 31646477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 256 - 386
Target Start/End: Complemental strand, 50903566 - 50903436
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||| ||||||| || ||||||||| |||||||| ||| ||||||| |  |||||||||||||||||||||||||||||||| ||||  | || ||    
T  50903566 taagggggatgtattgaattatgattctatgggattttaaaatactttttaagtatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaa 50903467  T
Q  356 aaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||| ||||||||||||||||||||    
T  50903466 aaaagtcttgtggtattcaatcaagactctt 50903436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 11431418 - 11431539
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | |||||||   |||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||| |||||||||||    
T  11431418 tgtattggattaggattctataagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 11431517  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | |||||||||| |||||||||    
T  11431518 gtggtattcaataaagactctt 11431539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 50762364 - 50762243
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | |||| || |||||||| ||||||||||| || |||||||||| ||||||||||||||||||||| ||||  | || |||||||||||    
T  50762364 tgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtattgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 50762265  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  50762264 gtggtattcaatcaagactctt 50762243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 261 - 381
Target Start/End: Complemental strand, 29449178 - 29449056
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttt--aaaaa 358  Q
    |||||||||| |||||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||||||| |||||||   | |||  |||||    
T  29449178 ggggtgtattagatcatgattataagggattttaaaagacttttttattatgaaaaaatcttgtggtattcaatcaatactctttccaaatttaaaaaaa 29449079  T
Q  359 agtcttgaggtattcaatcaaga 381  Q
    ||||||| | |||||||||||||    
T  29449078 agtcttgtgttattcaatcaaga 29449056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 261 - 386
Target Start/End: Complemental strand, 33808120 - 33807992
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttg---tggtattcaatcaagactctttgtcattttaaaa 357  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||   |||||||||||||| | |||||   |||| ||||    
T  33808120 ggggtgtattgaatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtggtattcaatcaaaattcttttcaatttaaaaa 33808021  T
Q  358 aagtcttgaggtattcaatcaagactctt 386  Q
    |||||||| | |||||||| |||| ||||    
T  33808020 aagtcttgtgttattcaattaagattctt 33807992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 261 - 386
Target Start/End: Complemental strand, 51699797 - 51699672
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||| |||  |||||| ||||| |||||||||| |||||| | |||||||||||||||||||||||||   |||| |||||||    
T  51699797 ggggtgtattggatcatgattataaaagattttaaaagatttttttatcaagaaaaaattttgtggtattcaatcaagactcttttcaatttaaaaaaag 51699698  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    |||||   ||||||||||||| ||||    
T  51699697 tcttgtattattcaatcaagattctt 51699672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 22057651 - 22057774
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagac-ttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 359  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||     |||||   |||| ||||||    
T  22057651 ggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtattgtggtattcaatc---gttctttccaatttaaaaaaa 22057747  T
Q  360 gtcttgaggtattcaatcaagactctt 386  Q
    |||||| | ||||||||||||| ||||    
T  22057748 gtcttgtgttattcaatcaagattctt 22057774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 278 - 386
Target Start/End: Original strand, 54628748 - 54628856
Alignment:
Q  278 gattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatc 377  Q
    ||||||| | |||||| ||||||||||| || ||||||| |||||||||||||||||||||||| ||||  | || |||||||||||| |||||||||||    
T  54628748 gattctatgagattttaaaagactttttaattatgaaaacgtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatc 54628847  T
Q  378 aagactctt 386  Q
    |||||||||    
T  54628848 aagactctt 54628856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 25418254 - 25418379
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttt-aaaaaa 359  Q
    ||||| |||||||||||||||||||| |||||| ||| | ||||||||||||||||  | ||||||||||||||||| |||||||  |||||| ||||||    
T  25418254 ggggtttattggatcatgattctaagagattttaaaaaatttttttatcatgaaaattttttgtggtattcaatcaaaactcttt-ccattttaaaaaaa 25418352  T
Q  360 gtcttgaggtattcaatcaagactctt 386  Q
    |||||| | ||||||||||||| ||||    
T  25418353 gtcttgtgttattcaatcaagattctt 25418379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 313 - 431
Target Start/End: Original strand, 12103611 - 12103729
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| | || ||| |||        |||  |||||    
T  12103611 aaaaagtctcgtggtattcaattaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggta 12103710  T
Q  413 ttcaaaatcattcaaattt 431  Q
    |||||||||||||||||||    
T  12103711 ttcaaaatcattcaaattt 12103729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 265 - 542
Target Start/End: Complemental strand, 39842743 - 39842489
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||| ||||||||||||||||||||| ||||  | || ||||||         
T  39842743 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaa----- 39842649  T
Q  365 gaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatag 464  Q
            ||||||||| | || ||| |||        ||| ||| |||||||||||||||||||||||||| ||||||||||||||          |||    
T  39842648 --------caatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaat----------tag 39842567  T
Q  465 attttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    ||||||  ||||||| || || ||||||| || ||||| |||||||||||||| |||||||||||| |||||||||||    
T  39842566 attttgacggattttgtaatgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgggattgttttt 39842489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 260 - 337
Target Start/End: Original strand, 52114417 - 52114494
Alignment:
Q  260 aggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 337  Q
    ||||||||| |||||||||||||||||| ||||| ||||| ||||||||||||| |||||||||||||||||||||||    
T  52114417 aggggtgtactggatcatgattctaaggaattttaaaagatttttttatcatgataaagtcttgtggtattcaatcaa 52114494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 52618279 - 52618158
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||| ||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||| ||||||| | ||||| | || ||||||||| |    
T  52618279 tgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaagattttttgtaacttaaaaaaagtcat 52618180  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | | ||||||||||||||||||    
T  52618179 gtgatattcaatcaagactctt 52618158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 262 - 379
Target Start/End: Original strand, 54625481 - 54625598
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    ||||||||||||||||||||||||| ||||||  |||| |||||||||||||||   | |||| ||||||||||||||||||||   |||| ||||||||    
T  54625481 gggtgtattggatcatgattctaagagattttagaagatttttttatcatgaaatttttttgtagtattcaatcaagactctttccaatttaaaaaaagt 54625580  T
Q  362 cttgaggtattcaatcaa 379  Q
    |||| | |||||||||||    
T  54625581 cttgtgttattcaatcaa 54625598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 260 - 372
Target Start/End: Complemental strand, 539700 - 539588
Alignment:
Q  260 aggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 359  Q
    |||| |||||||||| | | ||||||| |||||| ||||| ||||| || ||||||||| |||||||||||||||||| ||||||||| |||| ||||||    
T  539700 agggatgtattggattagggttctaagagattttaaaagattttttaattatgaaaaagccttgtggtattcaatcaaaactctttgtaatttaaaaaaa 539601  T
Q  360 gtcttgaggtatt 372  Q
    |||||| ||||||    
T  539600 gtcttgtggtatt 539588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 283 - 386
Target Start/End: Original strand, 2024117 - 2024220
Alignment:
Q  283 taagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagac 382  Q
    |||| |||||| ||| | |||||||| |||||||||||||||||||||||||||||||| |||||||||| |||| | ||||| | |||| |||||||||    
T  2024117 taagagattttaaaatatttttttattatgaaaaagtcttgtggtattcaatcaagactatttgtcatttaaaaataatcttgtgatatttaatcaagac 2024216  T
Q  383 tctt 386  Q
    ||||    
T  2024217 tctt 2024220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 313 - 372
Target Start/End: Complemental strand, 27240467 - 27240408
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtatt 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27240467 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtatt 27240408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 6131395 - 6131318
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatc 390  Q
    ||||||| ||||| |||||||||||||||| ||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  6131395 aaaaagttttgtgttattcaatcaagactcattgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatc 6131318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 262 - 367
Target Start/End: Original strand, 38772266 - 38772371
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    ||||||||| ||| | |||||| || |||||| |||||||||||  | |||||||||||||||||||||||||||||| ||||||| | || ||||||||    
T  38772266 gggtgtattagattaggattctgagagattttaaaagactttttatttatgaaaaagtcttgtggtattcaatcaagattctttgtaacttaaaaaaagt 38772365  T
Q  362 cttgag 367  Q
    ||||||    
T  38772366 cttgag 38772371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 265 - 375
Target Start/End: Complemental strand, 15494045 - 15493934
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattt-taaaaaagtct 363  Q
    |||||||||| || ||||||||||||||| ||||||||||| || |||||||| |||||| ||||| |||||||||||||||  ||||  |||||||| |    
T  15494045 tgtattggattataattctaagggattttaaaagactttttaattatgaaaaaatcttgtagtatttaatcaagactctttgcaatttaaaaaaaagttt 15493946  T
Q  364 tgaggtattcaa 375  Q
    || |||||||||    
T  15493945 tgtggtattcaa 15493934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 484 - 539
Target Start/End: Complemental strand, 33807733 - 33807678
Alignment:
Q  484 tgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgtt 539  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33807733 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtt 33807678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 40897035 - 40897157
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaag-tcttgtggtattcaatcaagactctttgtcattttaaaaaagtct 363  Q
    |||||||||| | ||||||| |||||||| ||| ||||||| || ||||||||  ||||||||||||||||||||| | ||||  | || ||||||||||    
T  40897035 tgtattggattaggattctatgggattttaaaacactttttaattatgaaaaaaatcttgtggtattcaatcaagattttttgcaacttaaaaaaagtct 40897134  T
Q  364 tgaggtattcaatcaagactctt 386  Q
    || |||||||| |||||||||||    
T  40897135 tgtggtattcattcaagactctt 40897157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 51738039 - 51737920
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| | |||||| ||||||||||| || |||||||| |||||||||||||||  |||||| || |  | || |||||||||||    
T  51738039 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtattcaa--aagacttttagcaacttaaaaaaagtctt 51737942  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  51737941 gtggtattcaatcaagactctt 51737920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 267 - 386
Target Start/End: Original strand, 6975643 - 6975762
Alignment:
Q  267 tattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttga 366  Q
    |||||||| | ||||||| |  ||||| ||| | ||||| || |||||||||||||||| ||||||   |||||||||||| | || ||||||||||||     
T  6975643 tattggattaggattctatgaaattttaaaatattttttaatgatgaaaaagtcttgtgatattcagcgaagactctttgtaacttaaaaaaagtcttgt 6975742  T
Q  367 ggtattcaatcaagactctt 386  Q
    ||||||||||||||||||||    
T  6975743 ggtattcaatcaagactctt 6975762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 355 - 462
Target Start/End: Complemental strand, 539586 - 539479
Alignment:
Q  355 aaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 454  Q
    ||||||||||||||||||||||||||| | || |||  ||        ||| |||||||||||||||||||||||||||||||||| ||||||||||  |    
T  539586 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 539487  T
Q  455 attttgat 462  Q
    ||||||||    
T  539486 attttgat 539479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 288 - 386
Target Start/End: Original strand, 12103545 - 12103642
Alignment:
Q  288 gattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||| ||||||||||| || |||||| |||||||| |||||||||||| ||||||||| | ||||||||||||| | |||||||||| |||| ||||    
T  12103545 gattttaaaagactttttaattatgaaatagtcttgttgtattcaatcaatactctttgt-aatttaaaaaagtctcgtggtattcaattaagattctt 12103642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 16010751 - 16010805
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaa 315  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  16010751 ggggtgtattggatcataattctaagggattttaaaagacttttttatcatgaaa 16010805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 44276329 - 44276402
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||| ||||||||||||| |||||||||||| |||| |||||||||||| |||||||||| || ||||||    
T  44276329 aaaaagtcatgtggtattcaattaagactctttgtaatttaaaaaaagtcttgtggtattcaattaaaactctt 44276402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 6131486 - 6131411
Alignment:
Q  305 ttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 381  Q
    ||||||||||||||| |||||||||||||||||||||||||  || || |||||||||||| | |||||||||||||    
T  6131486 ttatcatgaaaaagttttgtggtattcaatcaagactcttt-ccaattgaaaaaagtcttgtgttattcaatcaaga 6131411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 336 - 379
Target Start/End: Complemental strand, 15493061 - 15493018
Alignment:
Q  336 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15493061 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 15493018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 20832887 - 20833005
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| | |||||| ||||| ||||| || |||||||||| ||||||||||||||||||| | ||||| | ||   ||||||||     
T  20832887 tgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagttttgtggtattcaatcaagattttttgtaactt---aaaagtctc 20832983  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | |||||| |||||||||||||    
T  20832984 gtggtatttaatcaagactctt 20833005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 364
Target Start/End: Original strand, 26107141 - 26107251
Alignment:
Q  253 aactaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattt 352  Q
    ||||||| ||| |||||||||| | ||||||| | |||||| ||||| ||||| || |||||||||||||||  ||||||||||||||| |||| ||  |    
T  26107141 aactaagggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtaatattcaatcaagactttttg-caact 26107239  T
Q  353 taaaaaagtctt 364  Q
    ||||||||||||    
T  26107240 taaaaaagtctt 26107251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 10105076 - 10105019
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||    
T  10105076 aagggattttaaaagacttttttattataaaaaaatcttgtggtattcaatcaagact 10105019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 10216223 - 10216166
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||||||| ||||| |||||||| || |||||||||||||||||||||||||||||    
T  10216223 aagggattttaaaagatttttttattataaaaaagtcttgtggtattcaatcaagact 10216166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 10225852 - 10225795
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||||||| |||||||||||||| || ||||||||||||| |||||||||||||||    
T  10225852 aagggattttaaaagacttttttattataaaaaagtcttgtgctattcaatcaagact 10225795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 301 - 458
Target Start/End: Complemental strand, 23536047 - 23535890
Alignment:
Q  301 ttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaa-aaagtcttgaggtattcaatcaagactcttaatcgcttnnnnn 399  Q
    |||||||| |||||||||| ||| |||||||||||||||||||||   | || ||| ||| | ||| || |||||||||| |||||| ||| |||         
T  23536047 ttttttattatgaaaaagtattgcggtattcaatcaagactctttacaacttaaaagaaaattttgtggcattcaatcaa-actcttcatcacttaaaaa 23535949  T
Q  400 nnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattt 458  Q
       ||| ||||||||||||||||||||||||| ||||||| ||||||| ||| ||||||    
T  23535948 aagtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 48379050 - 48379170
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| |||||||||  ||||||| ||||||||||| || || ||||||||| ||||||||||||||| | | ||||  | || |||||| ||||    
T  48379050 tgtattggattatgattctataggattttaaaagactttttaattatcaaaaagtctcgtggtattcaatcaaaattttttgcaacttaaaaaaaatctt 48379149  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | | | ||||||||||||||||    
T  48379150 gtgat-ttcaatcaagactctt 48379170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 262 - 386
Target Start/End: Original strand, 55235076 - 55235199
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    ||||||| ||||| | |||||||||| ||||| ||||||||||| || |||||||| | | ||| |||||||||||||| ||||  ||  ||||||||||    
T  55235076 gggtgtagtggattaagattctaaggaattttaaaagactttttaattatgaaaaaatatagtgttattcaatcaagacccttt-acaacttaaaaaagt 55235174  T
Q  362 cttgaggtattcaatcaagactctt 386  Q
    |||| ||| || |||||||| ||||    
T  55235175 cttgtggtctttaatcaagattctt 55235199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 384
Target Start/End: Complemental strand, 6131437 - 6131366
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactc 384  Q
    ||||||||||||| |||||||||||||  | ||||||||| |||||||| ||| | ||||||||||||||||    
T  6131437 aaaaagtcttgtgttattcaatcaagatccattgtcatttaaaaaaagttttgtgttattcaatcaagactc 6131366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 28146318 - 28146264
Alignment:
Q  287 ggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    ||||||| |||||||||||||| ||||||||||| || |||||||||||||||||    
T  28146318 ggattttaaaagacttttttatgatgaaaaagtcatggggtattcaatcaagact 28146264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 53929310 - 53929248
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||||||||||||||||||||||||  ||| || |||||||||| | |||||||||    
T  53929310 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 53929248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 6035370 - 6035293
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaag 338  Q
    |||||||||  ||| | |||| || |||||||| ||||||||||| || |||||||| ||||||||||||||||||||    
T  6035370 ggggtgtatcagattaagattttatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaag 6035293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 542
Target Start/End: Original strand, 45862983 - 45863052
Alignment:
Q  473 ggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    ||||||| ||||| ||||||| || ||||| |||||||||||||| ||||||||||||  ||||||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 45863052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 53929395 - 53929339
Alignment:
Q  302 tttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 359  Q
    |||||||||||||||| | ||||||||||||||||||||||||| ||| |||||||||    
T  53929395 tttttatcatgaaaaaattttgtggtattcaatcaagactcttt-tcaatttaaaaaa 53929339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 386
Target Start/End: Original strand, 44276296 - 44276360
Alignment:
Q  322 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||||||||| ||| ||||| |||| ||||||||| || |||||||||| |||||||||    
T  44276296 tgtggtattcaatcaaaactttttgtaatttaaaaaaagtcatgtggtattcaattaagactctt 44276360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 260 - 359
Target Start/End: Original strand, 52079880 - 52079971
Alignment:
Q  260 aggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 359  Q
    ||||||||||||||||||||||||||| |||||| |||   |||||    |||||||| |||||||||||||||||| || ||||| ||| |||||||||    
T  52079880 aggggtgtattggatcatgattctaagtgattttaaaa---ttttt----atgaaaaaatcttgtggtattcaatcatgattcttt-tcaatttaaaaaa 52079971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 539586 - 539524
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||| ||||||||||||||| | ||  |||||| |||||||||||| |||||||||    
T  539586 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaa 539524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #123
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 542
Target Start/End: Complemental strand, 15492940 - 15492862
Alignment:
Q  464 gattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    |||||||| |||| |||||||||||||||| || |||||  |||||||||||  ||| |||||||||  ||||||||||    
T  15492940 gattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttgagattgttttt 15492862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #124
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 19552233 - 19552155
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    ||||||||||||||   |||| ||| ||||||| ||||| ||||||||  |  ||||||||||||||||||||||||||    
T  19552233 ggggtgtattggattgagattttaaaggattttaaaagatttttttattttataaaagtcttgtggtattcaatcaaga 19552155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #125
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 36055100 - 36055014
Alignment:
Q  253 aactaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    ||||||| ||||||||||||||   ||||  || ||||||| |||||||||||| |  |  ||||||||||||||||||||||||||    
T  36055100 aactaaggggggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaga 36055014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #126
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 37454885 - 37454947
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||| | ||||||||||||||| ||  |||||| |||||||||||| |||||||||    
T  37454885 aaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 37454947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #127
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 371
Target Start/End: Original strand, 39038064 - 39038122
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtat 371  Q
    ||||||||||| ||||||||||||||||| ||  ||| ||||||||||||||| |||||    
T  39038064 aaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtat 39038122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #128
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 10225731 - 10225674
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||| ||||| ||| ||||||| || || |||||||||||||||||||||||||||||    
T  10225731 aaggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaagact 10225674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #129
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 45215463 - 45215410
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 337  Q
    |||||||||| ||||||||||| || || ||||| |||||||||||||||||||    
T  45215463 aagggattttaaaagactttttaataataaaaaaatcttgtggtattcaatcaa 45215410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #130
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 262 - 339
Target Start/End: Complemental strand, 50900531 - 50900454
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    ||||||||||||| | ||||  || ||||||| |||||||||||| |  |  ||||||||||||||||||||||||||    
T  50900531 gggtgtattggattaagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaga 50900454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #131
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 359
Target Start/End: Original strand, 5825042 - 5825088
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 359  Q
    |||| ||||||||||||| ||| ||||||||||||||||| ||||||    
T  5825042 aaaaggtcttgtggtatttaataaagactctttgtcatttaaaaaaa 5825088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #132
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 20833016 - 20833078
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||| ||||||||||||||| | ||  ||| || |||||||||||| |||||||||    
T  20833016 aaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaa 20833078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #133
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 26555813 - 26555891
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    ||||||||||||||   ||||  || ||||||| |||||||||||| |  |  ||||||||||||||||||||||||||    
T  26555813 ggggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaga 26555891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #134
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 388
Target Start/End: Original strand, 27593198 - 27593236
Alignment:
Q  350 ttttaaaaaagtcttgaggtattcaatcaagactcttaa 388  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  27593198 ttttaaaaaagtctttaggtattcaatcaagacttttaa 27593236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #135
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 32580201 - 32580262
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||| |||||||||| |||||| ||  |||||| |||||||||||| |||||||||    
T  32580201 aaaaagtcttgaggtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattcaa 32580262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #136
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 388
Target Start/End: Original strand, 36786017 - 36786055
Alignment:
Q  350 ttttaaaaaagtcttgaggtattcaatcaagactcttaa 388  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  36786017 ttttaaaaaagtctttaggtattcaatcaagacttttaa 36786055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #137
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 44701565 - 44701623
Alignment:
Q  284 aagggattttcaaagac-ttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||||||| |||||| |||||||| ||||||| |||| ||| |||||||||||||||    
T  44701565 aagggattttaaaagacattttttataatgaaaatgtctagtgatattcaatcaagact 44701623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #138
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 46749276 - 46749330
Alignment:
Q  287 ggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    ||||||| ||||| |||||||| || |||||||||||||||| | ||||||||||    
T  46749276 ggattttaaaagatttttttattataaaaaagtcttgtggtaatgaatcaagact 46749330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #139
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 48379181 - 48379243
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||| ||||||||||| ||||| ||  ||| || |||||||||||| |||||||||    
T  48379181 aaaaagtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaa 48379243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #140
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 10104955 - 10104902
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 337  Q
    |||| ||||| ||| ||||||| || || |||||||||||||||||||||||||    
T  10104955 aaggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaa 10104902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #141
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 10216102 - 10216049
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 337  Q
    |||| ||||| ||| ||||||| || || |||||||||||||||||||||||||    
T  10216102 aaggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaa 10216049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #142
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 386
Target Start/End: Complemental strand, 34484260 - 34484223
Alignment:
Q  349 attttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  34484260 atttaaaaaaagtcttgtggtattcaatcaagactctt 34484223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #143
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 529
Target Start/End: Original strand, 12103733 - 12103789
Alignment:
Q  474 gattttctagtgaaattttagcatgaaaatgtctttcatgaaaaca-tgagatttct 529  Q
    |||||||||||||||||||| || ||| | |||||||||||| ||| ||||||||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaagacattgagatttct 12103789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #144
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 30588864 - 30588916
Alignment:
Q  287 ggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    ||||||| |||||||||||| |  |  ||||||||||||||||||||||||||    
T  30588864 ggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaga 30588916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #145
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 38682451 - 38682503
Alignment:
Q  287 ggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    ||||||| |||||||||||| |  | ||||| |||||||||||||||||||||    
T  38682451 ggattttaaaagacttttttgttttaaaaaaatcttgtggtattcaatcaaga 38682503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #146
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 260 - 324
Target Start/End: Complemental strand, 45927035 - 45926971
Alignment:
Q  260 aggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgt 324  Q
    |||||||||||||||   |||| ||| ||||||| ||||||||||| || || ||||||||||||    
T  45927035 aggggtgtattggattgagattttaaaggattttaaaagactttttgattataaaaaagtcttgt 45926971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 181; Significance: 2e-97; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 15257 - 15009
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||||||||||  ||||||||||||||||||||||| |||        ||||||||||    
T  15257 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 15158  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15157 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 15058  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  15057 gaaaacatgaaatttcttaggattgtttttttctt-ttaagattttacta 15009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 256 - 386
Target Start/End: Complemental strand, 15353 - 15226
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||||||||||||||||||||||||||||   || ||||||||||||||||||||||| |||||||||||||||||||||||||||   |||| ||    
T  15353 taaggggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaa 15257  T
Q  356 aaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||| | ||||||||||||| ||||    
T  15256 aaaagtcttgtgttattcaatcaagattctt 15226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 181; Significance: 2e-97; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 15900 - 15652
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||||||||||  ||||||||||||||||||||||| |||        ||||||||||    
T  15900 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 15801  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15800 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 15701  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  15700 gaaaacatgaaatttcttaggattgtttttttctt-ttaagattttacta 15652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 256 - 386
Target Start/End: Complemental strand, 15996 - 15869
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||||||||||||||||||||||||||||   || ||||||||||||||||||||||| |||||||||||||||||||||||||||   |||| ||    
T  15996 taaggggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaa 15900  T
Q  356 aaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||| | ||||||||||||| ||||    
T  15899 aaaagtcttgtgttattcaatcaagattctt 15869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 181; Significance: 2e-97; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 262 - 560
Target Start/End: Original strand, 102026 - 102324
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag- 360  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||| |  ||||||| ||||| ||||||||||||| |||||||||||| |||||||     
T  102026 gggtgtattagatcatgattctaagggattttaaaagacttttttattaa-aaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaaga 102124  T
Q  361 -tcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 459  Q
     ||||| |||||||||||||||||||||||| |||        ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  102125 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagatttt 102224  T
Q  460 gatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgtttttttcttcttaagatttta 559  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||| || |||||||||||    
T  102225 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgagatttcttatgattgtttttttatt-ttaagatttta 102323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 181; Significance: 2e-97; HSPs: 133)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 25331113 - 25331361
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||| ||    
T  25331113 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgata 25331212  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25331213 ttcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 25331312  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25331313 gaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 25331361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 41881307 - 41881056
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt-tctagtggt 411  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||         | |||||||    
T  41881307 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggt 41881208  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca 511  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41881207 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 41881108  T
Q  512 tgaaaacatgagatttcttaggattgtttttttct-tcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||| | | ||||||||||||||    
T  41881107 tgaaaacatgagatttcttaggattgtttttttttcttttaagattttacta 41881056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 12112927 - 12113176
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||| |||||||||| |||        |||| |||||    
T  12112927 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggta 12113026  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||| |||||||||    
T  12113027 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcat 12113126  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||||||    
T  12113127 gaaaacatgagatttcttgggattgtttttttcttttaaagattttacta 12113176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 7007356 - 7007605
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| ||| |||||||| ||||||||| || |||||||||||||||||||||||| |||        ||||||||||    
T  7007356 aaaaagtcttgtgttattcaatcaagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 7007455  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| | ||||||    
T  7007456 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcat 7007555  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||| ||||||||||||  | ||||||||||||||    
T  7007556 gaaaacatgagatttcttaagattgttttttttcttttaagattttacta 7007605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 55302825 - 55303077
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| | ||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||| |||        ||||||||||    
T  55302825 aaaaagtcttgtgtttttcaatcaagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 55302924  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  55302925 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcat 55303024  T
Q  513 gaaaacatgagatttcttaggattgtt-tttttcttc--ttaagattttacta 562  Q
    ||||||||||||||||||| ||||||| ||||| |||  ||||||||||||||    
T  55303025 gaaaacatgagatttcttaagattgttgttttttttcttttaagattttacta 55303077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 32951060 - 32950811
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| | |||||||||| ||||||||| || |||||||||||||||||||||||| |||        ||||||||||    
T  32951060 aaaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 32950961  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  32950960 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcat 32950861  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||| |||| |||||||  | ||||||||||||||    
T  32950860 gaaaacatgagatttcttaagatttttttttttcttttaagattttacta 32950811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 313 - 560
Target Start/End: Original strand, 1044791 - 1045035
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| || |||||||||  ||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  1044791 aaaaagtcttgtgttattcaatcaagattccttgtcattt--aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 1044888  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1044889 ttcaaaaccattcaactttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 1044988  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttac 560  Q
    |||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  1044989 gaaaacataagatttcttagaattgtttttttctt-ttaagattttac 1045035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 22201997 - 22202245
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  22201997 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 22202096  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||| ||||||| || ||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22202097 ttcaaaatcattaaaatttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 22202196  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||| ||||||||||| |||||||||||||| |||| |||||||||    
T  22202197 gaaaacattagatttcttagcattgtttttttctt-ttaaaattttacta 22202245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 313 - 561
Target Start/End: Complemental strand, 39479581 - 39479332
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnntt--ctagtgg 410  Q
    ||||||||||||| ||||||||||||| || ||||||||| |||||||||||| |||||||||||||||||||||||| |||           || ||||    
T  39479581 aaaaagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtgg 39479482  T
Q  411 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttc 510  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||    
T  39479481 tattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtctttc 39479382  T
Q  511 atgaaaacatgagatttcttaggattgtttttttcttcttaagattttact 561  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  39479381 atgaaagcatgagatttcttaggattgtttttttctt-ttaagattttact 39479332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 313 - 547
Target Start/End: Original strand, 1112875 - 1113109
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||| ||||  ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  1112875 aaaaagtattgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 1112974  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| |||||||| |||||||||    
T  1112975 ttcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcat 1113074  T
Q  513 gaaaacatgagatttcttaggattgtttttttctt 547  Q
    |||||||||||||||||||||||||||||||||||    
T  1113075 gaaaacatgagatttcttaggattgtttttttctt 1113109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 262 - 508
Target Start/End: Original strand, 25445983 - 25446227
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||| | |||||||||| |||||| |    
T  25445983 gggtgtattggat-atgattttaagggattttaaaagacttttttatcatgaaaaagtcttgtattattcaatcaagatt-tttgtcatttaaaaaaatt 25446080  T
Q  362 cttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttga 461  Q
    |||| |||||||||||||||||||||||| |||        ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25446081 cttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttga 25446180  T
Q  462 tagattttgtgggattttctagtgaaattttagcatgaaaatgtctt 508  Q
    | |||||||||||||||| |||||||||||||||||||||| |||||    
T  25446181 tggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 34228806 - 34228559
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||| ||| ||||||||||||| |||||||||||| ||||||||| || ||||||||||||| | |||||||| |||        ||||||||||    
T  34228806 aaaaagtct-gtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggta 34228708  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||    
T  34228707 ttcaaaatcattgaaatttcgaatgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcat 34228608  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  34228607 gaaaacatgagatttcttaagattgtttttttctt-ttaagattttacta 34228559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 37046676 - 37046425
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt-tctagtggt 411  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||| ||| |||||||||||||||||||||||| |||         ||||||| |    
T  37046676 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgat 37046577  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtg-aaattttagcatgaaaatgtctttc 510  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  37046576 atttaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttc 37046477  T
Q  511 atgaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||| ||||||||||||||||||||||||||  | ||||||||||||||    
T  37046476 atgaaaatatgagatttcttaggattgttttttttcttttaagattttacta 37046425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 30009901 - 30009653
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| |||| |||||| | ||||| |||||| ||||||||| || |||||||||||||||||||||||| |||        ||||||||||    
T  30009901 aaaaagtcttgtgttatttaatcaaaattctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 30009802  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||| ||||||  || |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  30009801 ttcaaaatcatttaaattttaaatgattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcat 30009702  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  30009701 gaaaacatgagatttcttaagattgtttttttctt-ttaagattttacta 30009653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 5441386 - 5441615
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  5441386 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 5441485  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  5441486 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 5441585  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  5441586 gaaaagatgagatttcttgagattgttttt 5441615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 27768038 - 27768267
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  27768038 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 27768137  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  27768138 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 27768237  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  27768238 gaaaagatgagatttcttgagattgttttt 27768267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 46635866 - 46635624
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||| ||||||  ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        | |||| |||    
T  46635866 aaaaaatcttgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagta 46635767  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||||||||||||||||||| |||||      |||||||||||||||| |||||||||||||||||||||| |||||||||    
T  46635766 ttcaaaatcattcaaatttcgaaggattgtttaataaataagatt------gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcat 46635673  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
     |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  46635672 aaaaacatgagatttcttaggattgtttttttctt-ttaaaattttacta 46635624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 54341126 - 54341355
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  54341126 aaaaagtcttatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 54341225  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  54341226 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 54341325  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  54341326 gaaaagatgagatttcttgagattgttttt 54341355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 313 - 561
Target Start/End: Complemental strand, 31314952 - 31314719
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| |||| |||||||| |||||||||||| |||||||||||| |||||||||    ||||||||||| |||        ||||||||||    
T  31314952 aaaaagtcttgtgttatttaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa----gactcttaatcacttaaaaaaagtctagtggta 31314857  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||| |||||||||    
T  31314856 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg----------tgggattttctagtgaaattttagcatgaaaaagtctttcat 31314767  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttact 561  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31314766 gaaaacatgagatttcttaggattgtttttttctt-ttaagattttact 31314719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 24131196 - 24130957
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||||||||    
T  24131196 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 24131097  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatg-aaaatgtctttca 511  Q
    ||||||          ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||  |||||||    
T  24131096 ttcaaa----------tttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttca 24131007  T
Q  512 tgaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24131006 tgaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 24130957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 321 - 562
Target Start/End: Original strand, 3436583 - 3436823
Alignment:
Q  321 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaat 420  Q
    ||||| ||||||||||||| | |||||| ||| |||||| ||||| | ||||||||||||||||||||||  ||        |||| |||||||||||||    
T  3436583 ttgtgttattcaatcaagattttttgtcgtttaaaaaaaatcttgtgatattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaat 3436682  T
Q  421 cattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacat 520  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||| |||||||| || ||||||||||||||    
T  3436683 cattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacat 3436782  T
Q  521 gagatttcttaggattgtttttttcttcttaagattttacta 562  Q
     ||||||||||| |||||||||||||| ||||||||||||||    
T  3436783 aagatttcttagaattgtttttttctt-ttaagattttacta 3436823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 254 - 542
Target Start/End: Original strand, 23987137 - 23987415
Alignment:
Q  254 actaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttt 353  Q
    |||||| ||| |||||||||| | |||| || |||||||| ||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||    
T  23987137 actaagggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaatactctttgtcatttt 23987236  T
Q  354 aaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatca 453  Q
    |||||||||||||||||||||||||| ||| || ||| |||        ||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  23987237 aaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaatta 23987336  T
Q  454 gattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    |||||||||          ||||||| ||||| ||||||| || ||||| |||||||||||||| ||||||||||||  ||||||||||    
T  23987337 gattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 23987415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 313 - 507
Target Start/End: Original strand, 28541680 - 28541874
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||| | |||||||||||||||||||||||| |||        ||||||||||    
T  28541680 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 28541779  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtct 507  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||    
T  28541780 ttcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 51320903 - 51321132
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  51320903 aaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 51321002  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||  ||||| ||||| ||||||| || ||||| || ||||||    
T  51321003 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcat 51321102  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  51321103 gaaaagatgagatttcttgagattgttttt 51321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 355 - 562
Target Start/End: Original strand, 42786708 - 42786913
Alignment:
Q  355 aaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 454  Q
    ||||||||||| ||||||||||||||||||||||||  ||        |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  42786708 aaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcat 42786807  T
Q  455 attttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgtttttttcttcttaaga 554  Q
    |||||||| |||||||||| ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  42786808 attttgatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattg-ttttttctt-ttaaga 42786905  T
Q  555 ttttacta 562  Q
    ||||||||    
T  42786906 ttttacta 42786913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 37828626 - 37828397
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | || |||  ||        ||| ||||||    
T  37828626 aaaaaatcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggta 37828527  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| |||||||  | ||||| |||||||||    
T  37828526 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcat 37828427  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  37828426 gaaaagatgagatttcttgagattgttttt 37828397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 54853692 - 54853463
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| || ||| |||        ||| ||||||    
T  54853692 aaaaagtcttgtggtattcaatcaagactctttttcattttaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 54853593  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||| ||||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||  ||||||||    
T  54853592 ttcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcat 54853493  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  54853492 gaaaagatgagatttcttgagattgttttt 54853463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 313 - 544
Target Start/End: Original strand, 9163058 - 9163281
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| | || ||| | |        ||| ||| ||    
T  9163058 aaaaagtcttgtggtattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgata 9163157  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||        ||||    
T  9163158 ttcaaaatcattcaaatttcgaaggattgtttaataaattaaattttgatggattttgtggaattttctagtgaaattttagcatgaa--------tcat 9163249  T
Q  513 gaaaacatgagatttcttaggattgttttttt 544  Q
    ||||||||||||||||||| ||||||||||||    
T  9163250 gaaaacatgagatttcttatgattgttttttt 9163281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 403 - 560
Target Start/End: Original strand, 41320882 - 41321038
Alignment:
Q  403 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaa 502  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||    
T  41320882 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaattttagtatgaaaa 41320981  T
Q  503 tgtctttcatgaaaacatgagatttcttaggattgtttttttcttcttaagattttac 560  Q
     ||||||||| |||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  41320982 agtctttcataaaaacatgagatttcttaagattgattttttctt-ttaagattttac 41321038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 32322073 - 32322302
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| | || ||| |||        ||| ||||||    
T  32322073 aaaaagtcatgtgatatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggta 32322172  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||| |||||||||||||||| ||||| |||||||  | |||||||||||||||    
T  32322173 ttcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcat 32322272  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
     |||| ||||||||||||  ||||||||||    
T  32322273 aaaaagatgagatttcttgagattgttttt 32322302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 37915809 - 37916038
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  37915809 aaaaagtcttgtggtattcaatcaagactctctatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 37915908  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| | ||||| || ||||| ||| |||||    
T  37915909 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtcattcat 37916008  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| || |||||| ||  ||||||||||    
T  37916009 gaaaagataagatttattgagattgttttt 37916038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 313 - 516
Target Start/End: Complemental strand, 19741132 - 19740929
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||||||| || |||||||| |||||||| |||||| |||        ||| ||||||    
T  19741132 aaaaagtcttgtgttattcaatcaagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggta 19741033  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    || |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  19741032 ttaaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcat 19740933  T
Q  513 gaaa 516  Q
    ||||    
T  19740932 gaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 40537369 - 40537136
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||| |||            ||||||    
T  40537369 aaaaagtcttgtgttattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaat-----gtggta 40537275  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||| |||||||||| |||||||||||||||| ||||||||| ||||||||||          ||||||||||||||||||| |||||||||    
T  40537274 ttcaaaatcatttaaatttcgaatgattgtttaataaatctgattttgatggattttgtgg----------tgaaattttagcatgaaaaagtctttcat 40537185  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||    
T  40537184 gaaaacatgagatttcttaggatt-tttttttttttttaagattttacta 40537136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 296 - 528
Target Start/End: Complemental strand, 44771095 - 44770862
Alignment:
Q  296 aagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggta-ttcaatcaagactcttaatcgctt 394  Q
    |||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| | || ||| |||    
T  44771095 aagactttttgattatgaaaaagtcttgtgatattcaatcaagactctttgtcattttaaaaaaatcttgaggtaattcaatcaagatttttcatcactt 44770996  T
Q  395 nnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttag 494  Q
            |||  |||||||||||||||||||||||| |||||||||||||||||||  ||||||| | ||||||||||||||||||||||||||||||     
T  44770995 aaaaaaaatctcatggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaa 44770896  T
Q  495 catgaaaatgtctttcatgaaaacatgagatttc 528  Q
     | ||||| |||||||||||  ||||||||||||    
T  44770895 gaagaaaaagtctttcatgacgacatgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 53275821 - 53276069
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||| ||||||| |||||||| |||| | |||||||||| ||||||||||||  |||||||||||||| | |||||| |||        ||||||| ||    
T  53275821 aaaaaatcttgtgttattcaataaagattatttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgata 53275920  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca- 511  Q
    || ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| | ||||||||||||||||| ||||||||     
T  53275921 tttaaaatcattcaaatttcgaaggattgtgtaataaatcagattttgatggattttgtgagattttctaataaaattttagcatgaaaaagtctttcat 53276020  T
Q  512 tgaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    | ||||| | |||||| ||||||||| ||||||||| ||||||||||||||    
T  53276021 taaaaactttagattttttaggattg-ttttttctt-ttaagattttacta 53276069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 266 - 493
Target Start/End: Original strand, 28370859 - 28371086
Alignment:
Q  266 gtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttg 365  Q
    ||||||||| | |||||||| | ||||| || |||||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  28370859 gtattggattaggattctaatgaattttaaaggactttttaattatgaaaaagtcttgtggtattcaatcaaaactctttgtcgttttaaaaaagtcttg 28370958  T
Q  366 aggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgataga 465  Q
    || ||||||||||| ||| || ||| |||        |||  ||||||||||||||||||||||||  ||||||||||||||||||   |||||| |  |    
T  28370959 agatattcaatcaaaactttttatcacttaaataaagtctcatggtattcaaaatcattcaaattttaaaggattgtttaataaattgaattttggtgaa 28371058  T
Q  466 ttttgtgggattttctagtgaaatttta 493  Q
    ||||||||||||||||||||||||||||    
T  28371059 ttttgtgggattttctagtgaaatttta 28371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 313 - 493
Target Start/End: Original strand, 23464937 - 23465117
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||  ||||||||||||| || ||||||||| |||||||| |||   |||||||||||||||||||||| |||        ||||||||||    
T  23464937 aaaaagtcttgtattattcaatcaagattccttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctagtggta 23465036  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaatttta 493  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  23465037 ttcaaaaccattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtgggattttctagttaaatttta 23465117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 313 - 544
Target Start/End: Complemental strand, 30967523 - 30967302
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | || ||| |||        ||| ||||||    
T  30967523 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggta 30967424  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||| ||||||||||||||||||          | |||||||||||||||| ||||| ||||||| || |||||  ||||||||    
T  30967423 ttcaaaatcattcaaatttcaaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcat 30967334  T
Q  513 gaaaacatgagatttcttaggattgttttttt 544  Q
    ||||| || |||||||||  ||||||||||||    
T  30967333 gaaaaaataagatttcttgagattgttttttt 30967302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 313 - 507
Target Start/End: Complemental strand, 7249996 - 7249795
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt-------tct 405  Q
    ||||||||||||| ||||||||||||| |||| ||||||| |||||  ||||| ||||||| |||||||||||| ||  |||               |||    
T  7249996 aaaaagtcttgtgttattcaatcaagattcttagtcatttaaaaaatatcttgtggtattcgatcaagactcttgataacttaaaaaaaaaaaaaagtct 7249897  T
Q  406 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgt 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  7249896 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 7249797  T
Q  506 ct 507  Q
    ||    
T  7249796 ct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 288 - 543
Target Start/End: Complemental strand, 39307502 - 39307247
Alignment:
Q  288 gattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctta 387  Q
    |||||| |||||| ||| ||| || ||||||| ||||||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||| ||||     
T  39307502 gattttaaaagacatttatattatcaaaaagttttgtggtattcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttc 39307403  T
Q  388 atcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaa 487  Q
    |||  ||        ||| |||||||||| ||||||||||||||| || |||| |||||| |||    |||||||  |||||||||||||||||||||||    
T  39307402 atcatttaaaaaaagtcttgtggtattcataatcattcaaatttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaa 39307303  T
Q  488 attttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgtttttt 543  Q
    |||||| |||||||| || | | || ||||||||||||||||||| ||||||||||    
T  39307302 attttaacatgaaaaagtttctgataaaaacatgagatttcttagaattgtttttt 39307247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 313 - 480
Target Start/End: Complemental strand, 25504863 - 25504696
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| ||||  |||||| |||||| ||||| | |||||||||||||||||||||| |||        || |||| ||    
T  25504863 aaaaagtcttgtgttattcaatcaagattcttgatcatttaaaaaaattcttgtgatattcaatcaagactcttaatcacttaaaaaaagtccagtgata 25504764  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttc 480  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25504763 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttc 25504696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 405 - 547
Target Start/End: Complemental strand, 27454210 - 27454068
Alignment:
Q  405 tagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatg 504  Q
    ||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||  ||||||||| |||||||||||||||||| ||||||||| |    
T  27454210 tagtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaag 27454111  T
Q  505 tctttcatgaaaacatgagatttcttaggattgtttttttctt 547  Q
    |||||||||||||||| | |||| ||| |||||||||||||||    
T  27454110 tctttcatgaaaacataatatttgttaagattgtttttttctt 27454068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 301 - 530
Target Start/End: Complemental strand, 36479467 - 36479249
Alignment:
Q  301 ttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnn 400  Q
    ||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| | || ||| |||          
T  36479467 tttttaattatgaaaaagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaa 36479368  T
Q  401 nttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaa 500  Q
      ||| |||||||||||||| ||||||||||||||||||| ||||||||||  ||||||||| ||||||           ||||||||||||||||  ||    
T  36479367 agtctcgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttgatggatttt-----------tagtgaaattttagcaaaaa 36479279  T
Q  501 aatgtctttcatgaaaacatgagatttctt 530  Q
    || |||||| ||||||||||||||||||||    
T  36479278 aaagtcttttatgaaaacatgagatttctt 36479249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 262 - 386
Target Start/End: Complemental strand, 24131289 - 24131165
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||    
T  24131289 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 24131190  T
Q  362 cttgaggtattcaatcaagactctt 386  Q
    |||| | ||||||||||||| ||||    
T  24131189 cttgtgttattcaatcaagattctt 24131165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 313 - 460
Target Start/End: Complemental strand, 49835037 - 49834890
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| || ||| |||        ||| ||||||    
T  49835037 aaaaagtcttgtggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 49834938  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 460  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  49834937 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 49834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 313 - 530
Target Start/End: Original strand, 12913206 - 12913413
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||  | || |||  ||        |||  |||||    
T  12913206 aaaaagtcttgtggtatttaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagctttttcatcatttaaaaaaagtctcatggta 12913305  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||| |||||||||||||||||||          | |||||||||||||||||||||||||||||| || ||||| || ||||||    
T  12913306 ttcaaaatcattcaaattttgaaggattgtttaataaat----------tggattttgtgggattttctagtgaaattttaacaagaaaaagtatttcat 12913395  T
Q  513 gaaaacatgagatttctt 530  Q
    ||| ||||||||||||||    
T  12913396 gaagacatgagatttctt 12913413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 22201903 - 22202028
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||   |||| |||||||    
T  22201903 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaag 22202002  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  22202003 tcttgtgttattcaatcaagattctt 22202028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 261 - 381
Target Start/End: Original strand, 1044698 - 1044817
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  1044698 ggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt-ccaatttaaaaaag 1044796  T
Q  361 tcttgaggtattcaatcaaga 381  Q
    ||||| | |||||||||||||    
T  1044797 tcttgtgttattcaatcaaga 1044817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 313 - 473
Target Start/End: Complemental strand, 29649891 - 29649731
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||  || || ||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  29649891 aaaaagtcttgtggtattagattaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 29649792  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgg 473  Q
    ||||||||||||||||||||||| |||||||||||||||  ||||||||| ||||||||||    
T  29649791 ttcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 256 - 386
Target Start/End: Complemental strand, 41881407 - 41881276
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttta 354  Q
    |||| ||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||||    
T  41881407 taaggggggtgtattggatcatgattttaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttta 41881308  T
Q  355 aaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||||||||| | ||||||||||||| ||||    
T  41881307 aaaaagtcttgtgttattcaatcaagattctt 41881276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 289 - 460
Target Start/End: Complemental strand, 32684235 - 32684065
Alignment:
Q  289 attttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaa 388  Q
    ||||| || |||||||| || ||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||| || |    
T  32684235 attttaaaggactttttaattatgaaaaagtcttgtggtattcaattaagattctttgtcattttaaaaaagtattgaggtattcaatcaagacttttca 32684136  T
Q  389 tcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 460  Q
    ||  ||        ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  32684135 tc-atttaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 32684065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 321 - 530
Target Start/End: Original strand, 41725115 - 41725321
Alignment:
Q  321 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaat 420  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||| || ||| | |        ||| ||| ||||||||||    
T  41725115 ttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgatgtatgcaatcaagacttttcatcacctaaaaaaagtcttgtgatattcaaaat 41725214  T
Q  421 cattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacat 520  Q
    ||||||||||| ||||||||||||||   ||  |||||||||  ||||||||||||||| ||||| ||||||| || |||||  ||||||||||||| ||    
T  41725215 cattcaaattttgaaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaaaaatctttcatgaaaagat 41725311  T
Q  521 gagatttctt 530  Q
    ||||||||||    
T  41725312 gagatttctt 41725321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 25331019 - 25331144
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    |||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||| |||||||    
T  25331019 ggggtgtattggatcatgattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 25331118  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  25331119 tcttgtgttattcaatcaagattctt 25331144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 261 - 386
Target Start/End: Complemental strand, 40537463 - 40537338
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||||||||||||||||||| |||||||||| | |||| |||||||    
T  40537463 ggggtgtattggatcatgattgtaagggattttaaaagacttttgtatcataaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaaag 40537364  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||||||||    
T  40537363 tcttgtgttattcaatcaagactctt 40537338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 262 - 386
Target Start/End: Original strand, 28541587 - 28541711
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||   |||| ||||||||    
T  28541587 gggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagt 28541686  T
Q  362 cttgaggtattcaatcaagactctt 386  Q
    |||| | ||||||||||||| ||||    
T  28541687 cttgtgttattcaatcaagattctt 28541711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 42786655 - 42786770
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagactttt-ttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 359  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||| ||||||    
T  42786655 ggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaa 42786754  T
Q  360 gtcttgaggtattcaa 375  Q
    |||| | |||||||||    
T  42786755 gtctagtggtattcaa 42786770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 407 - 542
Target Start/End: Original strand, 48261203 - 48261338
Alignment:
Q  407 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtc 506  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || |||||  ||    
T  48261203 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatc 48261302  T
Q  507 tttcatgaaaacatgagatttcttaggattgttttt 542  Q
    ||||||||||| ||||||||||||  ||||||||||    
T  48261303 tttcatgaaaatatgagatttcttgagattgttttt 48261338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 261 - 383
Target Start/End: Original strand, 37915673 - 37915795
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    |||||||||||||| ||||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||| | || |||||||    
T  37915673 ggggtgtattggattatgattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgtaacttaaaaaaag 37915772  T
Q  361 tcttgaggtattcaatcaagact 383  Q
    ||||| |||||||||||||||||    
T  37915773 tcttgtggtattcaatcaagact 37915795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 262 - 387
Target Start/End: Complemental strand, 7250090 - 7249964
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttt--aaaaaa 359  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||  ||||||    
T  7250090 gggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactcttt-tcaatttaaaaaaaa 7249992  T
Q  360 gtcttgaggtattcaatcaagactctta 387  Q
    |||||| | ||||||||||||| |||||    
T  7249991 gtcttgtgttattcaatcaagattctta 7249964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 271 - 381
Target Start/End: Complemental strand, 32951144 - 32951034
Alignment:
Q  271 ggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggta 370  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||   |||| |||||||||||| | ||    
T  32951144 ggatcatgattctaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgtta 32951045  T
Q  371 ttcaatcaaga 381  Q
    |||||||||||    
T  32951044 ttcaatcaaga 32951034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 5441296 - 5441417
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||| |||||||||||    
T  5441296 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 5441395  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  5441396 gtggtattcaatcaagactctt 5441417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 262 - 386
Target Start/End: Complemental strand, 37046769 - 37046645
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    |||||||||||||||||||||||||| ||||| |||||  |||||||||| |||||||||||||||||||||||||||||||||   |||| ||||||||    
T  37046769 gggtgtattggatcatgattctaaggaattttaaaagatatttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagt 37046670  T
Q  362 cttgaggtattcaatcaagactctt 386  Q
    |||| | ||||||||||||| ||||    
T  37046669 cttgtgttattcaatcaagattctt 37046645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 261 - 381
Target Start/End: Complemental strand, 39479675 - 39479555
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||| ||||  ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||   |||| |||||||    
T  39479675 ggggtgtattggatcatgattttaagaaattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaag 39479576  T
Q  361 tcttgaggtattcaatcaaga 381  Q
    ||||| | |||||||||||||    
T  39479575 tcttgtgttattcaatcaaga 39479555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 49501735 - 49501514
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||||  ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||| |||        ||| |||| |    
T  49501735 aaaaagtcttgcagtattcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggca 49501636  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttc-- 510  Q
    ||||||||||||||||||||||| |||||||||||||||          | |||||||||| ||||| ||||| ||||||| || ||||| |||||||      
T  49501635 ttcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcat 49501546  T
Q  511 atgaaaacatgagatttcttaggattgttttt 542  Q
    || |||| ||||||||||||  ||||||||||    
T  49501545 ataaaaagatgagatttcttgagattgttttt 49501514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 49507800 - 49507579
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||||  ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||| |||        ||| |||| |    
T  49507800 aaaaagtcttgcagtattcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggca 49507701  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttc-- 510  Q
    ||||||||||||||||||||||| |||||||||||||||          | |||||||||| ||||| ||||| ||||||| || ||||| |||||||      
T  49507700 ttcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcat 49507611  T
Q  511 atgaaaacatgagatttcttaggattgttttt 542  Q
    || |||| ||||||||||||  ||||||||||    
T  49507610 ataaaaagatgagatttcttgagattgttttt 49507579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 264 - 386
Target Start/End: Complemental strand, 31315043 - 31314921
Alignment:
Q  264 gtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtct 363  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||| |||   |||| ||||||||||    
T  31315043 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaaaaaagtct 31314944  T
Q  364 tgaggtattcaatcaagactctt 386  Q
    || | |||| |||||||| ||||    
T  31314943 tgtgttatttaatcaagattctt 31314921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 27767948 - 27768069
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||| | ||||  |||| |||||||||||    
T  27767948 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttttgcaatttaaaaaaagtctt 27768047  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  27768048 gtggtattcaatcaagactctt 27768069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 30967613 - 30967492
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| |||||| || |||||||| ||||| ||||| || |||||||||||||||||||||||||||||||| ||||  |||| |||||||||||    
T  30967613 tgtattggattatgattttatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 30967514  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  30967513 gtggtattcaatcaagactctt 30967492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 313 - 451
Target Start/End: Original strand, 50018233 - 50018371
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  ||  ||        ||| ||||||    
T  50018233 aaaaagtcttatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattccatcaagacttttcttcatttaaaaaaagtcttgtggta 50018332  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaat 451  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  50018333 ttcaagatcattcaaattttgaaggattgtttaataaat 50018371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 54341036 - 54341157
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||| |||||||||||    
T  54341036 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 54341135  T
Q  365 gaggtattcaatcaagactctt 386  Q
      ||||||||||||||||||||    
T  54341136 atggtattcaatcaagactctt 54341157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 262 - 386
Target Start/End: Complemental strand, 25504955 - 25504832
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    ||||||||||||||| | |||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||    
T  25504955 gggtgtattggatcagg-ttctaatggattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 25504857  T
Q  362 cttgaggtattcaatcaagactctt 386  Q
    |||| | ||||||||||||| ||||    
T  25504856 cttgtgttattcaatcaagattctt 25504832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 263 - 386
Target Start/End: Complemental strand, 46635959 - 46635835
Alignment:
Q  263 ggtgtattggatcatgattctaagggattttcaaagacttttttatcatga-aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||   |||| |||||| |    
T  46635959 ggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaat 46635860  T
Q  362 cttgaggtattcaatcaagactctt 386  Q
    ||||   ||||||||||||| ||||    
T  46635859 cttgtattattcaatcaagattctt 46635835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 256 - 386
Target Start/End: Original strand, 20021227 - 20021357
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||| |||||||||| || ||| ||||||||||| ||||||||||| || ||||||||||||||||||||| |||||||||||||||  |||| ||    
T  20021227 taagggggatgtattggattataattttaagggattttaaaagactttttaattatgaaaaagtcttgtggtatttaatcaagactctttgcaatttaaa 20021326  T
Q  356 aaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||| ||| ||||||||||||||| ||||    
T  20021327 aaaagttttgtggtattcaatcaagattctt 20021357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 261 - 379
Target Start/End: Complemental strand, 30009995 - 30009877
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||| | ||||||||||||||||||||   |||| |||||||    
T  30009995 ggggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttattgtattcaatcaagactctttccaatttaaaaaaag 30009896  T
Q  361 tcttgaggtattcaatcaa 379  Q
    ||||| | |||| ||||||    
T  30009895 tcttgtgttatttaatcaa 30009877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 266 - 386
Target Start/End: Complemental strand, 49835126 - 49835006
Alignment:
Q  266 gtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttg 365  Q
    ||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||| ||| ||||  | || ||||||||||||    
T  49835126 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttg 49835027  T
Q  366 aggtattcaatcaagactctt 386  Q
     ||||||||||||||||||||    
T  49835026 tggtattcaatcaagactctt 49835006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 281 - 386
Target Start/End: Complemental strand, 34228880 - 34228776
Alignment:
Q  281 tctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaag 380  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||| || | ||||||||||||    
T  34228880 tctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtc-tgtgttattcaatcaag 34228782  T
Q  381 actctt 386  Q
    | ||||    
T  34228781 attctt 34228776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 262 - 386
Target Start/End: Original strand, 55302732 - 55302856
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    |||||||||| ||||||||| |||||||||||  ||||||||||||| |||||||||| || ||||||||||||||||||||||   |||| ||||||||    
T  55302732 gggtgtattgaatcatgattttaagggattttagaagacttttttataatgaaaaagtgttatggtattcaatcaagactcttttcaatttaaaaaaagt 55302831  T
Q  362 cttgaggtattcaatcaagactctt 386  Q
    |||| | | ||||||||||| ||||    
T  55302832 cttgtgtttttcaatcaagattctt 55302856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 443 - 542
Target Start/End: Original strand, 8711978 - 8712077
Alignment:
Q  443 ttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    |||||||||  ||||||||| |||||||||||||||| |||||||||||||||| ||||| ||||||||| |||||||||||||||||  ||||||||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattgttttt 8712077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 255 - 386
Target Start/End: Complemental strand, 19741231 - 19741101
Alignment:
Q  255 ctaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttta 354  Q
    ||||| ||| ||||||  |||||||||||||  |||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||   |||| |    
T  19741231 ctaagggggatgtattcaatcatgattctaaaagattttaaaagacttttt-atcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaa 19741133  T
Q  355 aaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||||||||| | ||||||||||||| ||||    
T  19741132 aaaaagtcttgtgttattcaatcaagattctt 19741101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 408 - 542
Target Start/End: Complemental strand, 56445474 - 56445350
Alignment:
Q  408 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtct 507  Q
    |||||||||||||||||||||||||||| |||||||||||||||          | ||||||||||||||||||||||||| ||||||| ||||| ||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtgggattttctagtgaaactttagcaagaaaaagtct 56445385  T
Q  508 ttcatgaaaacatgagatttcttaggattgttttt 542  Q
    ||||| || ||||||||||||||  ||||||||||    
T  56445384 ttcataaagacatgagatttcttgagattgttttt 56445350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 262 - 381
Target Start/End: Original strand, 7007262 - 7007382
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttt--aaaaaa 359  Q
    ||||| |||| ||||||||| ||||||||||| | |||||||||||| |||||||||| ||||||||||||||||||||||||| ||| |||  ||||||    
T  7007262 gggtggattgaatcatgattttaagggattttaatagacttttttataatgaaaaagttttgtggtattcaatcaagactcttt-tcaatttaaaaaaaa 7007360  T
Q  360 gtcttgaggtattcaatcaaga 381  Q
    |||||| | |||||||||||||    
T  7007361 gtcttgtgttattcaatcaaga 7007382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 263 - 386
Target Start/End: Original strand, 1112784 - 1112906
Alignment:
Q  263 ggtgtattggatcatgattctaagggattttcaaagactttt-ttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||   |||| ||||||||    
T  1112784 ggtgtattggatcatgattctaag--attttaaaagactttttttatcatgaaaaagtcttgtgttattcaatcaagactctttccgatttaaaaaaagt 1112881  T
Q  362 cttgaggtattcaatcaagactctt 386  Q
     |||   ||||||||||||| ||||    
T  1112882 attgtattattcaatcaagattctt 1112906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 54853782 - 54853661
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | |||| || || ||||| ||||||||||| || | |||||||||||||||||||||||||||||| ||||  | || |||||||||||    
T  54853782 tgtattggattaggattttatggaattttaaaagactttttaattacgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 54853683  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  54853682 gtggtattcaatcaagactctt 54853661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 265 - 381
Target Start/End: Original strand, 23464845 - 23464963
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagactttt--ttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtc 362  Q
    |||||||||| |||||||||||| ||||| ||||| ||||  |||||||||||||||||||||||||||||||||||||||||   || | |||||||||    
T  23464845 tgtattggattatgattctaaggaattttaaaagatttttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatataaaaaaagtc 23464944  T
Q  363 ttgaggtattcaatcaaga 381  Q
    |||   |||||||||||||    
T  23464945 ttgtattattcaatcaaga 23464963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 443 - 542
Target Start/End: Original strand, 24736447 - 24736546
Alignment:
Q  443 ttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    |||||||||  ||||||||| ||||||||| |||||||||||||||||||| || ||| | |||||||||||||||||||||||||||  ||||||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattgttttt 24736546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 313 - 471
Target Start/End: Original strand, 5799959 - 5800118
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt-tctagtggt 411  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||   |||| |||||  ||||| ||| || ||| |||         ||| |||||    
T  5799959 aaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaaaatttgatgtatttcatcaaaacttttcatcacttaaaaaaaagtcttgtggt 5800058  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgt 471  Q
    ||||||||||||||||||||| ||||||||||||||||||  |||||||  |||||||||    
T  5800059 attcaaaatcattcaaatttcaaaggattgtttaataaattggattttgtgagattttgt 5800118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 464 - 542
Target Start/End: Original strand, 11090437 - 11090515
Alignment:
Q  464 gattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    |||||||||||||||| ||||||||||||||||| |||| |||||| || |||||||||||||||||||||||||||||    
T  11090437 gattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattgttttt 11090515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 288 - 386
Target Start/End: Complemental strand, 37828693 - 37828595
Alignment:
Q  288 gattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  | || |||||| ||||| ||||||||||||||||||||    
T  37828693 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaaattaaaaaaaatcttgtggtattcaatcaagactctt 37828595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 41320638 - 41320761
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    |||||||||||||||||||||||||  |||||| ||||| |||||||| |||||||||||  ||||||||||||||||||| |||   |||| ||||| |    
T  41320638 ggggtgtattggatcatgattctaaaagattttaaaagatttttttattatgaaaaagtc--gtggtattcaatcaagactgtttccaatttaaaaaatg 41320735  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  41320736 tcttgtgttattcaatcaagattctt 41320761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 51320813 - 51320934
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| || ||||| ||||||||||| || |||||||| | ||||||||||||||||||||| ||||  | || |||||||| ||    
T  51320813 tgtattggattaggattctacggaattttaaaagactttttaattatgaaaaaattttgtggtattcaatcaagactttttgcaacttaaaaaaagtttt 51320912  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  51320913 gtggtattcaatcaagactctt 51320934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 313 - 385
Target Start/End: Original strand, 37915767 - 37915839
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactct 385  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||||||| |||||||||||||||||||    
T  37915767 aaaaagtcttgtggtattcaatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaagactct 37915839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 355 - 542
Target Start/End: Original strand, 28483923 - 28484099
Alignment:
Q  355 aaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 454  Q
    ||||||||||||||||||||||||||||| || ||| |||        ||| |||||||||||||||||||||||||||||||||| ||||||||||       
T  28483923 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaat--- 28484019  T
Q  455 attttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
           | |||||||| ||||||| ||||| || |||| || ||||| |||||||||||||| | ||||||||||| |||| |||||    
T  28484020 -------tggattttgtaggattttgtagtgtaa-tttaacaagaaaaagtctttcatgaaaagacgagatttcttaagattattttt 28484099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 265 - 372
Target Start/End: Complemental strand, 29649981 - 29649874
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| | |||||| ||||||||||| || |||||||||| ||||||||||||||||||||| ||||  |||| |||||||||||    
T  29649981 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 29649882  T
Q  365 gaggtatt 372  Q
    | ||||||    
T  29649881 gtggtatt 29649874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 313 - 531
Target Start/End: Complemental strand, 41582012 - 41581795
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||| |||| ||| ||| |||||||  ||||||||||||||||||||||| |||||||| | |||| | ||  |  |||        ||| ||||||    
T  41582012 aaaaagttttgtagtactcagtcaagacattttgtcattttaaaaaagtcttgtggtattcagttaagaattttcttaacttaaaaaaagtctcgtggta 41581913  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatg-aaaatgtctttca 511  Q
    || | | |||||||||||| |||  ||||||||||||||  ||||  |||| ||||||||||||||||||||||||||||| |||| ||||  | |||||    
T  41581912 tttagagtcattcaaattttgaataattgtttaataaattggatt--gatatattttgtgggattttctagtgaaattttaacatgaaaaaaatatttca 41581815  T
Q  512 tgaaaacatgagatttctta 531  Q
    || |||||||||||||||||    
T  41581814 tgtaaacatgagatttctta 41581795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 262 - 381
Target Start/End: Original strand, 49469210 - 49469329
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    ||||||||||||||||||||| |||| ||||| |||||||||||| |  |||| ||||||||||||||| ||||||||||||||   |||| | ||||||    
T  49469210 gggtgtattggatcatgattccaaggaattttaaaagactttttttttgtgaagaagtcttgtggtatttaatcaagactctttccaatttaagaaaagt 49469309  T
Q  362 cttgaggtattcaatcaaga 381  Q
    |||| | |||||||| ||||    
T  49469310 cttgtgttattcaattaaga 49469329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 313 - 383
Target Start/End: Original strand, 20021326 - 20021396
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 383  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  20021326 aaaaagttttgtggtattcaatcaagattctttgtcattttaaaaaaatcttgaagtattcaatcaagact 20021396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 50018143 - 50018264
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| |  |||||| |||||||| ||| | ||||| || || ||||||||||||||||||||||||||||| |||   |||| |||||||||||    
T  50018143 tgtattggattagaattctatgggattttaaaatattttttaattataaaaaagtcttgtggtattcaatcaagactttttacaatttaaaaaaagtctt 50018242  T
Q  365 gaggtattcaatcaagactctt 386  Q
      ||||||||||||||||||||    
T  50018243 atggtattcaatcaagactctt 50018264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 278 - 394
Target Start/End: Original strand, 11090296 - 11090412
Alignment:
Q  278 gattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatc 377  Q
    ||||| |||||||||| ||| | ||||| || |||| || |||||||||||||||||||||| |||||| || || |||||||| ||| |||||||||||    
T  11090296 gattccaagggattttaaaatattttttaattatgagaatgtcttgtggtattcaatcaagaatctttgccacttaaaaaaagttttgtggtattcaatc 11090395  T
Q  378 aagactcttaatcgctt 394  Q
    |||||| || |||||||    
T  11090396 aagacttttcatcgctt 11090412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 67 - 175
Target Start/End: Original strand, 20436825 - 20436933
Alignment:
Q  67 ccatactttgaagtttgtggaagcatcgtaatctcaaactcatgcaaaatgaaaatgagttttgtgtttacgttgttgatcgagcatgacacctcgtgaa 166  Q
    |||||| ||| || |||||||||||||||||| | ||| ||  |||||||||||||||| |||||||| ||||||||||| ||||| |||||||| ||||    
T  20436825 ccatacattggagcttgtggaagcatcgtaattttaaattctagcaaaatgaaaatgagctttgtgttcacgttgttgattgagcacgacacctcatgaa 20436924  T
Q  167 gggttgggt 175  Q
    || ||||||    
T  20436925 ggattgggt 20436933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 49501827 - 49501704
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatc-aagactctttgtcattt-taaaaaagtc 362  Q
    |||||| ||| | ||||||| |||||||| ||||| ||||| || ||||||||||||||||||||| |||| |||||| ||||| ||||  |||||||||    
T  49501827 tgtatttgattaggattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattgaatctaagactttttgtaatttaaaaaaaagtc 49501728  T
Q  363 ttgaggtattcaatcaagactctt 386  Q
    |||  |||||||||||||||||||    
T  49501727 ttgcagtattcaatcaagactctt 49501704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 49507892 - 49507769
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatc-aagactctttgtcattt-taaaaaagtc 362  Q
    |||||| ||| | ||||||| |||||||| ||||| ||||| || ||||||||||||||||||||| |||| |||||| ||||| ||||  |||||||||    
T  49507892 tgtatttgattaggattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattgaatctaagactttttgtaatttaaaaaaaagtc 49507793  T
Q  363 ttgaggtattcaatcaagactctt 386  Q
    |||  |||||||||||||||||||    
T  49507792 ttgcagtattcaatcaagactctt 49507769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 281 - 386
Target Start/End: Original strand, 12913131 - 12913237
Alignment:
Q  281 tctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattt-taaaaaagtcttgaggtattcaatcaa 379  Q
    |||||| |||||| ||||| ||||| ||  ||||||||||||||||||||||||||||||||||| | ||||  |||||||||||| |||||| ||| ||    
T  12913131 tctaagagattttaaaagattttttaattttgaaaaagtcttgtggtattcaatcaagactctttataatttaaaaaaaagtcttgtggtatttaattaa 12913230  T
Q  380 gactctt 386  Q
    |||||||    
T  12913231 gactctt 12913237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 38230763 - 38230892
Alignment:
Q  253 aactaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattt 352  Q
    ||||||| ||||||||||| ||   ||||  |||||||||| |||||||||||||  |||||||||||| ||||||||||||||||||| ||    | ||    
T  38230763 aactaaggggggtgtattgaattgggatttcaagggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagacttttataaaatt 38230862  T
Q  353 taaaaaagtcttgaggtattcaatcaagac 382  Q
    |||| || ||||| ||||||||||||||||    
T  38230863 taaacaaatcttgtggtattcaatcaagac 38230892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 265 - 372
Target Start/End: Original strand, 467775 - 467882
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| |||||||| ||| ||||| ||||| ||||| || |||||||||| |||| ||||||||| |||| | ||||  |||| |||||||||||    
T  467775 tgtattggattatgattcttaggaattttaaaagattttttaattatgaaaaagttttgtcgtattcaattaagattatttgcaatttaaaaaaagtctt 467874  T
Q  365 gaggtatt 372  Q
    ||||||||    
T  467875 gaggtatt 467882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 265 - 375
Target Start/End: Original strand, 28483875 - 28483985
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    ||||||| || | ||||||| | |||||| ||||||||||| || |||||||||||||| ||||||||||||||||| ||  ||| || ||||||||||     
T  28483875 tgtattgaattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctc 28483974  T
Q  365 gaggtattcaa 375  Q
    | |||||||||    
T  28483975 gtggtattcaa 28483985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 32321983 - 32322104
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | |||||||   || ||| ||||||||||| || |||||||||| ||||||||||||||||||| | ||||| | || ||||||||| |    
T  32321983 tgtattggattaggattctatcagaatttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagattttttgtaacttaaaaaaagtcat 32322082  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | | |||| |||||||||||||    
T  32322083 gtgatatttaatcaagactctt 32322104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 264 - 345
Target Start/End: Original strand, 53275727 - 53275808
Alignment:
Q  264 gtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 345  Q
    |||||||||||||||||||||||| ||||| ||| |  |||||||||||||||| |||||  | ||||||||||||||||||    
T  53275727 gtgtattggatcatgattctaaggaattttaaaaaatatttttatcatgaaaaaatcttgcaggattcaatcaagactcttt 53275808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 268 - 365
Target Start/End: Complemental strand, 36728123 - 36728026
Alignment:
Q  268 attggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttg 365  Q
    ||||||| || |||||||  |||||| ||||| ||||| || ||||||||||||||| |||||||||||||| | ||| | ||||||||||| |||||    
T  36728123 attggattataattctaacagattttaaaagattttttaattatgaaaaagtcttgtagtattcaatcaagattttttataattttaaaaaaatcttg 36728026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 256 - 341
Target Start/End: Original strand, 44646715 - 44646800
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||| ||||||||||| |||| ||||  ||| |||||| ||||||||||| || || ||||| |||||||||||||||||||||||    
T  44646715 taaggggggtgtattgaatcaagatttcaagagattttaaaagactttttaatgataaaaaaatcttgtggtattcaatcaagact 44646800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 286 - 386
Target Start/End: Original strand, 5799891 - 5799990
Alignment:
Q  286 gggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactct 385  Q
    |||||||| ||||||||||| || ||||||| || |||||||||| ||| |||||| ||||  | || |||||||| ||| |||||||||||||||||||    
T  5799891 gggattttaaaagactttttaattatgaaaa-gttttgtggtattaaattaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagactct 5799989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 28100675 - 28100587
Alignment:
Q  254 actaagaggggtgtattggatcatgattctaagggattttcaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||| ||||||||||||||   ||||  ||||| |||| |||||||||||| || || |||||||||||||||||||||||||||||    
T  28100675 actaaggggggtgtattggattgggatttcaaggggttttaaaagactttttttattataaaaaagtcttgtggtattcaatcaagact 28100587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 24736336 - 24736416
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttg 346  Q
    |||||||||| | |||||||||| ||||| ||||| ||||| || ||||||  |||||||| ||||||||||||||||||||    
T  24736336 tgtattggattaggattctaaggaattttaaaagattttttaattatgaaat-gtcttgtgatattcaatcaagactctttg 24736416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 29855664 - 29855728
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatca 378  Q
    ||||||| ||||| |||| |||||||||| ||||||||||||||||| | ||||||||||||||||    
T  29855664 aaaaagttttgtg-tatttaatcaagactgtttgtcattttaaaaaaattttgaggtattcaatca 29855728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 260 - 341
Target Start/End: Original strand, 41761977 - 41762058
Alignment:
Q  260 aggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||||||||||||   |||| ||| ||||||| ||||||||| | || || |||||||||||||||||| ||||||||||    
T  41761977 aggggtgtattggattgagattttaaaggattttaaaagactttgtgattataaaaaagtcttgtggtattgaatcaagact 41762058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #115
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 27454407 - 27454335
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaat 334  Q
    |||| ||||||||||||||| ||||| ||||| ||||||| |||||| |||||||| | ||||| ||||||||    
T  27454407 gggtatattggatcatgattttaaggaattttaaaagactgttttataatgaaaaaattttgtgatattcaat 27454335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #116
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 265 - 337
Target Start/End: Complemental strand, 28847183 - 28847111
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 337  Q
    ||||||||||   |||| ||| ||||||| |||||||||||||| || ||||||||| |||||||||||||||    
T  28847183 tgtattggattgagattttaaaggattttaaaagacttttttataataaaaaagtctagtggtattcaatcaa 28847111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #117
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 267 - 383
Target Start/End: Original strand, 29855576 - 29855691
Alignment:
Q  267 tattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttga 366  Q
    |||||||| | ||||||| || ||||| ||||| ||||  || |||||||||||||||| |||||||| |||||| ||||  |||| |||||||| |||     
T  29855576 tattggattaggattctatggaattttaaaagatttttaaattatgaaaaagtcttgtgatattcaattaagactttttgcaatttaaaaaaagttttg- 29855674  T
Q  367 ggtattcaatcaagact 383  Q
     ||||| ||||||||||    
T  29855675 tgtatttaatcaagact 29855691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #118
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 8584091 - 8584012
Alignment:
Q  260 aggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    |||||||||||||||   ||||  || ||||||| ||||||||||||||  |  ||||||||||||||||||||||||||    
T  8584091 aggggtgtattggattgagatttcaaaggattttaaaagacttttttattttataaaagtcttgtggtattcaatcaaga 8584012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #119
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 434 - 493
Target Start/End: Original strand, 20021436 - 20021495
Alignment:
Q  434 aaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaatttta 493  Q
    |||||||||||||||||| |||||||| | |||||| ||||||||| || ||||||||||    
T  20021436 aaggattgtttaataaattagattttgctggattttatgggattttttaatgaaatttta 20021495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #120
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 53271933 - 53271988
Alignment:
Q  286 gggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||||| |||||||||||||  || ||||||||||||| |||||||||||||||    
T  53271933 gggattttaaaagacttttttaaaataaaaaagtcttgtgatattcaatcaagact 53271988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #121
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 3436531 - 3436601
Alignment:
Q  311 tgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 381  Q
    ||||||||||||||||||||||||||| |||||||   |||| |||||| | ||| | |||||||||||||    
T  3436531 tgaaaaagtcttgtggtattcaatcaaaactcttttcaatttaaaaaaaatattgtgttattcaatcaaga 3436601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #122
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 386
Target Start/End: Original strand, 41320788 - 41320833
Alignment:
Q  341 tctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||| |||||| |||||||||||| ||||||||||||||||||||    
T  41320788 tctttatcatttaaaaaaagtcttgtggtattcaatcaagactctt 41320833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #123
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 289 - 386
Target Start/End: Original strand, 41725041 - 41725138
Alignment:
Q  289 attttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||| ||||| ||||| || || ||||||||||||| ||||||||||||| | ||||  | || |||||| | ||| ||||||||||||| ||||||    
T  41725041 attttaaaagattttttaattataaaaaagtcttgtgatattcaatcaagattttttgcaacttaaaaaaaatattgtggtattcaatcaatactctt 41725138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #124
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 9163017 - 9163089
Alignment:
Q  314 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||| ||| |||||||||||||||||||||     | || |||||||||||| ||||||||||||||||||||    
T  9163017 aaaaatctcgtggtattcaatcaagactctcaacaacttaaaaaaagtcttgtggtattcaatcaagactctt 9163089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #125
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 544
Target Start/End: Complemental strand, 36728022 - 36727943
Alignment:
Q  464 gattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttttt 544  Q
    |||||||| ||||||| ||||||||||||| || |||||  ||||||||| | ||||||||||| ||  ||||||||||||    
T  36728022 gattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatg-agacatgagattttttgagattgttttttt 36727943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #126
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 41320802 - 41320834
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactcttt 345  Q
    |||||||||||||||||||||||||||||||||    
T  41320802 aaaaagtcttgtggtattcaatcaagactcttt 41320834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #127
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 305
Target Start/End: Complemental strand, 44775986 - 44775947
Alignment:
Q  266 gtattggatcatgattctaagggattttcaaagacttttt 305  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  44775986 gtattggatcatgattctaatggattttaaaagacttttt 44775947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #128
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 388
Target Start/End: Original strand, 40143822 - 40143860
Alignment:
Q  350 ttttaaaaaagtcttgaggtattcaatcaagactcttaa 388  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  40143822 ttttaaaaaagtctttaggtattcaatcaagacttttaa 40143860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #129
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 511 - 549
Target Start/End: Original strand, 49469411 - 49469448
Alignment:
Q  511 atgaaaacatgagatttcttaggattgtttttttcttct 549  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  49469411 atgaaaacatgagatttctta-gattgtttttttcttct 49469448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #130
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 388
Target Start/End: Original strand, 54509760 - 54509798
Alignment:
Q  350 ttttaaaaaagtcttgaggtattcaatcaagactcttaa 388  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  54509760 ttttaaaaaagtctttaggtattcaatcaagacttttaa 54509798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #131
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 542
Target Start/End: Complemental strand, 32684064 - 32684003
Alignment:
Q  481 tagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||| || ||||| |||||||||||||| ||||||||| ||  ||||||||||    
T  32684064 tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttattgagattgttttt 32684003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #132
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 386
Target Start/End: Complemental strand, 39479625 - 39479592
Alignment:
Q  353 taaaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||||||||||| ||||||||||||||||||||    
T  39479625 taaaaaagtcttgtggtattcaatcaagactctt 39479592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #133
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 53594113 - 53594161
Alignment:
Q  289 attttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 337  Q
    ||||| |||||||||||||| ||  ||||||||||||| ||||||||||    
T  53594113 attttaaaagacttttttattatagaaaagtcttgtggcattcaatcaa 53594161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 177; Significance: 4e-95; HSPs: 115)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 19452032 - 19451784
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||| ||||||||||||||||| |||        ||||||||||    
T  19452032 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggta 19451933  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19451932 ttcaaaatcattcaaatttcgaaggatcgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 19451833  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  19451832 gaaaacatgagatttcttatgattgtttttttctt-ttaagattttacta 19451784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 50192775 - 50192526
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt-tctagtggt 411  Q
    ||||| ||||||| ||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||| |||         |||||||||    
T  50192775 aaaaaatcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggt 50192676  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca 511  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  50192675 attcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 50192576  T
Q  512 tgaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  50192575 tgaaaacatgagattttttaggattgtttttttctt-ttaagattttacta 50192526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 45760234 - 45759985
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggt 411  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| || |||||||||||||||||||||||| |||        |||||||||    
T  45760234 aaaaagtcttgtgttattcaatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggt 45760135  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca 511  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| |    
T  45760134 attcaaaatcattcaaacttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttga 45760035  T
Q  512 tgaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45760034 tgaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 45759985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 321 - 562
Target Start/End: Original strand, 21222131 - 21222371
Alignment:
Q  321 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaat 420  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||||| ||||||||||||    
T  21222131 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaat 21222230  T
Q  421 cattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacat 520  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  21222231 cattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacat 21222330  T
Q  521 gagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||| ||||||| ||||||||||||||    
T  21222331 gagatttcttaggattgttattttctt-ttaagattttacta 21222371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 49198492 - 49198245
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||| ||| |||||||||| ||||||||||||| |||        |  |||||||    
T  49198492 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggta 49198394  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49198393 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 49198294  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  49198293 gaaaacatgatatttcttaggattgtttttttctt-ttaagattttacta 49198245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 28824596 - 28824349
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| | |||||||||| |||||||||||| |||||||||||||||||||||||| |||        ||| ||||||    
T  28824596 aaaaagtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggta 28824497  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||| |||||| ||    
T  28824496 ttcaaaatcattcaaatttcgaag-attgtttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttat 28824398  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28824397 aaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 28824349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 313 - 547
Target Start/End: Original strand, 45535920 - 45536160
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||| | |||||||||||| || ||||| ||| ||||||||||||||||||||||||||||        ||||||||||    
T  45535920 aaaaagtcttgtgttattcaatcaatattctttgtcatttaaacaaagtgttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggta 45536019  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45536020 ttcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 45536119  T
Q  513 ------gaaaacatgagatttcttaggattgtttttttctt 547  Q
          |||||||||||||||||||||||||||||||||||    
T  45536120 gaaaacgaaaacatgagatttcttaggattgtttttttctt 45536160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 35679352 - 35679102
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| |||||  ||||||||||||||||||||||| |||        ||  ||||||    
T  35679352 aaaaagtcttgtggtattcaatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggta 35679253  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||| |||||||||    
T  35679252 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcat 35679153  T
Q  513 gaaaacatgagatttcttaggattgtt--tttttcttcttaagattttacta 562  Q
    ||| ||||||||||||||| |||||||  |||||||| ||||||||||||||    
T  35679152 gaagacatgagatttcttaagattgtttctttttctt-ttaagattttacta 35679102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 313 - 540
Target Start/End: Original strand, 35279648 - 35279875
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||| |||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| |||||| |||        ||||||||||    
T  35279648 aaaaagacttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggta 35279747  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||| |||||||||    
T  35279748 ttcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcat 35279847  T
Q  513 gaaaacatgagatttcttaggattgttt 540  Q
    |||||||||||||||||||| |||||||    
T  35279848 gaaaacatgagatttcttagaattgttt 35279875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 313 - 562
Target Start/End: Complemental strand, 47654577 - 47654327
Alignment:
Q  313 aaaaagtctt-gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt-tctagtgg 410  Q
    |||||||||| ||| ||||||||||||| |||||||||||| ||| |||||||| ||||||||||||| |||||||||| |||         ||||||||    
T  47654577 aaaaagtctttgtgttattcaatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtgg 47654478  T
Q  411 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttc 510  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| || ||||    
T  47654477 tattcaaaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttc 47654378  T
Q  511 atgaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  47654377 atgaaaacatgagatttcttaggattgtttttttctt-ttaagattttacta 47654327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 313 - 561
Target Start/End: Complemental strand, 6304477 - 6304227
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga-ctcttaatcgcttnnnnnnnttctagtggt 411  Q
    |||||||  |||| ||||||||||||| |||||||||||| |||||||||||| ||||||||| ||| | ||||||||| |||        |||||||||    
T  6304477 aaaaagtactgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggt 6304378  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca 511  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6304377 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 6304278  T
Q  512 tgaaaacatgagatttcttaggattgtttttttct-tcttaagattttact 561  Q
    ||||||||||| |||||||| |||||||||||| | | |||||||||||||    
T  6304277 tgaaaacatgaaatttcttatgattgtttttttttcttttaagattttact 6304227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 47780687 - 47780935
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| | | |||||||| ||||||||| || |||||||||||||||||||||||| |||        ||||||| ||    
T  47780687 aaaaagtcttgtgttattcaatcaagattatatgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgata 47780786  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||| ||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| || ||||||    
T  47780787 ttcaaaatcattcaaaattaaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcat 47780886  T
Q  513 gaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  47780887 gaaaacatgagatttcttaagattgtttttttctt-ttaagattttacta 47780935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 272 - 561
Target Start/End: Complemental strand, 31572470 - 31572174
Alignment:
Q  272 gatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa-gtcttgaggta 370  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| |||  ||   |||| |||||| |||||| ||||    
T  31572470 gatcatgattctaagggattttaagagacttttttatcatgaaaaagtcttgtggtattcattcaaaacttcttccaatttaaaaaaaagtcttgtggta 31572371  T
Q  371 ttcaatcaagactcttaatcgcttnnnnnnn-------ttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgata 463  Q
    || ||| ||||||||||||| |||              |  | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  31572370 tttaattaagactcttaatcacttaaaaaaaagtcttgtggttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatg 31572271  T
Q  464 gattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgtttttttcttcttaagattttact 561  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||    
T  31572270 gattttgtgggattttatagtgaaattttaggatgaaaaagtctttcatgaaatcatgagatttcttagaattgtttttttctt-ttaagattttact 31572174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 312 - 544
Target Start/End: Original strand, 49418059 - 49418291
Alignment:
Q  312 gaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggt 411  Q
    |||||||||||||| ||||||||||||| || ||||||||| |||||| |  || |||||||||| ||||||||||||| |||        |||||||||    
T  49418059 gaaaaagtcttgtgttattcaatcaagattcattgtcatttaaaaaaaattatgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggt 49418158  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca 511  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||  |||||||    
T  49418159 attcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaaaaaatctttca 49418258  T
Q  512 tgaaaacatgagatttcttaggattgttttttt 544  Q
    |||||| |||||||||||||| ||| |||||||    
T  49418259 tgaaaatatgagatttcttagaatttttttttt 49418291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 6312550 - 6312779
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  6312550 aaaaagttttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 6312649  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  6312650 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 6312749  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  6312750 gaaaagatgagatttcttgagattgttttt 6312779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 29396612 - 29396383
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  29396612 aaaaaatcttttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 29396513  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  29396512 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 29396413  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  29396412 gaaaagatgagatttcttgagattgttttt 29396383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 317 - 542
Target Start/End: Original strand, 51701560 - 51701785
Alignment:
Q  317 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||||||    
T  51701560 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 51701659  T
Q  417 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaa 516  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||||||    
T  51701660 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 51701759  T
Q  517 acatgagatttcttaggattgttttt 542  Q
    | ||||||||| ||  ||||||||||    
T  51701760 agatgagattttttgagattgttttt 51701785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 25612133 - 25612362
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||  ||        ||| ||||||    
T  25612133 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggta 25612232  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||| ||||  ||||||| || ||||| |||||||||    
T  25612233 ttcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcat 25612332  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  25612333 gaaaagatgagatttcttgagattgttttt 25612362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 313 - 529
Target Start/End: Original strand, 46328018 - 46328234
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  46328018 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggta 46328117  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||||||||||||||| |||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  46328118 ttcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 46328217  T
Q  513 gaaaacatgagatttct 529  Q
     |||| || ||||||||    
T  46328218 aaaaagataagatttct 46328234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 313 - 543
Target Start/End: Original strand, 29556080 - 29556311
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| |||||||| |||| || |||| |||| |||||||||||| | |||||||||||||||||||||| |||        ||||||| ||    
T  29556080 aaaaagtcttgtgttattcaattaagattcattgttatttaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaaatctagtgtta 29556179  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||| |||||| |||||| ||    
T  29556180 ttcaaaatcattcaaatttcgaaagattgtttaataaattagattttgatggattttatgggattttctaatgaaattttagcttgaaaaagtcttttat 29556279  T
Q  513 gaaa-acatgagatttcttaggattgtttttt 543  Q
    |||| |||||||||||||||||||||||||||    
T  29556280 gaaacacatgagatttcttaggattgtttttt 29556311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 9577656 - 9577427
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||| |||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||| ||| || ||| |||        ||| ||| ||    
T  9577656 aaaaagtattgttgtattcaatcaagaccctttgtcattttaaaaaagtcttgagatattaaatcaaaactttttatcacttaaaaaaagtcttgtgata 9577557  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||| ||||||||| ||||||||||||||||||||| |||||||  ||||||||    
T  9577556 ttcaaaatcattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaaaaatctttcat 9577457  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    |||||||||||||||||| |||||||||||    
T  9577456 gaaaacatgagatttcttgggattgttttt 9577427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 15835277 - 15835048
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||  ||        ||| ||||||    
T  15835277 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggta 15835178  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||| | ||||||||||||||||||  ||||||||| |||||| ||||||||| ||||| ||||||| || ||||| |||||||||    
T  15835177 ttcaaaatcattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcat 15835078  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  15835077 gaaaagatgagatttcttgagattgttttt 15835048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 48177686 - 48177457
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | | || ||| |||        ||| ||||||    
T  48177686 aaaaaatcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggta 48177587  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  48177586 ttcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 48177487  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  48177486 gaaaagatgagatttcttgagattgttttt 48177457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 313 - 502
Target Start/End: Original strand, 730124 - 730314
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt-tctagtggt 411  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||         |||||||||    
T  730124 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggt 730223  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaa 502  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  730224 attcaaaatcattcaaatttcgacgaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 28387617 - 28387388
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  28387617 aaaaagtcttttggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggta 28387518  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||| ||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||  ||||||| ||  |||| |||||||||    
T  28387517 ttcaaattcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcat 28387418  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
     |||| ||||||||||||  ||||||||||    
T  28387417 aaaaagatgagatttcttgagattgttttt 28387388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 313 - 527
Target Start/End: Complemental strand, 32589177 - 32588963
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||| |||| |||||||||||||||||||||| |||||  | || | ||||| || ||||||||||||||||| ||| |||        ||| ||||||    
T  32589177 aaaaaatcttctggtattcaatcaagactctttatcattaaacaagaatcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggta 32589078  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||| |||| |||||||||    
T  32589077 ttcaaaatcattcaaattttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaattttagcataaaaaagtctttcat 32588978  T
Q  513 gaaaacatgagattt 527  Q
    |||||||||||||||    
T  32588977 gaaaacatgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 321 - 542
Target Start/End: Complemental strand, 9322716 - 9322495
Alignment:
Q  321 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaat 420  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||  ||        ||  ||||||||||||||    
T  9322716 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtattcaaaat 9322617  T
Q  421 cattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacat 520  Q
    ||||||||||| |||||||||||||||||||   |||||||| |||||| ||||||||| ||||| ||||||| || ||||| |||||||||||||| ||    
T  9322616 cattcaaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 9322517  T
Q  521 gagatttcttaggattgttttt 542  Q
    ||||||||||  ||||||||||    
T  9322516 gagatttcttgagattgttttt 9322495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 317 - 547
Target Start/End: Complemental strand, 37014860 - 37014630
Alignment:
Q  317 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattca 416  Q
    |||||||||||||||||| |||||||||||||||||  || |||||||| ||||||||||||| | |||| ||| |||        ||| ||| ||||||    
T  37014860 agtcttgtggtattcaattaagactctttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattca 37014761  T
Q  417 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaa 516  Q
    |||||||||||||||| || |||||||| ||||||   |||||||| |||||||| |||||||||||||||||||||||||||||| |||| |||| |||    
T  37014760 aaatcattcaaatttctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaa 37014661  T
Q  517 acatgagatttcttaggattgtttttttctt 547  Q
    ||||||||||||||| |||||||||| ||||    
T  37014660 acatgagatttcttaagattgtttttctctt 37014630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 265 - 542
Target Start/End: Complemental strand, 38536361 - 38536094
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    ||||||| || | |||| || |||||||| |||||||||||  | || ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  38536361 tgtattgaattaggattatatgggattttaaaagactttttatttataaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtttt 38536262  T
Q  365 gaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatag 464  Q
    ||||||||||||||||||| || ||  |||        ||| |||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||      
T  38536261 gaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgat-- 38536164  T
Q  465 attttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
            ||||||| ||||| ||||||| || ||||| |||||||||||||| ||||||||||||  ||||||||||    
T  38536163 --------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 38536094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 265 - 542
Target Start/End: Complemental strand, 38558579 - 38558312
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    ||||||| || | |||| || |||||||| |||||||||||  | || ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  38558579 tgtattgaattaggattatatgggattttaaaagactttttatttataaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtttt 38558480  T
Q  365 gaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatag 464  Q
    ||||||||||||||||||| || ||  |||        ||| |||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||      
T  38558479 gaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgat-- 38558382  T
Q  465 attttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
            ||||||| ||||| ||||||| || ||||| |||||||||||||| ||||||||||||  ||||||||||    
T  38558381 --------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 38558312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 313 - 508
Target Start/End: Original strand, 48524295 - 48524490
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| | |||||||||| |||||| || || |||||| |||||| |||||||||| |||        ||| ||| ||    
T  48524295 aaaaagtcttgtgttattcaatcaagattttttgtcatttaaaaaaattcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgata 48524394  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctt 508  Q
    ||||||||||||||||||| ||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||| |||||    
T  48524395 ttcaaaatcattcaaattttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 261 - 386
Target Start/End: Complemental strand, 19452168 - 19452043
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||   |||| |||||||    
T  19452168 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcttgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 19452069  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| ||||||||||||||||||||    
T  19452068 tcttgtggtattcaatcaagactctt 19452043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 261 - 381
Target Start/End: Complemental strand, 28824690 - 28824570
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||    
T  28824690 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaaag 28824591  T
Q  361 tcttgaggtattcaatcaaga 381  Q
    ||||| | |||||||||||||    
T  28824590 tcttgtgttattcaatcaaga 28824570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 313 - 460
Target Start/End: Original strand, 18798467 - 18798614
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  18798467 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 18798566  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 460  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  18798567 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 18798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 313 - 562
Target Start/End: Original strand, 33025488 - 33025726
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga-ctcttaatcgcttnnnnnnnttctagtggt 411  Q
    ||||||| ||||  ||||||||||||| |||||| |||||| ||||| ||||| ||||||||||||| | ||||||||| |||        ||| |||||    
T  33025488 aaaaagttttgtcttattcaatcaagattctttgacatttttaaaaattcttgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggt 33025587  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca 511  Q
    |||||||||||||||||||| |||||||||||||||| |||||||          |||||||||||||||| | ||||||||||||||||| ||||||||    
T  33025588 attcaaaatcattcaaattttgaaggattgtttaatacatcagat----------tttgtgggattttctaataaaattttagcatgaaaaagtctttca 33025677  T
Q  512 tgaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    |||||||||||||||||||| ||||| | ||||||| ||||||||||||||    
T  33025678 tgaaaacatgagatttcttatgattg-tgttttctt-ttaagattttacta 33025726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 260 - 386
Target Start/End: Complemental strand, 49198586 - 49198461
Alignment:
Q  260 aggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 359  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  49198586 aggggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt-tcaatttaaaaaa 49198488  T
Q  360 gtcttgaggtattcaatcaagactctt 386  Q
    |||||| | ||||||||||||| ||||    
T  49198487 gtcttgtgttattcaatcaagattctt 49198461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 953701 - 953826
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||| |||||||    
T  953701 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 953800  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  953801 tcttgtgttattcaatcaagattctt 953826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 313 - 451
Target Start/End: Original strand, 49230862 - 49231000
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  49230862 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 49230961  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaat 451  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  49230962 ttcaaaatcattcaaatttcgaaggattatttaataaat 49231000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 253 - 386
Target Start/End: Original strand, 22183244 - 22183377
Alignment:
Q  253 aactaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattt 352  Q
    ||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||    
T  22183244 aactaaggggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattt 22183343  T
Q  353 taaaaaagtcttgaggtattcaatcaagactctt 386  Q
     |||||||| ||| | ||||||||||||| ||||    
T  22183344 aaaaaaagttttgtgttattcaatcaagattctt 22183377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 255 - 386
Target Start/End: Complemental strand, 45760334 - 45760203
Alignment:
Q  255 ctaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttta 354  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||   |||| |    
T  45760334 ctaaggggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaaaactcttttcaatttaa 45760235  T
Q  355 aaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||||||||| | ||||||||||||| ||||    
T  45760234 aaaaagtcttgtgttattcaatcaagattctt 45760203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 29219264 - 29219481
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||| || ||| |||        ||| ||||||    
T  29219264 aaaaagtcttgtggtattcaatcaagactct--gtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 29219361  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||  |||||||||||||||||||  |||||||||          ||||||| ||||| ||||||| || ||||| || ||||||    
T  29219362 ttcaaaatcattcaaattaagaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtatttcat 29219451  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  29219452 gaaaagatgagatttcttgagattgttttt 29219481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 260 - 386
Target Start/End: Original strand, 35279553 - 35279679
Alignment:
Q  260 aggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 359  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||    
T  35279553 aggggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 35279652  T
Q  360 gtcttgaggtattcaatcaagactctt 386  Q
    | |||| | ||||||||||||| ||||    
T  35279653 gacttgtgttattcaatcaagattctt 35279679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 730031 - 730155
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||   |||| |||||||    
T  730031 ggggtgtattggatcatgattctaagggattttaaaagactttttt-tcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 730129  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  730130 tcttgtgttattcaatcaagattctt 730155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 316 - 526
Target Start/End: Complemental strand, 5495317 - 5495117
Alignment:
Q  316 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattc 415  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||        ||| |||||||||    
T  5495317 aagtcttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattc 5495218  T
Q  416 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaa 515  Q
    ||||||||| ||||||| ||||||| ||||||||||          | |||||||||||||||| ||||| ||||||| || ||||| ||| || |||||    
T  5495217 aaaatcatttaaatttcaaaggattatttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaa 5495128  T
Q  516 aacatgagatt 526  Q
    || ||||||||    
T  5495127 aagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 21222030 - 21222154
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||     
T  21222030 ggggtgtattggatcatgattctaagggattttaaaaggcttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt-tcaatttaaaaaaa 21222128  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
      ||| | ||||||||||||| ||||    
T  21222129 gtttgtgttattcaatcaagattctt 21222154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 258 - 386
Target Start/End: Complemental strand, 15835374 - 15835246
Alignment:
Q  258 agaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaa 357  Q
    |||||| |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||| ||||    
T  15835374 agagggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaa 15835275  T
Q  358 aagtcttgaggtattcaatcaagactctt 386  Q
    |||||||| ||||||||||||||||||||    
T  15835274 aagtcttgtggtattcaatcaagactctt 15835246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 262 - 386
Target Start/End: Complemental strand, 35679445 - 35679321
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    |||||||||| ||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||   |||| ||||||||    
T  35679445 gggtgtattgaatcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaaggctcttttcaatttaaaaaaagt 35679346  T
Q  362 cttgaggtattcaatcaagactctt 386  Q
    |||| ||||||||||||||| ||||    
T  35679345 cttgtggtattcaatcaagattctt 35679321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 256 - 386
Target Start/End: Original strand, 14494089 - 14494216
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||||||||||||||||||||||||||||   || ||||||||||||||||||||||| |||||||||||||||||||||||||||   |||| ||    
T  14494089 taaggggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaa 14494185  T
Q  356 aaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||| | ||||||||||||| ||||    
T  14494186 aaaagtcttgtgttattcaatcaagattctt 14494216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 25612043 - 25612164
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||| ||||||||||||||||||||||| ||||  |||| |||||||||||    
T  25612043 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 25612142  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  25612143 gtggtattcaatcaagactctt 25612164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 264 - 386
Target Start/End: Complemental strand, 47654669 - 47654545
Alignment:
Q  264 gtgtattggatcatgattctaagggattttcaaagactttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtc 362  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||   |||| |||||||||    
T  47654669 gtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcgatcaagactctttccaatttaaaaaaagtc 47654570  T
Q  363 -ttgaggtattcaatcaagactctt 386  Q
     ||| | ||||||||||||| ||||    
T  47654569 tttgtgttattcaatcaagattctt 47654545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 261 - 381
Target Start/End: Original strand, 49417966 - 49418086
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||   ||||  ||||||    
T  49417966 ggggtatattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtgatattcaatcaagactctttccaatttagaaaaag 49418065  T
Q  361 tcttgaggtattcaatcaaga 381  Q
    ||||| | |||||||||||||    
T  49418066 tcttgtgttattcaatcaaga 49418086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 261 - 381
Target Start/End: Complemental strand, 50192869 - 50192749
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||   |||| ||||||     
T  50192869 ggggtgtattgaatcatgattctaaggaattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagattctttccaatttaaaaaaaa 50192770  T
Q  361 tcttgaggtattcaatcaaga 381  Q
    ||||| | |||||||||||||    
T  50192769 tcttgtgttattcaatcaaga 50192749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 262 - 386
Target Start/End: Original strand, 47780502 - 47780629
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttt----aaaa 357  Q
    |||||||||||||||||||||||||  ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||    ||||    
T  47780502 gggtgtattggatcatgattctaagaaattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt-tcaatttaaaaaaaa 47780600  T
Q  358 aagtcttgaggtattcaatcaagactctt 386  Q
    || ||||| | ||||||||||||||||||    
T  47780601 aaatcttgtgttattcaatcaagactctt 47780629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 6312460 - 6312581
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||| |||||||| ||    
T  6312460 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtttt 6312559  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | |||||||||| |||||||||    
T  6312560 gtggtattcaattaagactctt 6312581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 261 - 341
Target Start/End: Complemental strand, 6304572 - 6304492
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  6304572 ggggtgtattggatcatgattctaaaggattttaaaagacttttttttcatgaaaaagtcttgtggtattcaatcaagact 6304492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 321 - 542
Target Start/End: Complemental strand, 48668988 - 48668780
Alignment:
Q  321 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaat 420  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||   | | || ||| |||        ||  ||||||||||||||    
T  48668988 ttgtgatattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatc---atttttcatcacttaaaaaaagtcacgtggtattcaaaat 48668892  T
Q  421 cattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacat 520  Q
     |||||||||||||| |||||||||||||||          | |||||||||||||| | ||||| ||||||| || ||||| |||||||||||||| ||    
T  48668891 tattcaaatttcgaaagattgtttaataaat----------tggattttgtgggattctgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 48668802  T
Q  521 gagatttcttaggattgttttt 542  Q
    ||||||| || |||||||||||    
T  48668801 gagatttgttgggattgttttt 48668780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 313 - 383
Target Start/End: Complemental strand, 8141352 - 8141282
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 383  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8141352 aaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 8141282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 8141442 - 8141321
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    ||||||| || | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  | || |||||||| ||    
T  8141442 tgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtttt 8141343  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  8141342 gtggtattcaatcaagactctt 8141321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 9322814 - 9322693
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||| ||||||   ||    
T  9322814 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaaaattt 9322715  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  9322714 gtggtattcaatcaagactctt 9322693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 29396702 - 29396581
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| || ||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||| |||||| ||||    
T  29396702 tgtattggattaggattctatggtattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaaatctt 29396603  T
Q  365 gaggtattcaatcaagactctt 386  Q
      ||||||||||||||||||||    
T  29396602 ttggtattcaatcaagactctt 29396581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 313 - 471
Target Start/End: Original strand, 45272563 - 45272719
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||        ||| ||||||    
T  45272563 aaaaaatcttgttgtattcaatcaaaactctttgtcatttt-aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatctcgtggta 45272661  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgt 471  Q
    |||||||| ||| ||||||||||||| ||||||||||||  |||||||  |||||||||    
T  45272662 ttcaaaattatttaaatttcgaagga-tgtttaataaattggattttgtgagattttgt 45272719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 49230772 - 49230893
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | |||| || |||||||| ||||||||||| || ||||||||||| |||||||||||||||||||| ||||  | || |||||||||||    
T  49230772 tgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaaattaaaaaaagtctt 49230871  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  49230872 gtggtattcaatcaagactctt 49230893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 265 - 385
Target Start/End: Original strand, 29219174 - 29219294
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | |||| || || ||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  | || |||||||||||    
T  29219174 tgtattggattaggattatatggaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 29219273  T
Q  365 gaggtattcaatcaagactct 385  Q
    | |||||||||||||||||||    
T  29219274 gtggtattcaatcaagactct 29219294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 267 - 386
Target Start/End: Complemental strand, 28387705 - 28387586
Alignment:
Q  267 tattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttga 366  Q
    |||||||| | ||||||| |||||||| ||||||||||| || ||||||||||||| |||||||||||||||||| ||||  |||| |||||||||||      
T  28387705 tattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaaagtctttt 28387606  T
Q  367 ggtattcaatcaagactctt 386  Q
    ||||||||||||||| ||||    
T  28387605 ggtattcaatcaagattctt 28387586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 268 - 386
Target Start/End: Original strand, 18798380 - 18798498
Alignment:
Q  268 attggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 367  Q
    ||||||| | ||||||| | |||||| ||||||||||| || ||||||| |||||||||||||||||||||||| ||||  | || |||||||||||| |    
T  18798380 attggattaggattctatgagattttaaaagactttttaattatgaaaatgtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtg 18798479  T
Q  368 gtattcaatcaagactctt 386  Q
    |||||||||||||||||||    
T  18798480 gtattcaatcaagactctt 18798498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 268 - 386
Target Start/End: Original strand, 46327931 - 46328049
Alignment:
Q  268 attggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 367  Q
    ||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||| ||||||||||| ||| ||||  | || |||||||||||| |    
T  46327931 attggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtgttattcaatcaaaactttttgcaacttaaaaaaagtcttgtg 46328030  T
Q  368 gtattcaatcaagactctt 386  Q
    |||||||||||||||||||    
T  46328031 gtattcaatcaagactctt 46328049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 261 - 337
Target Start/End: Original strand, 33025394 - 33025470
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 337  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||||||||||||    
T  33025394 ggggtgtattggatcatgattctaagagaatttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaa 33025470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 313 - 424
Target Start/End: Original strand, 22183346 - 22183457
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||| ||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||| |||||||| |||        ||||||||||    
T  22183346 aaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggta 22183445  T
Q  413 ttcaaaatcatt 424  Q
    ||||||||||||    
T  22183446 ttcaaaatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 267 - 381
Target Start/End: Original strand, 48524208 - 48524321
Alignment:
Q  267 tattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttga 366  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||| ||||||| |||  ||||||||||||||||||||   |||| ||||||||||||     
T  48524208 tattggatcatgattctaaggaattttaaaagacttttt-atcataaaaaagttttgcagtattcaatcaagactctttccaatttaaaaaaagtcttgt 48524306  T
Q  367 ggtattcaatcaaga 381  Q
    | |||||||||||||    
T  48524307 gttattcaatcaaga 48524321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 953795 - 953872
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatc 390  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||||| ||||||||||||||||    
T  953795 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaagactcttaatc 953872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 265 - 382
Target Start/End: Complemental strand, 9577746 - 9577629
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||| |||||||||| ||||||||||| || |||||||||| ||||||||||||||||||||| ||||  | || |||||||| ||    
T  9577746 tgtattggattaggattcgaagggattttaaaagactttttaatgatgaaaaagttttgtggtattcaatcaagactatttgcaacttaaaaaaagtatt 9577647  T
Q  365 gaggtattcaatcaagac 382  Q
    |  |||||||||||||||    
T  9577646 gttgtattcaatcaagac 9577629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 32589268 - 32589146
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtca--ttttaaaaaagtc 362  Q
    |||||||||| ||||||||| | |||||| ||| |||||||||||||||||||||  ||| |||||||||||||||||||| |||  ||| |||||| ||    
T  32589268 tgtattggattatgattctatgagattttaaaaaacttttttatcatgaaaaagttatgttgtattcaatcaagactcttt-tcaactttaaaaaaaatc 32589170  T
Q  363 ttgaggtattcaatcaagactctt 386  Q
    ||  ||||||||||||||||||||    
T  32589169 ttctggtattcaatcaagactctt 32589146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 48177776 - 48177655
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| |||   ||||| || |||||||||||||||||||||||||||||||| ||||  | || |||||| ||||    
T  48177776 tgtattggattaagattctatgggattttaaaatgttttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatctt 48177677  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||| ||||||    
T  48177676 gtggtattcaatcaatactctt 48177655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 410 - 501
Target Start/End: Original strand, 955823 - 955904
Alignment:
Q  410 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaa 501  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||          |||||||||||||||||||||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgat----------ggattttctagtgaaattttagcatgaaa 955904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 277 - 381
Target Start/End: Original strand, 29556006 - 29556106
Alignment:
Q  277 tgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaat 376  Q
    ||||||||||||||||| ||||||||||||||    ||||||| |||||||||||||||||||||||||   |||| |||||||||||| | ||||||||    
T  29556006 tgattctaagggattttaaaagacttttttat----aaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaat 29556101  T
Q  377 caaga 381  Q
     ||||    
T  29556102 taaga 29556106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 47784405 - 47784466
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  47784405 aaaaagtcttgtggtattcaatcaagactctttgtca-tttaaaaaagtcttgtggtattcaa 47784466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 5495410 - 5495289
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| | |||||| ||| ||||||| || ||||||||||| |||||||||||||||||||| ||||  | || ||  |||||||    
T  5495410 tgtattggattaggattctatgagattttaaaaaactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaacttaaaggaagtctt 5495311  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | |||||||||| |||||||||    
T  5495310 gtggtattcaattaagactctt 5495289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 45272473 - 45272594
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||| | |||||||||||||| |||||| ||||  | || |||||| ||||    
T  45272473 tgtattggattaagattctatgggattttaaaagactttttaattatgaaaaaatattgtggtattcaataaagactttttgcaacttaaaaaaaatctt 45272572  T
Q  365 gaggtattcaatcaagactctt 386  Q
    |  |||||||||||| ||||||    
T  45272573 gttgtattcaatcaaaactctt 45272594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 313 - 502
Target Start/End: Original strand, 47784363 - 47784541
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||||| ||||  | || |||||||||||| ||||||||||||||||||||  ||  ||        ||| ||||||    
T  47784363 aaaaagtcttgtgatattcaatcaagactttttgcaagttaaaaaaagtcttgtggtattcaatcaagactctttgtc-atttaaaaaagtcttgtggta 47784461  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaa 502  Q
    |||||||| ||||||| ||| || |||||||||||||||          | ||||||||| ||||||||||| |||||||||||||||||    
T  47784462 ttcaaaattattcaaacttctaaagattgtttaataaat----------tggattttgtgagattttctagttaaattttagcatgaaaa 47784541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 407 - 543
Target Start/End: Original strand, 51085865 - 51086000
Alignment:
Q  407 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtc 506  Q
    |||||||||||||| |||||||||| |||||||| || |||||||  |||||||||  ||||||||| ||||||| |||||||||||  ||||   | |     
T  51085865 gtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaattttaatatgattttttt 51085964  T
Q  507 tttcatgaaaacatgagatttcttaggattgtttttt 543  Q
    ||| ||||||| |||||||||  ||||||||||||||    
T  51085965 tttgatgaaaa-atgagattttctaggattgtttttt 51086000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 284 - 382
Target Start/End: Complemental strand, 19007641 - 19007543
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagac 382  Q
    |||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||| ||    | | |||| || ||||| ||||||||||||||||    
T  19007641 aagggattttaaaagacttttttataatgaaaaagtctagtggtattcaatcaagacttttataaaatgtaaacaaatcttgtggtattcaatcaagac 19007543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 313 - 386
Target Start/End: Complemental strand, 19452074 - 19452001
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||||||||||||||||||||||||||   |||| |||||||||||| | ||||||||||||| ||||    
T  19452074 aaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctt 19452001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 51701514 - 51701587
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||||| ||||||||||||||||||||| ||||  |||| |||| ||||||| ||||||||||||||||||||    
T  51701514 aaaaagttttgtggtattcaatcaagactttttgcaatttaaaaatagtcttgtggtattcaatcaagactctt 51701587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 267 - 346
Target Start/End: Original strand, 42290732 - 42290811
Alignment:
Q  267 tattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttg 346  Q
    |||||||| | ||||||| |||||||| ||||| ||||| || |||||||||||||||||||||||||||| ||| ||||    
T  42290732 tattggattaagattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaaaactttttg 42290811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 21222165 - 21222227
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||||||||||||||||||||||||  ||| || |||||||||| |||||||||||    
T  21222165 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaa 21222227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 284 - 382
Target Start/End: Original strand, 48194612 - 48194710
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagac 382  Q
    |||||||||| |||||||||||||  |||||||||||| ||||||||||||||||||| ||    | | |||| || ||||| ||||||||||||||||    
T  48194612 aagggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagacttttataaaatctaaacaaatcttgtggtattcaatcaagac 48194710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 284 - 382
Target Start/End: Original strand, 48203370 - 48203468
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagac 382  Q
    |||||||||| |||||||||||||  |||||||||||| ||||||||||||||||||| ||    | | |||| || ||||| ||||||||||||||||    
T  48203370 aagggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagacttttataaaatataaacaaatcttgtggtattcaatcaagac 48203468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 504 - 561
Target Start/End: Original strand, 48524809 - 48524865
Alignment:
Q  504 gtctttcatgaaaacatgagatttcttaggattgtttttttcttcttaagattttact 561  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  48524809 gtctttcatgaaaacatgagatttgttaggattggttttttctt-ttaagattttact 48524865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 14494185 - 14494237
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttg 365  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  14494185 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttg 14494237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 261 - 341
Target Start/End: Original strand, 42657713 - 42657793
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    ||||||||||||||   ||||  ||| |||||| ||||||||||| || || |||||||||||||||||||||||||||||    
T  42657713 ggggtgtattggattgagatttcaagagattttaaaagactttttaattataaaaaagtcttgtggtattcaatcaagact 42657793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 28541386 - 28541437
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatg 312  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||||||||||    
T  28541386 ggggtgtattggatcatgattctaagcgattttaaaagatttttttatcatg 28541437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 469
Target Start/End: Complemental strand, 31622586 - 31622527
Alignment:
Q  410 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagatttt 469  Q
    ||||||||||||||||||||||| || |||||||||||||||| |||||||  |||||||    
T  31622586 gtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttgtgagatttt 31622527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 427 - 529
Target Start/End: Original strand, 38319996 - 38320098
Alignment:
Q  427 aatttcgaaggattgtttaataaatcagattttgatagattttg-tgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagat 525  Q
    ||||| ||| ||||||||| |||||  ||||||||||||||||| |||| |||| ||||| ||||||||||  |||| |||||||||||||| |||| ||    
T  38319996 aattttgaatgattgtttactaaataggattttgatagattttgttgggtttttttagtg-aattttagcacaaaaaagtctttcatgaaaatatgatat 38320094  T
Q  526 ttct 529  Q
    ||||    
T  38320095 ttct 38320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 8141310 - 8141248
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||| ||||||||||||||||| ||  ||| || ||||||||||||||||||||||    
T  8141310 aaaaagtcttgaggtattcaatcaagactattcatcacttaaaaaaagtcttgaggtattcaa 8141248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 25831213 - 25831139
Alignment:
Q  272 gatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttg 346  Q
    |||||||||||||||| ||||| ||||||||||| || |||||||| |||| || |||||||| |||||| ||||    
T  25831213 gatcatgattctaaggaattttaaaagactttttaattatgaaaaaatcttttgatattcaattaagactttttg 25831139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 51701598 - 51701660
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||| ||||||||||||||||| ||  |||||| |||||||||||| |||||||||    
T  51701598 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 51701660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 51826898 - 51826841
Alignment:
Q  284 aagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||||||| ||||||||||| || || ||||| |||||||||||||||||||||||    
T  51826898 aagggattttaaaagactttttaataataaaaaaatcttgtggtattcaatcaagact 51826841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 262 - 337
Target Start/End: Original strand, 27198271 - 27198346
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 337  Q
    |||||||||||||   || | ||||||||||| |||||||||||  | || |||||||||||||||||||||||||    
T  27198271 gggtgtattggattgagactttaagggattttaaaagactttttgtttataaaaaagtcttgtggtattcaatcaa 27198346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 47780644 - 47780713
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcatttt--aaaaaagtcttgaggtattcaatcaaga 381  Q
    ||||||||||||| ||||||||||||||||||| ||| |||  |||||||||||| | |||||||||||||    
T  47780644 aaaaagtcttgtgttattcaatcaagactcttt-tcaatttaaaaaaaagtcttgtgttattcaatcaaga 47780713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 14555370 - 14555316
Alignment:
Q  287 ggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    ||||||| |||||||||||||| || ||||||| | |||||||||||||||||||    
T  14555370 ggattttaaaagacttttttataataaaaaagtttggtggtattcaatcaagact 14555316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 51085704 - 51085768
Alignment:
Q  321 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactct 385  Q
    ||||||||||||||||||||||||||  |  | |||||||| ||| |||||||||| ||||||||    
T  51085704 ttgtggtattcaatcaagactctttgcaacataaaaaaagttttgtggtattcaataaagactct 51085768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 388
Target Start/End: Original strand, 10896845 - 10896884
Alignment:
Q  349 attttaaaaaagtcttgaggtattcaatcaagactcttaa 388  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  10896845 attttaaaaaagtctttaggtattcaatcaagacttttaa 10896884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 337
Target Start/End: Original strand, 19893451 - 19893526
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaa 337  Q
    |||||||||| || | |||| ||||||||||| ||||||||||| || || ||||| |||||  ||||||||||||    
T  19893451 gggtgtattgaattaagattttaagggattttaaaagactttttaatgataaaaaaatcttggagtattcaatcaa 19893526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 341
Target Start/End: Original strand, 34772311 - 34772390
Alignment:
Q  262 gggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||||||||||  |||||  || ||||||| |||||||||||||  || ||||||| | ||||||||| |||||||||    
T  34772311 gggtgtattggattgtgatttcaaaggattttaaaagacttttttaaaataaaaaagtttggtggtattcgatcaagact 34772390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 388
Target Start/End: Complemental strand, 1928442 - 1928404
Alignment:
Q  350 ttttaaaaaagtcttgaggtattcaatcaagactcttaa 388  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  1928442 ttttaaaaaagtctttaggtattcaatcaagacttttaa 1928404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 5495278 - 5495216
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||| ||||||||||||||||| ||  ||| || |||||||||| | |||||||||    
T  5495278 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaa 5495216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 9322682 - 9322620
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 375  Q
    ||||||||||| ||||||| ||||||||| ||  |||||| ||||||||| || |||||||||    
T  9322682 aaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtattcaa 9322620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 388
Target Start/End: Original strand, 36402293 - 36402331
Alignment:
Q  350 ttttaaaaaagtcttgaggtattcaatcaagactcttaa 388  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  36402293 ttttaaaaaagtctttaggtattcaatcaagacttttaa 36402331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 359
Target Start/End: Complemental strand, 44290148 - 44290102
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 359  Q
    ||||||||||||  |||||||| ||||||||||||||||| ||||||    
T  44290148 aaaaagtcttgtaatattcaataaagactctttgtcatttaaaaaaa 44290102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 45535886 - 45535944
Alignment:
Q  321 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 379  Q
    ||||| |||||||||||||||||||   |||| |||||||||||| | |||||||||||    
T  45535886 ttgtgatattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaa 45535944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 47780598 - 47780675
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcatttt-----aaaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||| ||||||| ||||||||||||||||||| ||| |||     |||||||||||| | ||||||||||||||||||    
T  47780598 aaaaaatcttgtgttattcaatcaagactcttt-tcaatttaaaaaaaaaaagtcttgtgttattcaatcaagactctt 47780675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 562
Target Start/End: Original strand, 730307 - 730357
Alignment:
Q  510 catgaaaacatgagatttcttaggattgtttttttcttcttaagattttacta 562  Q
    ||||||||||||||||||||||||  | |||||||| | ||||||||||||||    
T  730307 catgaaaacatgagatttcttagg--tttttttttccttttaagattttacta 730357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 341
Target Start/End: Complemental strand, 14229137 - 14229056
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagactt-ttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    |||||||||| |||  |||||  |||||||||| |||||||| ||||||  | ||||||| | |||||||||||||||||||    
T  14229137 ggggtgtatttgattgtgatttcaagggattttaaaagactttttttatagtaaaaaagtttagtggtattcaatcaagact 14229056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 542
Target Start/End: Original strand, 18798615 - 18798676
Alignment:
Q  481 tagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||| || ||||| |||||||||||||| |||||||||||   ||||||||||    
T  18798615 tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctagagattgttttt 18798676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 359
Target Start/End: Complemental strand, 25831117 - 25831084
Alignment:
Q  326 gtattcaatcaagactctttgtcattttaaaaaa 359  Q
    ||||||||||||| ||||||||||||||||||||    
T  25831117 gtattcaatcaaggctctttgtcattttaaaaaa 25831084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 151; Significance: 1e-79; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 355 - 562
Target Start/End: Complemental strand, 38786 - 38581
Alignment:
Q  355 aaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 454  Q
    ||||||||||| |||||||||||||||||||||||| |||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38786 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa-tcag 38688  T
Q  455 attttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgtttttttcttcttaaga 554  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38687 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttctt-ttaaga 38589  T
Q  555 ttttacta 562  Q
    ||||||||    
T  38588 ttttacta 38581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 255 - 375
Target Start/End: Complemental strand, 38844 - 38724
Alignment:
Q  255 ctaagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcatttta 354  Q
    |||||| |||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||  ||| || |    
T  38844 ctaagaagggtgtattggatcatgattctaagggattttaaaagatatttttatcatgaaaaagtcttgtggtattcaatcaagactcttaatcacttaa 38745  T
Q  355 aaaaagtcttgaggtattcaa 375  Q
    ||||||||| | |||||||||    
T  38744 aaaaagtctagtggtattcaa 38724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 151; Significance: 1e-79; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 313 - 544
Target Start/End: Original strand, 100194 - 100425
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||| ||||||||||||||||||| |||        ||||||||||    
T  100194 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggta 100293  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| || ||||| |||||||||    
T  100294 ttcaaaatcattcaaatttcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcat 100393  T
Q  513 gaaaacatgagatttcttaggattgttttttt 544  Q
    |||||||||||||||||||||| |||||||||    
T  100394 gaaaacatgagatttcttaggactgttttttt 100425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 100100 - 100225
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 360  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||| || ||||   |||| |||||||    
T  100100 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttctgatattcaatcaacacactttccaatttaaaaaaag 100199  T
Q  361 tcttgaggtattcaatcaagactctt 386  Q
    ||||| | ||||||||||||| ||||    
T  100200 tcttgtgttattcaatcaagattctt 100225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 139; Significance: 2e-72; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 313 - 544
Target Start/End: Complemental strand, 763 - 532
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||| ||| ||||||||||||| |||||||||| |||       || ||||||||    
T  763 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtattgtggtattcaatcaaaactcttaatcacttaaattttttttagtggta 664  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||| | ||||||| |||||| |     
T  663 ttcaaaatcattcaaatttggaaggattgtttaataaatcatattttgatggattttgtggaattttctagtgaaattttggtatgaaaaagtctttgac 564  T
Q  513 gaaaacatgagatttcttaggattgttttttt 544  Q
    |||||||||||||||||||||||| |||||||    
T  563 gaaaacatgagatttcttaggatttttttttt 532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 386
Target Start/End: Complemental strand, 806 - 732
Alignment:
Q  312 gaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    ||||||||||||||||||||||||||||||||||   |||| |||||||||||| | ||||||||||||| ||||    
T  806 gaaaaagtcttgtggtattcaatcaagactctttacaatttaaaaaaagtcttgtgttattcaatcaagattctt 732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 125; Significance: 5e-64; HSPs: 2)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 313 - 542
Target Start/End: Original strand, 10543 - 10772
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||  ||        ||| ||||||    
T  10543 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggta 10642  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||||||| ||||||||||||||||||   |||||||| |||||| ||||||||| ||||| ||||||| || ||||| |||||||||    
T  10643 ttcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcat 10742  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| ||||||||||||  ||||||||||    
T  10743 gaaaagatgagatttcttgagattgttttt 10772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 10453 - 10574
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||| |||||||||||    
T  10453 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 10552  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  10553 gtggtattcaatcaagactctt 10574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 116; Significance: 1e-58; HSPs: 2)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 313 - 544
Target Start/End: Original strand, 846 - 1077
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnt-tctagtggt 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| || ||| |||         ||| |||||    
T  846 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggt 945  T
Q  412 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttca 511  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||||||||| |||||||||||||||| ||||| ||||||| |  ||||| ||||||||    
T  946 attcaaaatcattcaaatttcgaagaattatttaataaat-agattttgatggattttgtgggattttgtagtgtaattttaactagaaaaagtctttca 1044  T
Q  512 tgaaaacatgagatttcttaggattgttttttt 544  Q
    | |||| ||||||||||||  ||||||||||||    
T  1045 ttaaaatatgagatttcttgagattgttttttt 1077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 756 - 877
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || |||||||| ||||||||||||||||||||||| ||||  | || |||||||||||    
T  756 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaattcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 855  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  856 gtggtattcaatcaagactctt 877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 115; Significance: 4e-58; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 256 - 542
Target Start/End: Original strand, 13808 - 14084
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||| |||||||||| | ||||||| | |||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  13808 taagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 13907  T
Q  356 aaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga 455  Q
    |||||| ||||||||||||||||||||| || ||| |||        ||| |||||||||||||||||||||||||| || |||||||||||||||  ||    
T  13908 aaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattgga 14007  T
Q  456 ttttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    ||||||| ||||||||          ||||  ||||||  | ||||| |||||||||||||| ||||||||||||  ||||||||||    
T  14008 ttttgatggattttgt----------agtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 14084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 115; Significance: 4e-58; HSPs: 3)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 256 - 471
Target Start/End: Complemental strand, 21519 - 21304
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 355  Q
    |||| ||| |||||||||| | ||||||| | |||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  21519 taagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaa 21420  T
Q  356 aaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcaga 455  Q
    |||||| ||||||||||||||||||||| || ||| |||        ||| |||||||||||||||||||||||||| || |||||||||||||||  ||    
T  21419 aaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattgga 21320  T
Q  456 ttttgatagattttgt 471  Q
    ||||||| ||||||||    
T  21319 ttttgatggattttgt 21304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 498 - 542
Target Start/End: Complemental strand, 21287 - 21243
Alignment:
Q  498 gaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    ||||| |||||||||||||| ||||||||||||  ||||||||||    
T  21287 gaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 21243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 498 - 542
Target Start/End: Original strand, 28510 - 28554
Alignment:
Q  498 gaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    ||||| |||||||||||||| ||||||||||||  ||||||||||    
T  28510 gaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 28554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 109; Significance: 2e-54; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 313 - 542
Target Start/End: Complemental strand, 39841 - 39612
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| | || ||| |||        ||  ||||||    
T  39841 aaaaagttttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaactattcaatcaagatttttcatcacttaaaaaatgtcatgtggta 39742  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcat 512  Q
    |||||||||||||||| ||||||||||| ||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  39741 ttcaaaatcattcaaacttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 39642  T
Q  513 gaaaacatgagatttcttaggattgttttt 542  Q
    ||||| || |||||||||  ||||||||||    
T  39641 gaaaagataagatttcttgagattgttttt 39612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 278 - 386
Target Start/End: Complemental strand, 39918 - 39810
Alignment:
Q  278 gattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatc 377  Q
    ||||||| | |||||| |||||| |||| || |||||||||||||||||||||||||||||||| |||   | || |||||||| ||| |||||||||||    
T  39918 gattctatgagattttaaaagaccttttaattatgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaaagttttgtggtattcaatc 39819  T
Q  378 aagactctt 386  Q
    |||||||||    
T  39818 aagactctt 39810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 107; Significance: 3e-53; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 265 - 542
Target Start/End: Complemental strand, 58348 - 58071
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | ||||| | |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| |||| ||  |||||||||||||    
T  58348 tgtattggattaggattccatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttg-caacttaaaaaagtctt 58250  T
Q  365 gaggtattcaatcaagactctta-atcgcttnnnnnnn-ttctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 462  Q
    | |||||||| |||||||| ||  ||| |||        |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||    
T  58249 gtggtattcagtcaagactttttcatcacttaaaaaaagttct-gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgat 58151  T
Q  463 agattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
     |||||||||||||||| ||||  ||||||| || || ||  ||||||||||||| ||||||||||||  ||||||||||    
T  58150 ggattttgtgggattttgtagtataattttaacaagagaaaatctttcatgaaaagatgagatttcttgagattgttttt 58071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 90; Significance: 4e-43; HSPs: 2)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 313 - 467
Target Start/End: Original strand, 4183 - 4337
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactcttaatcgcttnnnnnnnttctagtggta 412  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||  ||        ||| ||||||    
T  4183 aaaaagtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 4282  T
Q  413 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagatt 467  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||| ||||    
T  4283 ttcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 4093 - 4214
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 364  Q
    |||||||||| | |||||||  ||||||| ||||||||||| ||  ||||||||||||||||||||||||||||||| ||||  | || |||||||||||    
T  4093 tgtattggattaggattctataggattttaaaagactttttaattttgaaaaagtcttgtggtattcaatcaagactttttgcaaattaaaaaaagtctt 4192  T
Q  365 gaggtattcaatcaagactctt 386  Q
    | ||||||||||||||||||||    
T  4193 gtggtattcaatcaagactctt 4214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 76; Significance: 8e-35; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 409 - 544
Target Start/End: Complemental strand, 37035 - 36900
Alignment:
Q  409 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctt 508  Q
    |||||||||||||||| ||||||||||| ||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| |||||    
T  37035 ggtattcaaaatcattaaaatttcgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 36936  T
Q  509 tcatgaaaacatgagatttcttaggattgttttttt 544  Q
    ||||||||| || |||||||||  ||||||| ||||    
T  36935 tcatgaaaagataagatttcttgagattgttctttt 36900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 37133 - 37027
Alignment:
Q  269 ttggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagg 368  Q
    |||||| | |||| || |||||||| ||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37133 ttggattaggattatatgggattttaaaagactttttaattatgaaaaagtcttgtgctattcaatcaagactctttgtcattttaaaaaagtcttgagg 37034  T
Q  369 tattcaa 375  Q
    |||||||    
T  37033 tattcaa 37027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 264 - 386
Target Start/End: Original strand, 8654 - 8776
Alignment:
Q  264 gtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtct 363  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||| |||   |||| ||||||||||    
T  8654 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaaaaaagtct 8753  T
Q  364 tgaggtattcaatcaagactctt 386  Q
    || | |||| |||||||| ||||    
T  8754 tgtgttatttaatcaagattctt 8776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 8745 - 8793
Alignment:
Q  313 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagt 361  Q
    ||||||||||||| |||| |||||||| |||||||||||| ||||||||    
T  8745 aaaaagtcttgtgttatttaatcaagattctttgtcatttaaaaaaagt 8793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 60; Significance: 3e-25; HSPs: 5)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 233719 - 233786
Alignment:
Q  312 gaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  233719 gaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaa 233786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 234567 - 234634
Alignment:
Q  312 gaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  234567 gaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaa 234634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 222551 - 222618
Alignment:
Q  312 gaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 379  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||    
T  222551 gaaaaagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttaaggtcttcaatcaa 222618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 320 - 386
Target Start/End: Original strand, 233685 - 233751
Alignment:
Q  320 cttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||||||||||||||| ||||  | ||  ||||||||||| ||||||||||||||||||||    
T  233685 cttgtggtattcaatcaagactttttgcaacttagaaaaagtcttgtggtattcaatcaagactctt 233751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 320 - 386
Target Start/End: Original strand, 234533 - 234599
Alignment:
Q  320 cttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactctt 386  Q
    |||||||||||||||||||||| ||||  | ||  ||||||||||| ||||||||||||||||||||    
T  234533 cttgtggtattcaatcaagactttttgcaacttagaaaaagtcttgtggtattcaatcaagactctt 234599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 464 - 542
Target Start/End: Original strand, 14894 - 14972
Alignment:
Q  464 gattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttcttaggattgttttt 542  Q
    |||||||||||||||| ||||| ||||||| || ||||| |||||||||||||| ||||||||||||| ||||||||||    
T  14894 gattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattgttttt 14972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 14788 - 14869
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttg 346  Q
    ||||||||||   ||||||| | |||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||    
T  14788 tgtattggatttggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttg 14869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 431 - 542
Target Start/End: Complemental strand, 3798 - 3687
Alignment:
Q  431 tcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaatgtctttcatgaaaacatgagatttctt 530  Q
    ||||| |||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||| ||||||||| |||| || | |||| ||    
T  3798 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatatttttt 3699  T
Q  531 aggattgttttt 542  Q
      ||||||||||    
T  3698 gagattgttttt 3687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 278 - 386
Target Start/End: Original strand, 199730 - 199838
Alignment:
Q  278 gattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatc 377  Q
    |||| ||||||||||  ||||| |||||||  || ||||||||||||||||| |||| |||||||||||| | || |||||||||||  |||||| ||||    
T  199730 gattttaagggatttcaaaagagttttttagtattaaaaagtcttgtggtatccaattaagactctttgtaacttaaaaaaagtcttttggtatttaatc 199829  T
Q  378 aagactctt 386  Q
    | |||||||    
T  199830 atgactctt 199838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 410 - 494
Target Start/End: Original strand, 199905 - 199989
Alignment:
Q  410 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttag 494  Q
    ||||| |||||||||||||||| ||| || ||||||||||||   |||||||| ||||||||| |||||| |||||||| |||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtgaaactttag 199989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 11849 - 11793
Alignment:
Q  285 agggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 341  Q
    ||||||||| |||||||||||||| || ||||||||||||| |||||||||||||||    
T  11849 agggattttaaaagacttttttattataaaaaagtcttgtgatattcaatcaagact 11793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 12094 - 12030
Alignment:
Q  258 agaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtctt 322  Q
    |||||| |||||||||| | ||||||| |||||||| ||||||||||| || |||||||||||||    
T  12094 agagggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtctt 12030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 11999 - 12056
Alignment:
Q  265 tgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtctt 322  Q
    |||||||||| | ||||||| |||||||| ||||||||||| || || ||||||||||    
T  11999 tgtattggattaggattctatgggattttaaaagactttttcataattaaaaagtctt 12056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 81872 - 81789
Alignment:
Q  256 taagaggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    |||| ||||||||||||||   |||| ||| ||||||| |||||||||||| |  |  ||||||||||||||||||||||||||    
T  81872 taaggggggtgtattggattgagattttaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaga 81789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 1970 - 1892
Alignment:
Q  261 ggggtgtattggatcatgattctaagggattttcaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 339  Q
    ||||||||||| |||| |||| |||| |||||| ||||||||||| || || ||||| | | |||||||||||| ||||    
T  1970 ggggtgtattgaatcaagattttaagagattttaaaagactttttaataataaaaaaatttggtggtattcaattaaga 1892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University